prot_H-canaliculatus_F_contig1012.147.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1012.147.1
Unique Nameprot_H-canaliculatus_F_contig1012.147.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length73
Homology
BLAST of mRNA_H-canaliculatus_F_contig1012.147.1 vs. uniprot
Match: D7FM71_ECTSI (60S ribosomal protein L38 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM71_ECTSI)

HSP 1 Score: 141 bits (356), Expect = 1.040e-42
Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 0
Query:    2 PKQIHDIRDFLQKARRRDAKSVKIKNNKATHSTKFKIRCSRYLYTLCVTDKEKADKLTQSLPPGLHKKQIQ 72
            PKQIHDIRDFLQKARRRDAKSVKIKNNKATHSTKFKIRCSRYLYTLCVTDKEKADKLTQSLPPGLHKKQ+Q
Sbjct:    2 PKQIHDIRDFLQKARRRDAKSVKIKNNKATHSTKFKIRCSRYLYTLCVTDKEKADKLTQSLPPGLHKKQLQ 72          
BLAST of mRNA_H-canaliculatus_F_contig1012.147.1 vs. uniprot
Match: A0A836CJ21_9STRA (Ribosomal protein L38 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ21_9STRA)

HSP 1 Score: 112 bits (279), Expect = 5.390e-31
Identity = 58/70 (82.86%), Postives = 61/70 (87.14%), Query Frame = 0
Query:    2 PKQIHDIRDFLQKARRRDAKSVKIKNNKATHSTKFKIRCSRYLYTLCVTDKEKADKLTQSLPPGLHKKQI 71
            PKQIHDIRDFLQKARR+DAKSVKIK  K    TKFKIRCSRYLYTLCV DK+KADKLTQSLPPGL +K I
Sbjct:    2 PKQIHDIRDFLQKARRKDAKSVKIK--KTAEVTKFKIRCSRYLYTLCVADKDKADKLTQSLPPGLQRKDI 69          
BLAST of mRNA_H-canaliculatus_F_contig1012.147.1 vs. uniprot
Match: A0A485KGK6_9STRA (Aste57867_4412 protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485KGK6_9STRA)

HSP 1 Score: 104 bits (260), Expect = 4.270e-28
Identity = 55/70 (78.57%), Postives = 59/70 (84.29%), Query Frame = 0
Query:    2 PKQIHDIRDFLQKARRRDAKSVKIKNNKATHSTKFKIRCSRYLYTLCVTDKEKADKLTQSLPPGLHKKQI 71
            PKQI DIRDFLQKARR+DA+SVKIK  K     KFKIRCS+YLYTLCVTD EKADKLTQSLPPGL +K I
Sbjct:    2 PKQITDIRDFLQKARRKDARSVKIK--KTAQVVKFKIRCSKYLYTLCVTDTEKADKLTQSLPPGLQRKDI 69          
BLAST of mRNA_H-canaliculatus_F_contig1012.147.1 vs. uniprot
Match: W2IQQ0_PHYPR (60S ribosomal protein L38 n=16 Tax=Peronosporaceae TaxID=4777 RepID=W2IQQ0_PHYPR)

HSP 1 Score: 104 bits (259), Expect = 6.070e-28
Identity = 55/70 (78.57%), Postives = 60/70 (85.71%), Query Frame = 0
Query:    2 PKQIHDIRDFLQKARRRDAKSVKIKNNKATHSTKFKIRCSRYLYTLCVTDKEKADKLTQSLPPGLHKKQI 71
            PKQI DIRDFLQKARR+DA+SVKIK  K+    KFKIRCS+YLYTLCVTD EKADKLTQSLPPGL +K I
Sbjct:    2 PKQITDIRDFLQKARRKDARSVKIK--KSDKVVKFKIRCSKYLYTLCVTDTEKADKLTQSLPPGLQRKDI 69          
BLAST of mRNA_H-canaliculatus_F_contig1012.147.1 vs. uniprot
Match: A0A067CFE6_SAPPC (60S ribosomal protein L38 n=3 Tax=Oomycota TaxID=4762 RepID=A0A067CFE6_SAPPC)

HSP 1 Score: 104 bits (259), Expect = 6.070e-28
Identity = 55/70 (78.57%), Postives = 59/70 (84.29%), Query Frame = 0
Query:    2 PKQIHDIRDFLQKARRRDAKSVKIKNNKATHSTKFKIRCSRYLYTLCVTDKEKADKLTQSLPPGLHKKQI 71
            PKQI DIRDFLQKARR+DA+SVKIK  K     KFKIRCS+YLYTLCVTD EKADKLTQSLPPGL +K I
Sbjct:    2 PKQITDIRDFLQKARRKDARSVKIK--KTPQVVKFKIRCSKYLYTLCVTDTEKADKLTQSLPPGLQRKDI 69          
BLAST of mRNA_H-canaliculatus_F_contig1012.147.1 vs. uniprot
Match: M4BFU5_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BFU5_HYAAE)

HSP 1 Score: 104 bits (259), Expect = 1.030e-27
Identity = 55/70 (78.57%), Postives = 60/70 (85.71%), Query Frame = 0
Query:    2 PKQIHDIRDFLQKARRRDAKSVKIKNNKATHSTKFKIRCSRYLYTLCVTDKEKADKLTQSLPPGLHKKQI 71
            PKQI DIRDFLQKARR+DA+SVKIK  K+    KFKIRCS+YLYTLCVTD EKADKLTQSLPPGL +K I
Sbjct:   21 PKQITDIRDFLQKARRKDARSVKIK--KSDKVVKFKIRCSKYLYTLCVTDTEKADKLTQSLPPGLQRKDI 88          
BLAST of mRNA_H-canaliculatus_F_contig1012.147.1 vs. uniprot
Match: A0A1E7ETU4_9STRA (Ribosomal protein L38 n=2 Tax=Bacillariaceae TaxID=33852 RepID=A0A1E7ETU4_9STRA)

HSP 1 Score: 103 bits (257), Expect = 1.230e-27
Identity = 56/70 (80.00%), Postives = 58/70 (82.86%), Query Frame = 0
Query:    2 PKQIHDIRDFLQKARRRDAKSVKIKNNKATHSTKFKIRCSRYLYTLCVTDKEKADKLTQSLPPGLHKKQI 71
            PKQI DIRDFLQKARR DAK VKIK  K    TKFKIRCSR+LYTLCVTD EKADKLTQSLPPGL +K I
Sbjct:    2 PKQITDIRDFLQKARRSDAKLVKIK--KRDSQTKFKIRCSRFLYTLCVTDAEKADKLTQSLPPGLQRKSI 69          
BLAST of mRNA_H-canaliculatus_F_contig1012.147.1 vs. uniprot
Match: F0Y0E5_AURAN (Ribosomal protein L38 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y0E5_AURAN)

HSP 1 Score: 102 bits (253), Expect = 5.000e-27
Identity = 55/70 (78.57%), Postives = 58/70 (82.86%), Query Frame = 0
Query:    2 PKQIHDIRDFLQKARRRDAKSVKIKNNKATHSTKFKIRCSRYLYTLCVTDKEKADKLTQSLPPGLHKKQI 71
            PK+I DIRDFLQKARRRDAKSVKIK  K     KFKIRCSRYLYTL V+D EKADKLTQSLPPGL +K I
Sbjct:    2 PKEISDIRDFLQKARRRDAKSVKIKKTKGV--VKFKIRCSRYLYTLRVSDTEKADKLTQSLPPGLQRKDI 69          
BLAST of mRNA_H-canaliculatus_F_contig1012.147.1 vs. uniprot
Match: K3WQ98_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WQ98_GLOUD)

HSP 1 Score: 101 bits (252), Expect = 8.130e-27
Identity = 55/70 (78.57%), Postives = 59/70 (84.29%), Query Frame = 0
Query:    2 PKQIHDIRDFLQKARRRDAKSVKIKNNKATHSTKFKIRCSRYLYTLCVTDKEKADKLTQSLPPGLHKKQI 71
            PKQI DIRDFLQKARR+DA+SVKIK  KA    KFKIRCS+YLYTL VTD EKADKLTQSLPPGL +K I
Sbjct:    7 PKQITDIRDFLQKARRKDARSVKIK--KADKVVKFKIRCSKYLYTLVVTDAEKADKLTQSLPPGLQRKDI 74          
BLAST of mRNA_H-canaliculatus_F_contig1012.147.1 vs. uniprot
Match: H3G589_PHYRM (Uncharacterized protein n=3 Tax=Peronosporaceae TaxID=4777 RepID=H3G589_PHYRM)

HSP 1 Score: 100 bits (250), Expect = 1.220e-26
Identity = 53/65 (81.54%), Postives = 57/65 (87.69%), Query Frame = 0
Query:    1 QPKQIHDIRDFLQKARRRDAKSVKIKNNKATHSTKFKIRCSRYLYTLCVTDKEKADKLTQSLPPG 65
            QPKQI DIRDFLQKARR+DA+SVKIK  K+    KFKIRCS+YLYTLCVTD EKADKLTQSLPPG
Sbjct:    1 QPKQITDIRDFLQKARRKDARSVKIK--KSDKVVKFKIRCSKYLYTLCVTDTEKADKLTQSLPPG 63          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1012.147.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FM71_ECTSI1.040e-4298.5960S ribosomal protein L38 n=2 Tax=Ectocarpus TaxID... [more]
A0A836CJ21_9STRA5.390e-3182.86Ribosomal protein L38 n=1 Tax=Tribonema minus TaxI... [more]
A0A485KGK6_9STRA4.270e-2878.57Aste57867_4412 protein n=3 Tax=Saprolegniaceae Tax... [more]
W2IQQ0_PHYPR6.070e-2878.5760S ribosomal protein L38 n=16 Tax=Peronosporaceae... [more]
A0A067CFE6_SAPPC6.070e-2878.5760S ribosomal protein L38 n=3 Tax=Oomycota TaxID=4... [more]
M4BFU5_HYAAE1.030e-2778.57Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A1E7ETU4_9STRA1.230e-2780.00Ribosomal protein L38 n=2 Tax=Bacillariaceae TaxID... [more]
F0Y0E5_AURAN5.000e-2778.57Ribosomal protein L38 n=1 Tax=Aureococcus anophage... [more]
K3WQ98_GLOUD8.130e-2778.57Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
H3G589_PHYRM1.220e-2681.54Uncharacterized protein n=3 Tax=Peronosporaceae Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002675Ribosomal protein L38ePFAMPF01781Ribosomal_L38ecoord: 2..71
e-value: 9.0E-35
score: 118.6
IPR002675Ribosomal protein L38ePANTHERPTHR1096560S RIBOSOMAL PROTEIN L38coord: 2..70
IPR038464Ribosomal protein L38e superfamilyGENE3D3.30.720.90coord: 1..72
e-value: 9.6E-33
score: 114.1
NoneNo IPR availablePRODOMPD010361coord: 1..71
e-value: 1.0E-22
score: 257.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1012contigH-canaliculatus_F_contig1012:13837..16797 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1012.147.1mRNA_H-canaliculatus_F_contig1012.147.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1012 12313..16797 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1012.147.1 ID=prot_H-canaliculatus_F_contig1012.147.1|Name=mRNA_H-canaliculatus_F_contig1012.147.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=73bp
QPKQIHDIRDFLQKARRRDAKSVKIKNNKATHSTKFKIRCSRYLYTLCVT
DKEKADKLTQSLPPGLHKKQIQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038464Ribosomal_L38e_sf
IPR002675Ribosomal_L38e