mRNA_H-canaliculatus_F_contig1165.1455.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
|
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1165.1455.1 vs. uniprot
Match: D7FWI0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWI0_ECTSI) HSP 1 Score: 582 bits (1499), Expect = 2.670e-201 Identity = 332/501 (66.27%), Postives = 367/501 (73.25%), Query Frame = 1
Query: 1 AGEWEDDITRALLWRLLLGVLPRTAPPSAWATEMANKRKEYRRLKADHRVDIAKVLDTTDPMSANPLFSGSGSGDDPWSHFYERKEMTETIKADLERLFPTGCGDHFLAPARQELLLSVLSLWADLNTATSYRQLYGMKWARLMFGREFRVEAVMLLWDHIFASSWIEGRPDMPECIENVAVAMVVSIRDQLLQEDCTGCLQLLMRYPPDQSAKAVISQALSASSG-------RSSQPSSSPAYAAAALGPRAADATXXXXXXXASFARQAESSPPWLNRSGRDAGGTPGGGHRGLPAPRRGGGVDHG-SERRRDGSDAGLAQDGRGFSGGDXXXXXXQGLETEREAKTNWQQGLDDFTRRALSAAQGVAKMAVQTVERTQGGGGARQAGXXGMGQRPGVPATEALSHARRLRAACAAMEAGETSVSLAMQEIKEVARLLEERSQGGGEAGRSTSREAEQRRAVHTNSGMGXXXXXQGVTRGFSTYSEDDGCADGLYTRDL 1479
+GEW DD +R LLWRLLLGV+PR +PPS WATEMANKR EYRRLKA+HRVDI+KVLDTTDPMSANPLFSGSGSGDDPWSHFYERKEMT+TIKADLERLFPTGCGDHFLAPARQELLLSVLS+WADLNT T+YRQLYGMKWARLMFGREFRVE V++LWDHIFASSWIEG+PD+PECIENVAVAMVVSIR QLL EDCTGCLQLLMRYPPDQ IS +LS + G RS++PSS +AAA+ G RAA ++ S Q E +P WLNR GRD G G +P G H SE RRD G G + LETEREAK NWQQGLD+FTRRA+SAAQGVAK+AVQTVERTQGGG R G GVPA+EALS +RRLR ACA ME GE VSLA QEIKEVAR+LE RS G + RE + + + MG QGVTR FSTYSEDDGCAD LYT+DL
Sbjct: 7 SGEWNDDNSRGLLWRLLLGVIPRDSPPSEWATEMANKRGEYRRLKAEHRVDISKVLDTTDPMSANPLFSGSGSGDDPWSHFYERKEMTDTIKADLERLFPTGCGDHFLAPARQELLLSVLSVWADLNTETAYRQLYGMKWARLMFGREFRVEGVLVLWDHIFASSWIEGQPDVPECIENVAVAMVVSIRHQLLAEDCTGCLQLLMRYPPDQGVSTAISLSLSLAKGQSLAAFERSTEPSS---FAAASSG-RAAPSS--------SSEIQQEPAPVWLNRGGRDHGSVSG------RSPSATGSAGHAPSEWRRD-DGGGXXVXXXXXXGRARAFGRDERLETEREAKNNWQQGLDEFTRRAMSAAQGVAKLAVQTVERTQGGGDPRHLRTAG-----GVPASEALSLSRRLRTACAKMETGEAPVSLAAQEIKEVARILEARS------GAPSVREP-----LRSTNSMGGGGGGQGVTRAFSTYSEDDGCADALYTQDL 472
BLAST of mRNA_H-canaliculatus_F_contig1165.1455.1 vs. uniprot
Match: A0A6H5KGW7_9PHAE (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGW7_9PHAE) HSP 1 Score: 503 bits (1294), Expect = 3.620e-167 Identity = 331/677 (48.89%), Postives = 366/677 (54.06%), Query Frame = 1
Query: 4 GEWEDDITRALLWRLLLGVLPRTAPPSAWATEMANKRKEYRRLKADHRVDIAKVLDTTDPMSANPLFSGSGSGDDPWSHFYERKEMTETIKADLERLFPTGCGDHFLAPARQELLLSVLSLWADLNTATSYRQ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LYGMKWARLMFGREFRVEAVMLLWDHIFASSWIEGRPDMPECIENVAVAMVVSIRDQLLQEDCTGCLQLLMRYPPDQSAKAVISQALSASSG-------RSSQPSSSPAYAAAALGPRAADATXXXXXXXASFARQAESSPPWLNRSGRDAGGTPGGGHRGLPAPRRGGGVDHGSERRRDGSDAGLAQDGRGFSGGDXXXXXXQGLETEREAKTNWQQGLDDFTRRALSAAQGVAKMAVQTVERTQGGGGARQAGXXGMGQRPGVPATEALSHARRLRAACAAMEAGETSVSLAMQEIKEVARLLEERSQGGGEAGRSTSREAEQRRAVHTNSGMGXXXXXQGVTRGFSTYSEDDGCADGLYTRDL 1479
GEW DD +R LLWRLLLGV+PR +PPS WATEMANKR EYRRLKA+HRVDI+KVLDTTDPMSANPLFSGSGSGDDPWSHFYERKEMT+TIKADLERLFPTGCGDHFLAPARQELLLSVLS+WADLNT T+YRQ LYGMKWARLMFGREFRVE V++LWDHIFASSWIEG+PD+PECIENVAVAMVVSIR QLL EDCTGCLQLLMRYPPDQ IS +LS + G RS++PSS ++AA+ G RAA ++ S Q E +P WLNR GR G G R A R G SE RRD G G + LETEREAK NWQQGLD+FTRRA+SAAQGVAK+AVQTVERTQGGG R G GVPA+EALS +RRLR ACA +E GET VSLA QEIKEVAR+LE RS G + RE + + + MG QGVTR FSTYSEDDGCAD LYT+DL
Sbjct: 48 GEWNDDNSRGLLWRLLLGVVPRDSPPSEWATEMANKRGEYRRLKAEHRVDISKVLDTTDPMSANPLFSGSGSGDDPWSHFYERKEMTDTIKADLERLFPTGCGDHFLAPARQELLLSVLSVWADLNTGTAYRQGMHEVLAPLILVLEKEVAAATRAEAIAGDSTXXXXXXXXXXXXXXXXXXXXXXXXXXVKASPWVGKSIVNGEPLNAGTHPAFAAILGHGSTPEDLEADAFWLFSAVMSGLERFYEHGEKATSTSALGAGRGGGEGGSVDSPVVEMCKRLQGVRMRAADPELQQHLSHLDISPQAGYLKLYGMKWARLMFGREFRVEGVLVLWDHIFASSWIEGQPDVPECIENVAVAMVVSIRHQLLAEDCTGCLQLLMRYPPDQDVSTAISLSLSLAKGQSLAAFERSTEPSS---FSAASSG-RAAPSS--------SSEIQQEPAPVWLNRGGRGHGIISG---RSPSATGRAGHAP--SEWRRD-DGGGXXVXXXXXXGRARAFGRDERLETEREAKNNWQQGLDEFTRRAMSAAQGVAKLAVQTVERTQGGGDPRHLRTAG-----GVPASEALSLSRRLRTACAKLETGETPVSLAAQEIKEVARILEARS------GAPSVREP-----LRSTNSMGSGGGGQGVTRAFSTYSEDDGCADALYTQDL 690
BLAST of mRNA_H-canaliculatus_F_contig1165.1455.1 vs. uniprot
Match: A0A8C1SB86_CYPCA (TBC1 domain family, member 5 n=2 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1SB86_CYPCA) HSP 1 Score: 91.7 bits (226), Expect = 1.400e-15 Identity = 73/265 (27.55%), Postives = 115/265 (43.40%), Query Frame = 1
Query: 4 GEWEDDITRALLWRLLLGVLPRTAPPSAWATEMANKRKEYRRLKADHRVDIAKVLDTTDPMSANPLFSGSGSGDDPWSHFYERKEMTETIKADLERLFP-----------TGCGDHFLAPARQ-----------ELLLSVL---SLW--ADLNTATSYRQL------------------YGMKWARLMFGREFRVEAVMLLWDHIFASSWIEGRPDMPECIENVAVAMVVSIRDQLLQEDCTGCLQLLMRYPPDQSAKAVISQAL 663
G R++ W+L L VLP + W + R++Y ++K H + K D + NPL GS W+ F++ KE+ IK D+ R FP T D AR+ ELL ++ LW + LN + + G +W RL+FGREF ++ ++++WD +FA S + ++ V VAM++ IRD L+ + CL LLM YPP +++ +AL
Sbjct: 57 GRLRSSRFRSVCWKLYLDVLPEDK--TQWISRTKEHREQYEKIKETHITNPRKAAGQQDLVVNNPLSQDEGS---LWNKFFQDKELRSMIKQDVLRTFPEMVFFQEEDVRTKLTDILFCYARENEQLLYKQGMHELLAPIVFVXDLWHVSMLNNKCFFFSINLSFFPIIYEFSIFFCVFVGSRWVRLLFGREFPLQDLLVVWDALFADSITL------DLVDYVFVAMLLYIRDALIASNFQTCLGLLMHYPPIGDIHSLLLKAL 310
BLAST of mRNA_H-canaliculatus_F_contig1165.1455.1 vs. uniprot
Match: A0A8C3ID99_CHRPI (TBC1 domain family member 5 n=2 Tax=Durocryptodira TaxID=1579337 RepID=A0A8C3ID99_CHRPI) HSP 1 Score: 91.7 bits (226), Expect = 1.580e-15 Identity = 71/274 (25.91%), Postives = 116/274 (42.34%), Query Frame = 1
Query: 4 GEWEDDITRALLWRLLLGVLPRTAPPSAWATEMANKRKEYRRLKADHRVDIAKVLDTTDPMSANPLFSGSGSGDDPWSHFYERKEMTETIKADLERLFPTGCGDHFLAPARQELLLSVLSLWADLNTATSYRQ------------------------------------------------------LYGMKWARLMFGREFRVEAVMLLWDHIFASSWIEGRPDMPECIENVAVAMVVSIRDQLLQEDCTGCLQLLMRYPPDQSAKAVISQAL 663
G+ R++ W+L L VLP S W + + R Y ++K H + K D + NPL GS W+ F++ KE+ I+ D+ R FP +F + +++L VL +A N Y+Q +YG++W RL+FGREF ++ ++++WD +FA S + ++ + VAM++ IRD L+ + CL LLM YPP ++I +AL
Sbjct: 79 GQLRSSRFRSVCWKLFLNVLP--PDRSQWINKTSKLRTWYNKIKEIHITNPRKA-GQQDLIINNPLSQDEGS---LWNKFFQDKELRAMIEQDVTRTFPEM--QYFQQESVRKILTDVLFCYARENEQLLYKQEKDAMMTPIPFARPQDLGPSIAIVTKVNQIQDHLLKKHDIELYMHLNRLEIAPQIYGLRWVRLLFGREFPLQDLLVVWDALFADSITL------DLVDYIFVAMLLYIRDALISSNYQTCLGLLMHYPPIGDVHSLILRAL 338
BLAST of mRNA_H-canaliculatus_F_contig1165.1455.1 vs. uniprot
Match: A0A8C1SEM8_CYPCA (TBC1 domain family, member 5 n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1SEM8_CYPCA) HSP 1 Score: 89.4 bits (220), Expect = 4.080e-15 Identity = 73/269 (27.14%), Postives = 114/269 (42.38%), Query Frame = 1
Query: 4 GEWEDDITRALLWRLLLGVLPRTAPPSAWATEMANKRKEYRRLKADHRVDIAKVLDTTDPMSANPLFSGSGSGDDPWSHFYERKEMTETIKADLERLFP-----------TGCGDHFLAPARQ-----------ELLLSVL---SLWA------DLNTATSYRQL------------------YGMKWARLMFGREFRVEAVMLLWDHIFASSWIEGRPDMPECIENVAVAMVVSIRDQLLQEDCTGCLQLLMRYPPDQSAKAVISQAL 663
G R++ W+L L VLP + W + R++Y ++K H + K D + NPL GS W+ F++ KE+ IK D+ R FP T D AR+ ELL ++ LW LN + + G +W RL+FGREF ++ ++++WD +FA S + ++ V VAM++ IRD L+ + CL LLM YPP +++ +AL
Sbjct: 71 GRLRSSRFRSVCWKLYLDVLPEDK--TQWISRTKEHREQYEKIKETHITNPRKAAGQQDLVVNNPLSQDEGS---LWNKFFQDKELRSMIKQDVLRTFPEMVFFQEEDVRTKLTDILFCYARENEQLLYKQGMHELLAPIVFVXDLWHVSIIKYRLNNKCFFFSINLSFFPIIYEFSIFFCVFVGSRWVRLLFGREFPLQDLLVVWDALFADSITL------DLVDYVFVAMLLYIRDALIASNFQTCLGLLMHYPPIGDIHSLLLKAL 328
BLAST of mRNA_H-canaliculatus_F_contig1165.1455.1 vs. uniprot
Match: A0A8H6A922_ASPBU (Rab-GAP TBC domain-containing protein n=3 Tax=Aspergillus TaxID=5052 RepID=A0A8H6A922_ASPBU) HSP 1 Score: 88.6 bits (218), Expect = 1.150e-14 Identity = 69/223 (30.94%), Postives = 104/223 (46.64%), Query Frame = 1
Query: 16 DDITRALLWR--LLLGVLPRTAPPSAWATEMANKRKEYRRLKADHRVDIAKVLDTTDPMSA--NPLFSGSGSGDDPWSHFYERKEMTETIKADLERLFPTGCGDHFLAPARQELLLSVLSLWADLNTATSYRQ----------------LYGMKWARLMFGREFRVEAVMLLWDHIFASSWIEGRPDMPECIENVAVAMVVSIRDQLLQEDCTGCLQLLMRYP 624
+D R++ W+ LL L RT W ++ R Y LKA K ++ D + + +PL S PW + ++M I D++R F PA + + VL ++A LN YRQ ++ +W RL+FGREF E V++LWD +F+ EG PE ++ V VAM++ IR QLL D + L +L+RYP
Sbjct: 38 NDGLRSICWKAFLLFDNLDRTQ----WPQRISESRSAYAALKAH----FMKYIEHPDDLQSAVDPLADDEES---PWQTLRQDEQMRADISQDVDRCLQENF--FFREPATKAKMTDVLFIYAKLNPDLGYRQDLELADHLQAQEILPQIFLTRWMRLLFGREFPFEDVLILWDFLFS----EGL--RPELVDYVCVAMLLRIRWQLLAADSSTVLTMLLRYP 241
BLAST of mRNA_H-canaliculatus_F_contig1165.1455.1 vs. uniprot
Match: A0A5N5TGS9_9CRUS (TBC1 domain family member 5 n=1 Tax=Armadillidium nasatum TaxID=96803 RepID=A0A5N5TGS9_9CRUS) HSP 1 Score: 88.2 bits (217), Expect = 1.830e-14 Identity = 56/145 (38.62%), Postives = 78/145 (53.79%), Query Frame = 1
Query: 229 PWSHFYERKEMTETIKADLERLFPTGCGDHFLAPARQELLLSVLSLWADLNTATSYRQLYGMKWARLMFGREFRVEAVMLLWDHIFASSWIEGRPDMPECIENVAVAMVVSIRDQLLQEDCTGCLQLLMRYPPDQSAKAVISQAL 663
P F +++ T K ++RL T DH + EL +A LN Q+YG++W RLMFGREF ++++WD IFA S+ IE + VAM+ I+DQLL+ D T CL LLMRYPP +++I AL
Sbjct: 311 PTQPFARPQDIGPTTKI-VQRL--TKIHDHLVKKHEPEL-------FAHLNRLEIPPQVYGIRWVRLMFGREFSFTDLLMVWDAIFADSYSNFL-----LIEYLMVAMLSYIKDQLLEADYTSCLSLLMRYPPSSDVQSIIQTAL 440
BLAST of mRNA_H-canaliculatus_F_contig1165.1455.1 vs. uniprot
Match: A0A444TDY5_ARMVU (TBC1 domain family member 5 n=1 Tax=Armadillidium vulgare TaxID=13347 RepID=A0A444TDY5_ARMVU) HSP 1 Score: 87.0 bits (214), Expect = 3.430e-14 Identity = 46/100 (46.00%), Postives = 62/100 (62.00%), Query Frame = 1
Query: 364 LWADLNTATSYRQLYGMKWARLMFGREFRVEAVMLLWDHIFASSWIEGRPDMPECIENVAVAMVVSIRDQLLQEDCTGCLQLLMRYPPDQSAKAVISQAL 663
L+A LN Q+YG++W RLMFGREF ++++WD IFA S+ IE + VAM+ I+DQLL+ D T CL LLMRYPP +++I AL
Sbjct: 394 LFAHLNRLEIPPQVYGIRWVRLMFGREFSFTDLLMVWDAIFADSYSNFL-----LIEYLMVAMLSYIKDQLLEADYTSCLSLLMRYPPSSDVQSIIQTAL 488
BLAST of mRNA_H-canaliculatus_F_contig1165.1455.1 vs. uniprot
Match: A0A2Z6QHF3_9GLOM (Rab-GAP TBC domain-containing protein n=2 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A2Z6QHF3_9GLOM) HSP 1 Score: 87.0 bits (214), Expect = 5.010e-14 Identity = 45/96 (46.88%), Postives = 61/96 (63.54%), Query Frame = 1
Query: 376 LNTATSYRQLYGMKWARLMFGREFRVEAVMLLWDHIFASSWIEGRPDMPECIENVAVAMVVSIRDQLLQEDCTGCLQLLMRYPPDQSAKAVISQAL 663
LN QLYG++W RL+FGREF ++ V+ LWD IFA P + +++V VAM++ IRD LL+ D TGCL +LMRYPP +I QA+
Sbjct: 284 LNELEIEPQLYGIRWIRLLFGREFPLDKVLTLWDGIFAED-----PTL-RIVDHVCVAMMLLIRDDLLKSDYTGCLSMLMRYPPTSDTGVLIKQAI 373
BLAST of mRNA_H-canaliculatus_F_contig1165.1455.1 vs. uniprot
Match: A0A8C9T6G3_SCLFO (TBC1 domain family member 5 n=1 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9T6G3_SCLFO) HSP 1 Score: 85.1 bits (209), Expect = 1.360e-13 Identity = 60/220 (27.27%), Postives = 94/220 (42.73%), Query Frame = 1
Query: 4 GEWEDDITRALLWRLLLGVLPRTAPPSAWATEMANKRKEYRRLKADHRVDIAKVLDTTDPMSANPLFSGSGSGDDPWSHFYERKEMTETIKADLERLFPTGCGDHFLAPARQELLLSVLSLWADLNTATSYRQLYGMKWARLMFGREFRVEAVMLLWDHIFASSWIEGRPDMPECIENVAVAMVVSIRDQLLQEDCTGCLQLLMRYPPDQSAKAVISQAL 663
G R++ W+L L LP S W + R +Y ++K H + K D + NPL GS W+ F++ KE+ IK D+ R +W RL+FGREF ++ ++++WD +FA S + ++ V VAM++ IRD L+ + CL LLM YPP A++++AL
Sbjct: 42 GRLRSSRFRSVCWKLYLDALPEDK--SQWINKTKELRAQYEKIKETHITNPRKAAGQQDLVVNNPLSQDEGS---LWNKFFQDKELRGMIKQDVLRT----------------------------------------RWVRLLFGREFPLQDLLVVWDALFADSITL------DLVDYVFVAMLLYIRDALIASNFQTCLGLLMHYPPIGDIHALLNKAL 210 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1165.1455.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1165.1455.1 >prot_H-canaliculatus_F_contig1165.1455.1 ID=prot_H-canaliculatus_F_contig1165.1455.1|Name=mRNA_H-canaliculatus_F_contig1165.1455.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=461bp MANKRKEYRRLKADHRVDIAKVLDTTDPMSANPLFSGSGSGDDPWSHFYEback to top mRNA from alignment at H-canaliculatus_F_contig1165:14897..21401- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1165.1455.1 ID=mRNA_H-canaliculatus_F_contig1165.1455.1|Name=mRNA_H-canaliculatus_F_contig1165.1455.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=6505bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1165:14897..21401- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1165:14897..21401- >mRNA_H-canaliculatus_F_contig1165.1455.1 ID=mRNA_H-canaliculatus_F_contig1165.1455.1|Name=mRNA_H-canaliculatus_F_contig1165.1455.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2766bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1165:14897..21401- (Hapterophycus canaliculatus Oshoro5f female)back to top |