mRNA_H-canaliculatus_F_contig118.1589.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig118.1589.1 vs. uniprot
Match: D7FHX5_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHX5_ECTSI) HSP 1 Score: 390 bits (1001), Expect = 2.900e-120 Identity = 314/835 (37.60%), Postives = 397/835 (47.54%), Query Frame = 2
Query: 203 MHAAAGAGAVESIELLLSAGLSPKARDQHGRTPLHLAA---AQGSAQCVAFLCIVARSTVVSRDKVTGDTPLHSAVRSRHGVCIEVILLHAQGPVNIMREPNAKGETPLDVAATLDDDNAFLWALEDGDRRWRERSSDRDGATLSLGSGDHVGGQELARRKDG--IDFERIMAVWEKFFENAAVAYGWWDGDRPKGSAVIVEDEIGR--HRGV---------RSTRRREDSGWWDMNDQPRTSRM--REKQSDVQPATSGRGSRKDVVLKEGGAGDG---------RIHSCRNN--PQHVQ--ASPTTPRFCAWTSRPLDLVHDRESDDRDAAHTRQ-HVPQQPKEHLRVRLGSEQHEASTLSPHDADLHLFHTPREDSDGETSWGLEPNQAKVFSSLEPPILEREAIADPLDTAIDVSSPYICQEAWVACWDASSESIYYWNSESGEATWDGQSCATSCGE-EAQQGFPNRVWDPQQEAFFAVDERGVSHWLMKS----TCPTASVEGQEEGNGAAG--------------TSI----TPFNGRDSG-----------------------------------------------------------------GEK--------NDDFRSFYDSKEQDCRHDHACS-PQARAEKAYLFESTD--AACGGHGAAIFSSEQPPKQPSCTEATAPTFVA----NKKNTGRGASPNSDDFFDTEE---CRRDE-------SLAVVEGGTLL-DDGLDSTQTNPAFYQLSAWVMWCAISR----DEDAPPYFVNEETCSSSWVLPPKAVVASGGWLRAWSEEHQAPFFANQWTGRVTWHL 2257
MH AAG GAVESIELLLSAGLSP+ RD GRTPLH A G+A+CV+FLC+VA STV+SRD+ GDTPLH AVR+RHGVC+EV+L A+G +I+RE NAKGETPLD+AA L D+ + AL DGDRR + S +G LS L R +G +DF+RIMAVWE+FFENAA A G + + +GR + GV R + + G W QPR ++ R++ G G + G DG R R P + +S T + A + P L D E + D A + H Q KE L V++G + + LS DADLHLFHTPR E E + S+LEP + + A D +PY AW+ACWDA+SESIYYW+S SGE +W+ + +T+ E GFP+ VWDPQ+EAFF +D+ G SHWL+ S T T VE + +GA G TS T F+ G G++ NDD F+D++E+ A S QA A + E D A G + S E+ Q C A A V+ N G+G P+ +D FDTEE RD L VEGGT D+ + +PA +L WV WC+ S D + PYFVNEET SSWVLPP AV S GWLRAWSEEHQA FFANQWTG VTW L
Sbjct: 1 MHTAAGVGAVESIELLLSAGLSPRTRDHSGRTPLHHACLFPGSGAARCVSFLCVVAGSTVLSRDRTAGDTPLHFAVRARHGVCVEVLLSFAEGTSDILREANAKGETPLDLAAALSGDDGIVLALLDGDRRRHQPRS--NGGKLSY----------LGRNVEGGTVDFQRIMAVWERFFENAARAD--LGGKKSSPDVISAVGTVGRGGYGGVEQLVNTDETRGVGKLAEDGRWLGRGQPRATQTFDRDRHFVTTSELGGGGVGESQTGDRNGRWDGGWCVDTADSRTFRSRRTWRPSGLADTSSIATAQDLARGTPPQHLERDGEDEHVDVAPLQSPHRRQGAKEDLGVQVGVGESGTTLLSSDDADLHLFHTPRGGDGVEAVRLPERIHGNIDSTLEPSTPASKDTNAAAEAAAD--NPYRRHGAWIACWDAASESIYYWDSNSGELSWNAPAPSTAIERGERLNGFPSPVWDPQREAFFTIDKDGASHWLVDSPSSPTWTTPVVEHRAATDGADGDIASLVVQDYTYDRTSASEESTTFSSWQQGLAIGAAAPEWSSSEVERDRDRDALNNTVNQVDEVLAWDGQQLLAGLPYSFPMLDRQAVQQLPNTCGDEYSKDDINGNDDLHGFFDAQEEHATRRSAPSFSQAGAGQECAVEPIDGDARADGRVLHLASGEE---QQRCLRANAAAVVSESTQNTTTAGKGNQPDGNDVFDTEEQPSYLRDSHQDTDQNGLGAVEGGTRSHDESAVAEAYDPALTRLPLWVQWCSYSPHDGDDTNNQPYFVNEETGESSWVLPPDAVAESRGWLRAWSEEHQAHFFANQWTGNVTWDL 816
BLAST of mRNA_H-canaliculatus_F_contig118.1589.1 vs. uniprot
Match: A0A6H5KHS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHS3_9PHAE) HSP 1 Score: 384 bits (987), Expect = 5.350e-118 Identity = 318/862 (36.89%), Postives = 397/862 (46.06%), Query Frame = 2
Query: 104 LDCMELLLQGITTNSARRKKNMNGQLKRRGCFPMHAAAGAGAVESIELLLSAGLSPKARDQHGRTPLHLAA---AQGSAQCVAFLCIVARSTVVSRDKVTGDTPLHSAVRSRHGVCIEVILLHAQGPVNIMREPNAKGETPLDVAATLDDDNAFLWALEDGDRRWRERSSDRDGATLSLGSGDHVGGQELARRKDG--IDFERIMAVWEKFFENAAVAYGWWDGDRPKGSAVIVE--DEIGR--HRGV---------RSTRRREDSGWWDMNDQPRTSRMREKQSDVQPATS----GRGSRKDVVLKEGGAGDGR----IHSCRNNPQHVQASPTTPRFCAWTSRPLDLVHDRESDDRDAAHTRQHVP---QQPKEHLRVRLGSEQHEASTLSPHDADLHLFHTPREDSDGETSWGLEPNQAKVFSSLEPPILEREAIADPLDTAIDVSSPYICQEAWVACWDASSESIYYWNSESGEATWD--GQSCATSCGEEAQQGFPNRVWDPQQEAFFAVDERGVSHWLM----KSTCPTASVEGQEEGNGAAG--------------------TSITPFN-------------------GRDSG-------------------------------------------GEK--------NDDFRSFYDSKEQDC-RHDHACSPQARAEKAYLFESTDAACGGHGAAIFSSEQPPKQPSCTEATAPTFVA----NKKNTGRGASPNSDDFFDTEE---CRRDE-------SLAVVEGGTLLDDGLDSTQTNP-AFYQLSAWVMWCAISRDEDAPP---YFVNEETCSSSWVLPPKAVVASGGWLRAWSEEHQAPFFANQWTGRVTWHL 2257
L + L I + R +N QLKRRG FPMH AAG GAVESIELLLSAGLSP+ RD GRTPLH A +A+CV+FLC VA STV+SRD+ GDTPLH AVR+R GVC+EV+L A G +I+RE NA GETPLD+AA L D+ L AL + D R R+ S +G LS L R +G +DF+RIMAVWE+FFENAA A D R K S ++ +GR + GV R+ + G W QPR ++ ++ D+ T+ G G + G DG RN +S T R A P L D E D A P Q K+ L V++G + + LS DADLHLFHTPR E E + S+LEP +A + A D +PY W+ACWDA+SES+YYW+S SGE +W+ G S A G G P+ +WDPQ+EAFF +DE G SHWL+ T T VE + +GA G T+ T + RD G GEK NDD F+D++E+ R S A A + E D G + + P +Q C A A V+ N G+G + D DT+E RD L VEGGT D + + A +L WV WC+ S +D YFVNEET SSWVLPP AV S GWL AWSEEHQA FFANQWTG VTW L
Sbjct: 4 LQALSLFAADILAHVLPRCVQLNKQLKRRGYFPMHTAAGVGAVESIELLLSAGLSPRTRDHSGRTPLHHACLFPGSAAARCVSFLCAVAGSTVLSRDRTAGDTPLHFAVRARQGVCVEVLLSFAAGTNDILREANANGETPLDLAAALSGDDVILLALLEADGRRRQPRS--NGGNLSY----------LGRNVEGDTVDFQRIMAVWERFFENAARA----DLGRKKSSPDVISAVGTVGRGEYGGVEQLVNTDETRAAGKLAKDGRWLGRGQPRATQTLDR--DISFVTTSELGGGGGGESQSGDRNGRWDGGWCVDTADSRNLRSRSTSSVATARDLARGPPPQHLERDGEDAHVDVAPLLPVGPMRRQGVKDDLSVQVGVGESGTTLLSSDDADLHLFHTPRGGDGVEAVRLPERIHGNIDSTLEPSTPPIKATNAAAEAAAD--NPYRRHGTWIACWDAASESVYYWDSNSGELSWNAPGPSTAIERGNRLN-GIPSPLWDPQREAFFTIDEDGASHWLVGYPSSPTWTTPVVEHRAAMDGADGDTASLVQEYNPDRTTVSKESTTYTSWQQGSAVAAAAPEPSSSEVECDRDRGILGTTANQVEEDPAWDRQQPLAGFSHSLRMVDRQSIQTLPNTCGEKYTEDDVNGNDDLHEFFDAQEEHAARCSTPSSSHAGAGQECAVEPIDGDAGADNRVVHLASGPEQQ-RCLRANAAAVVSEYTQNTTTAGKGNQSDGIDLSDTDEQPSSGRDSHQDTDQNGLGAVEGGTRFHDESSVVEADDLAMIRLPLWVQWCSYSPHDDDDTNLSYFVNEETGESSWVLPPDAVAESRGWLLAWSEEHQAHFFANQWTGNVTWDL 843
BLAST of mRNA_H-canaliculatus_F_contig118.1589.1 vs. uniprot
Match: A0A068YCS0_ECHMU (BRCT and ankyrin repeats domain containing protein n=3 Tax=Echinococcus TaxID=6209 RepID=A0A068YCS0_ECHMU) HSP 1 Score: 63.5 bits (153), Expect = 1.280e-6 Identity = 44/119 (36.97%), Postives = 60/119 (50.42%), Query Frame = 2
Query: 176 QLKRRGCFPMHAAAGAGAVESIELLLSAGLSPKARDQHGRTPLHLAAAQGSAQCVAFLCIVARSTVVSRDKVTGDTPLHSAVRSRHGVCIEVILLHAQGPVNIMREPNAKGETPLDVAA 532
+L +G +H AA V ++ LL+AGLSP ARD G TPLH AA +G A+ V L +TV +T LH AV +R + ++L H P N +G TPL + A
Sbjct: 302 RLNSKGESVLHRAAIKNNVSELKRLLTAGLSPNARDHAGWTPLHEAALRGHAEAVECLLTDGHATVDIPGGPDLETALHEAVFNRQVEIVRLLLRHNANPTFA----NGQGVTPLQMCA 416
BLAST of mRNA_H-canaliculatus_F_contig118.1589.1 vs. uniprot
Match: A0A0R3X3W2_HYDTA (RING-type domain-containing protein n=1 Tax=Hydatigena taeniaeformis TaxID=6205 RepID=A0A0R3X3W2_HYDTA) HSP 1 Score: 60.1 bits (144), Expect = 1.500e-5 Identity = 41/119 (34.45%), Postives = 59/119 (49.58%), Query Frame = 2
Query: 176 QLKRRGCFPMHAAAGAGAVESIELLLSAGLSPKARDQHGRTPLHLAAAQGSAQCVAFLCIVARSTVVSRDKVTGDTPLHSAVRSRHGVCIEVILLHAQGPVNIMREPNAKGETPLDVAA 532
+L +G +H AA V ++ LL+AGLSP ARD G TPLH AA +G A+ V L +T+ +T LH AV + + ++L + P N +G TPL + A
Sbjct: 293 KLNSKGESALHRAAIKNNVSELKRLLTAGLSPDARDHAGWTPLHEAALRGHAEAVECLLTDGHATIDMPGGPDLETALHEAVCNHQVEIVRLLLRYNANPTFA----NGQGVTPLQICA 407
BLAST of mRNA_H-canaliculatus_F_contig118.1589.1 vs. uniprot
Match: A0A024UKE6_9STRA (Glutaminase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UKE6_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 5.100e-5 Identity = 47/158 (29.75%), Postives = 77/158 (48.73%), Query Frame = 2
Query: 101 HLDCMELLLQ-GITTNSARRKKNMNGQLKRRGCF----PMHAAAGAGAVESIELLLSAGLSPKA-RDQHGRTPLHLAAAQGSAQCVAFLCIVARSTVVSRDKVTGDTPLHSAVRSRHGVCIEVILLHAQGPVNIMREP---NAKGETPLDVAATLDDD 547
HL +LL + G+ TNS + K + +R + AA +G ++S+++ +GL+ A RD GRTPLH+AAA+G V FL AR ++ +D+ +TP+ A R H +E + Q P + + +TP + DD+
Sbjct: 521 HLHVAQLLTKAGVITNSTKHAKTSSRFKAKRPVLLQDMSVFYAAYSGDLQSLKVSFGSGLNFAALRDYDGRTPLHVAAAEGRLDVVKFLISTARVPILVKDR-NRNTPISEAKRGGHAAVLEFMRKQLQTPATESKRHFPVHTVPQTPRHIEENSDDE 677
BLAST of mRNA_H-canaliculatus_F_contig118.1589.1 vs. uniprot
Match: A0A672SZC1_SINGR (Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B-like n=2 Tax=Sinocyclocheilus grahami TaxID=75366 RepID=A0A672SZC1_SINGR) HSP 1 Score: 58.2 bits (139), Expect = 6.370e-5 Identity = 43/115 (37.39%), Postives = 63/115 (54.78%), Query Frame = 2
Query: 188 RGCFPMHAAAGAGAVESIELLLSAGLSPKARDQHGRTPLHLAAAQGSAQCVAFLCIVARSTVVSRDKVTGDTPLHSAVRSRHGVCIEVILLHAQGPVNIMREPNAKGETPLDVAA 532
+G P+HAAA AG V+ ++LLL+ S DQ GR+ L +AA +G + V L VA + D+ G+T LH A +R C +IL + P + + NA +TPL +AA
Sbjct: 784 KGRTPLHAAAFAGNVDCVQLLLAHNASVDEVDQSGRSALIMAAEKGRVEVVEALLTVANVNLNLTDQ-KGNTALHLACSNRMEECALLIL--GKLPDSALIATNAALQTPLHLAA 895 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig118.1589.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig118.1589.1 >prot_H-canaliculatus_F_contig118.1589.1 ID=prot_H-canaliculatus_F_contig118.1589.1|Name=mRNA_H-canaliculatus_F_contig118.1589.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=747bp MSYNIHIYTHASDYGVLGALLIEASGREHLDCMELLLQGITTNSARRKKNback to top mRNA from alignment at H-canaliculatus_F_contig118:40814..43965- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig118.1589.1 ID=mRNA_H-canaliculatus_F_contig118.1589.1|Name=mRNA_H-canaliculatus_F_contig118.1589.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3152bp|location=Sequence derived from alignment at H-canaliculatus_F_contig118:40814..43965- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig118:40814..43965- >mRNA_H-canaliculatus_F_contig118.1589.1 ID=mRNA_H-canaliculatus_F_contig118.1589.1|Name=mRNA_H-canaliculatus_F_contig118.1589.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=4482bp|location=Sequence derived from alignment at H-canaliculatus_F_contig118:40814..43965- (Hapterophycus canaliculatus Oshoro5f female)back to top |