mRNA_H-canaliculatus_F_contig1190.1672.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1190.1672.1
Unique NamemRNA_H-canaliculatus_F_contig1190.1672.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1190.1672.1 vs. uniprot
Match: D7FZG5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZG5_ECTSI)

HSP 1 Score: 295 bits (755), Expect = 1.440e-94
Identity = 173/256 (67.58%), Postives = 198/256 (77.34%), Query Frame = 3 
Query:  516 EGTRAEVEKEDE--GDGLLASLADELVWRGGDEEXXXXXXXXXXEYEEYDSYEFDEGKGLEGLDLESLGISMMDEASADDVQEELQRKWGTVSVENSQDEYEVDTAELQSKLRQAMEVLGCQAWDVGAVLTTDEEVARLNRQYRGIKSSTDILSFPNNDMSDNPGMLPKVRFPAEMDLGDMFISLAYVDRQIKRDKKXXXXXXXXXXXGHGEEGDHEWWDSERGVSGAMSRVFNVQERGAKLLVRGLLHLLGFHHE 1277
            EG   E E EDE  GDGLLA+LADELVW G  +E          E             G+EGLDLESLGIS+MD+  A++VQE+L+R+WGT SV+N Q EYE+DTAELQSK+RQ MEVLGCQAWDVGAVLTTD+EV RLNRQYRG+ +STDILSFPN+DMS +PG+LPKVRFPAEMDLGDMFISLAYVDRQIKRD++ XXXXXXXXXX           DSERGVSGAMSRVF+VQER + LLV GL+HLLG+ HE
Sbjct:   24 EGAHGESEVEDEEGGDGLLAALADELVWEGDGDEG---------EXXXXXXXXXXXXAGMEGLDLESLGISIMDDEDAEEVQEQLRREWGTASVQNEQKEYEIDTAELQSKMRQTMEVLGCQAWDVGAVLTTDKEVFRLNRQYRGMSTSTDILSFPNHDMSGSPGVLPKVRFPAEMDLGDMFISLAYVDRQIKRDREEXXXXXXXXXXXXXXXXXX-XXDSERGVSGAMSRVFDVQERASMLLVHGLIHLLGYDHE 269
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BLAST of mRNA_H-canaliculatus_F_contig1190.1672.1 vs. uniprot
Match: A0A835Z8A0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8A0_9STRA)

HSP 1 Score: 149 bits (375), Expect = 9.380e-39
Identity = 94/214 (43.93%), Postives = 121/214 (56.54%), Query Frame = 3 
Query:  687 LEGLDLESLGISMMDEASADDVQEELQRKWGTVSVENSQDEYEVDTAELQSKLRQAMEVLGCQAWDVGAVLTTDEEVARLNRQYRGIKSSTDILSFPNNDMS-----------------DNPGMLPKVRFPAEMDLGDMFISLAYVDRQIKRDKKXXXXXXXXXXXGHGEEGDHEWWDSERGVSGAMSRVFNVQERGAKLLVRGLLHLLGFHHE 1277
            L G  +E L I   +E +A     E   + GTV V N+Q  Y++DT +L+  +R A ++LG   WDV   LTTD+ V +LN QYRG   STDILSF  N++                  + PG L KVR P EMDLG+M +SLAYVDR I++DK            G  +E +H     +RGVSGAMSRVF VQER   L + GLLHL+G+ HE
Sbjct:   10 LGGGSIEVLEIPSDEELAA-----ECASRTGTVYVRNTQRSYKIDTQQLEQHIRAARDLLGYSNWDVSLWLTTDKTVRKLNSQYRGKDKSTDILSFSYNELQCSYRLLHGGSHSTKLQVETPGKLAKVRHPEEMDLGEMMVSLAYVDRVIQQDKAEQD--------GQSQEEEH-----DRGVSGAMSRVFTVQERLPLLCIHGLLHLVGYDHE 205
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BLAST of mRNA_H-canaliculatus_F_contig1190.1672.1 vs. uniprot
Match: A0A4D9DAX9_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAX9_9STRA)

HSP 1 Score: 108 bits (269), Expect = 7.010e-23
Identity = 66/170 (38.82%), Postives = 97/170 (57.06%), Query Frame = 3 
Query:  777 GTVSVENSQDEYEVDTAELQSKLRQAMEVLGCQAWDVGAVLTTDEEVARLNRQYRGIKSSTDILSFPNNDMSDNPGMLPKVRFPAE---MDLGDMFISLAYVDRQIKRDKKXXXXXXXXXXXGHGEEGDHEWWDSERGVSGAMSRVFNVQERGAKLLVRGLLHLLGFHHE 1277
            GT+ + NSQ    +D   L +++R  +E++G    DV   LT D  +   N +YRG +++TDILSFP ++  + PG+     +       DLGDM +S+ YV RQ +RD+               E+G++  W  ERG SGAM+RVF VQ+R   L++ G+LHLLGF HE
Sbjct:   75 GTIQIRNSQRTIALDLDLLNTQVRAILEIVGKSDHDVSLWLTNDRSIREYNDRYRGKRTATDILSFPFHEY-EAPGVPTSESWALTGEVKDLGDMIVSVPYVQRQCQRDQVDWF-----------EKGEN-LWSGERGASGAMARVFGVQDRLPFLVIHGVLHLLGFDHE 231
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BLAST of mRNA_H-canaliculatus_F_contig1190.1672.1 vs. uniprot
Match: W7UC15_9STRA (Rrna maturation factor n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UC15_9STRA)

HSP 1 Score: 108 bits (270), Expect = 2.750e-22
Identity = 66/170 (38.82%), Postives = 97/170 (57.06%), Query Frame = 3 
Query:  777 GTVSVENSQDEYEVDTAELQSKLRQAMEVLGCQAWDVGAVLTTDEEVARLNRQYRGIKSSTDILSFPNNDMSDNPGMLPKVRFPAE---MDLGDMFISLAYVDRQIKRDKKXXXXXXXXXXXGHGEEGDHEWWDSERGVSGAMSRVFNVQERGAKLLVRGLLHLLGFHHE 1277
            GT+ + NSQ    +D   L +++R  +E++G    DV   LT D  +   N +YRG +++TDILSFP ++  + PG+     +       DLGDM +S+ YV RQ +RD+               E+G++  W  ERG SGAM+RVF VQ+R   L++ G+LHLLGF HE
Sbjct:  211 GTIQIRNSQRTIALDLDLLHAQVRTILEIVGKSDHDVSLWLTNDRSIREYNDRYRGKRTATDILSFPFHEY-EAPGIPTSESWALTGEVKDLGDMIVSVPYVQRQCQRDQADWL-----------EKGEN-LWSGERGASGAMARVFGVQDRLPFLVIHGVLHLLGFDHE 367
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BLAST of mRNA_H-canaliculatus_F_contig1190.1672.1 vs. uniprot
Match: A0A7S2RF28_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RF28_9STRA)

HSP 1 Score: 101 bits (251), Expect = 9.670e-21
Identity = 66/171 (38.60%), Postives = 91/171 (53.22%), Query Frame = 3 
Query:  777 GTVSVENSQDEYEVDTAELQSKLRQAMEVLGCQAWDVGAVLTTDEEVARLNRQYRGIKSSTDILSFPNNDMSDNPGMLPKVRFPAEMDLGDMFISLAYVDRQIKRDKKXXXXXXXXXXXGHGEEGDHEWWDSER----GVSGAMSRVFNVQERGAKLLVRGLLHLLGFHHE 1277
            GTV + ++Q    VDT  L+ ++R  + VL     DVG  L++D  V   N +YRG++ STDILSFP  D    P  LP+++   +M+LGDM +S+ YV R  KRD +             GE+     W  E     GVSG M   F+ Q R A L++ G+ HLLG  HE
Sbjct:   63 GTVLIRHTQRTVPVDTELLEEQVRAILAVLELPHMDVGLWLSSDRTVRDWNTRYRGMRKSTDILSFPFYDQLRAPDPLPEMQCEDDMNLGDMIVSVPYVARACKRDHRDALSM--------GEDS----WTGESVQLGGVSGEMMHYFSPQPRLALLVIHGICHLLGHDHE 221
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BLAST of mRNA_H-canaliculatus_F_contig1190.1672.1 vs. uniprot
Match: A0A7S1ZIF3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZIF3_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 2.820e-19
Identity = 62/157 (39.49%), Postives = 96/157 (61.15%), Query Frame = 3 
Query:  816 VDTAELQSKLRQAMEVLGCQAWDVGAVLTTDEEVARLNRQYRGIKSSTDILSFP-NNDMSDNPGMLPKVRFPAE--MDLGDMFISLAYVDRQIKRDKKXXXXXXXXXXXGHGEEGDHEWWDSERGVSGAMSRVFNVQERGAKLLVRGLLHLLGFHHE 1277
            +D + LQ K+    +++G + +DV  +LT DE +  +N   RG+   TDILSFP +N++   PG+L    F  E   +LG+M + + Y++R+I+ D++   XXXXXXXX              RGVSGAM++V++V+ER   L V G+LHL+G+ HE
Sbjct:  124 IDISTLQHKVSIIRQIIGYETYDVSILLTDDELITEINNDTRGMNKPTDILSFPFDNEVIVEPGVLGDAEFDHEDFYNLGEMIVDVPYIERRIEEDREYYEXXXXXXXX-----------XXXRGVSGAMAKVYDVEERIGMLFVHGMLHLVGYDHE 269
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BLAST of mRNA_H-canaliculatus_F_contig1190.1672.1 vs. uniprot
Match: F0XVF3_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVF3_AURAN)

HSP 1 Score: 95.1 bits (235), Expect = 5.230e-19
Identity = 64/170 (37.65%), Postives = 91/170 (53.53%), Query Frame = 3 
Query:  777 GTVSVENSQDEYEVDTAELQSKLRQAMEVLGCQAWDVGAVLTTDEEVARLNRQYRGIKSSTDILSFPNNDMSDNPGMLPKV---RFPAEMDLGDMFISLAYVDRQIKRDKKXXXXXXXXXXXGHGEEGDHEWWDSERGVSGAMSRVFNVQERGAKLLVRGLLHLLGFHHE 1277
            GTV + N+Q    +D   ++S  R  +E L C  +DVG  LTTD  + + N ++RG++ STDILSFP +D    PG LP         +++LGDM +S+ YV R+ ++D                   DH      RGV+ AM+ V +V+ER   LLV GL HLL + HE
Sbjct:   37 GTVLIRNTQRSIPIDVDAVESVTRALLERLRCSEFDVGIWLTTDATIRKYNTRFRGMRKSTDILSFPFHDELA-PGALPDAVDRDDEDDLNLGDMVVSVPYVRRRAEKDGGR----------------DHA---PGRGVAAAMAPVADVEERIHMLLVHGLCHLLNYDHE 186
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BLAST of mRNA_H-canaliculatus_F_contig1190.1672.1 vs. uniprot
Match: A0A1Z5K9I9_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K9I9_FISSO)

HSP 1 Score: 90.5 bits (223), Expect = 3.700e-17
Identity = 56/160 (35.00%), Postives = 86/160 (53.75%), Query Frame = 3 
Query:  804 DEYEVDTAELQSKLRQAMEVLGCQAWDVGAVLTTDEEVARLNRQYRGIKSSTDILSFPNNDMSDNPGML--PKVRFPAEMDLGDMFISLAYVDRQIKRDKKXXXXXXXXXXXGHGEEGDHEWWDSERGVSGAMSRVFNVQERGAKLLVRGLLHLLGFHHE 1277
            D  ++D A L   L +    +G + + V   L  DEE+  +N + RG+ + +DILSFP +D  + PG L  P+   P    LGD+ + + YV R+ + DK+              +E        ERGVSGAM+R+++ +ER   LLV G+LHL+G+ HE
Sbjct:   59 DVLQIDEARLLETLSRIRRHIGYETYGVSLELIGDEEMQAVNLESRGVDAPSDILSFPFSDYIE-PGTLEPPQFDIPDYYQLGDLLVDVPYVMRRCQEDKEYYEQL---------DESXXXXXXXERGVSGAMARIYDAEERIHMLLVHGMLHLVGYDHE 208
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BLAST of mRNA_H-canaliculatus_F_contig1190.1672.1 vs. uniprot
Match: A0A1Z5JES7_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JES7_FISSO)

HSP 1 Score: 90.5 bits (223), Expect = 3.850e-17
Identity = 62/170 (36.47%), Postives = 93/170 (54.71%), Query Frame = 3 
Query:  777 GTVSVENSQDEY-EVDTAELQSKLRQAMEVLGCQAWDVGAVLTTDEEVARLNRQYRGIKSSTDILSFPNNDMSDNPGML--PKVRFPAEMDLGDMFISLAYVDRQIKRDKKXXXXXXXXXXXGHGEEGDHEWWDSERGVSGAMSRVFNVQERGAKLLVRGLLHLLGFHHE 1277
            G +  +N Q    E+D A L   L +    +G + + V   L  DEE+  +N + RG+ + TDILSFP ++  + PG L  P+   P    LGD+ + + YV R+ + DK+      XXXXX             ERGVSGAM+R+++ +ER   LL+ G+LHL+G+ HE
Sbjct:   51 GKILFQNDQTNVLEIDEARLLETLNRIRRHIGYETYGVSLELIGDEEMQEINLESRGVDAPTDILSFPFSEYIE-PGTLEPPQFDIPDYYQLGDLLVDVPYVMRRCQEDKEYYEQLDXXXXX---------XXXXERGVSGAMARIYDAEERIHMLLIHGMLHLVGYDHE 210
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BLAST of mRNA_H-canaliculatus_F_contig1190.1672.1 vs. uniprot
Match: A0A7S4LBJ0_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LBJ0_9EUGL)

HSP 1 Score: 92.0 bits (227), Expect = 6.910e-17
Identity = 64/187 (34.22%), Postives = 93/187 (49.73%), Query Frame = 3 
Query:  720 SMMDEASADDVQEELQRKWGTVSVENSQDEYEVDTAELQSKLRQAMEVLGCQAWDVGAVLTTDEEVARLNRQYRGIKSSTDILSFPNNDMSDNPGMLPKVRFPAEMDLGDMFISLAYVDRQIKRDKKXXXXXXXXXXXGHGEEGDHEWWDSERGVSGAMSR-VFNVQERGAKLLVRGLLHLLGFHHE 1277
            ++MDE    D +E        V V N Q E E+D   LQ +L     +L    + V  +L  D+E+ RLNR++RG+ S TDILSF   D+ + P  +P  +     +LGD+ +S+ YV RQ + D +                      D  +GV+G M+   F VQER   L++ G+LHLLG  HE
Sbjct:  160 TLMDEGEGSDAEE------AEVMVINQQSEIELDETTLQQQLEIIRAILSVDHYAVTLMLGGDDEIQRLNREFRGVDSPTDILSFSAVDVVE-PEKVPLCKHRELCNLGDLVVSVPYVKRQCEADAQDYDGSTAA--------------DLSQGVAGLMATGFFTVQERMPLLMIHGMLHLLGHDHE 325
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1190.1672.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZG5_ECTSI1.440e-9467.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z8A0_9STRA9.380e-3943.93Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9DAX9_9STRA7.010e-2338.82Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7UC15_9STRA2.750e-2238.82Rrna maturation factor n=1 Tax=Nannochloropsis gad... [more]
A0A7S2RF28_9STRA9.670e-2138.60Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1ZIF3_9STRA2.820e-1939.49Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
F0XVF3_AURAN5.230e-1937.65Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A1Z5K9I9_FISSO3.700e-1735.00Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A1Z5JES7_FISSO3.850e-1736.47Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A7S4LBJ0_9EUGL6.910e-1734.22Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1190contigH-canaliculatus_F_contig1190:25349..29289 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score295.0
Seed ortholog evalue5e-77
Seed eggNOG ortholog2880.D7FZG5
Preferred nameYBEY
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464
EggNOG free text desc.metalloendopeptidase activity
EggNOG OGs2R6QZ@2759,COG0319@1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionEndoribonuclease YbeY
Ec32 orthologEc-19_003220.1
Exons6
Model size1277
Cds size1167
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928894.2533345-UTR-H-canaliculatus_F_contig1190:25348..254581622928894.2533345-UTR-H-canaliculatus_F_contig1190:25348..25458Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1190 25349..25458 +
1696845604.1431212-UTR-H-canaliculatus_F_contig1190:25348..254581696845604.1431212-UTR-H-canaliculatus_F_contig1190:25348..25458Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1190 25349..25458 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928894.2846375-CDS-H-canaliculatus_F_contig1190:25458..260761622928894.2846375-CDS-H-canaliculatus_F_contig1190:25458..26076Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1190 25459..26076 +
1696845604.155121-CDS-H-canaliculatus_F_contig1190:25458..260761696845604.155121-CDS-H-canaliculatus_F_contig1190:25458..26076Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1190 25459..26076 +
1622928894.3004034-CDS-H-canaliculatus_F_contig1190:26492..266061622928894.3004034-CDS-H-canaliculatus_F_contig1190:26492..26606Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1190 26493..26606 +
1696845604.1659164-CDS-H-canaliculatus_F_contig1190:26492..266061696845604.1659164-CDS-H-canaliculatus_F_contig1190:26492..26606Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1190 26493..26606 +
1622928894.3176944-CDS-H-canaliculatus_F_contig1190:27170..272631622928894.3176944-CDS-H-canaliculatus_F_contig1190:27170..27263Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1190 27171..27263 +
1696845604.1752331-CDS-H-canaliculatus_F_contig1190:27170..272631696845604.1752331-CDS-H-canaliculatus_F_contig1190:27170..27263Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1190 27171..27263 +
1622928894.3327386-CDS-H-canaliculatus_F_contig1190:27830..279111622928894.3327386-CDS-H-canaliculatus_F_contig1190:27830..27911Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1190 27831..27911 +
1696845604.1843817-CDS-H-canaliculatus_F_contig1190:27830..279111696845604.1843817-CDS-H-canaliculatus_F_contig1190:27830..27911Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1190 27831..27911 +
1622928894.3456032-CDS-H-canaliculatus_F_contig1190:28307..285081622928894.3456032-CDS-H-canaliculatus_F_contig1190:28307..28508Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1190 28308..28508 +
1696845604.192987-CDS-H-canaliculatus_F_contig1190:28307..285081696845604.192987-CDS-H-canaliculatus_F_contig1190:28307..28508Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1190 28308..28508 +
1622928894.3614876-CDS-H-canaliculatus_F_contig1190:29229..292891622928894.3614876-CDS-H-canaliculatus_F_contig1190:29229..29289Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1190 29230..29289 +
1696845604.2044795-CDS-H-canaliculatus_F_contig1190:29229..292891696845604.2044795-CDS-H-canaliculatus_F_contig1190:29229..29289Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1190 29230..29289 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1190.1672.1prot_H-canaliculatus_F_contig1190.1672.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1190 25459..29289 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1190.1672.1

>prot_H-canaliculatus_F_contig1190.1672.1 ID=prot_H-canaliculatus_F_contig1190.1672.1|Name=mRNA_H-canaliculatus_F_contig1190.1672.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=389bp
MVLQQARSHTLVLRSCRSQVLVATNPPTLSWVFPSAGSVQLPTFAKPLTP
TAAFPALDGFPCNASRSESSSTRGNRRQVMCGVPLGSGAPWSGFATSRGS
LWLPRTEPKLQPGAIMCDSRLGAYRLMSVSKPDGIEGTRAEVEKEDEGDG
LLASLADELVWRGGDEEDEDEDGGGDDEYEEYDSYEFDEGKGLEGLDLES
LGISMMDEASADDVQEELQRKWGTVSVENSQDEYEVDTAELQSKLRQAME
VLGCQAWDVGAVLTTDEEVARLNRQYRGIKSSTDILSFPNNDMSDNPGML
PKVRFPAEMDLGDMFISLAYVDRQIKRDKKEEAAAAAAAAAGHGEEGDHE
WWDSERGVSGAMSRVFNVQERGAKLLVRGLLHLLGFHHE
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mRNA from alignment at H-canaliculatus_F_contig1190:25349..29289+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1190.1672.1 ID=mRNA_H-canaliculatus_F_contig1190.1672.1|Name=mRNA_H-canaliculatus_F_contig1190.1672.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3941bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1190:25349..29289+ (Hapterophycus canaliculatus Oshoro5f female)
CCGGAACACCCACACAAACCACAATTTTGCGCCTAAAGAGGCACAAACAC
TAACAGCCTACCACATCTGGATCTACCCTTTACCGATACAAGCTTGCTGC
GTGAGGAAACATGGTTCTGCAGCAGGCCCGATCGCACACCCTAGTTCTCA
GGTCGTGTCGTTCCCAGGTGTTGGTCGCCACCAACCCTCCCACCCTTTCA
TGGGTCTTCCCCTCAGCTGGCAGCGTACAACTACCCACATTCGCCAAACC
TTTGACCCCAACAGCAGCATTTCCGGCGCTTGATGGTTTTCCGTGCAATG
CCAGTCGAAGCGAAAGCAGTAGCACCAGGGGAAACCGACGCCAGGTAATG
TGTGGAGTACCGCTGGGAAGCGGTGCACCGTGGTCAGGCTTTGCAACGAG
TAGAGGATCTCTGTGGCTACCGCGTACAGAGCCCAAGCTACAACCTGGAG
CAATCATGTGTGATTCTCGCCTCGGAGCTTACCGACTCATGTCCGTCTCG
AAGCCGGACGGTATAGAAGGCACTCGCGCTGAGGTTGAGAAGGAGGACGA
GGGAGATGGGCTTCTTGCTTCGTTGGCGGACGAGCTAGTCTGGAGAGGGG
GAGATGAGGAGGACGAGGACGAGGACGGTGGCGGGGACGACGAATACGAA
GAATACGACAGTTACGAGTTCGACGAGGGAAAGGGGCTGGAGGGATTGGA
TTTGGAGAGCTTGGGGATATCCATGATGGTGAGTGCTCTTGCTTTCGCGG
CGCGAGCATGCAACGTACAGCATGGCCGTGTTCTTGACATGAGAACTTGA
AACGAGACACCTCTTTCAAGCGACAGATTTGGGTGTTAATTGGTAAGTAA
TAGCCTGACTCGAGTGACCTTCGAGAGCGTCGCGACGTGGTCATGGCAAC
ACTCACGCCAACTACGGCTGCCCCCTGAGCACCTTTTGCGCGTCTTTCTC
CGCGTGCCGTTTGAGTTCCTCTATCGCAACTTCTCTACATGTAGGAATAG
TGGGAGCCACCTGCCCCACCTTGCTCTGAGAACGCCAAACAAGAGCATCG
TAGCGTTCAGATATGGATTTCGCGTGTCCGGGCGCTACTTGCACGATGCT
GAGACATTGCACCCGTGCGTGCTCTTTTCGTCTGTCGGATGAAGGACGAA
GCGAGTGCGGATGATGTGCAGGAAGAGCTGCAGCGTAAATGGGGAACAGT
GTCGGTGGAAAACAGTCAGGACGAATACGAGGTCGACACGGCTGAGCTGC
AGTCCAAGGTATGCAGCACGTCGAAAAAATCATGGAGTCGATGGCGCTCG
AACACGCAACAGTCGGCGCATCGAGCACGCGACAGTGGGTGTCCTGAAGT
CGTGTAGCACAGCGCAGCGGTACCTGGGCACTTGCATAGCCACGTTGGAT
CTTCCTCGAGGTTCGTTCAGCCTCGCGAGATGCTTTGCTCTGTACTCTCG
GAACCTAATGGCTTGTCACCGTCGTTGGATTCGCGCAAAGGGAAGCTCGC
GTGTCGTCGTACGGACATGCGAGGATCTCGTGGCAACCATCCCACCTCTG
AGATGCCCCGTTCTAGTGTGCGCGTCGGTACCGTCGTAGCAGCAGCGGCG
ATGCATTACCTCAGAGTCATCGCCGCGGCAGGCGCACGCATACTTTGAAT
TCTGGCGCGCATGCAAGCAAGGAAACTCGTTCTTACATCCGAACGCACCT
CCAATCCTCCCCCTGCGGCTCATGTTTGATGGGCATCGCGGGCGGGCGTG
GCGCGCTGCGGGGTCTGCCTGCTGCCTGCTGCTCTGCCGCCGCTCTAACC
CTCGACTGCGGTGCCTGTTAAGCTGAGACAAGCGATGGAAGTCCTGGGCT
GCCAGGCGTGGGATGTCGGGGCCGTGCTTACCACGGACGAGGAGGTGGCT
CGGCTCAACCGCCAGGTGAACAACGAGTTCCACAAGCTCTTGCCCGAAAC
GGCGAAGAGCCGCTTGTGCGAGAATAAGGTGGATACATATGTACGCGCGG
TAAGAAAACTCCACGCATGCGCATGCGCAGAGATGCGGATACGTTCGCGC
GCGCACCACAGGTGAGAGACGCCATGGATCAAGCCGGACGCCATGGGGCG
AAACGAAGCCAAGGGGAAATCACCCCCTGGAACGGTTCGCGAGAGCGCTG
CTGGATGTTCAGATAGAAAACTTGTTCCCTGAGCATCGAGGCCGTGGGCT
GGAAACCTGGCGAGCAAGCAAACTTTCGCGGCACCGTTTGTAATGCCTCC
CTCCGCACCGCGCCGTTTTGGTCTGTGCTCCTCCGCCGTGACGCGTGTGG
CTGAACAACCCTTGCAACACACTGGAGTCATAAACACAACCCGCCGCTGC
CCTCTGCGTAGCGTTACCTGCACAATTTAGCGGGCGGCTCGACATGCGCA
TGGTTTATTTCGGTCCTTGTGTTTTTTTACTGTTGCTCCGTGCTGCTTGC
TCTGTCTCTTCCACCCCCCTTCGTCCGTGCAGTACCGCGGGATAAAATCA
TCGACGGATATCTTGTCGTTTCCGAACAACGACATGTCCGACAACCCCGG
AATGCTCCCGAAGGTCTGCCAGAAGCGTATACGGGTCGGCTGGGCGACGA
GCATAGACAATATATTTCTCACCATATTTTCATGGATGGAATGGAGACGT
CTGATGTTCATTGCCCAACCCTAGACGTTCGTGGCTATATGCGTTCATTG
CTCATCGGCTGGATAATCGCGTACGGGCGCTCGTGGATTGTTTGCTGCTT
TTCAATCTTTATTTTATCAAGACCTGCGGGTGCTTTTGCTTTCTACTGAG
TGTCACAAGCAGTATGCCAAGTGCATACCTCCGCCATCTGTGTCCACCAC
GCCGGATATTACATCCGGCGCCTTGCAATAAATGTATCTATGCCATCCAA
GTTCACAACGGCTACCCGCCGCCGCTGTTGTCTCCGCGTTCCCCGGCACA
CACGTGCAGGTAAGATTTCCAGCGGAGATGGATCTCGGGGATATGTTCAT
CTCTTTGGCGTATGTCGACCGACAGATAAAGAGGGACAAAAAAGAGGAGG
CAGCGGCGGCGGCGGCGGCAGCGGCGGGGCACGGGGAAGAGGGGGACCAC
GAGTGGTGGGATAGCGAGAGGGGTGTCAGCGGCGCGATGTCGAGGGTTTT
CAACGTACAGGTAAACACGTGGTCCCTATACTTTTTTGCGAGCAGCTGCA
TGGTCAGGGTTCCAGGGAGGGGGGGAGAAGCGGAGGGCAGAGATCATCGG
GCGAAAGGGGAGAGGTTCCGCCCTCAGGCATCTTACGATTTCATTCGGCT
TTGTGCGGAGCTTGGGATACTTTTTTCACGCGAGCGTGTTTCTGTGTCAG
CAGTTTTGCGGTTGAGATTGTTCGATGTGCGGTTTGCCCTGCGACCGAAC
CCAATCCTGGCCCCCTCCACGGGTTGCGGTAGCTTGGTGCGCTCCCACCG
TCGGGATGGGCCGCCACGAGATCCGTCGATGGATCTGCGCAGCTTTCCTC
CGATGGCCGTGCGCTTCGTCGCTTATTTGTTTTGCTTTTGGGTACGTCGT
AGTCCGTTTCGTGCTAAATGCTAAGTGCTAACCCGGTGCCAACTGCCTGC
CGCCTTCAACGAAAGTCGAGGACGCTCCCGTAACCGATCCGAGAAAGGGC
GCCTTTCGAAAGCACTTCCTGGCTCTGGCGCTCTTTCGTTGTTTGTCGCT
GGGACCGAGTCTGCGCTTGCTCCGTTTGCAGCTGAAGTCTATCGGTGTGC
GCCTACGCGTTATGGATGTAGTTTTCAGCACTGTTGGTTTTGTTCAACCT
TCTTCCGTGCCCGCTTTCCACAACCCTTCCCCCCCCCCCCCCCCCCCCCC
CCTCGTCCCCCCCCCCCACCCCGGAAAAAAGGAGCGGGGGGCAAAGCTTC
TTGTGCGCGGCCTCCTCCACCTTTTGGGGTTCCATCACGAG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1190:25349..29289+

>mRNA_H-canaliculatus_F_contig1190.1672.1 ID=mRNA_H-canaliculatus_F_contig1190.1672.1|Name=mRNA_H-canaliculatus_F_contig1190.1672.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2334bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1190:25349..29289+ (Hapterophycus canaliculatus Oshoro5f female)
ATGGTTCTGCAGCAGGCCCGATCGCACACCCTAGTTCTCAGGTCGTGTCG
TTCCCAGGTGTTGGTCGCCACCAACCCTCCCACCCTTTCATGGGTCTTCC
CCTCAGCTGGCAGCGTACAACTACCCACATTCGCCAAACCTTTGACCCCA
ACAGCAGCATTTCCGGCGCTTGATGGTTTTCCGTGCAATGCCAGTCGAAG
CGAAAGCAGTAGCACCAGGGGAAACCGACGCCAGGTAATGTGTGGAGTAC
CGCTGGGAAGCGGTGCACCGTGGTCAGGCTTTGCAACGAGTAGAGGATCT
CTGTGGCTACCGCGTACAGAGCCCAAGCTACAACCTGGAGCAATCATGTG
TGATTCTCGCCTCGGAGCTTACCGACTCATGTCCGTCTCGAAGCCGGACG
GTATAGAAGGCACTCGCGCTGAGGTTGAGAAGGAGGACGAGGGAGATGGG
CTTCTTGCTTCGTTGGCGGACGAGCTAGTCTGGAGAGGGGGAGATGAGGA
GGACGAGGACGAGGACGGTGGCGGGGACGACGAATACGAAGAATACGACA
GTTACGAGTTCGACGAGGGAAAGGGGCTGGAGGGATTGGATTTGGAGAGC
TTGGGGATATCCATGATGATGGTTCTGCAGCAGGCCCGATCGCACACCCT
AGTTCTCAGGTCGTGTCGTTCCCAGGTGTTGGTCGCCACCAACCCTCCCA
CCCTTTCATGGGTCTTCCCCTCAGCTGGCAGCGTACAACTACCCACATTC
GCCAAACCTTTGACCCCAACAGCAGCATTTCCGGCGCTTGATGGTTTTCC
GTGCAATGCCAGTCGAAGCGAAAGCAGTAGCACCAGGGGAAACCGACGCC
AGGTAATGTGTGGAGTACCGCTGGGAAGCGGTGCACCGTGGTCAGGCTTT
GCAACGAGTAGAGGATCTCTGTGGCTACCGCGTACAGAGCCCAAGCTACA
ACCTGGAGCAATCATGTGTGATTCTCGCCTCGGAGCTTACCGACTCATGT
CCGTCTCGAAGCCGGACGGTATAGAAGGCACTCGCGCTGAGGTTGAGAAG
GAGGACGAGGGAGATGGGCTTCTTGCTTCGTTGGCGGACGAGCTAGTCTG
GAGAGGGGGAGATGAGGAGGACGAGGACGAGGACGGTGGCGGGGACGACG
AATACGAAGAATACGACAGTTACGAGTTCGACGAGGGAAAGGGGCTGGAG
GGATTGGATTTGGAGAGCTTGGGGATATCCATGATGGACGAAGCGAGTGC
GGATGATGTGCAGGAAGAGCTGCAGCGTAAATGGGGAACAGTGTCGGTGG
AAAACAGTCAGGACGAATACGAGGTCGACACGGCTGAGCTGCAGTCCAAG
GACGAAGCGAGTGCGGATGATGTGCAGGAAGAGCTGCAGCGTAAATGGGG
AACAGTGTCGGTGGAAAACAGTCAGGACGAATACGAGGTCGACACGGCTG
AGCTGCAGTCCAAGCTGAGACAAGCGATGGAAGTCCTGGGCTGCCAGGCG
TGGGATGTCGGGGCCGTGCTTACCACGGACGAGGAGGTGGCTCGGCTCAA
CCGCCAGCTGAGACAAGCGATGGAAGTCCTGGGCTGCCAGGCGTGGGATG
TCGGGGCCGTGCTTACCACGGACGAGGAGGTGGCTCGGCTCAACCGCCAG
TACCGCGGGATAAAATCATCGACGGATATCTTGTCGTTTCCGAACAACGA
CATGTCCGACAACCCCGGAATGCTCCCGAAGTACCGCGGGATAAAATCAT
CGACGGATATCTTGTCGTTTCCGAACAACGACATGTCCGACAACCCCGGA
ATGCTCCCGAAGGTAAGATTTCCAGCGGAGATGGATCTCGGGGATATGTT
CATCTCTTTGGCGTATGTCGACCGACAGATAAAGAGGGACAAAAAAGAGG
AGGCAGCGGCGGCGGCGGCGGCAGCGGCGGGGCACGGGGAAGAGGGGGAC
CACGAGTGGTGGGATAGCGAGAGGGGTGTCAGCGGCGCGATGTCGAGGGT
TTTCAACGTACAGGTAAGATTTCCAGCGGAGATGGATCTCGGGGATATGT
TCATCTCTTTGGCGTATGTCGACCGACAGATAAAGAGGGACAAAAAAGAG
GAGGCAGCGGCGGCGGCGGCGGCAGCGGCGGGGCACGGGGAAGAGGGGGA
CCACGAGTGGTGGGATAGCGAGAGGGGTGTCAGCGGCGCGATGTCGAGGG
TTTTCAACGTACAGGAGCGGGGGGCAAAGCTTCTTGTGCGCGGCCTCCTC
CACCTTTTGGGGTTCCATCACGAGGAGCGGGGGGCAAAGCTTCTTGTGCG
CGGCCTCCTCCACCTTTTGGGGTTCCATCACGAG
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