mRNA_H-canaliculatus_F_contig11826.1615.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig11826.1615.1 vs. uniprot
Match: A0A6H5KAD0_9PHAE (Asparagine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KAD0_9PHAE) HSP 1 Score: 406 bits (1044), Expect = 1.880e-137 Identity = 203/258 (78.68%), Postives = 214/258 (82.95%), Query Frame = 1
Query: 1 THTVPLLLSVLSLRIQATHDFFRGEGFLYLQSPIITASDCEGAGEMFRVTTLPSEVSKVPTLEDGSTDYSKDFFGKPAFLTVSGQLSGETHACAMGDVYTFGPTFRAENSQTARHLAEFWMIEPEMSFADLRDDMDNAEAFVKHVVAHAMEVCGPDLEFFNKFYDKQLLERLQRIKDKPFVR---------------------------------TEHERWLAETRYDTAVFVYDYPRDIKAFYMRDNEDGKTVAAMD 675
T+T+ + V S QATHDFFR EGFLYLQSPIITASDCEGAGEMFRVTTLPSEVSKVPTLEDGSTDY++DFFGKPAFLTVSGQLSGETHACA+GDVYTFGPTFRAENSQT RHLAEFWMIEPEMSFADLRDDMDNAEAFVKHVV+HAMEVCG DLEFFNKFYDK+LL+RLQRIKDKPFVR TEHERWLAETRY+TAVFVYDYPRDIKAFYMRDN+DGKTVAAMD
Sbjct: 243 TNTIAAVARVRSALAQATHDFFRAEGFLYLQSPIITASDCEGAGEMFRVTTLPSEVSKVPTLEDGSTDYAQDFFGKPAFLTVSGQLSGETHACALGDVYTFGPTFRAENSQTTRHLAEFWMIEPEMSFADLRDDMDNAEAFVKHVVSHAMEVCGSDLEFFNKFYDKELLQRLQRIKDKPFVRVRYADAVTALQEEIAKDPSKWAFPDVSFGTDLQTEHERWLAETRYNTAVFVYDYPRDIKAFYMRDNDDGKTVAAMD 500
BLAST of mRNA_H-canaliculatus_F_contig11826.1615.1 vs. uniprot
Match: A0A7S0YYM8_9CRYP (Asparagine--tRNA ligase (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YYM8_9CRYP) HSP 1 Score: 321 bits (822), Expect = 6.080e-105 Identity = 157/258 (60.85%), Postives = 187/258 (72.48%), Query Frame = 1
Query: 1 THTVPLLLSVLSLRIQATHDFFRGEGFLYLQSPIITASDCEGAGEMFRVTTLPSEVSKVPTLEDGSTDYSKDFFGKPAFLTVSGQLSGETHACAMGDVYTFGPTFRAENSQTARHLAEFWMIEPEMSFADLRDDMDNAEAFVKHVVAHAMEVCGPDLEFFNKFYDKQLLERLQRIKDKPFVR---------------------------------TEHERWLAETRYDTAVFVYDYPRDIKAFYMRDNEDGKTVAAMD 675
T+T+ + V S QATH FF+G+GF Y+Q+P+ITASDCEGAGE+FRVTTLPSEVSK+P E G DYS+DFF KPA+LT SGQLS ET+A A+GDVYTFGPTFRAENSQT +HLAEFWMIEPE++F DL DM NAE FVK+VV H ++ C DL+FFN+FYDK LLERL + +KPF R TEHERWL+ET++ A FVY+YPR+IKAFYMRDN+DGKTVAAMD
Sbjct: 227 TNTIASVSRVRSALAQATHQFFQGKGFFYVQTPLITASDCEGAGELFRVTTLPSEVSKIPKTEGGQIDYSEDFFSKPAYLTCSGQLSAETYASALGDVYTFGPTFRAENSQTTKHLAEFWMIEPELAFCDLEGDMQNAEDFVKYVVKHVIDTCPEDLDFFNQFYDKGLLERLDALVNKPFARVTYTEAVELLQEEIAKDPSKWQFPDVKFGTDLQTEHERWLSETKFGAATFVYNYPREIKAFYMRDNDDGKTVAAMD 484
BLAST of mRNA_H-canaliculatus_F_contig11826.1615.1 vs. uniprot
Match: A0A7S2RZ04_9STRA (Asparagine--tRNA ligase (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RZ04_9STRA) HSP 1 Score: 313 bits (802), Expect = 1.460e-104 Identity = 158/258 (61.24%), Postives = 186/258 (72.09%), Query Frame = 1
Query: 1 THTVPLLLSVLSLRIQATHDFFRGEGFLYLQSPIITASDCEGAGEMFRVTTLPSEVSKVPTLEDGSTDYSKDFFGKPAFLTVSGQLSGETHACAMGDVYTFGPTFRAENSQTARHLAEFWMIEPEMSFADLRDDMDNAEAFVKHVVAHAMEVCGPDLEFFNKFYDKQLLERLQRIKDKPFVR---------------------------------TEHERWLAETRYDTAVFVYDYPRDIKAFYMRDNEDGKTVAAMD 675
T+T+ + V S+ ATH++F+ GF YLQSP+ITASD EGAGEMFRVTTLPS+V+ +P +DG D+S+DFFGK A+LTVSGQLSGE +ACA+GD+YTFGPTFRAENSQT RHLAEF MIEPE++F DL +MDNAE FVK VV A+E CG DL FFN+F DK LLERL ++ D+PF R TEHERWLAET++ TA FVYDYPRDIKAFYMRDN DGKTVAAMD
Sbjct: 9 TNTIAAVARVRSVLAFATHEYFQQLGFHYLQSPLITASDTEGAGEMFRVTTLPSDVAALPKTKDGQIDFSEDFFGKAAYLTVSGQLSGEVYACALGDIYTFGPTFRAENSQTTRHLAEFHMIEPEIAFCDLDQNMDNAEGFVKFVVQRALEKCGDDLSFFNQFIDKGLLERLNKVVDEPFARVSYSEAVALLQEEIAKDPSKWQFPDVEFGTDLQTEHERWLAETKFGTATFVYDYPRDIKAFYMRDNTDGKTVAAMD 266
BLAST of mRNA_H-canaliculatus_F_contig11826.1615.1 vs. uniprot
Match: A0A7S2XZ42_9STRA (Asparagine--tRNA ligase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZ42_9STRA) HSP 1 Score: 321 bits (823), Expect = 3.460e-104 Identity = 159/258 (61.63%), Postives = 187/258 (72.48%), Query Frame = 1
Query: 1 THTVPLLLSVLSLRIQATHDFFRGEGFLYLQSPIITASDCEGAGEMFRVTTLPSEVSKVPTLEDGSTDYSKDFFGKPAFLTVSGQLSGETHACAMGDVYTFGPTFRAENSQTARHLAEFWMIEPEMSFADLRDDMDNAEAFVKHVVAHAMEVCGPDLEFFNKFYDKQLLERLQRIKDKPFVR---------------------------------TEHERWLAETRYDTAVFVYDYPRDIKAFYMRDNEDGKTVAAMD 675
T+T+ + V S Q+TH FF+ +GF YLQSP+ITASDCEGAGEMFRVTTLPS++ +P EDG D++KDFFGKPAFLTVSGQLS ETHACA+GDVYTFGPTFRAENSQTARHLAEF MIEPEM+F +L+++MDNAE +VK+VV H ++ CG DLEFF KFY+K+LL+RL + KPF R TEHERWL E + A FVY+YPRDIKAFYMRDN DGKTVAAMD
Sbjct: 239 TNTIAAVARVRSALAQSTHRFFQDKGFFYLQSPLITASDCEGAGEMFRVTTLPSKIENMPKTEDGELDFTKDFFGKPAFLTVSGQLSAETHACALGDVYTFGPTFRAENSQTARHLAEFNMIEPEMAFTNLQENMDNAEEYVKYVVQHVLDNCGDDLEFFKKFYNKELLDRLDVLVSKPFARVEYTKAIELLVEEIAKDPSQWQFPDVKFGTDLQTEHERWLCEKHFGCATFVYNYPRDIKAFYMRDNADGKTVAAMD 496
BLAST of mRNA_H-canaliculatus_F_contig11826.1615.1 vs. uniprot
Match: A0A835Z2U2_9STRA (Asparagine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2U2_9STRA) HSP 1 Score: 317 bits (811), Expect = 1.840e-103 Identity = 161/258 (62.40%), Postives = 188/258 (72.87%), Query Frame = 1
Query: 1 THTVPLLLSVLSLRIQATHDFFRGEGFLYLQSPIITASDCEGAGEMFRVTTLPSEVSKVPTLEDGSTDYSKDFFGKPAFLTVSGQLSGETHACAMGDVYTFGPTFRAENSQTARHLAEFWMIEPEMSFADLRDDMDNAEAFVKHVVAHAMEVCGPDLEFFNKFYDKQLLERLQRIKDKPFVR---------------------------------TEHERWLAETRYDTAVFVYDYPRDIKAFYMRDNEDGKTVAAMD 675
T+T+ + V S ATH FF+GEGF YLQ+P+ITASDCEGAGEMFRVTTLP + PT + G+ D++KDFFG+PA+LTVSGQLS ETHACA+GDVYTFGPTFRAENSQT RHLAEF MIEPEM+FADL DDMDNAEAFVKHVV+H ++ C DL+FF FYDK L ++LQR+ D+PF R TEHERWLAE +++TA FVY+YPR IKAFYMRDNEDG TVAAMD
Sbjct: 153 TNTIGAVARVRSALAFATHQFFQGEGFQYLQTPLITASDCEGAGEMFRVTTLPP--ASPPTDDAGAVDFAKDFFGRPAYLTVSGQLSAETHACALGDVYTFGPTFRAENSQTTRHLAEFNMIEPEMAFADLIDDMDNAEAFVKHVVSHVLQNCRSDLDFFAGFYDKGLFDKLQRLVDQPFARIEYTAAVKLLQEEIAMDPSQWQFPDVSFGTDLQTEHERWLAEKKFNTATFVYNYPRTIKAFYMRDNEDGATVAAMD 408
BLAST of mRNA_H-canaliculatus_F_contig11826.1615.1 vs. uniprot
Match: A0A7S0DYW5_9EUKA (Asparagine--tRNA ligase n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0DYW5_9EUKA) HSP 1 Score: 311 bits (797), Expect = 3.670e-101 Identity = 156/258 (60.47%), Postives = 184/258 (71.32%), Query Frame = 1
Query: 1 THTVPLLLSVLSLRIQATHDFFRGEGFLYLQSPIITASDCEGAGEMFRVTTLPSEVSKVPTLEDGSTDYSKDFFGKPAFLTVSGQLSGETHACAMGDVYTFGPTFRAENSQTARHLAEFWMIEPEMSFADLRDDMDNAEAFVKHVVAHAMEVCGPDLEFFNKFYDKQLLERLQRIKDKPFVR---------------------------------TEHERWLAETRYDTAVFVYDYPRDIKAFYMRDNEDGKTVAAMD 675
T+++ + V S QATH FF+GEGF Y+Q+P+ITASDCEGAGEMFRVTTLP+E VP D DYS+DFFGKPAFLTVSGQLS ET ACA+GDVYTFGPTFRAE+S T RHLAEFWMIEPEM+FADL+DDMDNAEAFVK VA A+E C DLEFF++FY+K LL++L+ + + PF R TEHERW++E + FVYDYP++IKAFYMRDN DGKTVAAMD
Sbjct: 166 TNSIAAVARVRSTLAQATHQFFQGEGFRYVQTPLITASDCEGAGEMFRVTTLPAEPELVPLTADKKVDYSQDFFGKPAFLTVSGQLSAETMACALGDVYTFGPTFRAEDSNTGRHLAEFWMIEPEMAFADLQDDMDNAEAFVKFAVAQALEHCPDDLEFFDQFYEKGLLDKLKGLLEGPFGRVRYEDAVGMVAAEIAKDPSKWEFPECEFGTDLATEHERWISEVAFGKPTFVYDYPKEIKAFYMRDNPDGKTVAAMD 423
BLAST of mRNA_H-canaliculatus_F_contig11826.1615.1 vs. uniprot
Match: A0A7S2MHU0_9STRA (Asparagine--tRNA ligase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MHU0_9STRA) HSP 1 Score: 310 bits (793), Expect = 3.930e-100 Identity = 156/258 (60.47%), Postives = 186/258 (72.09%), Query Frame = 1
Query: 1 THTVPLLLSVLSLRIQATHDFFRGEGFLYLQSPIITASDCEGAGEMFRVTTLPSEVSKVPTLEDGSTDYSKDFFGKPAFLTVSGQLSGETHACAMGDVYTFGPTFRAENSQTARHLAEFWMIEPEMSFADLRDDMDNAEAFVKHVVAHAMEVCGPDLEFFNKFYDKQLLERLQRIKDKPFVR---------------------------------TEHERWLAETRYDTAVFVYDYPRDIKAFYMRDNEDGKTVAAMD 675
T+T+ + V S+ ATH++F+ GF +LQSP+ITASDCEGAGEMFRVTTLPSEV+K+PT +DG DY +DFFGK A+LTVSGQLS ET+A A+GDVYTFGPTFRAENSQT RHLAEF MIEPE++F DL MDNAE FVK VV+ A+ C DL+FFN+FYDK L+ERLQR+ ++PF R TEHERWL+ET + TA FV+ YPR IKAFYMRDNEDG+TVAAMD
Sbjct: 201 TNTIAAVARVRSVLAFATHEYFQDLGFHFLQSPLITASDCEGAGEMFRVTTLPSEVAKIPTTDDGMVDYKEDFFGKAAYLTVSGQLSAETYASALGDVYTFGPTFRAENSQTTRHLAEFHMIEPEIAFCDLDQSMDNAENFVKFVVSQALAKCRDDLDFFNQFYDKSLIERLQRVVNEPFARVSYREAISLLQTEISKDPSKWSFPDVVFGTDLQTEHERWLSETHFGTATFVHGYPRGIKAFYMRDNEDGETVAAMD 458
BLAST of mRNA_H-canaliculatus_F_contig11826.1615.1 vs. uniprot
Match: A0A7S4D5P5_HETAK (Asparagine--tRNA ligase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D5P5_HETAK) HSP 1 Score: 298 bits (763), Expect = 5.870e-96 Identity = 152/260 (58.46%), Postives = 182/260 (70.00%), Query Frame = 1
Query: 1 THTVPLLLSVLSLRIQATHDFFRGEGFLYLQSPIITASDCEGAGEMFRVTTLPSEVSKVPTLEDGS--TDYSKDFFGKPAFLTVSGQLSGETHACAMGDVYTFGPTFRAENSQTARHLAEFWMIEPEMSFADLRDDMDNAEAFVKHVVAHAMEVCGPDLEFFNKFYDKQLLERLQRIKDKPFVR---------------------------------TEHERWLAETRYDTAVFVYDYPRDIKAFYMRDNEDGKTVAAMD 675
T+T+ + V S ATH+FF+G+GF YLQ+P+ITASDCEGAGEMFRV+TLPS +S++P ED D+ +DFFG AFLTVSGQL+ ET+ACA+GDVYTFGPTFRAENSQT RHLAEF MIEPEM+FADL DDM NAEAFVKHV DL+FF +F+DK L RL+R++D+PF R TEHERWL+E ++ TA FVY+YPR IKAFYMRDNEDG+TVAAMD
Sbjct: 171 TNTIAAVARVRSQLAYATHNFFQGQGFQYLQTPLITASDCEGAGEMFRVSTLPSRISELPRREDDPDRVDFGRDFFGAEAFLTVSGQLNAETYACALGDVYTFGPTFRAENSQTTRHLAEFNMIEPEMAFADLADDMANAEAFVKHVXXXXXXXXXXDLQFFQQFFDKGLTARLERVRDQPFARVEYREAVALLQEEIAKDRSKWQYPDVEFGTDLQTEHERWLSEAKFGTATFVYNYPRGIKAFYMRDNEDGETVAAMD 430
BLAST of mRNA_H-canaliculatus_F_contig11826.1615.1 vs. uniprot
Match: W7TW83_9STRA (Asparagine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TW83_9STRA) HSP 1 Score: 300 bits (768), Expect = 6.520e-96 Identity = 155/260 (59.62%), Postives = 182/260 (70.00%), Query Frame = 1
Query: 1 THTVPLLLSVLSLRIQATHDFFRGEGFLYLQSPIITASDCEGAGEMFRVTTLPSEVSKVPTLE--DGSTDYSKDFFGKPAFLTVSGQLSGETHACAMGDVYTFGPTFRAENSQTARHLAEFWMIEPEMSFADLRDDMDNAEAFVKHVVAHAMEVCGPDLEFFNKFYDKQLLERLQRIKDKPFVR---------------------------------TEHERWLAETRYDTAVFVYDYPRDIKAFYMRDNEDGKTVAAMD 675
T+T+ + V S ATH+FF+ +GF YLQSPIITASDCEGAGEMFRVTTLP +VS++P +E + DYS DFFG PA+LTVSGQLSGE +ACAMGDVYTFGPTFRAENSQT RHLAEF MIEPEM+FADL+D+M NAEA+VK +V H ++ C DL FF KFYDK L+ RL + + F R TEHERWL E ++ A FVY+YPR+IKAFYMRDNEDGKTVAAMD
Sbjct: 239 TNTLAAVARVRSALAFATHNFFQEQGFYYLQSPIITASDCEGAGEMFRVTTLPDKVSELPRVEGEEDRIDYSHDFFGAPAYLTVSGQLSGEAYACAMGDVYTFGPTFRAENSQTTRHLAEFNMIEPEMAFADLQDNMRNAEAYVKAIVRHVLKECEEDLAFFEKFYDKTLMARLNTLVSESFARVEYTEAVRLLQEEIAKDRGAWQFPDVDFGTDLQTEHERWLCEKKFQRATFVYNYPREIKAFYMRDNEDGKTVAAMD 498
BLAST of mRNA_H-canaliculatus_F_contig11826.1615.1 vs. uniprot
Match: B7G8H8_PHATC (Asparagine--tRNA ligase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G8H8_PHATC) HSP 1 Score: 288 bits (737), Expect = 1.240e-92 Identity = 149/267 (55.81%), Postives = 186/267 (69.66%), Query Frame = 1
Query: 1 THTVPLLLSVLSLRIQATHDFFRGEGFLYLQSPIITASDCEGAGEMFRVTTLPSE-VSKVPTL------EDGSTDYSKDFFGKPAFLTVSGQLSGETHACAMGDVYTFGPTFRAENSQTARHLAEFWMIEPEMSFADLRDDMDNAEAFVKHVVAHAMEVCGPDLEFFNKFYDKQLLERLQRIKDKPFVR---------------------------------TEHERWLAETRYDTAVFVYDYPRDIKAFYMRDNED--GKTVAAMD 675
T+T+ + V S A H FF+ +GF+Y+Q+P++TASDCEGAGE+FRVTTL + VS +P E DYS+DFFGKPA+LTVSGQL GETHACA+GD+YTFGPTFRAENSQT+RHLAEF M+EPEM+FADL M+NAE +K+VV H ++ CG DLEFF KFYDK L+ RL+++ KPFVR TEHERWLAET++++AVFVY+YP+ IKAFYMRDNE+ G+TV AMD
Sbjct: 116 TNTIAAVARVRSHLAGAIHAFFQTQGFVYVQTPLVTASDCEGAGELFRVTTLNLDSVSTLPKAKNENGKEQDRVDYSEDFFGKPAYLTVSGQLGGETHACALGDIYTFGPTFRAENSQTSRHLAEFHMVEPEMAFADLTSAMNNAENMLKYVVQHVLDSCGEDLEFFQKFYDKALMTRLEKLVQKPFVRVSYREAIEFLQEEINKDPSKWQFPDVSFGTDLATEHERWLAETKFESAVFVYNYPKAIKAFYMRDNEEDGGETVNAMD 382 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11826.1615.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig11826.1615.1 >prot_H-canaliculatus_F_contig11826.1615.1 ID=prot_H-canaliculatus_F_contig11826.1615.1|Name=mRNA_H-canaliculatus_F_contig11826.1615.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=225bp THTVPLLLSVLSLRIQATHDFFRGEGFLYLQSPIITASDCEGAGEMFRVTback to top mRNA from alignment at H-canaliculatus_F_contig11826:1..3879- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig11826.1615.1 ID=mRNA_H-canaliculatus_F_contig11826.1615.1|Name=mRNA_H-canaliculatus_F_contig11826.1615.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3879bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11826:1..3879- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11826:1..3879- >mRNA_H-canaliculatus_F_contig11826.1615.1 ID=mRNA_H-canaliculatus_F_contig11826.1615.1|Name=mRNA_H-canaliculatus_F_contig11826.1615.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1350bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11826:1..3879- (Hapterophycus canaliculatus Oshoro5f female)back to top |