mRNA_H-canaliculatus_F_contig11811.1606.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig11811.1606.1 vs. uniprot
Match: D7G0N4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0N4_ECTSI) HSP 1 Score: 383 bits (983), Expect = 1.080e-130 Identity = 186/244 (76.23%), Postives = 205/244 (84.02%), Query Frame = 1
Query: 1 RDVFWSQAQAQSREHLGVRQVLDALNRLWKPDAKAPMDLTKSLSFCDRAFVGTPTCSSLMGQKSVVMAGGTGGSQRWLSAHHSQAYREIFEGRWEDWDPFKAGPRMRAAENAACSWGGDQSSASPESIEGGTQGRQAPPQPFRPFQGSISFGRWGEVGNLHVVPMMRVATAFMLLRPFMPDALEAHAAGTDWLCGAGEGPELTLSPKWHQPIMNALVRLPPLSPGDAVFYHTDLIHCEAGAIGR 732
+DVFWSQAQAQ+REH G+RQVL ALNRLW+PDA +P DLTKSLSFCDRAFVG PTCSSL G++SVVMAGGTGGSQRWL+ H QAY +IF+GRWEDWDPFKAGPRMRAAENAACSWG D + + P SI G APPQPFR EVGN+HVVPMMRVATAF LLRPFMPDALEA+A DWLCGAG+GPEL+LSPKWHQP+M+ALVRLPPLSPGDAVFYHTD+IHCEAGAI R
Sbjct: 16 KDVFWSQAQAQAREHDGIRQVLAALNRLWRPDAHSPADLTKSLSFCDRAFVGNPTCSSLKGRESVVMAGGTGGSQRWLNPHLHQAYDDIFQGRWEDWDPFKAGPRMRAAENAACSWGEDDTPSPPGSI-----GVGAPPQPFRXXXXXXXXXXXXEVGNVHVVPMMRVATAFTLLRPFMPDALEANATDGDWLCGAGDGPELSLSPKWHQPLMDALVRLPPLSPGDAVFYHTDIIHCEAGAINR 254
BLAST of mRNA_H-canaliculatus_F_contig11811.1606.1 vs. uniprot
Match: A0A6H5JLR0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLR0_9PHAE) HSP 1 Score: 376 bits (965), Expect = 1.310e-125 Identity = 184/244 (75.41%), Postives = 202/244 (82.79%), Query Frame = 1
Query: 1 RDVFWSQAQAQSREHLGVRQVLDALNRLWKPDAKAPMDLTKSLSFCDRAFVGTPTCSSLMGQKSVVMAGGTGGSQRWLSAHHSQAYREIFEGRWEDWDPFKAGPRMRAAENAACSWGGDQSSASPESIEGGTQGRQAPPQPFRPFQGSISFGRWGEVGNLHVVPMMRVATAFMLLRPFMPDALEAHAAGTDWLCGAGEGPELTLSPKWHQPIMNALVRLPPLSPGDAVFYHTDLIHCEAGAIGR 732
+DVFWSQAQAQ+REH GVRQVL ALNRLW+PDA +P DLTKSLSFCDRAFVG PTCSSL G++S VMAGGTGGSQRWL+ H QAY +IF+GRWEDWDPFKAGPRMRAAEN+ACSWG D + + P SI G APPQPFR VGN+HVVPMMRVATAF LLRPFM DALEA+A DWLCGAG+GPEL+LSPKWHQPIM+ALVRLPPLSPGDAVFYHTD+IHCEAGAI R
Sbjct: 189 KDVFWSQAQAQAREHDGVRQVLAALNRLWRPDAHSPADLTKSLSFCDRAFVGNPTCSSLKGRESAVMAGGTGGSQRWLNPHLHQAYGDIFQGRWEDWDPFKAGPRMRAAENSACSWGEDDTPSPPGSI-----GIGAPPQPFRXXXXXXXXXXXXXVGNVHVVPMMRVATAFTLLRPFMADALEANATDGDWLCGAGDGPELSLSPKWHQPIMDALVRLPPLSPGDAVFYHTDIIHCEAGAINR 427
BLAST of mRNA_H-canaliculatus_F_contig11811.1606.1 vs. uniprot
Match: A0A835YIE9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIE9_9STRA) HSP 1 Score: 126 bits (317), Expect = 8.970e-31 Identity = 86/259 (33.20%), Postives = 121/259 (46.72%), Query Frame = 1
Query: 10 FWSQAQAQSREHLGVRQVLDALNRLWKPDAKA----PMDLTKSLSFCDRAFVGTPTCSSLMGQKS------------------VVMAGGTGGSQRWLSAHHSQAYREIFEGRWEDWDPFKAGPRMRAAENAACSWGGDQSSASPESIEGGTQGRQAPPQPFRPFQGSISFGRW-GEVGNLHVVPMMRVATAFMLLRPFMPDALEAHAAGTDWLCGAGEGPELTLSPKWHQPIMNALVRLPPLSPGDAVFYHTDLIHCEA 717
+WS Q +RE+ + VL AL LW + +DL +L++CDR +G P CS +S A G+ + WL + YR + EGRWE+WDPF AGPR + + SW + G FRP+QG +S W + GNL +VP++R A A+ LL+PF DA A G + G L L+ + H P++ ALV LPPLS GD V +H D+ E+
Sbjct: 42 YWSHPQLMARENPRIATVLTALTALWHTEGSTVGVPAVDLQTNLTYCDRLCIGKP-CSPHGDFRSRGGGXXXXXXXXXXXXXXXXAAMGSPAREHWLHPRFTGVYRPVIEGRWEEWDPFHAGPRAALDQALSGSW-----------TKHGA---------FRPWQGFLSLAPWLQQEGNLRLVPLLRAAMAYALLQPFTADAPPAADTGESSVSGMHG---LRLNERDHAPLLRALVTLPPLSAGDLVLWHPDIAIAES 276
BLAST of mRNA_H-canaliculatus_F_contig11811.1606.1 vs. uniprot
Match: A0A1R0GPY8_9FUNG (Uncharacterized protein n=1 Tax=Smittium mucronatum TaxID=133383 RepID=A0A1R0GPY8_9FUNG) HSP 1 Score: 118 bits (296), Expect = 2.040e-27 Identity = 70/237 (29.54%), Postives = 123/237 (51.90%), Query Frame = 1
Query: 4 DVFWSQAQAQSREHLGVRQVLDALNRLWKPDAKAPMDLTKSLSFCDRAFVGTPTCSSLMGQKSVVMAGGTGGSQRWLSAHHSQAYREIFEGRWEDWDPFKAGPRMRAAENAACSWGGDQSSASPESIEGGTQGRQAPPQPFRPFQG--SISFGRWGEVGNLHVVPMMRVATAFMLLRPFMPDALEAHAAGTDWLCGAGEGPELTLSPKWHQPIMNALVRLPPLSPGDAVFYHTDLIH 708
+++WS+AQ ++R H Q ALNRLW D +DL +L++CDR + P S ++ + G ++RW ++ + + I EG+WED DP+ R+ A + GG + FR +QG ++S + G G+L + P+++ TA +L+RP MPD L++ + + GA G ++ + P+ +++ V +P ++PGDAVF+H D++H
Sbjct: 132 ELYWSKAQVEARSHPHFLQTATALNRLWHADENDEVDLETNLAYCDRVRIRKPKDHSFKLREHL----DGGSTERWEDENYRKCFSNILEGKWEDHDPYDVTHRLDAKMQLHDAPGGCEM--------------------FRTYQGWLALSSAKSG-CGSLQLCPLIKETTAAILMRPLMPDLLDSSS-----MAGAFPGTQIDIDPELLPQVVDTTVCIPDMNPGDAVFWHCDMVH 338
BLAST of mRNA_H-canaliculatus_F_contig11811.1606.1 vs. uniprot
Match: A0A2T9XWP4_9FUNG (Uncharacterized protein n=2 Tax=Smittium megazygosporum TaxID=133381 RepID=A0A2T9XWP4_9FUNG) HSP 1 Score: 114 bits (285), Expect = 7.340e-26 Identity = 73/237 (30.80%), Postives = 120/237 (50.63%), Query Frame = 1
Query: 4 DVFWSQAQAQSREHLGVRQVLDALNRLWKPDAKAPMDLTKSLSFCDRAFVGTPTCSSLMGQKSVVMAGGTGGSQRWLSAHHSQAYREIFEGRWEDWDPFKAGPRMRAAENAACSWGGDQSSASPESIEGGTQGRQAPPQPFRPFQG--SISFGRWGEVGNLHVVPMMRVATAFMLLRPFMPDALEAHAAGTDWLCGAGEGPELTLSPKWHQPIMNALVRLPPLSPGDAVFYHTDLIH 708
+++WS+AQ ++R H Q ALNRLW D A +DL +L++CDR + P SS ++ + G ++RW + + Y +I G+WE+ D F A R+ A + GG + FR FQG ++S + G G+L + P+++ TA +++RP + D + + G GA G ++ + PK I + V +P +SPGDAVF+H D++H
Sbjct: 132 ELYWSKAQVEARSHPNFIQTAAALNRLWHADENAKVDLGTNLTYCDRLRIRKPGDSSFKLREHL----DGGSTERWEDECYRKCYSDILNGQWENHDAFDATHRLDAKMQMYDAPGGCEM--------------------FRTFQGWLALSSVKSG-CGSLRLCPLIKETTAAIIMRPLLQDIIHTSSMG-----GAYPGTQIDIDPKLLSQITSICVPIPDVSPGDAVFWHCDMVH 338
BLAST of mRNA_H-canaliculatus_F_contig11811.1606.1 vs. uniprot
Match: A0A367JR36_RHIST (Uncharacterized protein n=1 Tax=Rhizopus stolonifer TaxID=4846 RepID=A0A367JR36_RHIST) HSP 1 Score: 112 bits (281), Expect = 2.990e-25 Identity = 76/237 (32.07%), Postives = 118/237 (49.79%), Query Frame = 1
Query: 4 DVFWSQAQAQSREHLGVRQVLDALNRLWKPDAKAPMDLTKSLSFCDRAFVGTPTCSSLMGQKSVVMAGGTGGSQRWLSAHHSQAYREIFEGRWEDWDPFKAGPRMRAAENAACSWGGDQSSASPESIEGGTQGRQAPPQPFRPFQG--SISFGRWGEVGNLHVVPMMRVATAFMLLRPFMPDALEAHAAGTDWLCGAGEGPELTLSPKWHQPIMNALVRLPPLSPGDAVFYHTDLIH 708
+++WS++Q +R H G + ALN LW +DLTK+L +CDR + P S Q+ V +G +RW + Q Y +IF G WE +DPF A R+ A + S GG + FR FQG +IS + G G L V P+++ ATA L++P + ++ D++ GA G + + + I++ +V +P + PGDAVF+H DL+H
Sbjct: 140 ELYWSKSQVAARSHAGFEKATLALNTLWHASEHTAIDLTKNLGYCDRLRIRKPGDSLFALQEHV----DSGSLERWQDPEYRQCYTDIFHGEWEKYDPFDATRRVEARMDYYNSPGGCSA--------------------FRNFQGWVAISDIKTGS-GTLRVCPLLKEATALFLMKPLTENYIDK----LDYV-GAYPGLAQGIDKQDYPQIVDNMVSMPDVKPGDAVFWHCDLVH 346
BLAST of mRNA_H-canaliculatus_F_contig11811.1606.1 vs. uniprot
Match: A0A1D2MPX7_ORCCI (Uncharacterized protein n=1 Tax=Orchesella cincta TaxID=48709 RepID=A0A1D2MPX7_ORCCI) HSP 1 Score: 110 bits (276), Expect = 1.540e-24 Identity = 69/238 (28.99%), Postives = 120/238 (50.42%), Query Frame = 1
Query: 4 DVFWSQAQAQSREHLGVRQVLDALNRLWKPDAKAPMDLTKSLSFCDRAFVGTPTCSSLMGQKSVVMAGGTGGS-QRWLSAHHSQAYREIFEGRWEDWDPFKAGPRMRAAENAA-CSWGGDQSSASPESIEGGTQGRQAPPQPFRPFQGSISFGR-WGEVGNLHVVPMMRVATAFMLLRPFMPDALEAHAAGTDWLCGAGEGPELTLSPKWHQPIMNALVRLPPLSPGDAVFYHTDLIH 708
+++WS++Q +R H A+N LW + +D + + ++CDR + P +S + + GGS +RW + ++ I G WE +DP+ A R+ A + CS G FR FQG +S + G L V P+++++TA+++LRP + D +E T + GA +G + + P++HQP+++A+V +P ++PGD VF+H D IH
Sbjct: 142 ELYWSKSQVAARSHPNFVAAQTAMNSLWHAAPETLIDFSINTTYCDRLRIRKPGDTSFALAEHI-----DGGSVERWEDPEYRNCFKSILSGEWEKYDPYDATHRVNAIMDLYNCSGGCSM---------------------FRSFQGWLSLSTVFPGGGTLRVCPIIKLSTAYLILRPLLEDLVE-----TTNMAGAKQGVQQHILPEFHQPLIDAVVSIPQVNPGDCVFWHCDGIH 348
BLAST of mRNA_H-canaliculatus_F_contig11811.1606.1 vs. uniprot
Match: A0A7S1AL14_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1AL14_NOCSC) HSP 1 Score: 110 bits (275), Expect = 2.330e-24 Identity = 80/254 (31.50%), Postives = 118/254 (46.46%), Query Frame = 1
Query: 4 DVFWSQAQAQSREHLGVRQVLDALNRLWKP----DAKAPMDLTKSLSFCDRAFVGTPTCSSLMGQKSVVMAGGTGGS-QRWLSAHHSQAYREIFEGRWEDWDPFKAGPRMRAAEN------AACSWGGDQSSASPESIEGGTQGRQAPPQPFRPFQGSISFGRWGEV-GNLHVVPMMRVATAFMLLRPFMPDALEAHAAGTDWLCGAGEGPELTLSPKWHQPIMNALVRLPPLSPGDAVFYHTDLIHCEAGAIG 729
+V+WS+ Q + R + V Q ALNRLW D + P+D+ + L++ +R + +S + GGS +RW + + Y +I G WE++D + A R A + CS FR FQG +S R G G L VVP++R TAF++LRPF+ D E+ CGA G L PK+H ++ LV +P + PGD V++H DLIH G+ G
Sbjct: 141 EVYWSKPQGEMRMNPAVLQTQTALNRLWHCRAGYDGQVPVDVHRPLTYGERLRIRAAGDTSFTLGPHI-----DGGSVERWEDDEYRRVYEKILTGEWENYDAWDATHRAEARCDLYRLGVGLCSI-------------------------FRSFQGWLSLSRSGHGRGALMVVPLVRETTAFLMLRPFLDDVPESS------FCGANPGKTQDLLPKFHAAVIEGLVPIPDVGPGDTVWWHCDLIHAVEGSNG 358
BLAST of mRNA_H-canaliculatus_F_contig11811.1606.1 vs. uniprot
Match: A0A226EL10_FOLCA (Uncharacterized protein YbiU n=1 Tax=Folsomia candida TaxID=158441 RepID=A0A226EL10_FOLCA) HSP 1 Score: 110 bits (274), Expect = 2.820e-24 Identity = 71/243 (29.22%), Postives = 119/243 (48.97%), Query Frame = 1
Query: 4 DVFWSQAQAQSREHLGVRQVLDALNRLWKPDAKAPMDLTKSLSFCDRAFVGTPTCSSLMGQKSVVMAGGTGGS-QRWLSAHHSQAYREIFEGRWEDWDPFKAGPRMRAAENAA-CSWGGDQSSASPESIEGGTQGRQAPPQPFRPFQG--SISFGRWGEVGNLHVVPMMRVATAFMLLRPFMPDALEAHAAGTDWLCGAGEGPELTLSPKWHQPIMNALVRLPPLSPGDAVFYHTDLIHCEAG 720
+++WS+AQ +R H A+N LW + A +D + ++++CDR + +S + + GGS +RW + + + +I G WED DPF A R+ A + CS G FR FQG S+S + GE G L V P+++++TA+ ++RP + D +++ + GA G + + P H I+N +V +P + PGD VF+H D++H G
Sbjct: 141 ELYWSKAQVAARSHQNFLLATKAVNNLWHAEPTAAIDFSYNVAYCDRLRIRQKGDTSFTLNEHI-----DGGSVERWEDPEYRKCFDKILSGEWEDHDPFDASHRISANMDLYNCSGGCSM---------------------FRTFQGFLSLSTVKPGE-GTLRVCPLIKLSTAYFIMRPLLDDLIDSKE-----MAGAIPGAQQHILPSLHPHIVNNVVSIPEVGPGDCVFWHCDMVHAVEG 351
BLAST of mRNA_H-canaliculatus_F_contig11811.1606.1 vs. uniprot
Match: A0A2T9XXW3_9FUNG (Uncharacterized protein n=3 Tax=Harpellales TaxID=61421 RepID=A0A2T9XXW3_9FUNG) HSP 1 Score: 108 bits (269), Expect = 1.320e-23 Identity = 68/237 (28.69%), Postives = 114/237 (48.10%), Query Frame = 1
Query: 4 DVFWSQAQAQSREHLGVRQVLDALNRLWKPDAKAPMDLTKSLSFCDRAFVGTPTCSSLMGQKSVVMAGGTGGS-QRWLSAHHSQAYREIFEGRWEDWDPFKAGPRMRAAENAACSWGGDQSSASPESIEGGTQGRQAPPQPFRPFQGSISFGRWGE-VGNLHVVPMMRVATAFMLLRPFMPDALEAHAAGTDWLCGAGEGPELTLSPKWHQPIMNALVRLPPLSPGDAVFYHTDLIH 708
+++WS+AQ ++R H Q ALN+LW + +DL +L++CDR + P S + ++ + GGS +RW + + + + I G WE D + R+ A + GG + FR FQG ++ G+L V P+++ TA +++RP + D LE + G GA G ++ + P + + V +P +SPGDAVF+H DL+H
Sbjct: 135 ELYWSKAQVEARSHPHFVQTTTALNKLWNAQEDSLVDLETNLTYCDRLRIRKPNDESFVLREHI-----DGGSVERWEDSSYRKCFSNILAGEWEKHDSYDVANRLDAKMQLYDAPGGCEM--------------------FRTFQGWLALSNSNSGCGSLRVCPLVKETTAAIIMRPLLQDILETSSMG-----GAYPGTQIDIDPVMLPQVTDICVSIPDVSPGDAVFWHCDLVH 341 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11811.1606.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig11811.1606.1 >prot_H-canaliculatus_F_contig11811.1606.1 ID=prot_H-canaliculatus_F_contig11811.1606.1|Name=mRNA_H-canaliculatus_F_contig11811.1606.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=244bp RDVFWSQAQAQSREHLGVRQVLDALNRLWKPDAKAPMDLTKSLSFCDRAFback to top mRNA from alignment at H-canaliculatus_F_contig11811:335..3249+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig11811.1606.1 ID=mRNA_H-canaliculatus_F_contig11811.1606.1|Name=mRNA_H-canaliculatus_F_contig11811.1606.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2915bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11811:335..3249+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11811:335..3249+ >mRNA_H-canaliculatus_F_contig11811.1606.1 ID=mRNA_H-canaliculatus_F_contig11811.1606.1|Name=mRNA_H-canaliculatus_F_contig11811.1606.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1464bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11811:335..3249+ (Hapterophycus canaliculatus Oshoro5f female)back to top |