mRNA_H-canaliculatus_F_contig1168.1484.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1168.1484.1
Unique NamemRNA_H-canaliculatus_F_contig1168.1484.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig1168.1484.1 vs. uniprot
Match: D7FLT3_ECTSI (tRNA(His) guanylyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLT3_ECTSI)

HSP 1 Score: 532 bits (1371), Expect = 4.570e-180
Identity = 296/425 (69.65%), Postives = 327/425 (76.94%), Query Frame = 3
Query:  810 MANSRFQYVKKFELSDALLPDTYLIARLDGHRFTKFTADHGFSKPNDERGLALMAECARQVMSEWSDLVMAFGQSDEFSFLLPASSPLYGRRSAKLSTSFVSLFSSSFVFFWSKHFPDTPLLYPPNFDARIVSYPSAQHVRDYFAWRQADCHINNLYNSCFWALVADGVSKQDAQVALKGTTSGDKNELLFSRFNTNYNEIPQRFRKGTTLFRARPTAAGAP------SSEASQQSQEQGGEGANLGGQRTG-GRSVDAENVTSRGDAGEEKSTGPQASDAANMEAPAPAAVER--------GRATVSPA----DVKPGSHVEAEKANRGQVSEGVASVAGKDQASAAPAKDCGKGKVATKTGTASGNNAIVRVVSCGAGKGRSKRLLKKGHAPPGAIEEEACDLIRDDFWDRNPHILAGGVTRR 2027
            MANSRFQYVKKFELSDALLPDTYL+ARLDGHRFTKFTA+HGF+KPNDERGL LMAECARQVMSEWSDLVMAFGQSDEFSFLLPASSPLYGRRSAKLSTSFVSLFSSSFVFFW KHFPDTPLLYPPNFDARIVSYPSAQHVRDYF+WRQADCHINNLYN+CFWALVADGVSKQDAQVALKGTTSGDKNELLFSRF+TNYNEIPQRFRKGTTLFRARPTA  A        +   Q S++ G    +  G + G G  V++  +++    GE  + G QA +   +EAP  AA E         G  T+  +    D KP +  E   A  G  + G A+  GK Q    P +  GKG  + K G A   +A+V+VVSC  GKGR+KRLLKKGHAPPGAIEE+ACDLIRDDFWDRNPHILA G  RR
Sbjct:    1 MANSRFQYVKKFELSDALLPDTYLVARLDGHRFTKFTAEHGFTKPNDERGLLLMAECARQVMSEWSDLVMAFGQSDEFSFLLPASSPLYGRRSAKLSTSFVSLFSSSFVFFWPKHFPDTPLLYPPNFDARIVSYPSAQHVRDYFSWRQADCHINNLYNTCFWALVADGVSKQDAQVALKGTTSGDKNELLFSRFDTNYNEIPQRFRKGTTLFRARPTAVAAXXXXXXXETPLRQPSRQDGAAAVDGSGDKGGRGPPVESGPISATATGGETPTAGRQAGET-GVEAPRLAAQETNNRVENNIGVETIPDSRPSEDGKPEAGSEGGDAQAGVAASGAAT--GKGQGDKRP-RGRGKGGASEKAGGAPRGDAVVKVVSCSDGKGRAKRLLKKGHAPPGAIEEDACDLIRDDFWDRNPHILAAGTMRR 421          
BLAST of mRNA_H-canaliculatus_F_contig1168.1484.1 vs. uniprot
Match: A0A6H5KZK5_9PHAE (tRNA(His) guanylyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZK5_9PHAE)

HSP 1 Score: 477 bits (1227), Expect = 9.750e-157
Identity = 296/538 (55.02%), Postives = 320/538 (59.48%), Query Frame = 3
Query:  810 MANSRFQYVKKFELSDALLPDTYLIARLDGHRFTKFTADHGFSKPNDERGLALMAE-----------------------CARQVMSEWSDLVMAFGQSDEFSFLLPASSPLYGRRSAKLSTSFVSLFSSSFVFFWSKHFPDTPLLYPPNFDARIVSYPSAQ------------------------------------------------------------------------------------------HVRDYFAWRQADCHINNLYNSCFWALVADGVSKQDAQVALKGTTSGDKNELLFSRFNTNYNEIPQRFRKGTTLFRARPTAAGAPSSEAS-----QQSQEQGGEGANLGGQRTGGRSVDAEN--VTSRGDAGEEKSTGPQASDAANMEAPAPAAVER--------GRATVSPA----DVKPGSHVEAEKANRGQVSEGVASVAGKDQASAAPAKDCGKGKVATKTGTASGNNAIVRVVSCGAGKGRSKRLLKKGHAPPGAIEEEACDLIRDDFWDRNPHILAGGVTRR 2027
            MANSRFQYVKKFELSDALLPDTYL+ARLDGHRFTKFTA+HGF+KPNDERGL LM E                       CARQVMSEWSDLVMAFGQSDEFSFLLPASSPLYGRRSAKLSTSFVSLFSSSFVFFW KHFPDTPLLYPPNFDARI+SYPSAQ                                                                                          HVRDYF+WRQADCHINNLYN+CFWALVADGVSKQDAQVALKGTTSGDKNELLFSRF+TNYNEIPQRFRKGTTLFRARPTA  AP          +Q   Q G  A  G    GGR    E   V++    GE    G QA +   +EAP  AA E         G  T+  +    D KP +  E   A  G  + G A+  GK  +   P    GKG  + K G     +A+V+VVSC  GKGR+KRLLKKGHAPPGAIEE+ACDLIRDDFWDRNPHILA G  RR
Sbjct:    1 MANSRFQYVKKFELSDALLPDTYLVARLDGHRFTKFTAEHGFTKPNDERGLLLMTEPTRMRAIDLRTFGPLLVAFVSVQCARQVMSEWSDLVMAFGQSDEFSFLLPASSPLYGRRSAKLSTSFVSLFSSSFVFFWPKHFPDTPLLYPPNFDARIISYPSAQASTPVVMLRVFLWHNHYFPLPLVHSGFKGVDGVINDKVLGVKVALRRLEADERSVNPSRAEGDLRAKDIVVDDTIDALKTTVDEEKGAAEHVRDYFSWRQADCHINNLYNTCFWALVADGVSKQDAQVALKGTTSGDKNELLFSRFDTNYNEIPQRFRKGTTLFRARPTAVAAPXXXXXXXXXXRQPSRQDGAAAVDGSGDKGGRGPPVEGGPVSATATGGETPMAGQQAGET-GVEAPTLAAQETNNRVENNIGVETIPDSRRSGDGKPEAGTEGGDAQAGVAASGAAT--GKGLSDKGP-HGRGKGGASEKAGGTPRGDAVVKVVSCSDGKGRAKRLLKKGHAPPGAIEEDACDLIRDDFWDRNPHILAAGTMRR 534          
BLAST of mRNA_H-canaliculatus_F_contig1168.1484.1 vs. uniprot
Match: W4K9K2_HETIT (tRNA(His) guanylyltransferase n=1 Tax=Heterobasidion irregulare (strain TC 32-1) TaxID=747525 RepID=W4K9K2_HETIT)

HSP 1 Score: 275 bits (703), Expect = 1.240e-81
Identity = 132/214 (61.68%), Postives = 164/214 (76.64%), Query Frame = 3
Query:  810 MANSRFQYVKKFELSDALLPDTYLIARLDGHRFTKFTADHGFSKPNDERGLALMAECARQVMSEWSDLVMAFGQSDEFSFLLPASSPLYGRRSAKLSTSFVSLFSSSFVFFWSKHFPDTPLLYPPNFDARIVSYPSAQHVRDYFAWRQADCHINNLYNSCFWALVADG-VSKQDAQVALKGTTSGDKNELLFSRFNTNYNEIPQRFRKGTTLFR 1448
            MA SRF+YVK FEL D LLPDTY++ R+DGH F +F+A+H F KPNDER L LM   AR VM E+ D+V+AFG+SDE+SFLL  S+ LY RR AK+ ++  SLF++++V  W  HFPD PL Y P FDARIV YPSA+ VRDYFAWRQAD HINNLYN+ FWALV  G +S ++A  +L+GT SG K+E+LFSRFN NYN +P RFRKG+ + R
Sbjct:    1 MAESRFEYVKGFELPDPLLPDTYMLMRVDGHSFHRFSAEHNFEKPNDERALRLMDRAARAVMDEYPDVVLAFGESDEYSFLLRKSAALYNRRHAKILSTLTSLFTAAYVMHWPAHFPDEPLRYAPAFDARIVLYPSARAVRDYFAWRQADTHINNLYNTTFWALVQQGGLSTKEAHESLRGTVSGQKHEILFSRFNVNYNALPARFRKGSVMVR 214          
BLAST of mRNA_H-canaliculatus_F_contig1168.1484.1 vs. uniprot
Match: A0A0C2X7D8_9AGAM (tRNA(His) guanylyltransferase n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C2X7D8_9AGAM)

HSP 1 Score: 271 bits (692), Expect = 3.830e-81
Identity = 124/214 (57.94%), Postives = 166/214 (77.57%), Query Frame = 3
Query:  810 MANSRFQYVKKFELSDALLPDTYLIARLDGHRFTKFTADHGFSKPNDERGLALMAECARQVMSEWSDLVMAFGQSDEFSFLLPASSPLYGRRSAKLSTSFVSLFSSSFVFFWSKHFPDTPLLYPPNFDARIVSYPSAQHVRDYFAWRQADCHINNLYNSCFWALVADG-VSKQDAQVALKGTTSGDKNELLFSRFNTNYNEIPQRFRKGTTLFR 1448
            MANS++ YV+ FEL D+++P T++I RLDGH F +F+ADHGF KPNDER L LM   A+QVM  + ++ MAFG+SDE+SFLL  +  LY RRS+K++++F SLF++++ F W++ FP+TPL YPP+FD R+V+YPS++ + DYFAWRQAD HINNLYN+ FWALV  G +S  +A  ALKGT S  K E+LFSRF  NYN +P RFRKG+ L+R
Sbjct:    1 MANSKYAYVRSFELPDSIMPSTFMIVRLDGHAFHRFSADHGFEKPNDERALRLMDAAAKQVMKAYPEVAMAFGESDEYSFLLRKTCNLYNRRSSKIASTFASLFAATYTFSWAEFFPETPLQYPPSFDGRVVAYPSSKEIIDYFAWRQADTHINNLYNTTFWALVLQGNMSTSEAHNALKGTISSQKQEILFSRFQINYNTLPDRFRKGSVLYR 214          
BLAST of mRNA_H-canaliculatus_F_contig1168.1484.1 vs. uniprot
Match: F5H8X8_CRYNB (tRNA(His) guanylyltransferase n=11 Tax=Cryptococcus TaxID=5206 RepID=F5H8X8_CRYNB)

HSP 1 Score: 271 bits (693), Expect = 4.050e-81
Identity = 126/214 (58.88%), Postives = 167/214 (78.04%), Query Frame = 3
Query:  810 MANSRFQYVKKFELSDALLPDTYLIARLDGHRFTKFTADHGFSKPNDERGLALMAECARQVMSEWSDLVMAFGQSDEFSFLLPASSPLYGRRSAKLSTSFVSLFSSSFVFFWSKHFPDTPLLYPPNFDARIVSYPSAQHVRDYFAWRQADCHINNLYNSCFWALVADGVSKQDAQVALKGTTSGDKNELLFSRFNTNYNEIPQRFRKGTTLFRA 1451
            MA SRF+YVKKFEL D L+P+TY+I R+DG  F KF+  H F KPND R L LM   A+ V++E+ D+VMAFG+SDE+SFLL  ++ LY RR +K+++S VSLF+S++VF W+  FP+TPLLYPP+FDAR+V YP+ + VRDYF+WRQAD HINNLYN+ FWALV DG++  +A  AL+GT S DKNE+LF++F  NYN +P+ FRKG+   R+
Sbjct:    1 MAKSRFEYVKKFELPDPLVPNTYIIVRIDGKGFHKFSDVHSFDKPNDIRALKLMNTAAKAVLNEYKDVVMAFGESDEYSFLLRRTTTLYNRRRSKINSSIVSLFTSAYVFHWASFFPNTPLLYPPSFDARVVLYPNVKEVRDYFSWRQADTHINNLYNTTFWALVHDGLTTAEANKALQGTNSKDKNEILFTKFGINYNTLPEMFRKGSVCVRS 214          
BLAST of mRNA_H-canaliculatus_F_contig1168.1484.1 vs. uniprot
Match: A0A550CIN6_9AGAR (tRNA(His) guanylyltransferase n=1 Tax=Auriculariopsis ampla TaxID=97359 RepID=A0A550CIN6_9AGAR)

HSP 1 Score: 270 bits (691), Expect = 6.730e-81
Identity = 129/224 (57.59%), Postives = 167/224 (74.55%), Query Frame = 3
Query:  810 MANSRFQYVKKFELSDALLPDTYLIARLDGHRFTKFTADHGFSKPNDERGLALMAECARQVMSEWSDLVMAFGQSDEFSFLLPASSPLYGRRSAKLSTSFVSLFSSSFVFFWSKHFPDTPLLYPPNFDARIVSYPSAQHVRDYFAWRQADCHINNLYNSCFWALVADG-VSKQDAQVALKGTTSGDKNELLFSRFNTNYNEIPQRFRKGTTLFR--ARPTAAGA 1472
            MA S+F YV+ FEL D LLPDTY++ RLDGH F +F+  HGF KPND+R L LM + A ++M E+ D+V+AFG+SDE+SFLL  S+ LY RR  K+ T+  S F+SS+VF W K+FPDTPL YPP+FD RIV YP  QH+RDYF+WRQAD HINNLYN+ FWALV  G ++  DA   L+GT S  K+E+LF+RF  NYNE+ +R+RKG+ + R   RPT++ A
Sbjct:    1 MAGSKFSYVRNFELPDPLLPDTYIVFRLDGHSFHRFSDVHGFVKPNDKRALELMDQAALKLMEEYRDIVLAFGESDEYSFLLRRSASLYNRRETKIVTTLTSFFTSSYVFMWHKYFPDTPLQYPPSFDGRIVLYPREQHIRDYFSWRQADTHINNLYNTVFWALVQQGGLTTTDAHGTLRGTVSKQKHEILFTRFQINYNEVDERYRKGSVIVREEVRPTSSRA 224          
BLAST of mRNA_H-canaliculatus_F_contig1168.1484.1 vs. uniprot
Match: A0A5M3MYM2_CONPW (tRNA(His) guanylyltransferase n=1 Tax=Coniophora puteana (strain RWD-64-598) TaxID=741705 RepID=A0A5M3MYM2_CONPW)

HSP 1 Score: 269 bits (688), Expect = 8.080e-81
Identity = 128/214 (59.81%), Postives = 159/214 (74.30%), Query Frame = 3
Query:  810 MANSRFQYVKKFELSDALLPDTYLIARLDGHRFTKFTADHGFSKPNDERGLALMAECARQVMSEWSDLVMAFGQSDEFSFLLPASSPLYGRRSAKLSTSFVSLFSSSFVFFWSKHFPDTPLLYPPNFDARIVSYPSAQHVRDYFAWRQADCHINNLYNSCFWALVADG-VSKQDAQVALKGTTSGDKNELLFSRFNTNYNEIPQRFRKGTTLFR 1448
            MA S++ YV+ FEL D LLP T+L+ RLDGH F +F+ +HGFSKPNDER L +M   A+ VM E+ D++++FG+SDEFSFLL  S+ LY RR AK+ T+  S F+S +VF W KHFPDTPL YPP+FD RIV YPSA+ VRDYFAWRQ D HINNLYN+ FWALV  G  S   A   LKGT S  K+E+LFSRF  NYN +P++F+KG+ L R
Sbjct:    1 MAGSKYAYVRNFELPDPLLPGTFLVCRLDGHSFHRFSDEHGFSKPNDERALRVMDAAAQSVMEEYKDILLSFGESDEFSFLLRKSTQLYNRRHAKILTTLTSYFTSCYVFHWPKHFPDTPLRYPPSFDGRIVQYPSAREVRDYFAWRQVDTHINNLYNTTFWALVQQGGQSTTQAHATLKGTFSKQKHEILFSRFGINYNALPEQFKKGSVLVR 214          
BLAST of mRNA_H-canaliculatus_F_contig1168.1484.1 vs. uniprot
Match: A0A0H2S0G8_9AGAM (tRNA(His) guanylyltransferase n=1 Tax=Schizopora paradoxa TaxID=27342 RepID=A0A0H2S0G8_9AGAM)

HSP 1 Score: 270 bits (690), Expect = 8.810e-81
Identity = 126/215 (58.60%), Postives = 161/215 (74.88%), Query Frame = 3
Query:  810 MANSRFQYVKKFELSDALLPDTYLIARLDGHRFTKFTADHGFSKPNDERGLALMAECARQVMSEWSDLVMAFGQSDEFSFLLPASSPLYGRRSAKLSTSFVSLFSSSFVFFWSKHFPDTPLLYPPNFDARIVSYPSAQHVRDYFAWRQADCHINNLYNSCFWALVADG-VSKQDAQVALKGTTSGDKNELLFSRFNTNYNEIPQRFRKGTTLFRA 1451
            MA +++ YVK FEL D LLP T+++AR+DGH F +FT  H F+KPNDERGL LM   AR VM EW D+V+ FG+SDE+SFL    + LY RR AK+ TS VS F++S++F WS++FP+TPL YPP FDAR++ YPS Q VRDYF+WRQAD HINNLYN+ FWALV  G  + + A  +L+GT S  KNE LFSRF  NY+++ +RFRKG+ L RA
Sbjct:    1 MAGTKYAYVKSFELPDTLLPGTFIVARVDGHSFHRFTEVHNFAKPNDERGLRLMDHAARDVMDEWKDIVLCFGESDEYSFLFRRKTELYNRRQAKILTSLVSKFTASYIFHWSEYFPETPLNYPPTFDARLILYPSVQEVRDYFSWRQADTHINNLYNTAFWALVEQGGQTTKKAHESLRGTNSSQKNETLFSRFGINYSKLSERFRKGSILVRA 215          
BLAST of mRNA_H-canaliculatus_F_contig1168.1484.1 vs. uniprot
Match: A0A0J0XTP7_9TREE (tRNA(His) guanylyltransferase n=1 Tax=Cutaneotrichosporon oleaginosum TaxID=879819 RepID=A0A0J0XTP7_9TREE)

HSP 1 Score: 273 bits (697), Expect = 1.510e-80
Identity = 126/231 (54.55%), Postives = 170/231 (73.59%), Query Frame = 3
Query:  786 TACAASPTMANSRFQYVKKFELSDALLPDTYLIARLDGHRFTKFTADHGFSKPNDERGLALMAECARQVMSEWSDLVMAFGQSDEFSFLLPASSPLYGRRSAKLSTSFVSLFSSSFVFFWSKHFPDTPLLYPPNFDARIVSYPSAQHVRDYFAWRQADCHINNLYNSCFWALVADGVSKQDAQVALKGTTSGDKNELLFSRFNTNYNEIPQRFRKGTTLFRARPTAAGAPS 1478
            T     PTMANS+++YVK +EL D L+P+T+ + R+DGH FTKF   H F KPND R L LM   A+ VM E+ D+V+AFG+SDE+SFL+   + +YGRR +K++++  S+F+S++VF+WS+ FP+TPL YPP FD+R+V YPSA+ VRDYF+WRQ D HINNL+N+C+WAL  DGVS  +A   L+GT S +KNELLFSRF  NYN +P+ F+KG+ L R  P     PS
Sbjct:   45 TLTTTPPTMANSQYEYVKSYELPDPLMPNTFAVIRVDGHAFTKFCHAHEFEKPNDIRALDLMNRAAKAVMQEFPDIVLAFGESDEYSFLMRRDASVYGRRRSKINSTVASVFTSNYVFYWSEFFPNTPLKYPPTFDSRVVLYPSAKEVRDYFSWRQVDTHINNLHNTCYWALRHDGVSGTEATKLLEGTFSDNKNELLFSRFKVNYNNLPEYFKKGSVLVRTDPRLTKGPS 275          
BLAST of mRNA_H-canaliculatus_F_contig1168.1484.1 vs. uniprot
Match: A0A8H4B4K0_GIGMA (tRNA(His) guanylyltransferase n=1 Tax=Gigaspora margarita TaxID=4874 RepID=A0A8H4B4K0_GIGMA)

HSP 1 Score: 267 bits (682), Expect = 3.550e-80
Identity = 117/213 (54.93%), Postives = 166/213 (77.93%), Query Frame = 3
Query:  810 MANSRFQYVKKFELSDALLPDTYLIARLDGHRFTKFTADHGFSKPNDERGLALMAECARQVMSEWSDLVMAFGQSDEFSFLLPASSPLYGRRSAKLSTSFVSLFSSSFVFFWSKHFPDTPLLYPPNFDARIVSYPSAQHVRDYFAWRQADCHINNLYNSCFWALVADGVSKQDAQVALKGTTSGDKNELLFSRFNTNYNEIPQRFRKGTTLFR 1448
            MA S+++YVKKFE +D+LLP+T+L+ R+DG  F KF+  HGF KPND++ L LM +CA  VM+++ D+V+A+GQSDE+SF+L     LY RR  K+ ++ VSLF+S++VF W+K+FPD  LLYPP+FD R+V YP   ++RDY +WRQ DCHINNLYN+CFWALV  G ++ +A+  L+GT S +KNELL+S+FN NYN++P+ +RKG+ + R
Sbjct:    1 MAKSKYEYVKKFERNDSLLPNTWLVIRVDGRGFHKFSDKHGFVKPNDQKALELMNKCAENVMNDFRDIVLAYGQSDEYSFVLKKECSLYDRRETKIVSTIVSLFTSNYVFNWNKYFPDKELLYPPSFDGRVVQYPDDNNLRDYLSWRQTDCHINNLYNTCFWALVHSGKTETEAENVLRGTVSSEKNELLYSQFNINYNKLPEMYRKGSVIIR 213          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1168.1484.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLT3_ECTSI4.570e-18069.65tRNA(His) guanylyltransferase n=1 Tax=Ectocarpus s... [more]
A0A6H5KZK5_9PHAE9.750e-15755.02tRNA(His) guanylyltransferase n=1 Tax=Ectocarpus s... [more]
W4K9K2_HETIT1.240e-8161.68tRNA(His) guanylyltransferase n=1 Tax=Heterobasidi... [more]
A0A0C2X7D8_9AGAM3.830e-8157.94tRNA(His) guanylyltransferase n=1 Tax=Serendipita ... [more]
F5H8X8_CRYNB4.050e-8158.88tRNA(His) guanylyltransferase n=11 Tax=Cryptococcu... [more]
A0A550CIN6_9AGAR6.730e-8157.59tRNA(His) guanylyltransferase n=1 Tax=Auriculariop... [more]
A0A5M3MYM2_CONPW8.080e-8159.81tRNA(His) guanylyltransferase n=1 Tax=Coniophora p... [more]
A0A0H2S0G8_9AGAM8.810e-8158.60tRNA(His) guanylyltransferase n=1 Tax=Schizopora p... [more]
A0A0J0XTP7_9TREE1.510e-8054.55tRNA(His) guanylyltransferase n=1 Tax=Cutaneotrich... [more]
A0A8H4B4K0_GIGMA3.550e-8054.93tRNA(His) guanylyltransferase n=1 Tax=Gigaspora ma... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1168contigH-canaliculatus_F_contig1168:338..10902 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score543.1
Seed ortholog evalue1.3e-151
Seed eggNOG ortholog2880.D7FLT3
Preferred nameTHG1
KEGG koko:K10761
GOsGO:0000966,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008192,GO:0008193,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070568,GO:0071704,GO:0090304,GO:0099116,GO:1901360
EggNOG free text desc.tRNAHis guanylyltransferase
EggNOG OGsCOG4021@1,KOG2721@2759
EC2.7.7.79
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03016
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptiontRNAHis guanylyltransferase Thg1
Ec32 orthologEc-26_001350.1
Exons6
Model size2473
Cds size1437
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1168.1484.1prot_H-canaliculatus_F_contig1168.1484.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1168 781..10293 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928859.9919643-UTR-H-canaliculatus_F_contig1168:337..7801622928859.9919643-UTR-H-canaliculatus_F_contig1168:337..780Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1168 338..780 -
1696845592.2204206-UTR-H-canaliculatus_F_contig1168:337..7801696845592.2204206-UTR-H-canaliculatus_F_contig1168:337..780Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1168 338..780 -
1622928860.0979078-UTR-H-canaliculatus_F_contig1168:10293..103791622928860.0979078-UTR-H-canaliculatus_F_contig1168:10293..10379Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1168 10294..10379 -
1696845592.276819-UTR-H-canaliculatus_F_contig1168:10293..103791696845592.276819-UTR-H-canaliculatus_F_contig1168:10293..10379Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1168 10294..10379 -
1622928860.1151114-UTR-H-canaliculatus_F_contig1168:10395..109021622928860.1151114-UTR-H-canaliculatus_F_contig1168:10395..10902Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1168 10396..10902 -
1696845592.2858374-UTR-H-canaliculatus_F_contig1168:10395..109021696845592.2858374-UTR-H-canaliculatus_F_contig1168:10395..10902Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1168 10396..10902 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928860.0108604-CDS-H-canaliculatus_F_contig1168:780..14991622928860.0108604-CDS-H-canaliculatus_F_contig1168:780..1499Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1168 781..1499 -
1696845592.231203-CDS-H-canaliculatus_F_contig1168:780..14991696845592.231203-CDS-H-canaliculatus_F_contig1168:780..1499Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1168 781..1499 -
1622928860.0270827-CDS-H-canaliculatus_F_contig1168:1957..20451622928860.0270827-CDS-H-canaliculatus_F_contig1168:1957..2045Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1168 1958..2045 -
1696845592.2413363-CDS-H-canaliculatus_F_contig1168:1957..20451696845592.2413363-CDS-H-canaliculatus_F_contig1168:1957..2045Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1168 1958..2045 -
1622928860.0487533-CDS-H-canaliculatus_F_contig1168:2506..26001622928860.0487533-CDS-H-canaliculatus_F_contig1168:2506..2600Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1168 2507..2600 -
1696845592.2518415-CDS-H-canaliculatus_F_contig1168:2506..26001696845592.2518415-CDS-H-canaliculatus_F_contig1168:2506..2600Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1168 2507..2600 -
1622928860.06601-CDS-H-canaliculatus_F_contig1168:3245..33971622928860.06601-CDS-H-canaliculatus_F_contig1168:3245..3397Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1168 3246..3397 -
1696845592.2600043-CDS-H-canaliculatus_F_contig1168:3245..33971696845592.2600043-CDS-H-canaliculatus_F_contig1168:3245..3397Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1168 3246..3397 -
1622928860.0842113-CDS-H-canaliculatus_F_contig1168:9909..102931622928860.0842113-CDS-H-canaliculatus_F_contig1168:9909..10293Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1168 9910..10293 -
1696845592.268055-CDS-H-canaliculatus_F_contig1168:9909..102931696845592.268055-CDS-H-canaliculatus_F_contig1168:9909..10293Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1168 9910..10293 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1168.1484.1

>prot_H-canaliculatus_F_contig1168.1484.1 ID=prot_H-canaliculatus_F_contig1168.1484.1|Name=mRNA_H-canaliculatus_F_contig1168.1484.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=479bp
MIVRQQHHLGYIPAITFTNRHSNSGIHCVSSLGQGVVNARRIQTLAKVDF
GRTDSSSRQQLFDSTACAASPTMANSRFQYVKKFELSDALLPDTYLIARL
DGHRFTKFTADHGFSKPNDERGLALMAECARQVMSEWSDLVMAFGQSDEF
SFLLPASSPLYGRRSAKLSTSFVSLFSSSFVFFWSKHFPDTPLLYPPNFD
ARIVSYPSAQHVRDYFAWRQADCHINNLYNSCFWALVADGVSKQDAQVAL
KGTTSGDKNELLFSRFNTNYNEIPQRFRKGTTLFRARPTAAGAPSSEASQ
QSQEQGGEGANLGGQRTGGRSVDAENVTSRGDAGEEKSTGPQASDAANME
APAPAAVERGRATVSPADVKPGSHVEAEKANRGQVSEGVASVAGKDQASA
APAKDCGKGKVATKTGTASGNNAIVRVVSCGAGKGRSKRLLKKGHAPPGA
IEEEACDLIRDDFWDRNPHILAGGVTRR*
back to top

mRNA from alignment at H-canaliculatus_F_contig1168:338..10902-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1168.1484.1 ID=mRNA_H-canaliculatus_F_contig1168.1484.1|Name=mRNA_H-canaliculatus_F_contig1168.1484.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=10565bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1168:338..10902- (Hapterophycus canaliculatus Oshoro5f female)
CCCACAAAGCACGAGCGTTTGCACAAGGTGAGTGGCGAAACGAGCCAGCA GGGGTGGCGGAGGGAGGCGACCTCCACCAGGCAAAAGAAAAAAACGTCAC GAGATGTGCCCGAAAGAGAACAACCAAATTAAGAACGCAGGCGACGAGGA GCACAATCCGGTCCGTCTTGCAGCACAAGACTGCACGAAGCCTGCAATGG GAGTGACTTCCAACCCTTCTGGACGCCACCGCGACCTGTTTTGGATGATG CCCTCGAAAGAAATGGGCCGGGAAAAACAAAAAAGAAAAAAAAAAAGCGA GTTCGGAGTTCGTGAAAAAATCACGAATTTCAAACGCGGCCTCGGCCTCG TCGGGAACTACGGCTGCATCGAATGGACCTCTCACACGCGGATAGTACTC ACAGACTCCACCTCGCGGGACACATCCCTTTTCGATATGGACATGAAATC ACAGCGCACTGGGTGCGTGGGGGCTCAATCGCGACAAAGAAGTCAGCCCC GCATCCCTGGTAAATTTTAATGCCTTCGATTTAAAAGCCAAAGGTTACGC CGCATCTCCGCATCTCCTCTCCGGGCCACCACACGCAACCGGCCGCCGAC CGAAGACACATGATAGTGAGGCAGCAGCATCACCTTGGCTACATACCTGC CATTACCTTCACGAACCGCCACAGCAACAGCGGAATTCATTGTGTTTCCA GTCTCGGACAGGGCGTGGTAAACGCCCGGCGTATCCAGACCCTCGCGAAG GTTGACTTCGGACGCACAGATTCTTCTTCGCGGCAACAGCTCTTCGACTC TACCGCTTGCGCTGCATCGCCTACCATGGCCAACAGCAGATTCCAGTACG TGAAGAAGTTCGAGCTGTCCGACGCACTACTGCCAGACACATACCTGATT GCCAGGCTGGATGGCCATAGATTTACCAAGTTTACGGCAGATCACGGGTT CAGCAAGCCCAATGATGAGCGAGGGCTGGCGCTCATGGCTGAGGTAAGCG ACAGCACCGCAGTGCTGTACAAAAAGGAGCTGTCTGGCAACGACGCCTTC AGCAGTAAAGTTCATGTCTCAAACGCATCGTTTCATCTTGACATTCACCT ACTAGGCAAGGATCTCTGCAAGCGTGCATGGTTCAGATACAAACATTGCG GGTAGAGCAGCAAAAGTACGTCGAGAGTTTGTGCTAAGTTGGCCTGAGTC CACAGCAGTGGCGGCGGGAAGACTACTTCCGGACAGCAGAGGTTGAGGTT GTTACGTTGTTACGTGTACAACCTGGTGTTTCGGTAGAACGACAAGAAAG ATGCAAGTAGACAGGAAGACTCTGGAAATCGAAGGACAAGGCTGCTTGCG ATGGGAATGATCCGGAGGCAGTAAAAGAGAGCGAGATATCTATATATACC TGGTATGTCTTCGTCCAAAACCAACAGAGCCTTTGTGGGGAGACGGACAC ACACGAGGGAACGAGGCTGTTTAAAGGCAAGGGAAGCGGAAAAAAAGAGG CGAGGAACAGAGGGTCGATATCCCACTCATGTAGTGGCACAAGTTGTCCC TCTCCTGTGGACATGACAACGAGTTTGAGATGCACGTGCGGGCGAAGAGG AGGAAGATAGAGATTAATTTATCGCAACACCGAAATGAAGAAGGGGAGCG GAGCGGGCGCCGCGAGCACGACGCAGCCTTCGAGCTGCTGGAGGCCGCCG GGGGAGGGATAGCGTGACGGATACACAACAGAAACAAAAGCGATGGGGCG GAAGGGACGAGGAACGCTAGGCAGGATTGATAGCGAAGAGAAGCGAGTTC AGATTTTAAGACTGCCAGGGAAGTCGGAAGGAGCGGAACCCGTAGAACCG TGCAGAGGGGCACCTATTGCGCGCCCAGGCAGCGAGACGGAGGAGACGAA CGGGCAAGAGAGGCGGGCGAAGCCAATCAGCAATTTCAAAACACACTCAG CTGCCCCTCTCGCGGAGTTTCCCTGGGAAAAGACGGGCGAATGGAGCGCC GCTTAAAGATGCAAAGGGGGCGACGGAAACGGGGTGGTTTCAGACAGTAG CAAGACTGACAGCCCAGCAGCAATAGCAGCAATACTGCGCTGTATGGATA GGAAGGTACGGGCGGGCTGGAGAGGATACGGAGGCAGATAGGGAAGCTAG GGCTAGGACCGCGACAGCAGCAGCAGTAGCCGGCCTCAGATCCAGGATCA TAGACAGGAATGATGTTTGTGAAATTTCTGGCGACAGTAGCGCGGGATGT GTTGGCACAATTTTGGTGCACGCCCTCGCCACCCTGCCCACAATCCTTAC AAGCAGGCAGCCCCCTCCTCCCCTGTAAGCAACCAAACTTCAAGTCGAAC ACCTCTGAAGTGAGTGGCTCTTTTTCTATATGTACTTGCCACCCGTCACC TGTCAACGACTACGAGTATGGAGATGCCAGAAAGAGTGCCACCTGGCGTG TTGGTCGAGGTCGGGGTAAAGGTACAGGAGAAACAGGCAAAAGACAGCGT CGTGGCACCTGCTTCCACACCGCAGTTTAAGGCGGGACGGAAGAGAGCCA GGGCAGCGAGAGGTATGGTTCCCGAGACCGGAGACTGCATAGATCATGCA GCACCAAAGTCGCGGGAGAGCTGGAGATCACCGCCGTGCGCGAGCAAAGA CAGGGTACGGATTGCATTCGCGATGTTCCACGAGATGAACACACTAGTAC CGACCGCGAAAGTCGGACTACTCATGACTTGTGGGTCAGAGGGAAACCTA GATCCAGAGTTGTAGTACAGGGACCGTCCTAGTGCGCAATTATTTGAAGG AGCAGCCTAGAATATGGCTGTTCACATGGTGGTGGCACGGCAAAGCTCTT GCTTTTCTGCCGGCTGAAGCAACACATATCCCGGGGTGCAAAAGCTAGCT GGCCGGGGCGGTGGAAGAAAGAGGCGCCAAGCAACGAGTGATATACGGTC GTTACTCAATTCCAGCGCACAACGGGTGAACCGGAGGGGCTGGGGGCTCG CAAACGCGACGACGTACTTCGACCAAGTTTTCACGTGCGAGACGGCGATG TGATGACGGAGACTCTGACCAGTTTGTTGGAATTGCTTTTGTATGCGTTG ATTGTGAGTTTGATCCGGAAGATAAACGCTAAGGATGGCCTTTCGACAGT TACTGGCTGGTCGAGCAGGGACCCCGGTCTTCTTACGCCTATGATAGGAG TACATTTCCAAGTCGCGGGTGTACGTGTACGGTTCTGGTGGACAGGATAC CCCGGCGTGGATCTTGACTCGGTGCTTCGGCGATAGAGTACGTACACAGG AAAACATCGAAGATTCGGTGGGATGTATGACGTCGGGAATCAAGAACAAG GAGCATGAAAAACGGCTGCGGCAATAGCCGAACAGATACTGCAGGTGGCA CCGGAATACAGGGTGGAGAAGGCGGACGGGGGTAGGGGGTGGCGGAGGAC GCGCGTTTGTTTCTTCTGTGTGTGTGGATGACATAGTAACCATGTAAAGG CGCACTGCGAGGATGGCGGGGGGAGGCGTCTACGTAGCGCAGACGAGAGC GCTTGCGCACCCGTATAAACACGCCACGTGCAGTTCGGGGGAAAGAACAC GAAGAAAAGGTTCTGGCTAGGAAAAATCAGGCTTGGAGACAGTACAAGGA TTGCTAGGACGGATGGTGTACACCGAAGACAAGACCATAGCGTTCACGAA ACAGAGGGTCCGTAACCTCACAAACGACATTGGAGCTGCCGCCTGTAAGC AGGAGGACGACCACAGAAGGAGTTCTGGTGTTGGCCGGGAAACCACACCT CCAGGCCTTCGTCATCGAACCTGAGCAGGACTTTGTACGCCGACTCCTGC AGTTGACGAGATTCAATCTGAACGGGGCCGAAAGGGCCGGGCGGGGGGCG GGTGTTGCAAGCGCAGAAGGCACAAGCGAATAGAGTACATTTGTACGCTC GCTCCCTTTCGAGAGAGCTCCATAGCGGACATATGTAGGGTGGCACATCT AACATAACGTGGAGAGTACATTTGTACGCTCGCTCCCTTTCGAGAGAGCT CCATAGCGGACATATGTAGGGTGGCACATCTAACATAACGTGGAAGTAGC AGGGTAGGCAGGAAGGAAGCACGGTAAGAAGAGCGTCGTTCAGCCTCACG AAGCAAAACGGATGGTTTGGTTTTCGGATTCGGCAACAAGGGTGATCGAG GAAACTCGCGTGAAAACCAGAGTGTGGTGGAGGTGTTTGCGATGGAGCCC AAGGCAAAGCAAGGGTTTGGAAAGATCTGCGAGAGACGACGCACTTGGCA GGATTGTGTCCCCGACCAGATAGACTTGCACTGGAGCGGGGACACCTGGT TCATGGAGAGCATTCGGTAACAAGAGTCTGTGGATGAACAAGCAGGTAGG CGAGGGGGGAGCGGTGGAGTAGTTGGCAGACTTCGGTCACAAATAATCGA CAATAAGCAGGATGCTGGTGGCAACAATCTCTTTTACCAGTTGACAACGA CTCAACGAGCTGAGGAACCCGCACATCAAGGGCGCAGCACAAGGAGTAAA GAAGAAACATGAGAGGAACGTGACCGAAGTATGAATAATAAGGCTGATGA CATAAGCGGAACATTGTAGGTGGTCCAGCAAAGGTTGGGGAACTGGAGGG AGGAGGTTGAGGGGCTGTCGACGGGGTTTGCACTGTGATACTTTCAATTT TGCTGAGAGCATGAAAATCAGCTGTCTTAACGAACGAAAGCCACCACAAA GAAAAGTGCGTAGTCTGTGCAGGAACGACGAGGTCCTCTTCGACAAGGAT GTGCAACAACAACGGTTGAACAGGAGGCCAGGGGACAAGATGGAAGAACA CAAAAGAGGTTCAAGAGGAGACCAAGGAAGGAAGTGGACAATCCTGGCTA CGAAAAGAGACGAAATTGAAGGGGCAGTCGAACTTACGTCGGAGTCGCGC GACCTGAACGAATTAAGGGGGCCGGGGGTACAGATGTGGGAAAGGTGGAA AGGTTTGGCAAAGGGAAGGCATCCAAACTATCTCAGAGAAGGAACAACAA AAGTTGCGGATGCTTGGACAAGGCAAGGGATAGGTTAGGGGCATGCATGA AACCGGAATAGTTTCCCCCGCATTCGGGAAGGACAGGGGGAGACAAGACT CGACTCTCAAGGAGTACCGTGCAAAATTGTGAAGGACAAGGGTAGATGGT AATCGCTTTCGATCTTGGCATACGTCAGAGCCAATGTGCGAGATCCATTT CTGGTGTCGGCAGTGGTAAAGGACGGGGCAGGGTAATTTGAGAGGCAACC TGGGCAACAGACAAATCGGAACTATTAATACTCCAAGTAGAAATCAGATA GAATAAGAAATTCGCAGAGCAAAGCCTGGTCTCGGCATATGGATCTTGAC ATCCCAGCTTCGTTGGCACGATTGATGTGGGTCAAGCAGGTTTTCTGTCC TAGAAAACCGGGGCACACCAGTTCGTCTAGGGCCCTGGAAAGGGGGAAAG CTCTAGCGTGCCCCAGGTTTCTAGGCGACGAGTGGAAATATTCTAAATGG GAAACCTCGTCGAAATATGAAATATGGGAGACAGGAGTAGAAGATCGTGG ATTCACGACCTGGTTCATTGATAGGACGTGAAATAAGATAGGAAGAATGG CAGGTAGAGAGACTGGCAGCACCGTATAATGGGCAACAGGGATACGTGGC AAGGATGGAAGGAATCCGGACGCAAAAGAAGAGAAGAGTGGGTATCGCTC ACTCAGCAGGAGACCAACAGAGCAGGAAAGAGCGGCACACAAGAGCCCAC CAAACGCGTAGAACACGGTGGAGGTGGATGGAGAAAAGGGAGCAAGAGAG GGTCGATTATTCAAAAAGACGAGTAGGTAGCGGAAGTCGTTCCTCTACGC GTCTGCCCTTCCGGTGCTGCACAACAGCAGATGGAGGAGGAAGGATGCGC TTAGACAGAACAGCGACTTTCTTGATCTCATGCGGACAAGTTACATGGCT GGTGACGAAAACATCGGTTTGGATACGGTACTTTCTGAACTATTTATGGG AGTGGTGGGTTTCCATATGAGCGCGCCGTTATGAGACCGAACTGCCAGTC GGAACATGTCATCAGTGGTCGATGGGAGGGAGCTCCCGAATAAAAGCGGG GGGCATCATTAGGCAGATTCTAAGTTCGACTCGTGTGGTCGTTTGTTGCA GGTGGAACCAAGACAAATGACGCATATACGAGACGAGAGCGATTTTGGTT GGTTCTCGTATTCCGAACACGGGGGGGGTGGTGGTAGCTTCCTGGAAGCA ACGAAATTTGCGGACAGACCGTCATGAGACGGGACTACCCGAATCTTGTG GCGAGTTAGTAGAGCACGCGAGAAGGGCCGTTCGGTACGGAGCCATTAAT ACGCACTTGAAAGTAGCGGTCGTTCGAAGGGGATACCCGACCGAGAGCGG GTCGTTATGGGTCGGAACCAAGTGGAACGTTTTGTTTGCGAGGGACATGC CCTATGAGTGGTTCGTTATGAGGCGGATTTTCCGGGAGATACATGAATTG AAGTGTAGGGCTACGTGGTACCTCAGTAGCAGGATGGTACCCGGAGCCGG CAATCGCAGTCCTGACGGCAGGCGGCATTCCACACGGAAAGGGAGTGTTA CTATTCGATCTTGGTTCACGAGCTATGGGACAGCCAGGTTTTCTGGTATC AGAAGGGGTAGACCTTCCTACGTAGGGTCCGGGAAAGGGGGCCAGTTCCG CCCTGCCACTGGTTTCCAGACGATGGGTGAAAATTTGGTACATTAAATAT TTTTGCAGCGTGGAAGACAACATTTTTGCTATTGAAACACGCATTTTTGC TGTTGAAGCACGATCAGTAAGCTTGGTGTCGGTTAGACAGGCTTTCATTC CGCGGAAGGTGTCTCACCTTTGTGTCTAGGGCCAGGAACGGGGGATGGGA CCGCCCTTCCCGGGTTTCTAAGTGAGGGGTGAAGCATGATGTATCAAGTT TTCCTGGGGAATTGAAGACGAAGCATTGTCGTGTCTTAATTTGCCATCCC GAGTGCAAAATTAATGGATTTTACACGTTTATTAGTAGGAAAATCTGAGA TAGGCCGCCAGTAGTCCAACTCGATGGTGATCACCGCTTACTGTCACTGC AAGGTAGAGACTTGAAGATGAAGCTGCTGAAGCTGATCTGCAGCCTTTAA CCTATTGGTCGCAATGCGCGTGCCCTTCCTCGCTTCTGCGCACAGCAGTG CCGGAGTGAGCTTCAGCTTCGTGGAGTAGACCTGGACAATAGGTCACGTT TGCTTCGAAGTATGAAACTGCACCAACCTCGCGTTGTTTTCCGACATGAA ATTATTCCACGGATGACGACCTGCCCGGCAAGTTATGCGACTCCCTGTGT GCTGGGTGGAAAGCATCGATACGGTAGCCATCCAGAAGAACATGCATCAG CCCAGTTTCCCTCTCGCTACTCCTTCGTACAACCTCGATACTTATCGGTG GGCAGTGCGCACGGCAGGTCATGAGCGAGTGGTCAGATTTGGTCATGGCG TTCGGACAGAGCGACGAGTTCAGCTTCCTGCTCCCGGCCTCGAGTCCACT GTACGGGAGGAGATCGGCGAAGCTGTCCACCTCATTCGTTTCTCTCTTTT CCTCGAGGTGAGCGCGTTTCTATACGAGCGAGAGGCATGAGACGAACTCG ACACGCTTTGAGCGTGGCTCGAGATGGAATTTCGCGTTTTGGTTTTAGAG AAACATAACGACAGCGTTGGAACACCTCCTGAGGTACGTCGTGCGAGGCG TAGCTCGAGGCTTCTCTTGAGCTCCAAACAATGGGTGTTCGTTGATGTGT AAGGTTCTGACGAAAGCATGAACAAGATGTATTTTTGTGTAACTTACCGC AATTTCATGTCGTAACACATAGTTCTTCGAAAATCAACTCGTTATCATCG TGAAATAGGCCAAATAATGTATCCGCGTTTTGGTTTGTCTTGGGGTAGAG ACCGTCGTTCTGCGTACGTGGCCATTTCATCTCCTTTCGTGGGTCTACGA GGTCTACGAGATCTACCCGGGGAAGTGTTCCCTCTTTCGCGCATAGCGTC TCACCAACGGGTGCTGGAGATGCATGAGTGTCATCTTGCTGCACCTATCC CCACAAGAGGGACTTGAGGCTGCCTACAAAATGAGTCACGTGCGATCATC TACGATCATAGCTCGCGAGCTCCACCCCTGTTTATGACGCGTTTCTTCAA CATCGGCTGCATGTCTTCCGTGTCTGACCCTTCTCTGTGCTTACCCGCCC AGCTTCGTCTTCTTTTGGTCGAAGCACTTCCCAGATACGCCCCTGCTCTA CCCGCCAAATTTCGACGCCAGAATAGTTTCCTATCCTTCGGCCCAGGTAA GCCCCAACGGGCAACGTCTACAGTAATATTTTGGCGGCAGCACAGGTAGT GGCGGTAATGTGTGCCGCGGCCTAGCCTGTGAGCGAAAAGCCGTGAAGTC TGCGTGCCCTCGTCCATGGATTCGAAGCACGCTGTTTTGTATTTTTGGTT TCCTCTCGACCTTACCTGTCAGGTTGCGCGGCCCTCTCCTTTGCAGGTGG GAGCGCAGAGGTACTGGCGTGTCTATTATAATAGGGGGAAAAGGCGCAGC CCGCACACGAACAAAGATAAAGCACAATCGAAACCAGGCTGAACGCCGTC TGCCTACACACTCTGCTGTCAGGCTTAGTGATTGCTCAGCCGTTTAATCA ATTTTCGCTCCTAGCCTGGCGTAGCGCTCTTTCCTGCGACGCCCGAACCT GACGAGACGAATCCGCCCTCCCCTCGTGTGTTGACCATGGTTGACGGTAA TGCGCAGCACGTCCGAGACTATTTTGCGTGGAGGCAAGCGGACTGCCACA TCAACAATCTGTACAATTCTTGCTTTTGGGCTCTGGTTGCTGATGGTGAG AAGTTGTGCGTGGAGGAGAACGTCTCCAACGTCTGTGTTTGCATGCGTCT TGTCTTGTCTGCGAAAAACGCTGTTAAATGATGTGCACGCCATCTCTCTC GACCTCTGGGAATTAGGACCTCCATGTCCTTTTTTTTTTTTAAAGAAAAC ATAACAACACCGTTAGAACACCTCCTCGAGTGCAATGGAGGTGAAAGTCT CCCTCAACCATGAAGCTGCAGGCAGCGAGTAACGTGATCTTGGGATCTTT CTTTTTCGCTCGAAATAAAACGTGTGTCGAGTTGATCAGTTCAAGCGCAC GGACGTTTGTGAAGCACGCCAACACAATCCTTGCTATCTCTACAGTATCC TGAAGAAGAGCACGTGCCTTGAGCCTCTTGTGGAACGCATCCACTCACTT GGTTGACACCCTCACGGCTGCTTATGTTCCTGCCGCCTCACAATTCCTGT CAGGAGTATCAAAGCAGGACGCCCAGGTAGCCCTCAAAGGCACCACCTCA GGCGACAAAAACGAGCTCCTGTTCTCGAGATTCAACACCAACTATAACGA GATCCCCCAGCGCTTCCGCAAGGGCACCACGTTATTCCGGGCTCGACCAA CTGCAGCGGGAGCCCCCTCGTCAGAGGCGTCACAGCAATCGCAAGAACAA GGTGGAGAAGGAGCGAACCTGGGCGGCCAGAGAACCGGGGGTCGCTCGGT GGACGCGGAAAATGTGACCAGCCGGGGGGACGCTGGCGAAGAGAAGTCGA CAGGACCGCAGGCAAGCGATGCCGCCAACATGGAGGCACCAGCGCCGGCC GCGGTGGAGCGTGGTCGAGCGACTGTTTCTCCTGCTGATGTAAAGCCCGG GTCGCATGTAGAGGCCGAGAAGGCGAATCGAGGCCAAGTGTCTGAAGGAG TTGCAAGTGTAGCCGGCAAGGATCAAGCCAGCGCTGCACCAGCCAAGGAT TGCGGCAAGGGGAAGGTCGCCACGAAGACGGGAACGGCGTCGGGGAATAA CGCTATCGTAAGGGTGGTTTCTTGCGGGGCCGGGAAGGGTAGGTCGAAGC GGCTCTTAAAGAAGGGCCACGCACCTCCTGGCGCCATTGAGGAGGAGGCG TGCGATCTCATCAGGGACGATTTTTGGGACAGAAACCCGCACATTCTGGC AGGGGGTGTGACCAGACGATGACAGCAGTTATACGTATTGGGAAAGGATG GGTCCTTTGTTTCTCGCGTTTCGAAGTCGCGTTTGCCTGCGACTGAGGAA TGAAAGTCTTCTTCTATTATTACCATTTCACATGATGTCTTGTGGGCGGA ATGCATGGAAAGGAGAGTAACGTCTTGCGCGCCGGGGTGTGCATTCAGCG TTTTAGTCTGGAATTCAGTTCAAGCCTTGGAAATTCGTCGACTGCAGGAG ATTCGGAATACCTGAACCTTTAAAACGTCTTCTGAGTTTTACCCCTGGTA TTCTGTATGAGTACGTGTGTTCACTTTTTGTGTCGATCGGGGCGGTCAGG AAAATAGCGGAGATGATTTGAAGATCAGGTTTCCAACAGAAACCAACAGC AACACGTCCTGTACCGCATGCTGAAAGCGGTCAAATGTAGGTATGTAACG AAGGCATTTTTTTCC
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1168:338..10902-

>mRNA_H-canaliculatus_F_contig1168.1484.1 ID=mRNA_H-canaliculatus_F_contig1168.1484.1|Name=mRNA_H-canaliculatus_F_contig1168.1484.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2874bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1168:338..10902- (Hapterophycus canaliculatus Oshoro5f female)
ATGATAGTGAGGCAGCAGCATCACCTTGGCTACATACCTGCCATTACCTT
CACGAACCGCCACAGCAACAGCGGAATTCATTGTGTTTCCAGTCTCGGAC
AGGGCGTGGTAAACGCCCGGCGTATCCAGACCCTCGCGAAGGTTGACTTC
GGACGCACAGATTCTTCTTCGCGGCAACAGCTCTTCGACTCTACCGCTTG
CGCTGCATCGCCTACCATGGCCAACAGCAGATTCCAGTACGTGAAGAAGT
TCGAGCTGTCCGACGCACTACTGCCAGACACATACCTGATTGCCAGGCTG
GATGGCCATAGATTTACCAAGTTTACGGCAGATCACGGGTTCAGCAAGCC
CAATGATGAGCGAGGGCTGGCGCTCATGGCTGAGATGATAGTGAGGCAGC
AGCATCACCTTGGCTACATACCTGCCATTACCTTCACGAACCGCCACAGC
AACAGCGGAATTCATTGTGTTTCCAGTCTCGGACAGGGCGTGGTAAACGC
CCGGCGTATCCAGACCCTCGCGAAGGTTGACTTCGGACGCACAGATTCTT
CTTCGCGGCAACAGCTCTTCGACTCTACCGCTTGCGCTGCATCGCCTACC
ATGGCCAACAGCAGATTCCAGTACGTGAAGAAGTTCGAGCTGTCCGACGC
ACTACTGCCAGACACATACCTGATTGCCAGGCTGGATGGCCATAGATTTA
CCAAGTTTACGGCAGATCACGGGTTCAGCAAGCCCAATGATGAGCGAGGG
CTGGCGCTCATGGCTGAGTGCGCACGGCAGGTCATGAGCGAGTGGTCAGA
TTTGGTCATGGCGTTCGGACAGAGCGACGAGTTCAGCTTCCTGCTCCCGG
CCTCGAGTCCACTGTACGGGAGGAGATCGGCGAAGCTGTCCACCTCATTC
GTTTCTCTCTTTTCCTCGAGTGCGCACGGCAGGTCATGAGCGAGTGGTCA
GATTTGGTCATGGCGTTCGGACAGAGCGACGAGTTCAGCTTCCTGCTCCC
GGCCTCGAGTCCACTGTACGGGAGGAGATCGGCGAAGCTGTCCACCTCAT
TCGTTTCTCTCTTTTCCTCGAGCTTCGTCTTCTTTTGGTCGAAGCACTTC
CCAGATACGCCCCTGCTCTACCCGCCAAATTTCGACGCCAGAATAGTTTC
CTATCCTTCGGCCCAGCTTCGTCTTCTTTTGGTCGAAGCACTTCCCAGAT
ACGCCCCTGCTCTACCCGCCAAATTTCGACGCCAGAATAGTTTCCTATCC
TTCGGCCCAGCACGTCCGAGACTATTTTGCGTGGAGGCAAGCGGACTGCC
ACATCAACAATCTGTACAATTCTTGCTTTTGGGCTCTGGTTGCTGATGCA
CGTCCGAGACTATTTTGCGTGGAGGCAAGCGGACTGCCACATCAACAATC
TGTACAATTCTTGCTTTTGGGCTCTGGTTGCTGATGGAGTATCAAAGCAG
GACGCCCAGGTAGCCCTCAAAGGCACCACCTCAGGCGACAAAAACGAGCT
CCTGTTCTCGAGATTCAACACCAACTATAACGAGATCCCCCAGCGCTTCC
GCAAGGGCACCACGTTATTCCGGGCTCGACCAACTGCAGCGGGAGCCCCC
TCGTCAGAGGCGTCACAGCAATCGCAAGAACAAGGTGGAGAAGGAGCGAA
CCTGGGCGGCCAGAGAACCGGGGGTCGCTCGGTGGACGCGGAAAATGTGA
CCAGCCGGGGGGACGCTGGCGAAGAGAAGTCGACAGGACCGCAGGCAAGC
GATGCCGCCAACATGGAGGCACCAGCGCCGGCCGCGGTGGAGCGTGGTCG
AGCGACTGTTTCTCCTGCTGATGTAAAGCCCGGGTCGCATGTAGAGGCCG
AGAAGGCGAATCGAGGCCAAGTGTCTGAAGGAGTTGCAAGTGTAGCCGGC
AAGGATCAAGCCAGCGCTGCACCAGCCAAGGATTGCGGCAAGGGGAAGGT
CGCCACGAAGACGGGAACGGCGTCGGGGAATAACGCTATCGTAAGGGTGG
TTTCTTGCGGGGCCGGGAAGGGTAGGTCGAAGCGGCTCTTAAAGAAGGGC
CACGCACCTCCTGGCGCCATTGAGGAGGAGGCGTGCGATCTCATCAGGGA
CGATTTTTGGGACAGAAACCCGCACATTCTGGCAGGGGGTGTGACCAGAC
GATGAGAGTATCAAAGCAGGACGCCCAGGTAGCCCTCAAAGGCACCACCT
CAGGCGACAAAAACGAGCTCCTGTTCTCGAGATTCAACACCAACTATAAC
GAGATCCCCCAGCGCTTCCGCAAGGGCACCACGTTATTCCGGGCTCGACC
AACTGCAGCGGGAGCCCCCTCGTCAGAGGCGTCACAGCAATCGCAAGAAC
AAGGTGGAGAAGGAGCGAACCTGGGCGGCCAGAGAACCGGGGGTCGCTCG
GTGGACGCGGAAAATGTGACCAGCCGGGGGGACGCTGGCGAAGAGAAGTC
GACAGGACCGCAGGCAAGCGATGCCGCCAACATGGAGGCACCAGCGCCGG
CCGCGGTGGAGCGTGGTCGAGCGACTGTTTCTCCTGCTGATGTAAAGCCC
GGGTCGCATGTAGAGGCCGAGAAGGCGAATCGAGGCCAAGTGTCTGAAGG
AGTTGCAAGTGTAGCCGGCAAGGATCAAGCCAGCGCTGCACCAGCCAAGG
ATTGCGGCAAGGGGAAGGTCGCCACGAAGACGGGAACGGCGTCGGGGAAT
AACGCTATCGTAAGGGTGGTTTCTTGCGGGGCCGGGAAGGGTAGGTCGAA
GCGGCTCTTAAAGAAGGGCCACGCACCTCCTGGCGCCATTGAGGAGGAGG
CGTGCGATCTCATCAGGGACGATTTTTGGGACAGAAACCCGCACATTCTG
GCAGGGGGTGTGACCAGACGATGA
back to top