mRNA_H-canaliculatus_F_contig11922.1684.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig11922.1684.1 vs. uniprot
Match: D7G3Q6_ECTSI (Glutamate dehydrogenase 2 (NADP-dependent) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3Q6_ECTSI) HSP 1 Score: 369 bits (948), Expect = 1.140e-123 Identity = 180/222 (81.08%), Postives = 201/222 (90.54%), Query Frame = 1
Query: 1 QYKRMSLDAPPIGGGLLWGGAVPHPECAGHGVVYFAEKALRGRGESLMGKRCVITGSGKKVALYAAEKLLELGAIPVTFSDSSGHVYEPEGFDIDQFKTIVKIKEERGARVGRYIVASTTAKYNEPPSVFEAPADVVFLCSTPNELTKEGAAALVASGCKTVVDGGYRPVSKPASEILKKNGVFHVPYRGTMIGAALGGGRELARNPLGPGETMDSRLEKKV 666
QYKRMSLDA PIG GLLWGGAVPHPECAG+GVVYFAEKA+RGRGESLMGKRC++TGSGK VAL+ AEKLLELGA P+TF+DSSGHV+EPEGFD+++FK I KIK+ERGARVGRYIVAS +AKYNEP SVF+APADV FLC T NELT+ A ALVASGCKTVVDGGYRPVS A+E+LKKNG+FHVPYRGTMIGAA+ GGREL RNPL PGET+D RLEKK+
Sbjct: 272 QYKRMSLDASPIGRGLLWGGAVPHPECAGYGVVYFAEKAMRGRGESLMGKRCIVTGSGK-VALHVAEKLLELGATPMTFTDSSGHVFEPEGFDVEKFKKIAKIKQERGARVGRYIVASPSAKYNEPQSVFDAPADVAFLCRTSNELTEVEANALVASGCKTVVDGGYRPVSTAAAEVLKKNGIFHVPYRGTMIGAAISGGRELDRNPLQPGETIDDRLEKKM 492
BLAST of mRNA_H-canaliculatus_F_contig11922.1684.1 vs. uniprot
Match: D8LK56_ECTSI (Glutamate dehydrogenase 1 (NADP-dependent) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK56_ECTSI) HSP 1 Score: 239 bits (609), Expect = 8.260e-73 Identity = 116/222 (52.25%), Postives = 156/222 (70.27%), Query Frame = 1
Query: 1 QYKRMSLDAPPIGGGLLWGGAVPHPECAGHGVVYFAEKALRGRGESLMGKRCVITGSGKKVALYAAEKLLELGAIPVTFSDSSGHVYEPEGFDIDQFKTIVKIKEERGARVGRYIVASTTAKYNEPPSVFEAPADVVFLCSTPNELTKEGAAALVASGCKTVVDGGYRPVSKPASEILKKNGVFHVPYRGTMIGAALGGGRELARNPLGPGETMDSRLEKKV 666
QYKR++ G G+LWGGA+P+PE G+GVV FA L +G+SL GKRC+ITGSGK VA++ AEKLL+LGAIP+TFSDSSGH+YEPEG D + +TIVKIK ERGARVGRYI+ASTTA+Y EP ++F+ P D+ F CS NE+ + A L +GC V++G P +K A + +K G+ P+ T+ G+ + G LA NP+G E + R+E+K+
Sbjct: 265 QYKRINDHVAQRGRGVLWGGAMPYPEATGYGVVEFARCMLEDKGDSLKGKRCLITGSGK-VAVHVAEKLLQLGAIPLTFSDSSGHIYEPEGIDSAKLRTIVKIKSERGARVGRYIIASTTAQYTEPANIFDIPCDLAFACSHRNEVDETAATLLADTGCSAVIEGASAPCTKAAKAVFRKRGLLFAPHVATLAGSGIVSGLALATNPVGAKENIHDRVEEKM 485
BLAST of mRNA_H-canaliculatus_F_contig11922.1684.1 vs. uniprot
Match: A0A836CHL3_9STRA (Glutamate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHL3_9STRA) HSP 1 Score: 227 bits (579), Expect = 8.700e-69 Identity = 110/222 (49.55%), Postives = 156/222 (70.27%), Query Frame = 1
Query: 1 QYKRMSLDAPPIGGGLLWGGAVPHPECAGHGVVYFAEKALRGRGESLMGKRCVITGSGKKVALYAAEKLLELGAIPVTFSDSSGHVYEPEGFDIDQFKTIVKIKEERGARVGRYIVASTTAKYNEPPSVFEAPADVVFLCSTPNELTKEGAAALVASGCKTVVDGGYRPVSKPASEILKKNGVFHVPYRGTMIGAALGGGRELARNPLGPGETMDSRLEKKV 666
QYKR++ G G+LWGG +PE GHGVVYFA + LR +G+SL GKRC++TGSGK +AL A KLLELGAIP++FSDS+GH+ E +GFD + +T+V IK ERGAR+GRYI++STTA++N+P +F+ PADVVF + NE+ + A L +GC V++G P +K A + +K GV P+ T+ G + G EL+ NPL PG+++D R+E+++
Sbjct: 222 QYKRVNDHVAQKGRGVLWGGIPLYPEGVGHGVVYFANEMLRDKGDSLKGKRCLVTGSGK-LALSIAGKLLELGAIPISFSDSNGHIVETDGFDAAKLRTVVSIKNERGARLGRYIISSTTARFNDPECIFDVPADVVFAAAHRNEIDADRAQRLAENGCLAVIEGANSPCTKAAKAVFRKRGVLFGPHMATLAGNGIVSGFELSSNPLLPGQSIDRRVEEQM 442
BLAST of mRNA_H-canaliculatus_F_contig11922.1684.1 vs. uniprot
Match: A0A6V1RCQ3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RCQ3_HETAK) HSP 1 Score: 224 bits (571), Expect = 3.150e-67 Identity = 113/218 (51.83%), Postives = 141/218 (64.68%), Query Frame = 1
Query: 1 QYKRMSLDAPPIGGGLLWGGAVPHPECAGHGVVYFAEKALRGRGESLMGKRCVITGSGKKVALYAAEKLLELGAIPVTFSDSSGHVYEPEGFDIDQFKTIVKIKEERGARVGRYIVASTTAKYNEPPSVFEAPADVVFLCSTPNELTKEGAAALVASGCKTVVDGGYRPVSKPASEILKKNGVFHVPYRGTMIGAALGGGRELARNPLGPGETMDSRL 654
QYKR +G GLLWGGA P P C G GV +FA++ L +GESL GKRC+ITGSGK A A KLLE GA+P+TFSDSSGH+YEP+G D +FK + KIK ERGAR+GRYI+ASTTA+YNEP +F P D+VFLC NE+ A + G VV+G P S A ++ KK G+ PYR T+ GA+L G LA N + MD ++
Sbjct: 258 QYKRTHNHISHLGRGLLWGGAPPFPHCTGFGVAHFAQQMLEDKGESLKGKRCLITGSGKN-AQAVARKLLEFGAVPLTFSDSSGHIYEPDGLDAVKFKQVAKIKAERGARIGRYIIASTTARYNEPEDLFGIPCDLVFLCGPMNEVGAAAAQQIADGGALGVVEGCNMPCSPEAIKVFKKRGLLFAPYRATLAGASLVNGTALAHNRIASEADMDEQV 474
BLAST of mRNA_H-canaliculatus_F_contig11922.1684.1 vs. uniprot
Match: A0A4D9CY97_9STRA (Glutamate dehydrogenase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CY97_9STRA) HSP 1 Score: 219 bits (558), Expect = 2.340e-65 Identity = 111/222 (50.00%), Postives = 152/222 (68.47%), Query Frame = 1
Query: 1 QYKRMSLDAPPIGGGLLWGGAVPHPECAGHGVVYFAEKALRGRGESLMGKRCVITGSGKKVALYAAEKLLELGAIPVTFSDSSGHVYEPEGFDIDQFKTIVKIKEERGARVGRYIVASTTAKYNEPPSVFEAPADVVFLCSTPNELTKEGAAALVASGCKTVVDGGYRPVSKPASEILKKNGVFHVPYRGTMIGAALGGGRELARNPLGPGETMDSRLEKKV 666
QYKRMS+ G GLLWGG P P+ GVV++A + L G+G+SL GKRC+ITGSGK +AL+ AEKL+E+GA+P+T SD+SGHVYEP+G D + KTI+KIK ERGAR+GRYI+ASTTAKYNEP +VF PAD+VF C+T NE+ A L G + V +G + P + A I KK G+ H + T+ ++ G EL+++ + +D R+++ V
Sbjct: 253 QYKRMSIHHAQKGKGLLWGGVYPFPQATASGVVHWAARVLEGKGDSLEGKRCLITGSGK-MALHVAEKLVEMGAVPLTLSDTSGHVYEPDGIDAAKLKTIMKIKSERGARIGRYIIASTTAKYNEPENVFSVPADLVFPCATHNEIDGVTATMLADMGVQGVFEGSHMPCTNQAISIFKKRGILHGGHVATLAADSIFNGLELSKSSPSMHD-LDGRIKEAV 472
BLAST of mRNA_H-canaliculatus_F_contig11922.1684.1 vs. uniprot
Match: A0A7S2RRL7_9STRA (Glutamate dehydrogenase n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RRL7_9STRA) HSP 1 Score: 207 bits (526), Expect = 3.760e-61 Identity = 105/218 (48.17%), Postives = 137/218 (62.84%), Query Frame = 1
Query: 1 QYKRMSLDAPPIGGGLLWGGAVPHPECAGHGVVYFAEKALRGRGESLMGKRCVITGSGKKVALYAAEKLLELGAIPVTFSDSSGHVYEPEGFDIDQFKTIVKIKEERGARVGRYIVASTTAKYNEPPSVFEAPADVVFLCSTPNELTKEGAAALVASGCKTVVDGGYRPVSKPASEILKKNGVFHVPYRGTMIGAALGGGRELARNPLGPGETMDSRL 654
QYKR+ G G LWGG VP GHGV +FAE+ LR + E+L GKR +ITGSG +AL AE+LL+ GAIPVTFSDSSGH+YE +G D + TI IK ERGAR+GRYIVASTTAKY++P +F P D+ C E+T A L+A+GCK +V+GG P + A L++NG+ PY+ T+ A+ G L + + E +D L
Sbjct: 197 QYKRIKDIGAKQGSGFLWGGRVPWRFAYGHGVAHFAERMLRDKKETLQGKRVLITGSGN-IALGVAERLLQFGAIPVTFSDSSGHIYEQDGIDASKLATIKHIKSERGARLGRYIVASTTAKYSDPEDIFSIPCDICIPCGPSQEVTDSVAQTLIANGCKAIVEGGSSPCTPDAIVTLRRNGILFAPYKATLSAGAVTSGGALQSSSITTAEDLDRAL 413
BLAST of mRNA_H-canaliculatus_F_contig11922.1684.1 vs. uniprot
Match: A0A7S3ZJ22_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZJ22_9STRA) HSP 1 Score: 199 bits (506), Expect = 9.640e-58 Identity = 105/198 (53.03%), Postives = 134/198 (67.68%), Query Frame = 1
Query: 1 QYKRMSLDAPPIGGGLLWGGAVPHPECAGHGVVYFAEKALRGRGESLMGKRCVITGSGKKVALYAAEKLLELGAIPVTFSDSSGHVYEPEGFDIDQFKTIVKIKEERGARVGRYIVASTTAKYNEPPSVFEAPADVVFLCSTPNELTKEGAAALVASGCKTVVDGGYRPVSKPASEILKKNGVFHVPYRGTM-IGAAL 591
QYKR + + G G+LWGG+VPHPE G+G V FA+ L RG+SL GKRC++TGSGK VAL A+KL+ GAIP+T SD+SG +YE G + I IK ERGAR+GRYIVASTTAKYN+P +F+ P D+VF ++ NE+ + A L +GC T+VD GY P + A LKK GV H P+R T+ IG AL
Sbjct: 246 QYKRTATNLSKHGFGMLWGGSVPHPEVHGYGPVSFAKSFLEARGDSLRGKRCLVTGSGK-VALAVADKLVAEGAIPLTLSDTSGFIYEEGGLPSAKLAQISTIKAERGARIGRYIVASTTAKYNDPEDIFDVPCDLVFPTNS-NEIDAQAAEKLANNGCSTIVDAGYSPTTPEAIASLKKLGVAHCPFRATLAIGNAL 441
BLAST of mRNA_H-canaliculatus_F_contig11922.1684.1 vs. uniprot
Match: F0Y860_AURAN (Uncharacterized protein GDH n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y860_AURAN) HSP 1 Score: 197 bits (502), Expect = 1.480e-57 Identity = 100/192 (52.08%), Postives = 132/192 (68.75%), Query Frame = 1
Query: 1 QYKRMSLDAPPIGGGLLWGGAVPHPECAGHGVVYFAEKALRGRGESLMGKRCVITGSGKKVALYAAEKLLELGAIPVTFSDSSGHVYEPEGFDIDQFKTIVKIKEERGARVGRYIVASTTAKYNEPPSVFEAPADVVFLCSTPNELTKEGAAALVASGCKTVVDGGYRPVSKPASEILKKNGVFHVPYRGTM 576
QYKR + G G+LWGGA+PHPE G+ V+FA+ + RGESL GKRC+ITGSGK VAL AE+LL LGA+P+TFSD+SGH+YEP+G +F+ I IK ERGARVGRYI+ASTTAK+NEP ++ P D+VF + E+ + AA L +GC VVD GY P + A KK G+ + P++ ++
Sbjct: 203 QYKRTTEHYARHGRGILWGGALPHPEVFGYSAVHFAKHLVESRGESLAGKRCLITGSGK-VALAVAERLLALGAVPLTFSDTSGHIYEPDGIAATKFEQISTIKAERGARVGRYIIASTTAKFNEPEDIYSIPCDIVFP-TIRGEIDADVAARLADNGCAAVVDAGYAPSTPSAIRAYKKLGMAYGPFKASL 392
BLAST of mRNA_H-canaliculatus_F_contig11922.1684.1 vs. uniprot
Match: A0A7S3PXE2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PXE2_9STRA) HSP 1 Score: 191 bits (485), Expect = 1.560e-54 Identity = 98/197 (49.75%), Postives = 135/197 (68.53%), Query Frame = 1
Query: 1 QYKRMSLDAPPIGGGLLWGGAVPHPECAGHGVVYFAEKALRGRGESLMGKRCVITGSGKKVALYAAEKLLELGAIPVTFSDSSGHVYEPEGFDIDQFKTIVKIKEERGARVGRYIVASTTAKYNEPPSVFEAPADVVFLCSTPNELTKEGAAALVASGCKTVVDGGYRPVSKPASEILKKNGVFHVPYRGTMIGAAL 591
Q+KR+S+ + G L A PE G GVV+FA + ++ +G+SL GKRC+I G+GK VA A KLLE GAIP+TFSDSSGHVYEP G D + KTI KIK+ERGA +GRY++ASTTA++N+P ++ + P D+ F C+ N++T+E A L +GC VV+GGY V+ ILKK G+ + P+ TM G+A+
Sbjct: 267 QHKRISIKSSSGGRPFL---AASCPEAPGVGVVHFANEMMKDKGDSLQGKRCLIIGAGK-VARSVAAKLLEFGAIPLTFSDSSGHVYEPNGIDQAKLKTIDKIKDERGALLGRYVIASTTAQFNDPQNILDVPCDLCFPCAAMNDITEEAATKLADNGCMAVVEGGYSTVTPEGRTILKKRGLAYGPHTLTMTGSAI 459
BLAST of mRNA_H-canaliculatus_F_contig11922.1684.1 vs. uniprot
Match: A0A835YWP2_9STRA (Glutamate dehydrogenase 1 (NADP-dependent) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWP2_9STRA) HSP 1 Score: 190 bits (483), Expect = 1.610e-54 Identity = 96/198 (48.48%), Postives = 134/198 (67.68%), Query Frame = 1
Query: 1 QYKRMSLDAPPIGGGLLWGGAVPHPECAGHGVVYFAEKALRGRGESLMGKRCVITGSGKKVALYAAEKLLELGAIPVTFSDSSGHVYEPEGFDIDQFKTIVKIKEERGARVGRYIVASTTAKYNEPPSVFEAPADVVFLCSTPNELTKEGAAALVASGCKTVVDGGYRPVSKPASEILKKNGVFHVPYRGTMIGAALG 594
QYKR++ G G+LWGG +PE GHGVVYFA + LR +G+SL GKRC++TGSGK +AL A KLLELGAIP++FSDS+GH+ E +GFD + +T+V IK ERGAR+GRYI++STTA++N+P +F+ PAD VF + NE+ + A L +GC V++G P +K +L++ + H G + A G
Sbjct: 241 QYKRVNDHVAQKGRGVLWGGIPLYPEGVGHGVVYFANEMLRDKGDSLKGKRCLVTGSGK-LALSIAGKLLELGAIPISFSDSNGHIVETDGFDAAKLRTVVSIKNERGARLGRYIISSTTARFNDPECIFDVPADGVFAAAHRNEIDADRAQRLAENGCLAVIEGANSPCTKA---VLRRTRLLHGVREGKLALAQSG 434 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11922.1684.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig11922.1684.1 >prot_H-canaliculatus_F_contig11922.1684.1 ID=prot_H-canaliculatus_F_contig11922.1684.1|Name=mRNA_H-canaliculatus_F_contig11922.1684.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=218bp MSLDAPPIGGGLLWGGAVPHPECAGHGVVYFAEKALRGRGESLMGKRCVIback to top mRNA from alignment at H-canaliculatus_F_contig11922:309..3175+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig11922.1684.1 ID=mRNA_H-canaliculatus_F_contig11922.1684.1|Name=mRNA_H-canaliculatus_F_contig11922.1684.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2867bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11922:309..3175+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11922:309..3175+ >mRNA_H-canaliculatus_F_contig11922.1684.1 ID=mRNA_H-canaliculatus_F_contig11922.1684.1|Name=mRNA_H-canaliculatus_F_contig11922.1684.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1308bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11922:309..3175+ (Hapterophycus canaliculatus Oshoro5f female)back to top |