mRNA_H-canaliculatus_F_contig11898.1666.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig11898.1666.1
Unique NamemRNA_H-canaliculatus_F_contig11898.1666.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig11898.1666.1 vs. uniprot
Match: A0A6H5KNF0_9PHAE (FtsJ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNF0_9PHAE)

HSP 1 Score: 506 bits (1302), Expect = 1.540e-180
Identity = 251/271 (92.62%), Postives = 257/271 (94.83%), Query Frame = 1 
Query:    7 MGKRTKGQDRDKYYHLAKDQGYRARSAFKLIEINKKYDFLGSAKVCIDLCAAPGGWCQVAAKYMPRGSIILGVDLLPIRPIPNVKTLVHDITTDECRTALKREMQTWKADVVLCDGAPNVGTAYKKDAYEQNEIALHALRVATQHLKKGGTFVTKVYRSQDYNSLMWVIQQFFEEHQASDLSCEALAGAVKPASSRSQSAEIFVVGRNYKAPDFIDSRMLEPKHAFQQNYDVEGAQKGLSIFHKKYEQHNKRHRQGYAEDLGMTLSRVAKV 819
            MGKRTKGQDRDKYY LAKDQG+RARSAFKLIEINKKYDFL SAKVCIDLCAAPGGWCQVAAK+MPRGSIILGVDLLPIRPIPNVKTLVHDITTDECRTALKREMQTWKADVVLCDGAPNVGTAYKKDAYEQNEIALHALRVATQHLKKGGTFVTKVYRSQDYNSLMWVIQQFFEEHQA           VKPASSRSQSAEIFVVGRNYKAPDFIDSRMLEPKHAFQQ+YDVEG QKGLSIFHKKY+QHNKRHRQGYA+DLGM+LSRVAKV
Sbjct:    1 MGKRTKGQDRDKYYRLAKDQGFRARSAFKLIEINKKYDFLSSAKVCIDLCAAPGGWCQVAAKHMPRGSIILGVDLLPIRPIPNVKTLVHDITTDECRTALKREMQTWKADVVLCDGAPNVGTAYKKDAYEQNEIALHALRVATQHLKKGGTFVTKVYRSQDYNSLMWVIQQFFEEHQA-----------VKPASSRSQSAEIFVVGRNYKAPDFIDSRMLEPKHAFQQDYDVEGGQKGLSIFHKKYDQHNKRHRQGYADDLGMSLSRVAKV 260
[Close]
BLAST of mRNA_H-canaliculatus_F_contig11898.1666.1 vs. uniprot
Match: D7FSF8_ECTSI (Putative rRNA methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSF8_ECTSI)

HSP 1 Score: 506 bits (1302), Expect = 3.130e-170
Identity = 251/272 (92.28%), Postives = 258/272 (94.85%), Query Frame = 1 
Query:    7 MGKRTKGQDRDKYYHLAKDQGYRARSAFKLIEINKKYDFLGSAKVCIDLCAAPGGWCQVAAKYMPRGSIILGVDLLPIRPIPNVKTLVHDITTDECRTALKREMQTWKADVVLCDGAPNVGTAYKKDAYEQNEIALHALRVATQHLKKGGTFVTKVYRSQDYNSLMWVIQQFFEEHQASDLSCEALAGAVKPASSRSQSAEIFVVGRNYKAPDFIDSRMLEPKHAFQQNYDVEGAQKGLSIFHKKYEQHNKRHRQGYAEDLGMTLSRVAKVS 822
            MGKRTKGQDRDKYY LAKDQG+RARSAFKLIEINKKYDFL SAKVCIDLCAAPGGWCQVAAK+MPRGSIILGVDLLPIRPIPNVKTLVHDITTDECRTALKREMQTWKADVVLCDGAPNVGTAYKKDAYEQNEIALHALRVATQHLKKGGTFVTKVYRSQDYNSLMWVIQQFFEEHQA           VKPASSRSQSAEIFVVGRNYKAPDFIDSRMLEPKHAF+Q+YDVEG QKGLSIFHKKY+QHNKRHRQGYA+DLGM+LSRVAKVS
Sbjct:    1 MGKRTKGQDRDKYYRLAKDQGFRARSAFKLIEINKKYDFLSSAKVCIDLCAAPGGWCQVAAKHMPRGSIILGVDLLPIRPIPNVKTLVHDITTDECRTALKREMQTWKADVVLCDGAPNVGTAYKKDAYEQNEIALHALRVATQHLKKGGTFVTKVYRSQDYNSLMWVIQQFFEEHQA-----------VKPASSRSQSAEIFVVGRNYKAPDFIDSRMLEPKHAFRQDYDVEGGQKGLSIFHKKYDQHNKRHRQGYADDLGMSLSRVAKVS 261
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BLAST of mRNA_H-canaliculatus_F_contig11898.1666.1 vs. uniprot
Match: A0A835Z2H0_9STRA (Putative rRNA methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2H0_9STRA)

HSP 1 Score: 412 bits (1060), Expect = 9.280e-135
Identity = 201/273 (73.63%), Postives = 229/273 (83.88%), Query Frame = 1 
Query:    7 MGKRTKGQDRDKYYHLAKDQGYRARSAFKLIEINKKYDFLGSAKVCIDLCAAPGGWCQVAAKYMPRGSIILGVDLLPIRPIPNVKTLVHDITTDECRTALKREMQTWKADVVLCDGAPNVGTAYKKDAYEQNEIALHALRVATQHLKKGGTFVTKVYRSQDYNSLMWVIQQFFEEHQASDLSCEALAGAVKPASSRSQSAEIFVVGRNYKAPDFIDSRMLEPKHAFQQNYDVEGAQKGLSIFHKKYEQHNKRHRQGYAEDLGMTLSRVAKVSS 825
            MGKRTKGQDRDKYYHLAKDQGYRARSAFKLIEINK++DFL  AKV IDLCAAPGGWCQVAAK MP+G IILGVDLLPIRPIPNVKTL+ DITT+ECR+ +K+E+QTW+ADVVLCDGAPNVGTAY KDAY QNEIAL AL+VATQHL KGGTFVTKVYRSQDYN+L+W +QQFF+ +QA           VKPASSRSQSAEIF+VG  YK PD ID RML+PKH F Q Y+ EG  K +S+FHKK+++HNKRHR GY E LG  L+R   +++
Sbjct:    1 MGKRTKGQDRDKYYHLAKDQGYRARSAFKLIEINKRHDFLSKAKVVIDLCAAPGGWCQVAAKNMPKGGIILGVDLLPIRPIPNVKTLISDITTEECRSMIKKELQTWRADVVLCDGAPNVGTAYAKDAYVQNEIALAALKVATQHLMKGGTFVTKVYRSQDYNALLWTVQQFFDSYQA-----------VKPASSRSQSAEIFIVGMGYKDPDQIDPRMLDPKHIFDQGYE-EGMNKSISVFHKKFDKHNKRHRSGYDESLGQLLTRKGTITA 261
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BLAST of mRNA_H-canaliculatus_F_contig11898.1666.1 vs. uniprot
Match: A0A1V9YJQ3_9STRA (rRNA methyltransferase (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YJQ3_9STRA)

HSP 1 Score: 320 bits (821), Expect = 7.040e-106
Identity = 168/273 (61.54%), Postives = 202/273 (73.99%), Query Frame = 1 
Query:    7 MGKRTKGQDRDKYYHLAKDQGYRARSAFKLIEINKKYDFLGSAKVCIDLCAAPGGWCQVAAKYMPRGSIILGVDLLPIRPIPNVKTLVHDITTDECRTALKREMQTWKADVVLCDGAPNVGTAYKKDAYEQNEIALHALRVATQHLKKGGTFVTKVYRSQDYNSLMWVIQQFFEEHQASDLSCEALAGAVKPASSRSQSAEIFVVGRNYKAPDFIDSRMLEPKHAFQQ-NYDVEGAQKGLSIFHKKYEQHNKRHRQGYAEDLGMTLSRVAKVS 822
            M KR K  D+DKYY+LA+ QGYRARSAFKLI++NKKYDFL  AKVCIDLCAAPGGWCQVAAKYMP  SIILG+DLLPIRPI  VKT   DITT  CR  +++EMQ+W ADVVLCDGAPNVG  Y KDAY QNE+AL AL++A   + KG TFV+KV+RSQDYN+L+WV +Q F++             A KP SSR++SAEIFVV  +Y AP  ID ++L+P+H F Q   D E    GL+IFH K+ Q  KRHR+GY + LG TL++V  VS
Sbjct:    1 MVKRKK-HDKDKYYNLARQQGYRARSAFKLIQLNKKYDFLSKAKVCIDLCAAPGGWCQVAAKYMPASSIILGIDLLPIRPIRGVKTYQCDITTARCRQIIRQEMQSWNADVVLCDGAPNVGAEYSKDAYVQNELALIALKLAVDVMGKGATFVSKVFRSQDYNALVWVFKQLFKK-----------VSATKPLSSRNESAEIFVVCEDYIAPHSIDPKLLDPEHVFSQLEKDKES---GLTIFHPKFGQ-QKRHREGYDDALGQTLTKVLTVS 257
[Close]
BLAST of mRNA_H-canaliculatus_F_contig11898.1666.1 vs. uniprot
Match: K8YV02_NANGC (Et-dependent rrna methyltransferase spb1 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YV02_NANGC)

HSP 1 Score: 324 bits (831), Expect = 4.190e-105
Identity = 173/276 (62.68%), Postives = 202/276 (73.19%), Query Frame = 1 
Query:   13 KRTKGQDRDKYYHLAKDQGYRARSAFKLIEINKKYDFLGSAKVCIDLCAAPGGWCQVAAKYMPRGSIILGVDLLPIRPIPNVKTLVHDITTDECRTALKREMQTWK-ADVVLCDGAPNVGTAYKKDAYEQNEIALHALRVATQHLKKGGTFVTKVYRSQDYNSLMWVIQQFFEEHQASDLSCEALAGAVKPASSRSQSAEIFVVGRNYKAPDFIDSRMLEPKHAFQQNYDVEGAQ--KGLSIFHKKYEQHNKRHRQGYAEDLGMTLSRVAKVSSDL 831
            KR K  D+DKYYHLAK+QGYR+R+AFKLI+IN+KYDFL  AKVC+DLCAAPGGWCQVAAK+MP  SIILGVDLLPIRPI  VKTLVHDITT ECR A+KREM+     DVVLCDGAPNVG  Y KDA+ QNEIAL ALR AT HL  GGTF+TKVYRSQDYN+LMWV  Q F   QA           +KP+SSR QSAEIFV+   YKAP  ID ++L+P + F    ++EG    K +SIF  +Y +  KRHR GY  + G+ L R A V++ L
Sbjct:    6 KRKKRHDKDKYYHLAKEQGYRSRAAFKLIQINRKYDFLSKAKVCLDLCAAPGGWCQVAAKHMPSDSIILGVDLLPIRPIAKVKTLVHDITTPECRAAVKREMRAHPHVDVVLCDGAPNVGATYDKDAFVQNEIALAALRAATCHLGPGGTFLTKVYRSQDYNALMWVFNQLFASVQA-----------IKPSSSRQQSAEIFVLCLRYKAPHSIDPKLLDPAYVFA---EMEGGSGDKAISIFSAQYAR-QKRHRSGYDGEAGVLLHRKASVTAFL 266
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BLAST of mRNA_H-canaliculatus_F_contig11898.1666.1 vs. uniprot
Match: A0A3R7WEH2_9STRA (FtsJ domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7WEH2_9STRA)

HSP 1 Score: 311 bits (796), Expect = 4.600e-103
Identity = 162/272 (59.56%), Postives = 199/272 (73.16%), Query Frame = 1 
Query:    7 MGKRTKGQDRDKYYHLAKDQGYRARSAFKLIEINKKYDFLGSAKVCIDLCAAPGGWCQVAAKYMPRGSIILGVDLLPIRPIPNVKTLVHDITTDECRTALKREMQTWKADVVLCDGAPNVGTAYKKDAYEQNEIALHALRVATQHLKKGGTFVTKVYRSQDYNSLMWVIQQFFEEHQASDLSCEALAGAVKPASSRSQSAEIFVVGRNYKAPDFIDSRMLEPKHAFQQNYDVEGAQKGLSIFHKKYEQHNKRHRQGYAEDLGMTLSRVAKVS 822
            M KR K  D+DKYY+LA+ QGYRARSAFKLI++NKKYDFL  AKVCIDLCAAPGGWCQVAAKYMP  SIILG+DLLPIRPI  VKT   DITT  CR  +K+EMQ+W ADVVLCDGAPNVG+ Y KDAY QNE+AL AL++A   + KGGTFV+KV+RSQDYN+L+WV +Q F++             A KP SSR++SAEIFVV  +Y AP  ID ++L+P+H F Q    + +   L+IFH KY Q  KRHR+G      +  + +++VS
Sbjct:    1 MVKRKK-HDKDKYYNLARQQGYRARSAFKLIQLNKKYDFLSKAKVCIDLCAAPGGWCQVAAKYMPASSIILGIDLLPIRPIRGVKTYECDITTARCRQIIKQEMQSWSADVVLCDGAPNVGSEYSKDAYVQNELALIALKLAVDVMGKGGTFVSKVFRSQDYNALLWVFKQLFKK-----------VSATKPLSSRNESAEIFVVCEDYLAPHSIDPKLLDPEHVFAQLEKEKDS--ALTIFHPKYGQ-QKRHREGNVVAFSVMSASLSRVS 257
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BLAST of mRNA_H-canaliculatus_F_contig11898.1666.1 vs. uniprot
Match: A0A024TJC0_9STRA (Putative rRNA methyltransferase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TJC0_9STRA)

HSP 1 Score: 327 bits (839), Expect = 1.360e-102
Identity = 170/272 (62.50%), Postives = 203/272 (74.63%), Query Frame = 1 
Query:    7 MGKRTKGQDRDKYYHLAKDQGYRARSAFKLIEINKKYDFLGSAKVCIDLCAAPGGWCQVAAKYMPRGSIILGVDLLPIRPIPNVKTLVHDITTDECRTALKREMQTWKADVVLCDGAPNVGTAYKKDAYEQNEIALHALRVATQHLKKGGTFVTKVYRSQDYNSLMWVIQQFFEEHQASDLSCEALAGAVKPASSRSQSAEIFVVGRNYKAPDFIDSRMLEPKHAFQQNYDVEGAQKGLSIFHKKYEQHNKRHRQGYAEDLGMTLSRVAKVS 822
            M KR K  D+DKYY+LA+ QGYRARSAFKLI++NKKYDFL  AKVCIDLCAAPGGWCQVAAKYMP  SIILG+DLLPIRPI  VKT   DITT  CR  +K+EMQ+W ADVVLCDGAPNVG+ Y KDAY QNE+AL AL++A   + KGGTFV+KV+RSQDYN+L+WV +Q F++             A KP SSR++SAEIFVV  +Y AP  ID ++L+P+H F Q    + +  GL+IFH KY Q  KRHR+GY E LG TL+R   VS
Sbjct:    1 MVKRKK-HDKDKYYNLARQQGYRARSAFKLIQLNKKYDFLSKAKVCIDLCAAPGGWCQVAAKYMPASSIILGIDLLPIRPIRGVKTYECDITTARCRQIIKQEMQSWSADVVLCDGAPNVGSEYSKDAYVQNELALIALKLAVDVMGKGGTFVSKVFRSQDYNALLWVFKQLFKK-----------VSATKPLSSRNESAEIFVVCEDYLAPHSIDPKLLDPEHVFAQLEKEKDS--GLTIFHPKYGQ-QKRHREGYDESLGQTLTRTLTVS 257
[Close]
BLAST of mRNA_H-canaliculatus_F_contig11898.1666.1 vs. uniprot
Match: A0A6G0X934_9STRA (Putative rRNA methyltransferase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X934_9STRA)

HSP 1 Score: 325 bits (834), Expect = 7.130e-102
Identity = 169/271 (62.36%), Postives = 202/271 (74.54%), Query Frame = 1 
Query:    7 MGKRTKGQDRDKYYHLAKDQGYRARSAFKLIEINKKYDFLGSAKVCIDLCAAPGGWCQVAAKYMPRGSIILGVDLLPIRPIPNVKTLVHDITTDECRTALKREMQTWKADVVLCDGAPNVGTAYKKDAYEQNEIALHALRVATQHLKKGGTFVTKVYRSQDYNSLMWVIQQFFEEHQASDLSCEALAGAVKPASSRSQSAEIFVVGRNYKAPDFIDSRMLEPKHAFQQNYDVEGAQKGLSIFHKKYEQHNKRHRQGYAEDLGMTLSRVAKV 819
            M KR K  D+DKYY+LA+ QGYRARSAFKLI+INKKYDFL  AKVCIDLCAAPGGWCQVAAKYMP  SIILG+DLLPIRPI  VKT   DITT  CR  +K+EMQ+W ADVVLCDGAPNVG+ Y KDAY QNE+AL AL++A   + KG TFV+KV+RSQDYNSL+WV +Q F++             A KP SSR++SAEIFVV  +Y AP  ID ++L+P+H F Q    +    GL+IFH KY Q  KRHR+GY + LG+TL+R+  V
Sbjct:    1 MVKRKK-HDKDKYYNLARQQGYRARSAFKLIQINKKYDFLSKAKVCIDLCAAPGGWCQVAAKYMPASSIILGIDLLPIRPIRGVKTYECDITTARCRQIIKQEMQSWSADVVLCDGAPNVGSEYSKDAYVQNELALVALKLAVDVMGKGATFVSKVFRSQDYNSLLWVFKQLFKK-----------VSATKPLSSRNESAEIFVVCEDYLAPHSIDPKLLDPEHVFAQLEKDKDT--GLTIFHPKYGQ-QKRHREGYDDSLGLTLTRILTV 256
[Close]
BLAST of mRNA_H-canaliculatus_F_contig11898.1666.1 vs. uniprot
Match: A0A5D6Y2J9_9STRA (Putative rRNA methyltransferase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y2J9_9STRA)

HSP 1 Score: 325 bits (834), Expect = 7.420e-102
Identity = 166/272 (61.03%), Postives = 206/272 (75.74%), Query Frame = 1 
Query:    7 MGKRTKGQDRDKYYHLAKDQGYRARSAFKLIEINKKYDFLGSAKVCIDLCAAPGGWCQVAAKYMPRGSIILGVDLLPIRPIPNVKTLVHDITTDECRTALKREMQTWKADVVLCDGAPNVGTAYKKDAYEQNEIALHALRVATQHLKKGGTFVTKVYRSQDYNSLMWVIQQFFEEHQASDLSCEALAGAVKPASSRSQSAEIFVVGRNYKAPDFIDSRMLEPKHAFQQNYDVEGAQKGLSIFHKKYEQHNKRHRQGYAEDLGMTLSRVAKVS 822
            M KR K  D+DKYY+LA+ QGYRARSAFKLI++NKKYDFL +AKVCIDLCAAPGGWCQVAAKYMP  SII+G+DLLPIRPI  VKT   DITT +CR  +K+EMQ+W+ADVVLCDGAPNVG  Y KDAY QNE+AL AL++A   + +GGTFV+KV+RSQDYN+L+WV +Q F++             A KP SSR++SAEIFVV  +Y AP  IDS++ +PK+ F Q   VE  +K ++IFH K+    KRHR+GY + LGMTL+  + VS
Sbjct:    1 MVKRKK-HDKDKYYNLARQQGYRARSAFKLIQLNKKYDFLSTAKVCIDLCAAPGGWCQVAAKYMPASSIIIGIDLLPIRPIRGVKTFQCDITTAKCRQIIKQEMQSWQADVVLCDGAPNVGAEYTKDAYVQNELALVALKLAVDVMGRGGTFVSKVFRSQDYNALLWVFKQLFKK-----------VSATKPLSSRNESAEIFVVCEDYLAPHSIDSKLFDPKYVFDQ---VESQEKSITIFHPKFGD-RKRHREGYDDALGMTLTNESSVS 256
[Close]
BLAST of mRNA_H-canaliculatus_F_contig11898.1666.1 vs. uniprot
Match: A0A067C154_SAPPC (Putative rRNA methyltransferase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C154_SAPPC)

HSP 1 Score: 323 bits (829), Expect = 3.580e-101
Identity = 168/273 (61.54%), Postives = 202/273 (73.99%), Query Frame = 1 
Query:    7 MGKRTKGQDRDKYYHLAKDQGYRARSAFKLIEINKKYDFLGSAKVCIDLCAAPGGWCQVAAKYMPRGSIILGVDLLPIRPIPNVKTLVHDITTDECRTALKREMQTWKADVVLCDGAPNVGTAYKKDAYEQNEIALHALRVATQHLKKGGTFVTKVYRSQDYNSLMWVIQQFFEEHQASDLSCEALAGAVKPASSRSQSAEIFVVGRNYKAPDFIDSRMLEPKHAFQQ-NYDVEGAQKGLSIFHKKYEQHNKRHRQGYAEDLGMTLSRVAKVS 822
            M KR K  D+DKYY+LA+ QGYRARSAFKLI++NKKYDFL  AKVCIDLCAAPGGWCQVAAKYMP  SIILG+DLLPIRPI  VKT   DITT  CR  +++EMQ+W ADVVLCDGAPNVG  Y KDAY QNE+AL AL++A   + KG TFV+KV+RSQDYN+L+WV +Q F++             A KP SSR++SAEIFVV  +Y AP  ID ++L+P+H F     D EG   GL+IFH KY    KRHR+GY +DLG TL+RV  ++
Sbjct:    1 MVKRKK-HDKDKYYNLARQQGYRARSAFKLIQLNKKYDFLSKAKVCIDLCAAPGGWCQVAAKYMPASSIILGIDLLPIRPIRGVKTYQCDITTARCRQIIRQEMQSWNADVVLCDGAPNVGAEYSKDAYVQNELALIALKLAVDVMGKGATFVSKVFRSQDYNALVWVFKQLFKK-----------VSATKPLSSRNESAEIFVVCEDYLAPHSIDPKLLDPEHVFSALEKDAEG---GLTIFHPKYGT-QKRHREGYDDDLGQTLTRVKTIT 257
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11898.1666.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KNF0_9PHAE1.540e-18092.62FtsJ domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FSF8_ECTSI3.130e-17092.28Putative rRNA methyltransferase n=1 Tax=Ectocarpus... [more]
A0A835Z2H0_9STRA9.280e-13573.63Putative rRNA methyltransferase n=1 Tax=Tribonema ... [more]
A0A1V9YJQ3_9STRA7.040e-10661.54rRNA methyltransferase (Fragment) n=1 Tax=Thrausto... [more]
K8YV02_NANGC4.190e-10562.68Et-dependent rrna methyltransferase spb1 (Fragment... [more]
A0A3R7WEH2_9STRA4.600e-10359.56FtsJ domain-containing protein n=1 Tax=Aphanomyces... [more]
A0A024TJC0_9STRA1.360e-10262.50Putative rRNA methyltransferase n=2 Tax=Aphanomyce... [more]
A0A6G0X934_9STRA7.130e-10262.36Putative rRNA methyltransferase n=1 Tax=Aphanomyce... [more]
A0A5D6Y2J9_9STRA7.420e-10261.03Putative rRNA methyltransferase n=1 Tax=Pythium br... [more]
A0A067C154_SAPPC3.580e-10161.54Putative rRNA methyltransferase n=3 Tax=Saprolegni... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig11898contigH-canaliculatus_F_contig11898:395..2869 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score508.8
Seed ortholog evalue1.5e-141
Seed eggNOG ortholog2880.D7FSF8
Preferred nameSPB1
KEGG koko:K14857
GOsGO:0000154,GO:0000460,GO:0000463,GO:0000466,GO:0000470,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008650,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016436,GO:0016740,GO:0016741,GO:0022613,GO:0030684,GO:0030687,GO:0031167,GO:0031974,GO:0031981,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042273,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360,GO:1990904
EggNOG free text desc.Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily
EggNOG OGsCOG0293@1,KOG1098@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03009
Hectar predicted targeting categoryother localisation
Exons5
Model size831
Cds size825
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig11898.1666.1prot_H-canaliculatus_F_contig11898.1666.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig11898 395..2863 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928892.9986987-CDS-H-canaliculatus_F_contig11898:394..5191622928892.9986987-CDS-H-canaliculatus_F_contig11898:394..519Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11898 395..519 -
1696845603.5457528-CDS-H-canaliculatus_F_contig11898:394..5191696845603.5457528-CDS-H-canaliculatus_F_contig11898:394..519Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11898 395..519 -
1622928893.0141926-CDS-H-canaliculatus_F_contig11898:775..9111622928893.0141926-CDS-H-canaliculatus_F_contig11898:775..911Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11898 776..911 -
1696845603.5564466-CDS-H-canaliculatus_F_contig11898:775..9111696845603.5564466-CDS-H-canaliculatus_F_contig11898:775..911Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11898 776..911 -
1622928893.0608692-CDS-H-canaliculatus_F_contig11898:1302..15421622928893.0608692-CDS-H-canaliculatus_F_contig11898:1302..1542Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11898 1303..1542 -
1696845603.5656083-CDS-H-canaliculatus_F_contig11898:1302..15421696845603.5656083-CDS-H-canaliculatus_F_contig11898:1302..1542Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11898 1303..1542 -
1622928893.077787-CDS-H-canaliculatus_F_contig11898:2205..24331622928893.077787-CDS-H-canaliculatus_F_contig11898:2205..2433Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11898 2206..2433 -
1696845603.5752285-CDS-H-canaliculatus_F_contig11898:2205..24331696845603.5752285-CDS-H-canaliculatus_F_contig11898:2205..2433Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11898 2206..2433 -
1622928893.0964386-CDS-H-canaliculatus_F_contig11898:2767..28631622928893.0964386-CDS-H-canaliculatus_F_contig11898:2767..2863Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11898 2768..2863 -
1696845603.5843766-CDS-H-canaliculatus_F_contig11898:2767..28631696845603.5843766-CDS-H-canaliculatus_F_contig11898:2767..2863Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11898 2768..2863 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928893.1127565-UTR-H-canaliculatus_F_contig11898:2863..28691622928893.1127565-UTR-H-canaliculatus_F_contig11898:2863..2869Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig11898 2864..2869 -
1696845603.5943394-UTR-H-canaliculatus_F_contig11898:2863..28691696845603.5943394-UTR-H-canaliculatus_F_contig11898:2863..2869Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig11898 2864..2869 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig11898.1666.1

>prot_H-canaliculatus_F_contig11898.1666.1 ID=prot_H-canaliculatus_F_contig11898.1666.1|Name=mRNA_H-canaliculatus_F_contig11898.1666.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=275bp
MGKRTKGQDRDKYYHLAKDQGYRARSAFKLIEINKKYDFLGSAKVCIDLC
AAPGGWCQVAAKYMPRGSIILGVDLLPIRPIPNVKTLVHDITTDECRTAL
KREMQTWKADVVLCDGAPNVGTAYKKDAYEQNEIALHALRVATQHLKKGG
TFVTKVYRSQDYNSLMWVIQQFFEEHQASDLSCEALAGAVKPASSRSQSA
EIFVVGRNYKAPDFIDSRMLEPKHAFQQNYDVEGAQKGLSIFHKKYEQHN
KRHRQGYAEDLGMTLSRVAKVSSDL
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mRNA from alignment at H-canaliculatus_F_contig11898:395..2869-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig11898.1666.1 ID=mRNA_H-canaliculatus_F_contig11898.1666.1|Name=mRNA_H-canaliculatus_F_contig11898.1666.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2475bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11898:395..2869- (Hapterophycus canaliculatus Oshoro5f female)
GCAATCATGGGCAAGAGGACTAAGGGACAAGACCGTGATAAATACTATCA
TCTTGCCAAAGATCAGGGCTACCGCGCACGTTCAGCATTCAAGCTCATCG
AGGTACGTGAGTTGAAAGAGAGATTGGTTGCCACAGTTTTCCACGGTCAG
GCCGCCGCGGCACGGCACAGCTCTCACAACGCCCCATGCGCCTGCCAGTT
CGTGTGTAGGTTGCAAACCCCGCGAACTTGTCTCCTGAAAGCGCATCAGA
TCACTCGCACAGTGTTGCTGATGACTGAGCCAAGAAGTTGTTGGTTACAT
CGGAGCTATCCCGTCACAACCCATTCCCTTTTCTCTACCACCGAAATGTG
ACACCTTTCTTTCATCCCCTCCTTGTCGTTCTCTCCACCCCACGACGACC
GCCCCTCCTCTCCCTCTCGGACGCCTACCTCCCCAGATCAACAAAAAGTA
TGACTTCCTCGGCTCGGCGAAGGTTTGCATCGATCTGTGTGCCGCCCCCG
GCGGGTGGTGCCAGGTCGCTGCCAAGTACATGCCCCGTGGGAGCATAATC
CTTGGCGTGGATTTGCTTCCCATCCGCCCTATCCCCAACGTGAAGACCCT
CGTCCATGACATCACCACGGATGAGTGCCGCACCGCCTTGAAGCGCGAGA
TGCAGACGTGGAAGGTGAGAGGGAGCTCGGGTGGGCGGCTGGGCCGTTCA
GCTACTGCTGTGGGTGTACAGAGCGGTGCCGGATTTACGGGGCTGCTAGC
ATGCCTTTCTGGGTCTTGCGTCCGGGCCGCGACATGTCTTTTTTTTGTCT
CGTTCGAAGAGAGTGGGTGGCTGTGGCGTTCTTGCCGGCGCTATTCTCAT
CTTCACGACATCTTCACAACATCCAAGGGTATCTGCTATCTGCACCACAC
CATCGTGTGCCCCACGGTGCCCTAAATGTTTCAGCTGTCCACCCATTTGA
CTTTGATCGTGAAGTGTGGGTAACTGAGCAATAGCGCGCACGGAGATTTC
AAGTGCCCGCGTCGACAGCAGCTGCGTTGCCTTGACTTTCAACTATTCGT
GTGCTTCGTAACTTCTTGATCCCACTTGCGAAGCGTAACTCTCGCCAGAT
ACCCGTACTGCAGACAGGATGGCTTCAAACGCGCCTCTCGATGAGGTTCT
CCACAACACTGATGCGTTGCAACGGCTGCCACCTCCAGGGCGGCCCCTAC
CTTCTTCAACTACCATAAAGTCGCCCGCATTCTCGCTACCCTAAGCTTGA
CGCATGATAGCACCCCCCCTGAGCGCAGCCATTCTCGCACTCTGCTGCCC
TGTTCCTTCGTGCCCTTCCGTCAACAGGCGGATGTGGTGCTATGCGACGG
TGCCCCCAACGTAGGCACAGCCTACAAGAAAGACGCCTACGAGCAAAACG
AGATCGCTCTCCATGCGCTGCGCGTTGCCACCCAGCACCTGAAAAAGGGG
GGCACTTTTGTAACCAAGGTCTACCGGTCGCAAGACTACAACTCGCTTAT
GTGGGTCATCCAGCAGTTCTTCGAGGAGCACCAGGCAAGCGATTTGTCGT
GTGAAGCGCTGGCTGGTGTCGTTTGCGATTCACGTTTGTCGTCAGGGGCT
TCACTGAGCTGTCGCCGTGGGCACCCCACCTTACAAGTACACCCTTGTTG
ACTTTCGTCACGGACCGAGAGGCATCATGGGATCTCTCGGCACCCCAAAA
GAAGGGGGTGCGTTTTTCGTATAACGGTAGCTTGATTTGGAGGTTGGTGT
CTCTCGGTTCTCTGCAGCGCGTGAGATCTTCGCGTAAAGAACTCACCGGT
GCAGGTGGCAACCAAGCTTGCCGGCCGAAGTTGTTGCGGAGATGAGCCAT
TGGGTTCTTCGCGAAATGAGACAAATCCGCTCTGCTGCCATAGACGCGGG
AACGTCCCGACCATTAACAGTGAATTTCCCGCTGCCGCACATCTCGCGTC
TGTTGCAGGCGGTCAAGCCCGCCTCCAGTCGAAGCCAGTCGGCCGAAATC
TTCGTGGTCGGTCGCAACTACAAGGCGCCGGACTTCATCGACTCCCGCAT
GCTCGAGCCGAAGCACGCCTTCCAGCAGAACTACGACGTAGAAGGTTAGT
TCCGAGCATACCTGTACAAGAGAAGTTCTGCTGGTAAAATAGAAGCTGTT
ATTTCCCCATCATATTGCCCGAGTGGTCGTAGACATGTCTGATTGTCGTT
GCGGCGATGCGTCGTACCGAAACTACATGACGGTGGCGATCAAAAGCGAA
CTCTGGAAAAACGCCTGGGAGGAGATGCAACGCTCGGCGACTCACTCACC
TGTCCTGTCACGGTTCGTTTCGGCACCACGGCTTTGAACTCCTCCCACAG
GTGCTCAAAAGGGGCTTTCGATCTTCCACAAAAAGTATGAGCAGCATAAC
AAGCGACACCGTCAGGGGTATGCCGAGGACCTTGGGATGACTCTCAGCCG
GGTGGCGAAGGTAAGCTCCGACTTG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11898:395..2869-

>mRNA_H-canaliculatus_F_contig11898.1666.1 ID=mRNA_H-canaliculatus_F_contig11898.1666.1|Name=mRNA_H-canaliculatus_F_contig11898.1666.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1650bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11898:395..2869- (Hapterophycus canaliculatus Oshoro5f female)
ATGGGCAAGAGGACTAAGGGACAAGACCGTGATAAATACTATCATCTTGC
CAAAGATCAGGGCTACCGCGCACGTTCAGCATTCAAGCTCATCGAGATGG
GCAAGAGGACTAAGGGACAAGACCGTGATAAATACTATCATCTTGCCAAA
GATCAGGGCTACCGCGCACGTTCAGCATTCAAGCTCATCGAGATCAACAA
AAAGTATGACTTCCTCGGCTCGGCGAAGGTTTGCATCGATCTGTGTGCCG
CCCCCGGCGGGTGGTGCCAGGTCGCTGCCAAGTACATGCCCCGTGGGAGC
ATAATCCTTGGCGTGGATTTGCTTCCCATCCGCCCTATCCCCAACGTGAA
GACCCTCGTCCATGACATCACCACGGATGAGTGCCGCACCGCCTTGAAGC
GCGAGATGCAGACGTGGAAGATCAACAAAAAGTATGACTTCCTCGGCTCG
GCGAAGGTTTGCATCGATCTGTGTGCCGCCCCCGGCGGGTGGTGCCAGGT
CGCTGCCAAGTACATGCCCCGTGGGAGCATAATCCTTGGCGTGGATTTGC
TTCCCATCCGCCCTATCCCCAACGTGAAGACCCTCGTCCATGACATCACC
ACGGATGAGTGCCGCACCGCCTTGAAGCGCGAGATGCAGACGTGGAAGGC
GGATGTGGTGCTATGCGACGGTGCCCCCAACGTAGGCACAGCCTACAAGA
AAGACGCCTACGAGCAAAACGAGATCGCTCTCCATGCGCTGCGCGTTGCC
ACCCAGCACCTGAAAAAGGGGGGCACTTTTGTAACCAAGGTCTACCGGTC
GCAAGACTACAACTCGCTTATGTGGGTCATCCAGCAGTTCTTCGAGGAGC
ACCAGGCAAGCGATTTGTCGTGTGAAGCGCTGGCTGGTGCGGATGTGGTG
CTATGCGACGGTGCCCCCAACGTAGGCACAGCCTACAAGAAAGACGCCTA
CGAGCAAAACGAGATCGCTCTCCATGCGCTGCGCGTTGCCACCCAGCACC
TGAAAAAGGGGGGCACTTTTGTAACCAAGGTCTACCGGTCGCAAGACTAC
AACTCGCTTATGTGGGTCATCCAGCAGTTCTTCGAGGAGCACCAGGCAAG
CGATTTGTCGTGTGAAGCGCTGGCTGGTGCGGTCAAGCCCGCCTCCAGTC
GAAGCCAGTCGGCCGAAATCTTCGTGGTCGGTCGCAACTACAAGGCGCCG
GACTTCATCGACTCCCGCATGCTCGAGCCGAAGCACGCCTTCCAGCAGAA
CTACGACGTAGAAGGCGGTCAAGCCCGCCTCCAGTCGAAGCCAGTCGGCC
GAAATCTTCGTGGTCGGTCGCAACTACAAGGCGCCGGACTTCATCGACTC
CCGCATGCTCGAGCCGAAGCACGCCTTCCAGCAGAACTACGACGTAGAAG
GTGCTCAAAAGGGGCTTTCGATCTTCCACAAAAAGTATGAGCAGCATAAC
AAGCGACACCGTCAGGGGTATGCCGAGGACCTTGGGATGACTCTCAGCCG
GGTGGCGAAGGTAAGCTCCGACTTGGTGCTCAAAAGGGGCTTTCGATCTT
CCACAAAAAGTATGAGCAGCATAACAAGCGACACCGTCAGGGGTATGCCG
AGGACCTTGGGATGACTCTCAGCCGGGTGGCGAAGGTAAGCTCCGACTTG
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