mRNA_H-canaliculatus_F_contig11931.1696.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig11931.1696.1
Unique NamemRNA_H-canaliculatus_F_contig11931.1696.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig11931.1696.1 vs. uniprot
Match: D7G5D8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5D8_ECTSI)

HSP 1 Score: 258 bits (659), Expect = 1.560e-79
Identity = 196/247 (79.35%), Postives = 204/247 (82.59%), Query Frame = 1
Query:  277 LWPYTADLVDGILAGNRTSLSRAITLVESHRLDHRRQAELLLDRVLSVRQEATLAPVPPPRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSAGAVLGDPLRLGMRLGIAGPPGAGKSSFIEVLGKSLTTAGNRVAVISIDPSSIRTGGSILGDKTRMHELSRDPRRVGEAFVRGCPARGVLGGISRYTHDVVLLCQVAGYDPVIVETVGLGQNEV 1017
            LWP TADLVDGILAG+R SLSRAITLVESHRLDHRRQAELLLDR+LS R +A     P    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX               G   A  G   +LGMRLGIAGPPGAGKSSFIEVLGK LT+AGNRVAVISIDPSS+RTGGSILGDKTRM ELSRDP     AFVRGCPARGVLGG+SRYTH+VVLLCQVAGYDPVIVETVGLGQNEV
Sbjct:  123 LWPSTADLVDGILAGSRASLSRAITLVESHRLDHRRQAELLLDRLLSARHQAG---APXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAEGLASSGRRDCSSGRLVAATGGFPKLGMRLGIAGPPGAGKSSFIEVLGKRLTSAGNRVAVISIDPSSLRTGGSILGDKTRMDELSRDP----SAFVRGCPARGVLGGLSRYTHEVVLLCQVAGYDPVIVETVGLGQNEV 362          
BLAST of mRNA_H-canaliculatus_F_contig11931.1696.1 vs. uniprot
Match: W2NS63_PHYPR (LAO/AO transport system ATPase, variant 6 n=5 Tax=Phytophthora parasitica TaxID=4792 RepID=W2NS63_PHYPR)

HSP 1 Score: 171 bits (433), Expect = 3.350e-47
Identity = 109/260 (41.92%), Postives = 138/260 (53.08%), Query Frame = 1
Query:  262 ASARRLWPYTADLVDGILAGNRTSLSRAITLVESHRLDHRRQAELLLDRVLSVRQEATLAPVPPPRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSAGAVLGDPLRLGMRLGIAGPPGAGKSSFIEVLGKSLTTAGNRVAVISIDPSSIRTGGSILGDKTRMHELSRDPRRVGEAFVRGCPARGVLGGISRYTHDVVLLCQVAGYDPVIVETVGLGQNEVPIFVCVDI 1041
            A  R + P T  LV+G+L GNRT+LSR+ITLVES       QAELLLD VL+ R+    A V PP                                                                            RLGIAGPPGAGKS+FIE LG  LT  G++VAV++IDPSS R+GGSILGDKTRM +LS DP     AFVR  P+RG LGG++++T+++VLLC+  GYD ++VE+VGLGQ+E+ I   VD+
Sbjct:   29 APTREMRPMTQRLVEGVLQGNRTALSRSITLVESTLKSDEEQAELLLDSVLTQRRSLRPAHVDPPELTS-----------------------------------------------------------------------FRLGIAGPPGAGKSTFIETLGLFLTAQGHKVAVLAIDPSSSRSGGSILGDKTRMEKLSNDPN----AFVRPSPSRGTLGGVAQHTNEIVLLCEAGGYDIILVESVGLGQSEIVIDDTVDM 213          
BLAST of mRNA_H-canaliculatus_F_contig11931.1696.1 vs. uniprot
Match: W2HAL9_PHYPR (LAO/AO transport system ATPase, variant 4 n=5 Tax=Phytophthora parasitica TaxID=4792 RepID=W2HAL9_PHYPR)

HSP 1 Score: 171 bits (433), Expect = 3.760e-47
Identity = 109/260 (41.92%), Postives = 138/260 (53.08%), Query Frame = 1
Query:  262 ASARRLWPYTADLVDGILAGNRTSLSRAITLVESHRLDHRRQAELLLDRVLSVRQEATLAPVPPPRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSAGAVLGDPLRLGMRLGIAGPPGAGKSSFIEVLGKSLTTAGNRVAVISIDPSSIRTGGSILGDKTRMHELSRDPRRVGEAFVRGCPARGVLGGISRYTHDVVLLCQVAGYDPVIVETVGLGQNEVPIFVCVDI 1041
            A  R + P T  LV+G+L GNRT+LSR+ITLVES       QAELLLD VL+ R+    A V PP                                                                            RLGIAGPPGAGKS+FIE LG  LT  G++VAV++IDPSS R+GGSILGDKTRM +LS DP     AFVR  P+RG LGG++++T+++VLLC+  GYD ++VE+VGLGQ+E+ I   VD+
Sbjct:   29 APTREMRPMTQRLVEGVLQGNRTALSRSITLVESTLKSDEEQAELLLDSVLTQRRSLRPAHVDPPELTS-----------------------------------------------------------------------FRLGIAGPPGAGKSTFIETLGLFLTAQGHKVAVLAIDPSSSRSGGSILGDKTRMEKLSNDPN----AFVRPSPSRGTLGGVAQHTNEIVLLCEAGGYDIILVESVGLGQSEIVIDDTVDM 213          
BLAST of mRNA_H-canaliculatus_F_contig11931.1696.1 vs. uniprot
Match: W2LL69_PHYPR (LAO/AO transport system ATPase, variant 3 n=6 Tax=Phytophthora parasitica TaxID=4792 RepID=W2LL69_PHYPR)

HSP 1 Score: 171 bits (433), Expect = 1.770e-46
Identity = 109/260 (41.92%), Postives = 138/260 (53.08%), Query Frame = 1
Query:  262 ASARRLWPYTADLVDGILAGNRTSLSRAITLVESHRLDHRRQAELLLDRVLSVRQEATLAPVPPPRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSAGAVLGDPLRLGMRLGIAGPPGAGKSSFIEVLGKSLTTAGNRVAVISIDPSSIRTGGSILGDKTRMHELSRDPRRVGEAFVRGCPARGVLGGISRYTHDVVLLCQVAGYDPVIVETVGLGQNEVPIFVCVDI 1041
            A  R + P T  LV+G+L GNRT+LSR+ITLVES       QAELLLD VL+ R+    A V PP                                                                            RLGIAGPPGAGKS+FIE LG  LT  G++VAV++IDPSS R+GGSILGDKTRM +LS DP     AFVR  P+RG LGG++++T+++VLLC+  GYD ++VE+VGLGQ+E+ I   VD+
Sbjct:   29 APTREMRPMTQRLVEGVLQGNRTALSRSITLVESTLKSDEEQAELLLDSVLTQRRSLRPAHVDPPELTS-----------------------------------------------------------------------FRLGIAGPPGAGKSTFIETLGLFLTAQGHKVAVLAIDPSSSRSGGSILGDKTRMEKLSNDPN----AFVRPSPSRGTLGGVAQHTNEIVLLCEAGGYDIILVESVGLGQSEIVIDDTVDM 213          
BLAST of mRNA_H-canaliculatus_F_contig11931.1696.1 vs. uniprot
Match: A0A5D6Y0Y2_9STRA (AAA domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0Y2_9STRA)

HSP 1 Score: 172 bits (435), Expect = 3.590e-46
Identity = 112/260 (43.08%), Postives = 142/260 (54.62%), Query Frame = 1
Query:  262 ASARRLWPYTADLVDGILAGNRTSLSRAITLVESHRLDHRRQAELLLDRVLSVRQEATLAPVPPPRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSAGAVLGDPLRLGMRLGIAGPPGAGKSSFIEVLGKSLTTAGNRVAVISIDPSSIRTGGSILGDKTRMHELSRDPRRVGEAFVRGCPARGVLGGISRYTHDVVLLCQVAGYDPVIVETVGLGQNEVPIFVCVDI 1041
            A A+++ P T  LVDG+LAGNRT+LSR+ITLVES      +QAELLLD VL+ R+EA                                                                            G P     R+GIAGPPGAGKS+FIE LG+ LT   ++VAV++IDPSS RTGGSILGDKTRM  LS DP     AFVR  P+RG LGG++++T+D+VLLC+ AGYD ++VE+VGLGQ+E+ I   VD+
Sbjct:   29 AGAQQMRPETQRLVDGVLAGNRTALSRSITLVESSLKSDEQQAELLLDAVLTHRREANA--------------------------------------------------------------------KEKEFRGLPT---FRVGIAGPPGAGKSTFIETLGQFLTAKNHKVAVLAIDPSSSRTGGSILGDKTRMTYLSNDPH----AFVRPSPSRGTLGGVAQHTNDIVLLCEAAGYDIILVESVGLGQSEIVIDDTVDM 213          
BLAST of mRNA_H-canaliculatus_F_contig11931.1696.1 vs. uniprot
Match: H3GW23_PHYRM (AAA domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=H3GW23_PHYRM)

HSP 1 Score: 167 bits (424), Expect = 1.150e-44
Identity = 109/259 (42.08%), Postives = 137/259 (52.90%), Query Frame = 1
Query:  265 SARRLWPYTADLVDGILAGNRTSLSRAITLVESHRLDHRRQAELLLDRVLSVRQEATLAPVPPPRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSAGAVLGDPLRLGMRLGIAGPPGAGKSSFIEVLGKSLTTAGNRVAVISIDPSSIRTGGSILGDKTRMHELSRDPRRVGEAFVRGCPARGVLGGISRYTHDVVLLCQVAGYDPVIVETVGLGQNEVPIFVCVDI 1041
            + R + P T  L DG+L GNRT+LSR+ITLVES       QAELLLD VL+ R+      V                                                                 SAG           RLGIAGPPGAGKS+FIE LG+ LT  G++VAV++IDPSS R+GGSILGDKTRM +LS DP     AFVR  P RG LGG++++T+D+VLLC+  GYD ++VE+VGLGQ+E+ I   VD+
Sbjct:   22 ATREMQPKTQRLADGVLDGNRTALSRSITLVESTLKSDEEQAELLLDSVLAQRRSLKPTHVD----------------------------------------------------------------SAGLT-------SFRLGIAGPPGAGKSTFIETLGQLLTAQGHKVAVLAIDPSSSRSGGSILGDKTRMEKLSNDPN----AFVRPSPTRGTLGGVAQHTNDIVLLCEAGGYDIILVESVGLGQSEIVIDDTVDM 205          
BLAST of mRNA_H-canaliculatus_F_contig11931.1696.1 vs. uniprot
Match: A0A2D4BST0_PYTIN (LAO/AO transport system ATPase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BST0_PYTIN)

HSP 1 Score: 167 bits (422), Expect = 1.460e-44
Identity = 110/253 (43.48%), Postives = 138/253 (54.55%), Query Frame = 1
Query:  283 PYTADLVDGILAGNRTSLSRAITLVESHRLDHRRQAELLLDRVLSVRQEATLAPVPPPRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSAGAVLGDPLRLGMRLGIAGPPGAGKSSFIEVLGKSLTTAGNRVAVISIDPSSIRTGGSILGDKTRMHELSRDPRRVGEAFVRGCPARGVLGGISRYTHDVVLLCQVAGYDPVIVETVGLGQNEVPIFVCVDI 1041
            P T  LV+G++AGNRT+LSRAITL ES      +QAEL+LD VL  R++A         S                                                                 LG P     RLGIAGPPGAGKS+FIE LG+ LT  G++VAV++IDPSS R+GGSILGDKTRM  LS DP     AFVR  P+RG LGG++++T+D+VLLC+ AGYD V+VE+VGLGQ+E+ I   VD+
Sbjct:    3 PSTQRLVEGVIAGNRTALSRAITLAESSLKRDEQQAELMLDTVLKKRRDARHGHARQSSS-----------------------------------------------------------------LGLP---SFRLGIAGPPGAGKSTFIESLGQHLTERGHKVAVLAIDPSSSRSGGSILGDKTRMTNLSNDPN----AFVRPSPSRGTLGGVAQHTNDIVLLCEAAGYDIVLVESVGLGQSEIIIDDTVDM 183          
BLAST of mRNA_H-canaliculatus_F_contig11931.1696.1 vs. uniprot
Match: G4ZEZ6_PHYSP (AAA domain-containing protein n=21 Tax=Phytophthora TaxID=4783 RepID=G4ZEZ6_PHYSP)

HSP 1 Score: 166 bits (421), Expect = 1.770e-44
Identity = 108/253 (42.69%), Postives = 135/253 (53.36%), Query Frame = 1
Query:  283 PYTADLVDGILAGNRTSLSRAITLVESHRLDHRRQAELLLDRVLSVRQEATLAPVPPPRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSAGAVLGDPLRLGMRLGIAGPPGAGKSSFIEVLGKSLTTAGNRVAVISIDPSSIRTGGSILGDKTRMHELSRDPRRVGEAFVRGCPARGVLGGISRYTHDVVLLCQVAGYDPVIVETVGLGQNEVPIFVCVDI 1041
            P T  L DG+L GNRT+LSR+ITLVES       QAELLLD VL+ R+    A V                                                                  AG           RLGIAGPPGAGKS+FIE LG+ LT  G++VAV++IDPSS R+GGSILGDKTRM +LS DP     AFVR  P+RG LGG++++T+D+VLLC+  GYD ++VE+VGLGQ+E+ I   VD+
Sbjct:    3 PMTRRLADGVLQGNRTALSRSITLVESTLKSDEEQAELLLDSVLAQRRSLKPAHVD----------------------------------------------------------------QAGLT-------SFRLGIAGPPGAGKSTFIETLGQFLTAQGHKVAVLAIDPSSSRSGGSILGDKTRMEKLSNDPN----AFVRPSPSRGTLGGVAQHTNDIVLLCEAGGYDIILVESVGLGQSEIVIDDTVDM 180          
BLAST of mRNA_H-canaliculatus_F_contig11931.1696.1 vs. uniprot
Match: W7TPV1_9STRA (Methylmalonic aciduria type a mitochondrial n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPV1_9STRA)

HSP 1 Score: 167 bits (424), Expect = 4.310e-44
Identity = 110/257 (42.80%), Postives = 138/257 (53.70%), Query Frame = 1
Query:  283 PYTADLVDGILAGNRTSLSRAITLVESHRLDHRRQAELLLDRVL-----SVRQEATLAPVPPPRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSAGAVLGDPLRLG-------MRLGIAGPPGAGKSSFIEVLGKSLTTAGN-RVAVISIDPSSIRTGGSILGDKTRMHELSRDPRRVGEAFVRGCPARGVLGGISRYTHDVVLLCQVAGYDPVIVETVGLGQNE 1014
            P T  L +G+L GNR +LSRAITL+ES +  HR  AE LLD V+      VR++  L P                                                                  S  A + D  R+G       +R+GIAGPPGAGKS+FIE LGK LT +   RVAVI++DPSS R+GGSILGDKTRM+EL++DP+    AFVR CP  GVLGG++RYT+DVVLLCQ A +D V +E+VGLGQ+E
Sbjct:   46 PETRQLAEGVLRGNRLALSRAITLIESTKESHRLDAEALLDHVVYERSRRVREKGRLKP--------------------------------------------------------------GNSTSNAACVADEGRIGTSENVRPLRVGIAGPPGAGKSTFIEALGKYLTDSKKLRVAVIAVDPSSSRSGGSILGDKTRMYELAKDPK----AFVRACPTSGVLGGVARYTNDVVLLCQAASFDIVFIESVGLGQSE 236          
BLAST of mRNA_H-canaliculatus_F_contig11931.1696.1 vs. uniprot
Match: A0A8K1CFL8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CFL8_PYTOL)

HSP 1 Score: 165 bits (418), Expect = 6.950e-44
Identity = 110/258 (42.64%), Postives = 135/258 (52.33%), Query Frame = 1
Query:  283 PYTADLVDGILAGNRTSLSRAITLVESHRLDHRRQAELLLDRVLSVRQE-----ATLAPVPPPRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSAGAVLGDPLRLGMRLGIAGPPGAGKSSFIEVLGKSLTTAGNRVAVISIDPSSIRTGGSILGDKTRMHELSRDPRRVGEAFVRGCPARGVLGGISRYTHDVVLLCQVAGYDPVIVETVGLGQNEVPIFVCVDI 1041
            P T  LV+G+ AGNRT+LSRAITLVES       QAELLLD VL  R++       L  +P                                                                              RLGIAGPPGAGKS+FIE LG+ LT  G++VAV++IDPSS RTGGSILGDKTRM  LS DP     AFVR  P+RG LGG++++T+D+VLLC+ AGYD V+VE+VGLGQ+E+ I   VD+
Sbjct:   17 PITKKLVEGVTAGNRTALSRAITLVESTLKSDGEQAELLLDEVLKRRRDIRNRQTKLQALP----------------------------------------------------------------------------SFRLGIAGPPGAGKSTFIEALGQYLTKKGHKVAVLAIDPSSSRTGGSILGDKTRMTYLSNDPN----AFVRPSPSRGTLGGVAQHTNDIVLLCEAAGYDIVLVESVGLGQSEIVIDDTVDM 194          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11931.1696.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5D8_ECTSI1.560e-7979.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
W2NS63_PHYPR3.350e-4741.92LAO/AO transport system ATPase, variant 6 n=5 Tax=... [more]
W2HAL9_PHYPR3.760e-4741.92LAO/AO transport system ATPase, variant 4 n=5 Tax=... [more]
W2LL69_PHYPR1.770e-4641.92LAO/AO transport system ATPase, variant 3 n=6 Tax=... [more]
A0A5D6Y0Y2_9STRA3.590e-4643.08AAA domain-containing protein n=1 Tax=Pythium bras... [more]
H3GW23_PHYRM1.150e-4442.08AAA domain-containing protein n=8 Tax=Phytophthora... [more]
A0A2D4BST0_PYTIN1.460e-4443.48LAO/AO transport system ATPase n=1 Tax=Pythium ins... [more]
G4ZEZ6_PHYSP1.770e-4442.69AAA domain-containing protein n=21 Tax=Phytophthor... [more]
W7TPV1_9STRA4.310e-4442.80Methylmalonic aciduria type a mitochondrial n=2 Ta... [more]
A0A8K1CFL8_PYTOL6.950e-4442.64Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig11931contigH-canaliculatus_F_contig11931:42..3300 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score260.0
Seed ortholog evalue1.8e-66
Seed eggNOG ortholog2880.D7G5D8
Preferred nameMMAA
KEGG koko:K07588
GOsGO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009235,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0017144,GO:0019001,GO:0031974,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0033013,GO:0035639,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044281,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0046983,GO:0051186,GO:0070013,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363,GO:1901564
EggNOG free text desc.cobalamin biosynthetic process
EggNOG OGs2QR2W@2759,COG1703@1
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Hectar predicted targeting categorysignal peptide
Exons5
Model size1199
Cds size1197
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig11931.1696.1prot_H-canaliculatus_F_contig11931.1696.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig11931 44..3300 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928897.7750504-CDS-H-canaliculatus_F_contig11931:43..3621622928897.7750504-CDS-H-canaliculatus_F_contig11931:43..362Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11931 44..362 -
1696845605.3423493-CDS-H-canaliculatus_F_contig11931:43..3621696845605.3423493-CDS-H-canaliculatus_F_contig11931:43..362Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11931 44..362 -
1622928897.7841887-CDS-H-canaliculatus_F_contig11931:1069..12121622928897.7841887-CDS-H-canaliculatus_F_contig11931:1069..1212Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11931 1070..1212 -
1696845605.3564053-CDS-H-canaliculatus_F_contig11931:1069..12121696845605.3564053-CDS-H-canaliculatus_F_contig11931:1069..1212Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11931 1070..1212 -
1622928897.7928538-CDS-H-canaliculatus_F_contig11931:1743..21231622928897.7928538-CDS-H-canaliculatus_F_contig11931:1743..2123Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11931 1744..2123 -
1696845605.3656445-CDS-H-canaliculatus_F_contig11931:1743..21231696845605.3656445-CDS-H-canaliculatus_F_contig11931:1743..2123Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11931 1744..2123 -
1622928897.8061202-CDS-H-canaliculatus_F_contig11931:2685..29531622928897.8061202-CDS-H-canaliculatus_F_contig11931:2685..2953Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11931 2686..2953 -
1696845605.3756557-CDS-H-canaliculatus_F_contig11931:2685..29531696845605.3756557-CDS-H-canaliculatus_F_contig11931:2685..2953Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11931 2686..2953 -
1622928897.8157547-CDS-H-canaliculatus_F_contig11931:3213..33001622928897.8157547-CDS-H-canaliculatus_F_contig11931:3213..3300Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11931 3214..3300 -
1696845605.385833-CDS-H-canaliculatus_F_contig11931:3213..33001696845605.385833-CDS-H-canaliculatus_F_contig11931:3213..3300Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11931 3214..3300 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig11931.1696.1

>prot_H-canaliculatus_F_contig11931.1696.1 ID=prot_H-canaliculatus_F_contig11931.1696.1|Name=mRNA_H-canaliculatus_F_contig11931.1696.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=399bp
HARSTLNCLLCVVFLSRLATSTQLWSCIEGRHRPCPPSSVDRAASCSTTT
PVLPPPAPRLSALPSGTTAGASRPASASAAATPSASPASARRLWPYTADL
VDGILAGNRTSLSRAITLVESHRLDHRRQAELLLDRVLSVRQEATLAPVP
PPRSSPPEGNVVGSSNCGGSGNSSDGPRASIPPENREVAAATTGAAAEDR
ASWGRSASSRRRGGSAGAVLGDPLRLGMRLGIAGPPGAGKSSFIEVLGKS
LTTAGNRVAVISIDPSSIRTGGSILGDKTRMHELSRDPRRVGEAFVRGCP
ARGVLGGISRYTHDVVLLCQVAGYDPVIVETVGLGQNEVPIFVCVDIHVQ
ILWDDVCCCVGWGSRPRHLHAEERWVGMQGRGERKRAWQISELGVGMIE
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mRNA from alignment at H-canaliculatus_F_contig11931:42..3300-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig11931.1696.1 ID=mRNA_H-canaliculatus_F_contig11931.1696.1|Name=mRNA_H-canaliculatus_F_contig11931.1696.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3259bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11931:42..3300- (Hapterophycus canaliculatus Oshoro5f female)
CACGCGAGATCTACGTTGAACTGCTTGCTGTGTGTTGTGTTTCTCTCCCG ACTGGCTACGAGCACGCAGCTTTGGAGCTGTATCGAGGTGCAGCATCTAC TCGATTTCAATAGACAAGTGAATCGTTCAATGAACGATCCCGTTCTATCT CCCTTCTCTGATGGTGGTGATGTCTTTCAATAAACGAAAGCTGCGGTTGG ACCAAGATTTTGTCACACTGACATGTTTTAACGTTTGCCGGCACGTCGCA CGCGCTCGCTTACATGTATATCTACTCTCCGGCTTCTGCAGCTTTGCCTT CCCATTTCTCATCAACTCCTTCCCGTCGTTGCTTGCACGGTCAACAGGGT CGTCACCGGCCGTGCCCACCGTCCTCGGTTGATCGTGCGGCATCATGCAG CACCACCACTCCTGTCCTTCCTCCTCCTGCCCCTCGTCTTTCTGCACTCC CCTCTGGCACCACTGCTGGAGCGTCTAGGCCTGCTTCTGCTTCCGCTGCT GCTACCCCTTCGGCTTCTCCGGCTTCTGCGCGACGGCTGTGGCCCTACAC CGCGGACCTTGTCGACGGCATCCTCGCCGGAAACAGGACGTCGCTGAGCC GGGCGATCACATTAGGTGAGCCCTTTATTCCCGGGGACCAAGGGGGGGGG GCATGGCGGAGGAGGGAGGGCGGTTGGAGGGCGAGTTGCTGAGGTGCGCA TTTTTCTGCTTGGGGCATGGTGGCGTTCTAGGTATGCCTGATGGGGGCAG ACTGGTAATGTTAGCAAGGCAGGACTATCCCGTAATCACTGTTTGCACGA ATGCGATGGTGGCGGTGCTGGTGGTCGTGGTGGTCGTGGTGGTTGTAGTG AGGATGAGGATGGTAGTCTATGATAGGTTGTGCAGTCAGCAAGTGAGATC GGATGCACGTACGCATCGTCTCCTGCCTGGCACTCACCTCTATCAGTGGT TGGTGGCACCAACGTCCGCCCGGCTGTCTGCATGTCGTGCCCAACGCCGA CGTTGCTACCCAGCTACGTAACTTCCTTCTCCCTCCTCCTCTCCCTCCTC CTCCCTCTCCCTTTCTCTCTCGCTCCCGCACGCCCCACGGACTTCTGTTC TGCCATCCAACAACAACCGTCACGGGAACACCCCCACCACGAAATGCATG AACACTCGACGAACGGCCCACGGCCAGTGGAGTCGCATCGACTGGACCAC CGCAGGCAGGCGGAGCTCCTCCTCGACCGCGTGCTCTCAGTGCGACAGGA GGCAACACTGGCGCCTGTCCCTCCTCCGCGGTCCTCGCCACCAGAAGGCA ACGTGGTCGGCAGCAGCAACTGCGGCGGCAGCGGCAACAGCAGCGACGGC CCGAGGGCGAGCATTCCACCTGAAAATCGGGAGGTGGCGGCGGCGACGAC GGGGGCGGCCGCGGAGGACAGAGCATCGTGGGGCAGGAGCGCGTCCTCTC GAAGACGTGGTGGTAGCGCTGGCGCTGTTCTTGGCGACCCGCTTAGATTG GGGATGAGGCTCGGGATCGCCGGTCCTCCTGGGGCAGGAAAATCTTCCTT CATCGAGGTGATGAAGCAGCTCTTGGCGTTACTCGTGTCATGTTCTTGTT CTTGACGGCGATGGTGGTGGTGGTGGTGTTGGTGGTGTTGTTGTTGGTCG TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTCGTGCATGTGCTGGTG CCTTTGCTTTTGCAGCATTCACCGTTTGTTGCCGCTGCTTACCATGGCTG CGTTGGGTGTCATTGCTGCTGCTCTGCCACCACGGCCGCGGCTGCGGCCG CAGTCATCGCTGTCCCTACTGGGTCTCCTTGTCACGACGCACCTTTCGTT GAACCCTAACGCACGACGCATCCTGTCCATCACACCCACGAGTCTGACCC ATCCCCATCCCCTGCTGACCCGGGCTCGGCACCAACCCAGCCAATACAAC CACCAACATCGCCCCTCGTTTCCTGTCTGAGATTATTGTTGGCGCTCGCA ACCATCTTCTCGTGCGCACACACCTTCTACGCTCGGCGCTTGTACGCGCG TGTGTGGTACACCTCGGTGGACGGCTTGCGTTCACCAGGTGCTCGGCAAG AGCCTGACCACGGCCGGTAATCGGGTTGCGGTGATTTCCATCGACCCGTC TAGCATTCGCACCGGCGGCTCAATCCTAGGGGACAAGACGAGAATGCACG AGCTGTCTCGAGATCCTAGGCGAGTGGGCGAGTAGATGGACGGGATAGTC AGTACGGACGAAGCTCGTATAGGTGGGCGGAAAACGTGTGCAGGTCGATG GGATAGGTCGAGTACGTGGGCTGGGGTGTGTGTAGCAAGAGGCACGAGGT TTGCGACATGAAGACTGCCGGTCGCGCAAAGCCGTCCTACTCTGGTATTG TCATTGTCGAGGTAGGGTCCCTTGTACGATGAATAGTACTCCGGAGTATG GAAAACAAATCCGATTTCTTTTTTCAGCGGTTCGTACGCTTTATCCCAGA TCTCGACGTCCCCTCCTCTTCCGTAGGTGTGGCTTATCATGTTGGCCTCG AAGCTTCCATGCACGCAGGAGAGAATTTAGCGAAAGCGCCGGAATATTGG TGAGGATAAGGAATGCGGATGATCCCTTTAAAAACCCAGTATCTCCCACG GGCAGAGACAGCGCTTTGTCTCAGTCAAAACGCATGGCTGACCATCCACA GACTCGAGACACCACCAAAAAGACTCGGCTCCCTCCCTCCCCCTTCCCCA CGAGTGGTCCAGACCGTAGCGTTGCTTGCAACCACGATAGACCCGTCCCC CTCCCCTTGAGCGGTCTACTCCTCCGCAACTCCGCCCATCGAACGTCGAC CCCTCCTTCCCCTTAGCCCTTGCTGCGGCACATCTTAGTTGTTGCCAACC CCCGCCCCGCACCTCGTCTATGCCTTGACTTGCTCCAGGGCGTTCGTTCG TGGCTGCCCGGCGAGAGGGGTGCTGGGTGGCATATCGCGGTACACGCACG ATGTGGTGTTGCTGTGCCAGGTGGCCGGCTACGACCCCGTGATCGTCGAG ACCGTCGGCTTGGGACAGAACGAGGTGCCTATCTTTGTCTGCGTTGACAT ACACGTGCAAATTTTGTGGGATGACGTGTGTTGTTGCGTAGGTTGGGGTT CGCGACCACGGCATCTGCACGCCGAGGAGCGGTGGGTCGGCATGCAAGGA CGAGGTGAGCGAAAGAGAGCATGGCAGATCAGCGAGCTCGGCGTCGGTAT GATTGAGAA
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11931:42..3300-

>mRNA_H-canaliculatus_F_contig11931.1696.1 ID=mRNA_H-canaliculatus_F_contig11931.1696.1|Name=mRNA_H-canaliculatus_F_contig11931.1696.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2394bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11931:42..3300- (Hapterophycus canaliculatus Oshoro5f female)
CACGCGAGATCTACGTTGAACTGCTTGCTGTGTGTTGTGTTTCTCTCCCG
ACTGGCTACGAGCACGCAGCTTTGGAGCTGTATCGAGCACGCGAGATCTA
CGTTGAACTGCTTGCTGTGTGTTGTGTTTCTCTCCCGACTGGCTACGAGC
ACGCAGCTTTGGAGCTGTATCGAGGGTCGTCACCGGCCGTGCCCACCGTC
CTCGGTTGATCGTGCGGCATCATGCAGCACCACCACTCCTGTCCTTCCTC
CTCCTGCCCCTCGTCTTTCTGCACTCCCCTCTGGCACCACTGCTGGAGCG
TCTAGGCCTGCTTCTGCTTCCGCTGCTGCTACCCCTTCGGCTTCTCCGGC
TTCTGCGCGACGGCTGTGGCCCTACACCGCGGACCTTGTCGACGGCATCC
TCGCCGGAAACAGGACGTCGCTGAGCCGGGCGATCACATTAGGGTCGTCA
CCGGCCGTGCCCACCGTCCTCGGTTGATCGTGCGGCATCATGCAGCACCA
CCACTCCTGTCCTTCCTCCTCCTGCCCCTCGTCTTTCTGCACTCCCCTCT
GGCACCACTGCTGGAGCGTCTAGGCCTGCTTCTGCTTCCGCTGCTGCTAC
CCCTTCGGCTTCTCCGGCTTCTGCGCGACGGCTGTGGCCCTACACCGCGG
ACCTTGTCGACGGCATCCTCGCCGGAAACAGGACGTCGCTGAGCCGGGCG
ATCACATTAGTGGAGTCGCATCGACTGGACCACCGCAGGCAGGCGGAGCT
CCTCCTCGACCGCGTGCTCTCAGTGCGACAGGAGGCAACACTGGCGCCTG
TCCCTCCTCCGCGGTCCTCGCCACCAGAAGGCAACGTGGTCGGCAGCAGC
AACTGCGGCGGCAGCGGCAACAGCAGCGACGGCCCGAGGGCGAGCATTCC
ACCTGAAAATCGGGAGGTGGCGGCGGCGACGACGGGGGCGGCCGCGGAGG
ACAGAGCATCGTGGGGCAGGAGCGCGTCCTCTCGAAGACGTGGTGGTAGC
GCTGGCGCTGTTCTTGGCGACCCGCTTAGATTGGGGATGAGGCTCGGGAT
CGCCGGTCCTCCTGGGGCAGGAAAATCTTCCTTCATCGAGTGGAGTCGCA
TCGACTGGACCACCGCAGGCAGGCGGAGCTCCTCCTCGACCGCGTGCTCT
CAGTGCGACAGGAGGCAACACTGGCGCCTGTCCCTCCTCCGCGGTCCTCG
CCACCAGAAGGCAACGTGGTCGGCAGCAGCAACTGCGGCGGCAGCGGCAA
CAGCAGCGACGGCCCGAGGGCGAGCATTCCACCTGAAAATCGGGAGGTGG
CGGCGGCGACGACGGGGGCGGCCGCGGAGGACAGAGCATCGTGGGGCAGG
AGCGCGTCCTCTCGAAGACGTGGTGGTAGCGCTGGCGCTGTTCTTGGCGA
CCCGCTTAGATTGGGGATGAGGCTCGGGATCGCCGGTCCTCCTGGGGCAG
GAAAATCTTCCTTCATCGAGGTGCTCGGCAAGAGCCTGACCACGGCCGGT
AATCGGGTTGCGGTGATTTCCATCGACCCGTCTAGCATTCGCACCGGCGG
CTCAATCCTAGGGGACAAGACGAGAATGCACGAGCTGTCTCGAGATCCTA
GGCGAGTGGGCGAGTGCTCGGCAAGAGCCTGACCACGGCCGGTAATCGGG
TTGCGGTGATTTCCATCGACCCGTCTAGCATTCGCACCGGCGGCTCAATC
CTAGGGGACAAGACGAGAATGCACGAGCTGTCTCGAGATCCTAGGCGAGT
GGGCGAGGCGTTCGTTCGTGGCTGCCCGGCGAGAGGGGTGCTGGGTGGCA
TATCGCGGTACACGCACGATGTGGTGTTGCTGTGCCAGGTGGCCGGCTAC
GACCCCGTGATCGTCGAGACCGTCGGCTTGGGACAGAACGAGGTGCCTAT
CTTTGTCTGCGTTGACATACACGTGCAAATTTTGTGGGATGACGTGTGTT
GTTGCGTAGGTTGGGGTTCGCGACCACGGCATCTGCACGCCGAGGAGCGG
TGGGTCGGCATGCAAGGACGAGGTGAGCGAAAGAGAGCATGGCAGATCAG
CGAGCTCGGCGTCGGTATGATTGAGGGCGTTCGTTCGTGGCTGCCCGGCG
AGAGGGGTGCTGGGTGGCATATCGCGGTACACGCACGATGTGGTGTTGCT
GTGCCAGGTGGCCGGCTACGACCCCGTGATCGTCGAGACCGTCGGCTTGG
GACAGAACGAGGTGCCTATCTTTGTCTGCGTTGACATACACGTGCAAATT
TTGTGGGATGACGTGTGTTGTTGCGTAGGTTGGGGTTCGCGACCACGGCA
TCTGCACGCCGAGGAGCGGTGGGTCGGCATGCAAGGACGAGGTGAGCGAA
AGAGAGCATGGCAGATCAGCGAGCTCGGCGTCGGTATGATTGAG
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