mRNA_H-canaliculatus_F_contig11670.1479.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig11670.1479.1 vs. uniprot
Match: D8LH37_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH37_ECTSI) HSP 1 Score: 204 bits (519), Expect = 2.130e-65 Identity = 101/137 (73.72%), Postives = 119/137 (86.86%), Query Frame = 1
Query: 1 LYPPGTEQLKDIITNYSSLTGSDKWTLQSMMLLVFRVVLGNVEAMKKNMKKAEIKELKAIWGTEEKVLDVLQKLIQVASHLSFAVRAPSHNDEELKNLDLLARDVVGFYSQVMGRAGARPTIHSILHTVEAVRLRGE 411
LYP GTE+LKDI++NYSSLTGSDKWTLQS+MLLVFR VL MKKNMK+ ++ +L+ +WGT+ KVL+VLQ+L+QVASHLS+AVRAPSHND EL LDLLARDVVGFYS+VMGR G+RPTIHSILHT EA+R GE
Sbjct: 8 LYPAGTERLKDIVSNYSSLTGSDKWTLQSIMLLVFRPVL----VMKKNMKRQDVNDLREMWGTDGKVLEVLQQLVQVASHLSYAVRAPSHNDRELSQLDLLARDVVGFYSKVMGRTGSRPTIHSILHTTEAIRAHGE 140
BLAST of mRNA_H-canaliculatus_F_contig11670.1479.1 vs. uniprot
Match: A0A6H5J9E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9E1_9PHAE) HSP 1 Score: 209 bits (533), Expect = 2.570e-60 Identity = 104/136 (76.47%), Postives = 120/136 (88.24%), Query Frame = 1
Query: 1 LYPPGTEQLKDIITNYSSLTGSDKWTLQSMMLLVFRVVLGNVEAMKKNMKKAEIKELKAIWGTEEKVLDVLQKLIQVASHLSFAVRAPSHNDEELKNLDLLARDVVGFYSQVMGRAGARPTIHSILHTVEAVRLRG 408
LYP GTE+LKDI+TNYSSLTGSDKWTLQS+MLLVFR VL NV AMKKNMK+ +I EL+ +WGT+EKVL+VLQKLI+VASHLS AVRAPSHND EL LDLLARDVVG YS+V+GR G+RPTIHS+LHT +A+R G
Sbjct: 565 LYPAGTERLKDIVTNYSSLTGSDKWTLQSIMLLVFRPVLANVGAMKKNMKRQDIAELRDVWGTDEKVLEVLQKLIEVASHLSCAVRAPSHNDLELAQLDLLARDVVGVYSKVLGRTGSRPTIHSVLHTSQAIRAHG 700
BLAST of mRNA_H-canaliculatus_F_contig11670.1479.1 vs. uniprot
Match: A0A6H5KXT2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXT2_9PHAE) HSP 1 Score: 175 bits (443), Expect = 2.790e-52 Identity = 91/137 (66.42%), Postives = 110/137 (80.29%), Query Frame = 1
Query: 1 LYPPGTEQLKDIITNYSSLTGSDKWTLQSMMLLVFRVVLGNVEAMKKNMKKAEIKELKAIWGTEEKVLDVLQKLIQVASHLSFAVRAPSHNDEELKNLDLLARDVVGFYSQVMGRAGARPTIHSILHTVEAVRLRGE 411
LYPPGTE+LKDI+TNY+SLTGSDKWTLQS+MLLVFR+VL NV AM + EI +LKA WGT E VL+ L++L++ AS LS A+RAPS + EL LD LARD VG + ++MGR G+RPTIHSILHTVEA+RL GE
Sbjct: 122 LYPPGTEKLKDIVTNYTSLTGSDKWTLQSIMLLVFRMVLQNVPAMTR-----EINDLKAEWGTYEDVLEALRELLKRASLLSIALRAPSFTEPELLQLDKLARDAVGAFFKIMGRTGSRPTIHSILHTVEAIRLHGE 253
BLAST of mRNA_H-canaliculatus_F_contig11670.1479.1 vs. uniprot
Match: A0A6H5KLQ7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLQ7_9PHAE) HSP 1 Score: 185 bits (470), Expect = 4.470e-52 Identity = 93/138 (67.39%), Postives = 116/138 (84.06%), Query Frame = 1
Query: 1 LYPPGTEQLKDIITNYSSLTGSDKWTLQSMMLLVFRVVLGNVEAMKKNMKKAEIKELKAIWGTEEKVLDVLQKLIQVASHLSFAVRAPSHNDEELKNLDLLARDV--VGFYSQVMGRAGARPTIHSILHTVEAVRLRG 408
LYPPGT++LKDI+T+Y SLTGSDKWTLQS+MLLVFRVVL ++ +M++NMKK ++K KA WGT E VLD L+ LIQ+ S LSFA+RAPS+ND+EL+ LD LARD VG +SQ+MGR G+RPTIHS+LH VEA+RL G
Sbjct: 290 LYPPGTDKLKDILTDYPSLTGSDKWTLQSIMLLVFRVVLQDIPSMRRNMKKRDMKAFKAEWGTYESVLDALRTLIQMVSLLSFALRAPSYNDKELRQLDNLARDAPGVGAFSQMMGRTGSRPTIHSMLHAVEAIRLHG 427
BLAST of mRNA_H-canaliculatus_F_contig11670.1479.1 vs. uniprot
Match: A0A6H5JWD2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWD2_9PHAE) HSP 1 Score: 163 bits (413), Expect = 5.400e-49 Identity = 81/106 (76.42%), Postives = 95/106 (89.62%), Query Frame = 1
Query: 1 LYPPGTEQLKDIITNYSSLTGSDKWTLQSMMLLVFRVVLGNVEAMKKNMKKAEIKELKAIWGTEEKVLDVLQKLIQVASHLSFAVRAPSHNDEELKNLDLLARDVV 318
LYP GTE+LKDI++NYSSLTGSDKWTLQS+MLLVFR VL +V AMKKNMK+ +I +L+ IWGT+ KVL+VLQ+L+QVASHLS+AVRAPSHND EL LDLLARDVV
Sbjct: 52 LYPAGTERLKDIVSNYSSLTGSDKWTLQSIMLLVFRPVLQDVRAMKKNMKRQDINDLREIWGTDGKVLEVLQQLVQVASHLSYAVRAPSHNDRELSQLDLLARDVV 157
BLAST of mRNA_H-canaliculatus_F_contig11670.1479.1 vs. uniprot
Match: A0A6H5K9M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9M0_9PHAE) HSP 1 Score: 175 bits (443), Expect = 4.460e-48 Identity = 88/136 (64.71%), Postives = 110/136 (80.88%), Query Frame = 1
Query: 1 LYPPGTEQLKDIITNYSSLTGSDKWTLQSMMLLVFRVVLGNVEAMKKNMKKAEIKELKAIWGTEEKVLDVLQKLIQVASHLSFAVRAPSHNDEELKNLDLLARDVVGFYSQVMGRAGARPTIHSILHTVEAVRLRG 408
LYPPGT ++KDI+TNY+SLTGSDKWTLQS+MLLVFR+VL NV AM++NM EI LKA WGT E +L+ L++L+ +S LSFA+RAPS + EL+ LD LARD V +S++MGR G+RPTIHSILHTVE +RL G
Sbjct: 858 LYPPGTGKIKDIVTNYASLTGSDKWTLQSIMLLVFRMVLQNVPAMRRNMNTREINGLKAEWGTYEGLLEALRELMIRSSLLSFALRAPSFTEPELRQLDKLARDAVEAFSKIMGRTGSRPTIHSILHTVETIRLHG 993
BLAST of mRNA_H-canaliculatus_F_contig11670.1479.1 vs. uniprot
Match: D7G2D4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2D4_ECTSI) HSP 1 Score: 158 bits (399), Expect = 1.710e-43 Identity = 78/106 (73.58%), Postives = 92/106 (86.79%), Query Frame = 1
Query: 1 LYPPGTEQLKDIITNYSSLTGSDKWTLQSMMLLVFRVVLGNVEAMKKNMKKAEIKELKAIWGTEEKVLDVLQKLIQVASHLSFAVRAPSHNDEELKNLDLLARDVV 318
LYP GTE+LKD+++NYSSLTGSDKWTLQS+MLLVFR V + AMKKNMK+ I +L+ IWGT+ KVL+VLQ+L+QVASHLS+AVRAPSHND EL LDLLARDVV
Sbjct: 382 LYPAGTERLKDMVSNYSSLTGSDKWTLQSIMLLVFRPVFQDFRAMKKNMKRQNINDLREIWGTDGKVLEVLQQLVQVASHLSYAVRAPSHNDRELSQLDLLARDVV 487
BLAST of mRNA_H-canaliculatus_F_contig11670.1479.1 vs. uniprot
Match: D7G0R9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0R9_ECTSI) HSP 1 Score: 134 bits (337), Expect = 1.320e-37 Identity = 72/133 (54.14%), Postives = 94/133 (70.68%), Query Frame = 1
Query: 1 LYPPGTEQLKDIITNYSSLTGSDKWTLQSMMLLVFRVVLGNVEAMKKNMKKAEIKELKAIWGTEEKVLDVLQKLIQVASHLSFAVRAPSHNDEELKNLDLLARDVVGFYSQVMGRAGARPTIHSILHTVEAVR 399
LYPP + LKDI+TNYSSLTGS+KW L +MLLVFR VL + +M K K+ +K L++ WG + + L KL+Q AS LSFAVRAPSHNDEEL+ L A+D+V +V+G+ G RP++HS LH EAV+
Sbjct: 14 LYPPREKPLKDIVTNYSSLTGSNKWLLSPIMLLVFRQVLQSSWSMVKYFKQDLVKTLESNWGNQTGAWEDLLKLVQSASALSFAVRAPSHNDEELQQLHKHAQDMVHVAKEVIGKDGVRPSMHSTLHYSEAVK 146
BLAST of mRNA_H-canaliculatus_F_contig11670.1479.1 vs. uniprot
Match: A0A6H5KBT3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBT3_9PHAE) HSP 1 Score: 130 bits (327), Expect = 1.720e-36 Identity = 64/104 (61.54%), Postives = 84/104 (80.77%), Query Frame = 1
Query: 1 LYPPGTEQLKDIITNYSSLTGSDKWTLQSMMLLVFRVVLGNVEAMKKNMKKAEIKELKAIWGTEEKVLDVLQKLIQVASHLSFAVRAPSHNDEELKNLDLLARD 312
LYPPGT +LKD++TNY+SL GSDKWTLQS++LL+FR+VL +V AM++NM EIK+L WGT +KVL+ L++L++ AS LSFA+RAPS D EL+ LD LA D
Sbjct: 21 LYPPGTRKLKDVVTNYASLNGSDKWTLQSIILLIFRMVLQDVSAMRRNMMTREIKDLVTEWGTYDKVLEALRELMKRASLLSFALRAPSFTDPELRQLDKLAHD 124
BLAST of mRNA_H-canaliculatus_F_contig11670.1479.1 vs. uniprot
Match: A0A6H5KDY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDY2_9PHAE) HSP 1 Score: 134 bits (338), Expect = 1.990e-36 Identity = 66/104 (63.46%), Postives = 86/104 (82.69%), Query Frame = 1
Query: 1 LYPPGTEQLKDIITNYSSLTGSDKWTLQSMMLLVFRVVLGNVEAMKKNMKKAEIKELKAIWGTEEKVLDVLQKLIQVASHLSFAVRAPSHNDEELKNLDLLARD 312
LYPPGT +LKD++TNY+SL GSDKWTLQS++LL+FR+VL +V AM++NMK EIK+L WGT +KVL+ L++L++ AS LSFA+RAPS D EL+ LD LARD
Sbjct: 151 LYPPGTRKLKDVVTNYASLNGSDKWTLQSIILLIFRMVLQDVSAMRRNMKTREIKDLVTEWGTYDKVLEALRELMKRASLLSFALRAPSFTDPELRQLDKLARD 254 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11670.1479.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig11670.1479.1 >prot_H-canaliculatus_F_contig11670.1479.1 ID=prot_H-canaliculatus_F_contig11670.1479.1|Name=mRNA_H-canaliculatus_F_contig11670.1479.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=137bp LYPPGTEQLKDIITNYSSLTGSDKWTLQSMMLLVFRVVLGNVEAMKKNMKback to top mRNA from alignment at H-canaliculatus_F_contig11670:205..2943- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig11670.1479.1 ID=mRNA_H-canaliculatus_F_contig11670.1479.1|Name=mRNA_H-canaliculatus_F_contig11670.1479.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2739bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11670:205..2943- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11670:205..2943- >mRNA_H-canaliculatus_F_contig11670.1479.1 ID=mRNA_H-canaliculatus_F_contig11670.1479.1|Name=mRNA_H-canaliculatus_F_contig11670.1479.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=822bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11670:205..2943- (Hapterophycus canaliculatus Oshoro5f female)back to top |