mRNA_H-canaliculatus_F_contig1166.1465.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1166.1465.1 vs. uniprot
Match: D8LK74_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK74_ECTSI) HSP 1 Score: 289 bits (740), Expect = 5.980e-83 Identity = 131/148 (88.51%), Postives = 138/148 (93.24%), Query Frame = 2
Query: 1880 PLPLS-QMDYWVRTPRCKAAKSKHIDFIDDVAYSREQFIEETVFTCPFTGVRRDKVLERNMFPYDVPTDVEHWTLWSREDLDDDQMEAFVREWAAENHPHVVEWECDNNEGERSIDWFHVHVFFRVGCEDRTGVPRDPASVYDGPVGS 2320
P+P + QMDYWVRTP CKAAKSKHIDFIDDVAYSREQFIEETVFTCPFTG RR VLERNMFPYDVPTDVEHWTLWSR+DL +D+MEAFV+ WAAENHPH VEWECDNNEGERSIDWFHVHVFFR+GCEDRTGVPRDPASVYDGP GS
Sbjct: 308 PIPRTLQMDYWVRTPNCKAAKSKHIDFIDDVAYSREQFIEETVFTCPFTGARRAIVLERNMFPYDVPTDVEHWTLWSRKDLPNDEMEAFVQGWAAENHPHAVEWECDNNEGERSIDWFHVHVFFRLGCEDRTGVPRDPASVYDGPCGS 455
BLAST of mRNA_H-canaliculatus_F_contig1166.1465.1 vs. uniprot
Match: A0A6H5KVR4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVR4_9PHAE) HSP 1 Score: 287 bits (735), Expect = 2.590e-82 Identity = 130/148 (87.84%), Postives = 136/148 (91.89%), Query Frame = 2
Query: 1880 PLPLS-QMDYWVRTPRCKAAKSKHIDFIDDVAYSREQFIEETVFTCPFTGVRRDKVLERNMFPYDVPTDVEHWTLWSREDLDDDQMEAFVREWAAENHPHVVEWECDNNEGERSIDWFHVHVFFRVGCEDRTGVPRDPASVYDGPVGS 2320
P+P + M+YWVRTP CKAAKSKHIDFIDDVAYSREQFIEETVFTCPFTG RRD VLERNMFPYDVPTDVEHWTLWSR DL D+MEAFV+ WAAENHPH VEWECDNNEGERSIDWFHVHVFFR+GCEDRTGVPRDPASVYDGP GS
Sbjct: 303 PIPRTLPMEYWVRTPNCKAAKSKHIDFIDDVAYSREQFIEETVFTCPFTGARRDIVLERNMFPYDVPTDVEHWTLWSRRDLPKDEMEAFVQGWAAENHPHAVEWECDNNEGERSIDWFHVHVFFRLGCEDRTGVPRDPASVYDGPCGS 450
BLAST of mRNA_H-canaliculatus_F_contig1166.1465.1 vs. uniprot
Match: A0A836CLJ2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLJ2_9STRA) HSP 1 Score: 156 bits (395), Expect = 2.180e-38 Identity = 69/118 (58.47%), Postives = 85/118 (72.03%), Query Frame = 2
Query: 1898 MDYWVRTPRCKAAKSKHIDFIDDVAYSREQFIEETVFTCPFTGVRRDKVLERNMFPYDVPTDVEHWTLWSREDLDDDQMEAFVREWAAENHPHVVEWECDNNEGERSIDWFHVHVFFR 2251
M++WVR CK K++H+DFID SREQFIE+TVFT P TG RD VLE NMFPY P DVEHWTLWSR D+ ++++A+V EW N PHV W D+N G+RSI WFHVHV+ +
Sbjct: 133 MEFWVRGEECKRLKTEHLDFIDSHYSSREQFIEDTVFTDPMTGEVRDTVLEPNMFPYQTPPDVEHWTLWSRSDMTHEEIQAWVTEWLMVNKPHVRRWNYDDNAGDRSIYWFHVHVYIQ 250
BLAST of mRNA_H-canaliculatus_F_contig1166.1465.1 vs. uniprot
Match: K3X7P6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7P6_GLOUD) HSP 1 Score: 119 bits (298), Expect = 1.130e-27 Identity = 59/126 (46.83%), Postives = 75/126 (59.52%), Query Frame = 2
Query: 1898 MDYWVRTPRCKAAKSKHIDFIDDVAYSREQFIEETVFTCPFTGVRRDK--VLERNMFPYDVPTDVEHWTLWSREDLDDDQMEAFVREWAAENHPHVVEWECDNNEGERSIDWFHVHVFFRVGCEDR 2269
+DYW R+ C K H+D ID+V+ SRE+ I T RD+ +LE NMFPY P +EHWTLWSR ++ D ++EA+V W EN PHV W D N RSID FHVHV+F+V R
Sbjct: 8 IDYWDRSEECLERKWDHMDMIDEVSPSREEHILSTTL--------RDEHIILEPNMFPYTTPDGIEHWTLWSRNEMGDQEVEAYVSSWITENAPHVKSWNFDENSS-RSIDLFHVHVYFQVEAGQR 124
BLAST of mRNA_H-canaliculatus_F_contig1166.1465.1 vs. uniprot
Match: A0A6U1PGM4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1PGM4_9STRA) HSP 1 Score: 121 bits (303), Expect = 1.960e-27 Identity = 59/126 (46.83%), Postives = 81/126 (64.29%), Query Frame = 2
Query: 1877 PPLPLSQMDYWVRTPRCKAAKSKHIDFIDDVAYSREQFIEETVFTCPFTGVRRDKVLERNMFPYDVPTDVEHWTLWSREDLDDDQMEAFVREWAAENHPHVVEWECDNNEGERSIDWFHVHVFFRV 2254
PP L+ ++YW RT C K H+DFID SRE FI ET + RD +LE NMFPYD P D+ HWT+W R ++ ++++ +V W + +P++VEW D+N GERSID +HVHV+FRV
Sbjct: 63 PPRTLT-IEYWDRTDDCINKKWDHMDFIDANFDSRENFILETAL------LNRDHMLEPNMFPYDTPEDILHWTMWCRWEMSEEELIKYVENWM-KKYPYIVEWNYDDNAGERSIDLYHVHVYFRV 180
BLAST of mRNA_H-canaliculatus_F_contig1166.1465.1 vs. uniprot
Match: A0A5D6YDG9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YDG9_9STRA) HSP 1 Score: 116 bits (291), Expect = 1.230e-26 Identity = 58/124 (46.77%), Postives = 73/124 (58.87%), Query Frame = 2
Query: 1898 MDYWVRTPRCKAAKSKHIDFIDDVAYSREQFIEETVFTCPFTGVRRDKVLERNMFPYDVPTDVEHWTLWSREDLDDDQMEAFVREWAAENHPHVVEWECDNNEGERSIDWFHVHVFFRVGCEDR 2269
++YW R+ C K H+D IDD SRE+ I T T +LE NMFPY P +EHWTLWSR++L D+++E V W AE PHV+ W D+N RSID FHVHV+FRV R
Sbjct: 17 IEYWSRSDECLERKWDHLDKIDDSGLSREEHILATTLKGSRT------LLEPNMFPYSTPAGIEHWTLWSRDELSDEEVERCVGIWIAEKAPHVLSWNFDDNPA-RSIDLFHVHVYFRVAVGQR 133
BLAST of mRNA_H-canaliculatus_F_contig1166.1465.1 vs. uniprot
Match: A0A6A3KAU7_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3KAU7_9STRA) HSP 1 Score: 115 bits (288), Expect = 1.090e-25 Identity = 63/163 (38.65%), Postives = 86/163 (52.76%), Query Frame = 2
Query: 1835 SRRSLPSFLFVDL-----CPPLPLSQM--DYWVRTPRCKAAKSKHIDFIDDVAYSREQFIEETVFTCPFTGVRRDKVLERNMFPYDVPTDVEHWTLWSREDLDDDQMEAFVREWAAENHPHVVEWECDNNEGERSIDWFHVHVFFRVGCEDRTGVPRDPASVY 2302
++RS P++ +L C P + YW RT C K H+D +DD+ SRE+ I T + T LE NMFPYD P +EHWTLWSR ++D+ ++E +V +W EN PHV W D N RSID FHVHV+ + P P+ +Y
Sbjct: 35 TKRSQPAYTDTELVQEQGCANTPTRTLALQYWDRTDECLERKWAHMDMVDDLFESREELILATTLSHTETA------LEPNMFPYDTPDGIEHWTLWSRHEMDNAEIEEYVCDWLRENAPHVERWNYDENLS-RSIDIFHVHVYLQA--------PAQPSFLY 182
BLAST of mRNA_H-canaliculatus_F_contig1166.1465.1 vs. uniprot
Match: A0A662XF23_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XF23_9STRA) HSP 1 Score: 112 bits (279), Expect = 1.750e-24 Identity = 58/126 (46.03%), Postives = 72/126 (57.14%), Query Frame = 2
Query: 1877 PPLPLSQMDYWVRTPRCKAAKSKHIDFIDDVAYSREQFIEETVFTCPFTGVRRDKVLERNMFPYDVPTDVEHWTLWSREDLDDDQMEAFVREWAAENHPHVVEWECDNNEGERSIDWFHVHVFFRV 2254
PP L +++YW RT C K H+D +D V SRE I + T VLE NMFPYD +EHWTLWSR++LDD +E ++ W EN PHV W D RSID FHVHV+F+V
Sbjct: 30 PPRAL-EIEYWGRTDECLERKWAHMDMVDKVFKSRETCILSAMLKGAHT------VLELNMFPYDTREGIEHWTLWSRDELDDSAIEKYICSWLRENAPHVESWNFDEKLA-RSIDIFHVHVYFKV 147
BLAST of mRNA_H-canaliculatus_F_contig1166.1465.1 vs. uniprot
Match: A0A2D4C5Q1_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C5Q1_PYTIN) HSP 1 Score: 109 bits (272), Expect = 8.660e-24 Identity = 55/119 (46.22%), Postives = 70/119 (58.82%), Query Frame = 2
Query: 1898 MDYWVRTPRCKAAKSKHIDFIDDVAYSREQFIEETVFTCPFTGVRRDKVLERNMFPYDVPTDVEHWTLWSREDLDDDQMEAFVREWAAENHPHVVEWECDNNEGERSIDWFHVHVFFRV 2254
++YW RT CK K H+D I D S E E +F G R LE NMFPYD P +EHWTLW +L+ +Q++ +V W N PHV+ W D+N ERSID FHVHV+F+V
Sbjct: 32 IEYWSRTDECKERKWDHLDDIADKYGSAE----EHIFATTLNG--RTAFLEPNMFPYDTPAGIEHWTLWHVNELNHEQIKQYVENWIDANAPHVLRWNYDDNP-ERSIDIFHVHVYFQV 143
BLAST of mRNA_H-canaliculatus_F_contig1166.1465.1 vs. uniprot
Match: A0A1V9Z505_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z505_9STRA) HSP 1 Score: 112 bits (279), Expect = 1.830e-23 Identity = 52/123 (42.28%), Postives = 72/123 (58.54%), Query Frame = 2
Query: 1895 QMDYWVRTPRCKAAKSKHIDFIDDVAYSREQFIEETVFTCPFTGVRRDKVLERNMFPYDVPTDVEHWTLWSREDLDDDQMEAFVREWAAENHPHVVEWECDNNEGERSIDWFHVHVFFRVGCE 2263
+++YW R+ CK K H+D +D R + EE ++ G R +E NMFPY+ P +EHWTLWSR +L ++ +V W + N PHV W D+N ERSID FHVHV+ +VG E
Sbjct: 145 KLEYWTRSDECKERKWDHLDQLDSEETGRSR--EEHIYATTLAG--RTSYMEPNMFPYETPAGIEHWTLWSRHELRHVHVQEYVERWISTNAPHVTAWNYDDNP-ERSIDIFHVHVYLQVGAE 262 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1166.1465.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1166.1465.1 >prot_H-canaliculatus_F_contig1166.1465.1 ID=prot_H-canaliculatus_F_contig1166.1465.1|Name=mRNA_H-canaliculatus_F_contig1166.1465.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=230bp MDYWVRTPRCKAAKSKHIDFIDDVAYSREQFIEETVFTCPFTGVRRDKVLback to top mRNA from alignment at H-canaliculatus_F_contig1166:5043..9625+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1166.1465.1 ID=mRNA_H-canaliculatus_F_contig1166.1465.1|Name=mRNA_H-canaliculatus_F_contig1166.1465.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=4583bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1166:5043..9625+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1166:5043..9625+ >mRNA_H-canaliculatus_F_contig1166.1465.1 ID=mRNA_H-canaliculatus_F_contig1166.1465.1|Name=mRNA_H-canaliculatus_F_contig1166.1465.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1380bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1166:5043..9625+ (Hapterophycus canaliculatus Oshoro5f female)back to top |