mRNA_H-canaliculatus_F_contig11668.1474.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig11668.1474.1 vs. uniprot
Match: A0A6H5JN40_9PHAE (Importin N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JN40_9PHAE) HSP 1 Score: 319 bits (818), Expect = 4.620e-100 Identity = 155/178 (87.08%), Postives = 169/178 (94.94%), Query Frame = 1
Query: 1 DDDAAMAASQVIEAVSTVLQSTRAVPELFPAMESHLLPMLAQIFSEDGDLMEYIENACDVLSFLTYYGPGISQQLWSVFPMLYRTWDKWAFDLISNLAVPIDNYVSRGTDVFVEGRTPEGARYVEMLLDMCQRVLKDPRQTEKEARTAAQLLMVVLHNCKGRIDEYVPSMLGMLSERV 534
DDDAAMAASQVIEAVSTVLQST+AVPELFPAMESHLLPMLAQ+FSEDGDL+EYIENACDVLSFLTYYG GIS+QLWSVFPMLYRTWDKWAFDLISN+AVPIDNY+SRGTDVF+ GR+ EG RY+EMLLDMC RV+KD RQ+EKEARTA QL+MVVLHNCKGRIDEY+P +L MLSERV
Sbjct: 611 DDDAAMAASQVIEAVSTVLQSTKAVPELFPAMESHLLPMLAQVFSEDGDLIEYIENACDVLSFLTYYGAGISEQLWSVFPMLYRTWDKWAFDLISNMAVPIDNYISRGTDVFIAGRSAEGDRYIEMLLDMCGRVMKDERQSEKEARTAVQLMMVVLHNCKGRIDEYIPPILAMLSERV 788
BLAST of mRNA_H-canaliculatus_F_contig11668.1474.1 vs. uniprot
Match: A0A6U2DQK1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A6U2DQK1_9STRA) HSP 1 Score: 157 bits (397), Expect = 2.690e-44 Identity = 75/174 (43.10%), Postives = 115/174 (66.09%), Query Frame = 1
Query: 1 DDDAAMAASQVIEAVSTVLQSTRAVPELFPAMESHLLPMLAQIFSEDGDLMEYIENACDVLSFLTYYGPGISQQLWSVFPMLYRTWDKWAFDLISNLAVPIDNYVSRGTDVFVEGR--TPEGAR--YVEMLLDMCQRVLKDPRQTEKEARTAAQLLMVVLHNCKGRIDEYVPSM 510
DDDAAMAA+Q +E V+TVL+ PEL+ +ME L+P+ QI DG+ +EY+E A D+L+FLTY+ IS QLW FP++Y +D+WAFD ++ + P++N++ + F++G TP+GA Y++++ M + + + R +E E R A L M VLHNC+G +D Y+P M
Sbjct: 82 DDDAAMAAAQCLECVATVLKGICERPELYKSMEPQLVPLCLQILGNDGEYIEYLEYALDILTFLTYFPDEISPQLWEAFPLIYVAFDQWAFDYLNLMVPPLENFIGKSPRQFLQGTATTPDGATVSYIDLVFSMVAKTVAEERSSESECRKAVSLYMSVLHNCRGLVDAYLPMM 255
BLAST of mRNA_H-canaliculatus_F_contig11668.1474.1 vs. uniprot
Match: A0A835YT27_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT27_9STRA) HSP 1 Score: 161 bits (408), Expect = 1.070e-42 Identity = 83/192 (43.23%), Postives = 120/192 (62.50%), Query Frame = 1
Query: 1 DDDAAMAASQVIEAVSTVLQSTRAVPELFPAMESHLLPMLAQIFSEDGDLMEYIENACDVLSFLTYYGPGISQQLWSVFPMLYRTWDKWAFDLISNLAVPIDNYVSRGTDVFVEGRTPEGARYVEMLLDMCQR--------------VLKDPRQTEKEARTAAQLLMVVLHNCKGRIDEYVPSMLGMLSERV 534
DDDAAMAA Q +EAV+TVL S P L+PAME L+PML I S DG+ +EY ENA +V++ +S LWS FP+L+ +DKWA D ++N+ PI+N++SR + + G TP+G YV ++++M + VL D RQTE E + AQLL LHNC+G +D +VP++L +++ R+
Sbjct: 614 DDDAAMAAGQCMEAVTTVLHSAHRTPNLYPAMEECLMPMLRTILSNDGEYIEYFENAVEVIA------AHVSPTLWSTFPLLFDAFDKWAADYVTNIRTPIENFISRDSKTYACGATPQGVPYVTLVVNMARAXXXXXXXXXXXXHAVLADQRQTEAEGKAVAQLLSSTLHNCRGLVDAHVPAVLDIVAARM 799
BLAST of mRNA_H-canaliculatus_F_contig11668.1474.1 vs. uniprot
Match: A0A7S0C708_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C708_9STRA) HSP 1 Score: 153 bits (386), Expect = 1.800e-41 Identity = 65/165 (39.39%), Postives = 113/165 (68.48%), Query Frame = 1
Query: 7 DAAMAASQVIEAVSTVLQSTRAVPELFPAMESHLLPMLAQIFSEDGDLMEYIENACDVLSFLTYYGPGISQQLWSVFPMLYRTWDKWAFDLISNLAVPIDNYVSRGTDVFVEGRTPEGARYVEMLLDMCQRVLKDPRQTEKEARTAAQLLMVVLHNCKGRIDEYV 501
D+AMAA+Q +E ++TVL+ P+LF +E +L+P++ +I DG+ +EY+E A D+L+FLTY+ +S QLW FP++Y+++D++AFD +S + +P++N++ + D F+ T +G +Y++++ + R L + R +E E R A L M VLHNC G++D Y+
Sbjct: 1 DSAMAAAQCLECIATVLKGICMRPDLFKHLEPNLIPIILKILGNDGEFIEYLEYALDILTFLTYFPTELSPQLWEAFPLIYQSFDQYAFDYLSLMVMPLENFIGKSPDYFLAAVTSDGVKYIDLIFKIVGRTLAEDRSSESECRKALSLYMTVLHNCNGKVDSYL 165
BLAST of mRNA_H-canaliculatus_F_contig11668.1474.1 vs. uniprot
Match: A0A7S4RDK4_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RDK4_9STRA) HSP 1 Score: 156 bits (395), Expect = 6.010e-41 Identity = 72/173 (41.62%), Postives = 116/173 (67.05%), Query Frame = 1
Query: 1 DDDAAMAASQVIEAVSTVLQSTRAVPELFPAMESHLLPMLAQIFSEDGDLMEYIENACDVLSFLTYYGPGISQQLWSVFPMLYRTWDKWAFDLISNLAVPIDNYVSRGTDVFVEGR--TPEG-ARYVEMLLDMCQRVLKDPRQTEKEARTAAQLLMVVLHNCKGRIDEYVPSM 510
DDDAAMAA+Q +E ++TVL+ PEL+ ME L+P++ QI DG+ +EY+E A D+L+FLTY+ IS +LW FP++Y +D+WAFD ++ + P++N++ + F+ G TPEG +Y+E++ + + + + R +E E+R A L M +LHNC+G++D Y+P M
Sbjct: 674 DDDAAMAAAQCLECIATVLKGICERPELYRTMEPQLIPLVLQILGNDGEYIEYLEYALDILTFLTYFPDHISPELWQAFPLIYIAFDQWAFDYLNLMVPPLENFIGKAPQQFLAGTASTPEGEVKYIELVFSIVAKTVAEERSSESESRKALSLYMSILHNCRGQVDLYLPMM 846
BLAST of mRNA_H-canaliculatus_F_contig11668.1474.1 vs. uniprot
Match: A0A7S4MVL2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MVL2_9STRA) HSP 1 Score: 152 bits (385), Expect = 1.280e-39 Identity = 72/174 (41.38%), Postives = 114/174 (65.52%), Query Frame = 1
Query: 1 DDDAAMAASQVIEAVSTVLQSTRAVPELFPAMESHLLPMLAQIFSEDGDLMEYIENACDVLSFLTYYGPGISQQLWSVFPMLYRTWDKWAFDLISNLAVPIDNYVSRGTDVFVEGR--TPEGAR--YVEMLLDMCQRVLKDPRQTEKEARTAAQLLMVVLHNCKGRIDEYVPSM 510
DDDAA+AA+Q +E V+TVL+ PEL+ +ME L+P+ QI DG+ +EY+E A D+L+FLTY+ IS +LW FP++Y +D+WAFD ++ + P++N++ + F++G TP+G Y++++ M + + + R +E E R A L M VLHNC+G +D Y+P M
Sbjct: 666 DDDAALAAAQCLECVATVLKGICERPELYKSMEPQLVPLCLQILGNDGEYIEYLEYALDILTFLTYFPEEISPRLWEAFPLIYVAFDQWAFDYLNLMVPPLENFIGKSPTQFLQGTATTPDGTSVSYIDLVFSMVAKTVAEERSSEPECRKALSLYMSVLHNCRGLVDAYLPMM 839
BLAST of mRNA_H-canaliculatus_F_contig11668.1474.1 vs. uniprot
Match: A0A7S1VG73_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VG73_9STRA) HSP 1 Score: 149 bits (375), Expect = 1.380e-38 Identity = 70/185 (37.84%), Postives = 122/185 (65.95%), Query Frame = 1
Query: 1 DDDAAMAASQVIEAVSTVLQSTRAVPELFPAMESHLLPMLAQIFSEDGDLMEYIENACDVLSFLTYYGPGISQQLWSVFPMLYRTWDKWAFDLISNLAVPIDNYVSRGTDVFVEGRT--PEG-ARYVEMLLDMCQRVLKDPRQTEKEARTAAQLLMVVLHNCKGRIDEYVPSM----LGMLSERV 534
DDDAAMAA+Q +E ++TVL+ PEL+ ++E L+P++ I DG+ +EY+E A D+L+FLTY+ I+ +LW FP++Y+ +D+WA+D +S + P+ +++++ ++F+ G+ PEG + Y++M+ M + + + R TE E R A L M +LH+C G+ID +P + LG L +++
Sbjct: 227 DDDAAMAAAQCLECIATVLKGICEKPELYKSLEPTLIPLILTILGNDGNFIEYLECALDILTFLTYFPEEITPELWQAFPLIYQAFDQWAYDYLSLMVPPLQSFIAKNPNIFLTGQANLPEGPSTYIDMVFQMVAKTVANDRSTESEVRQALTLFMSILHSCPGQIDPLLPVINELVLGKLGQQI 411
BLAST of mRNA_H-canaliculatus_F_contig11668.1474.1 vs. uniprot
Match: L8GGA7_ACACA (Importin beta domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GGA7_ACACA) HSP 1 Score: 149 bits (375), Expect = 2.900e-38 Identity = 72/178 (40.45%), Postives = 118/178 (66.29%), Query Frame = 1
Query: 1 DDDAAMAASQVIEAVSTVLQSTRAVPELFPAMESHLLPMLAQIFSEDGDLMEYIENACDVLSFLTYYGPGISQQLWSVFPMLYRTWDKWAFDLISNLAVPIDNYVSRGTDVFVEGRTPEGARYVEMLLDMCQRVLKDPRQTEKEARTAAQLLMVVLHNCKGRIDEYVPSMLGMLSERV 534
DD AAMAA++ + A+ T+L S P+LFP +E L+P+L ++ D D ME++E ++++LT+YG GIS +W +FP+LY+ +D WA D + + +P+DNY+SRG DVF+ P+ Y++M+L M Q+++ D + +A A+L+ VV C+GRIDEYVP ++ + +R+
Sbjct: 587 DDAAAMAATECLGAIETILDSITKTPDLFPQVEPLLVPLLVRLL--DDDAMEFMEETLKIMAYLTFYGRGISPAMWQLFPLLYKAFDGWATDWMDQIIIPLDNYISRGNDVFLAN--PD---YLKMVLSMYQKLIGDTGVADVDAGEGAKLIEVVFQQCRGRIDEYVPGIIELAVKRL 757
BLAST of mRNA_H-canaliculatus_F_contig11668.1474.1 vs. uniprot
Match: A0A7S3LFB3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LFB3_9STRA) HSP 1 Score: 144 bits (364), Expect = 1.160e-37 Identity = 69/171 (40.35%), Postives = 112/171 (65.50%), Query Frame = 1
Query: 1 DDDAAMAASQVIEAVSTVLQSTRAVPELFPAMESHLLPMLAQIFSEDGDLMEYIENACDVLSFLTYYGPGISQQLWSVFPMLYRTWDKWAFDLISNLAVPIDNYVSRGTDVFVEG--RTPEGA-RYVEMLLDMCQRVLKDPRQTEKEARTAAQLLMVVLHNCKGRIDEYVP 504
DDDAA+AA+Q +E ++TVL+ + +E LLP++ +I DGD +EY+E+A D+LSFLTY+ IS ++W FP++Y +D+WA+D ++ + I +Y+S+G DVF+ G PEG Y+++++ M + L + R +E E R A L M +L++C GRI+ Y+P
Sbjct: 97 DDDAALAAAQCLECIATVLKGVCGKESMIRVLEPMLLPLVLKILGNDGDFIEYLESALDILSFLTYFQSQISMEVWQCFPLIYMAFDQWAYDYLNMMVPCIQSYISKGPDVFLAGVAHLPEGQISYLDLVVSMVTKTLTNDRASEVECRFALSLFMTILNHCPGRINPYLP 267
BLAST of mRNA_H-canaliculatus_F_contig11668.1474.1 vs. uniprot
Match: D8LU38_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU38_ECTSI) HSP 1 Score: 131 bits (330), Expect = 1.160e-36 Identity = 59/70 (84.29%), Postives = 65/70 (92.86%), Query Frame = 1
Query: 151 MEYIENACDVLSFLTYYGPGISQQLWSVFPMLYRTWDKWAFDLISNLAVPIDNYVSRGTDVFVEGRTPEG 360
MEYI+NA DVL FLTYYG GIS+QLWSVFPMLYRTWDKWAFDLISN+AVPIDNY+SRGTDVF+ GR+ EG
Sbjct: 1 MEYIQNAWDVLRFLTYYGAGISEQLWSVFPMLYRTWDKWAFDLISNMAVPIDNYISRGTDVFIAGRSAEG 70 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11668.1474.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig11668.1474.1 >prot_H-canaliculatus_F_contig11668.1474.1 ID=prot_H-canaliculatus_F_contig11668.1474.1|Name=mRNA_H-canaliculatus_F_contig11668.1474.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=173bp MAASQVIEAVSTVLQSTRAVPELFPAMESHLLPMLAQIFSEDGDLMEYIEback to top mRNA from alignment at H-canaliculatus_F_contig11668:1869..3486- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig11668.1474.1 ID=mRNA_H-canaliculatus_F_contig11668.1474.1|Name=mRNA_H-canaliculatus_F_contig11668.1474.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1618bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11668:1869..3486- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11668:1869..3486- >mRNA_H-canaliculatus_F_contig11668.1474.1 ID=mRNA_H-canaliculatus_F_contig11668.1474.1|Name=mRNA_H-canaliculatus_F_contig11668.1474.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1038bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11668:1869..3486- (Hapterophycus canaliculatus Oshoro5f female)back to top |