mRNA_H-canaliculatus_F_contig11652.1459.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig11652.1459.1 vs. uniprot
Match: D7G1Y7_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1Y7_ECTSI) HSP 1 Score: 62.0 bits (149), Expect = 2.930e-9 Identity = 31/56 (55.36%), Postives = 40/56 (71.43%), Query Frame = 1
Query: 7 LHTAASQGLTDQTLALLAAGSIDIDSGTSLGRTPLMCAARHGHSHVVKILLDYGAN 174
LH AA G D+T ALL++G++D++ G G TPLM A+ G SH+VKILLD GAN
Sbjct: 13 LHEAAHFGSADRTRALLSSGAVDVNQGDPAGFTPLMLASMEGQSHIVKILLDNGAN 68
BLAST of mRNA_H-canaliculatus_F_contig11652.1459.1 vs. uniprot
Match: A0A093ZJC4_9PEZI (Helo_like_N domain-containing protein n=2 Tax=unclassified Pseudogymnoascus TaxID=2637121 RepID=A0A093ZJC4_9PEZI) HSP 1 Score: 60.1 bits (144), Expect = 2.800e-8 Identity = 34/71 (47.89%), Postives = 47/71 (66.20%), Query Frame = 1
Query: 1 TNLHTAASQGLTDQTLALLAAGSIDIDSGTSLGRTPLMCAARHGHSHVVKILLDYGANVYITNGLEGTALH 213
T+LH A+ GL + LL ++ ID+ T +G TPL+ AA GH+ +V++LL GAN Y+TN L GTALH
Sbjct: 662 TSLHAASHFGLENTLRKLLDEDTLPIDAKTKMGSTPLIKAASRGHASLVRMLLQKGANKYLTN-LYGTALH 731
BLAST of mRNA_H-canaliculatus_F_contig11652.1459.1 vs. uniprot
Match: UPI001923AC8E (26S proteasome non-ATPase regulatory subunit 10-like isoform X3 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=UPI001923AC8E) HSP 1 Score: 55.5 bits (132), Expect = 1.060e-6 Identity = 31/69 (44.93%), Postives = 41/69 (59.42%), Query Frame = 1
Query: 7 LHTAASQGLTDQTLALLAAGSIDIDSGTSLGRTPLMCAARHGHSHVVKILLDYGANVYITNGLEGTALH 213
+H AA +G T+ LL +D+D+G G TPL+ AAR GH+ K LL+ GAN I + L TALH
Sbjct: 59 IHFAAREGKTEVCRFLLEELKLDVDTGDEDGETPLLHAARQGHTLTAKYLLERGANPSIPSDLGATALH 127
BLAST of mRNA_H-canaliculatus_F_contig11652.1459.1 vs. uniprot
Match: A0A6A3D1U5_HIBSY (Putative WD-repeat protein n=4 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3D1U5_HIBSY) HSP 1 Score: 55.5 bits (132), Expect = 1.080e-6 Identity = 31/69 (44.93%), Postives = 41/69 (59.42%), Query Frame = 1
Query: 7 LHTAASQGLTDQTLALLAAGSIDIDSGTSLGRTPLMCAARHGHSHVVKILLDYGANVYITNGLEGTALH 213
+H AA +G T+ LL +D+D+G G TPL+ AAR GH+ K LL+ GAN I + L TALH
Sbjct: 59 IHFAAREGKTEVCRFLLEELKLDVDTGDEDGETPLLHAARQGHTLTAKYLLERGANPSIPSDLGATALH 127
BLAST of mRNA_H-canaliculatus_F_contig11652.1459.1 vs. uniprot
Match: A0A2P5BBF9_PARAD (N-terminal acetyltransferase A, auxiliary subunit n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5BBF9_PARAD) HSP 1 Score: 52.8 bits (125), Expect = 9.750e-6 Identity = 30/69 (43.48%), Postives = 41/69 (59.42%), Query Frame = 1
Query: 7 LHTAASQGLTDQTLALLAAGSIDIDSGTSLGRTPLMCAARHGHSHVVKILLDYGANVYITNGLEGTALH 213
LH AA +G T+ LL +D+D+ G TPL+ AAR GH+ K LL++GA+ I + L TALH
Sbjct: 60 LHFAAREGKTEVCNYLLEELKLDVDTVDEDGETPLIHAARQGHTVTAKFLLEHGADPSIASNLGATALH 128
BLAST of mRNA_H-canaliculatus_F_contig11652.1459.1 vs. uniprot
Match: A0A0F3M9K2_ORITS (Ankyrin repeat family protein n=1 Tax=Orientia tsutsugamushi str. Gilliam TaxID=1359184 RepID=A0A0F3M9K2_ORITS) HSP 1 Score: 50.1 bits (118), Expect = 9.960e-6 Identity = 29/71 (40.85%), Postives = 41/71 (57.75%), Query Frame = 1
Query: 1 TNLHTAASQGLTDQTLALLAAGSIDIDSGTSLGRTPLMCAARHGHSHVVKILLDYGANVYITNGLEGTALH 213
T+LH AA QG ++ L+ +ID++ TPL CAA+ GH+ VVK LL +GA+ + TALH
Sbjct: 4 TDLHDAAKQGDINKVKHLILKENIDVNFQDEDKNTPLYCAAKEGHTDVVKWLLTHGADSSLQCQFTNTALH 74
BLAST of mRNA_H-canaliculatus_F_contig11652.1459.1 vs. uniprot
Match: A0A6A2YXY5_HIBSY (PRA1 family protein E-like n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2YXY5_HIBSY) HSP 1 Score: 52.0 bits (123), Expect = 1.810e-5 Identity = 29/69 (42.03%), Postives = 41/69 (59.42%), Query Frame = 1
Query: 7 LHTAASQGLTDQTLALLAAGSIDIDSGTSLGRTPLMCAARHGHSHVVKILLDYGANVYITNGLEGTALH 213
+H AA +G T+ LL ++D+D+ G TPL+ AAR GH+ K +L+ GAN I + L TALH
Sbjct: 59 IHFAAREGKTEVCKFLLEELNLDVDTRDEDGETPLLHAARQGHTLTAKYILECGANPTIPSDLGATALH 127
BLAST of mRNA_H-canaliculatus_F_contig11652.1459.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE) HSP 1 Score: 52.0 bits (123), Expect = 1.810e-5 Identity = 27/61 (44.26%), Postives = 39/61 (63.93%), Query Frame = 1
Query: 7 LHTAASQGLTDQTLALLAAGSIDIDSGTSLGRTPLMCAARHGHSHVVKILLDYGANVYITN 189
L AA G LLA+G+ DID G +G TPLM A+R G+ +V++LL+ GA V++T+
Sbjct: 18 LQAAADCGSFKTAANLLASGAFDIDQGNEVGWTPLMMASRGGYPRIVRMLLNKGAQVWVTD 78
BLAST of mRNA_H-canaliculatus_F_contig11652.1459.1 vs. uniprot
Match: D8LB07_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB07_ECTSI) HSP 1 Score: 51.2 bits (121), Expect = 2.130e-5 Identity = 29/63 (46.03%), Postives = 42/63 (66.67%), Query Frame = 1
Query: 4 NLHTAASQGLTDQTLALLAAGSIDIDSGT-SLGRTPLMCAARHGHSHVVKILLDYGANVYITN 189
+LH A +G T++ +ALL++ ++D G S+G TPLM A G+ +VKILLD G N+ ITN
Sbjct: 21 DLHKAVERGDTERAVALLSSKKFNVDEGGGSMGVTPLMIAIFKGNLRMVKILLDEGCNLSITN 83
BLAST of mRNA_H-canaliculatus_F_contig11652.1459.1 vs. uniprot
Match: A0A366S5T6_9HYPO (NACHT domain-containing protein n=1 Tax=Fusarium coffeatum TaxID=231269 RepID=A0A366S5T6_9HYPO) HSP 1 Score: 51.6 bits (122), Expect = 2.600e-5 Identity = 30/71 (42.25%), Postives = 41/71 (57.75%), Query Frame = 1
Query: 1 TNLHTAASQGLTDQTLALLAAGSIDIDSGTSLGRTPLMCAARHGHSHVVKILLDYGANVYITNGLEGTALH 213
T LH ++ GL LL G D++ T +G TP++ AA GH VK+LL+ GAN Y++N G ALH
Sbjct: 524 TPLHHSSRHGLEHAVATLLGNGMQDVNELTRMGSTPIIMAAGTGHVPTVKLLLERGANPYLSNWY-GNALH 593 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11652.1459.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig11652.1459.1 >prot_H-canaliculatus_F_contig11652.1459.1 ID=prot_H-canaliculatus_F_contig11652.1459.1|Name=mRNA_H-canaliculatus_F_contig11652.1459.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=106bp TNLHTAASQGLTDQTLALLAAGSIDIDSGTSLGRTPLMCAARHGHSHVVKback to top mRNA from alignment at H-canaliculatus_F_contig11652:1584..1901- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig11652.1459.1 ID=mRNA_H-canaliculatus_F_contig11652.1459.1|Name=mRNA_H-canaliculatus_F_contig11652.1459.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=318bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11652:1584..1901- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11652:1584..1901- >mRNA_H-canaliculatus_F_contig11652.1459.1 ID=mRNA_H-canaliculatus_F_contig11652.1459.1|Name=mRNA_H-canaliculatus_F_contig11652.1459.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=636bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11652:1584..1901- (Hapterophycus canaliculatus Oshoro5f female)back to top |