prot_H-canaliculatus_F_contig11633.1442.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig11633.1442.1
Unique Nameprot_H-canaliculatus_F_contig11633.1442.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length318
Homology
BLAST of mRNA_H-canaliculatus_F_contig11633.1442.1 vs. uniprot
Match: D8LFV7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFV7_ECTSI)

HSP 1 Score: 234 bits (596), Expect = 2.220e-66
Identity = 260/324 (80.25%), Postives = 273/324 (84.26%), Query Frame = 0
Query:    1 MEFEHSSVALDLRFIPDGVSFEGRQARDKSTSVPSSYQPPSFICKALQQTKVECTWDEAPSERQVLLGRVSQWRDAAEEDFEAYLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---DDGDGEEGEGEDTEFSFVPRGAATAMDEDGEDVPSGGAEGLLARRKAKEALANETPWEASLRKERERKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGFFLEEAGS----SKANRREPKSKXXXXXXXAVKEGASDDADGVLAAAAMTGGAD 317
            MEFEHSSVALDLRFIPD VSFEGRQ RDKS+SVPSSYQPPSFICKALQQT+VECTWDEAPSERQVLLGRVSQWRDAAEEDFEAYLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    DGD    EGED EF+FVPRG+A A+ EDG ++ SGGAEGLLARRKAKEALA ETPWEASLRKERERK      XXXXXXXXXXXXX XXXXXXXX   DGFFLEEA S    SK++ R+ K+          K+  S D DG  AAA + GGAD
Sbjct:  454 MEFEHSSVALDLRFIPDEVSFEGRQVRDKSSSVPSSYQPPSFICKALQQTRVECTWDEAPSERQVLLGRVSQWRDAAEEDFEAYLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQDGD----EGEDKEFTFVPRGSAGAVVEDGSEIVSGGAEGLLARRKAKEALAKETPWEASLRKERERK------XXXXXXXXXXXXXEXXXXXXXXGEADGFFLEEAVSKGKGSKSSNRKGKNGM-------AKDRGSGDTDGDSAAAGIAGGAD 760          
BLAST of mRNA_H-canaliculatus_F_contig11633.1442.1 vs. uniprot
Match: A0A4D9D496_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D496_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 2.680e-17
Identity = 42/87 (48.28%), Postives = 62/87 (71.26%), Query Frame = 0
Query:    1 MEFEHSSVALDLRFIPDGVSFEGRQARDKST-SVPSSYQPPSFICKALQQTKVECTWDEAPSERQVLLGRVSQWRDAAEEDFEAYLA 86
            +EFE+SS  +D+RF+P  V  EGR+ RD+++ S+P SYQPP F+ +ALQQT+VEC+W+    ER+  L +  +W +  E+D  AYLA
Sbjct:  437 LEFENSSSQVDVRFVPTDVDLEGRKVRDEASGSLPPSYQPPIFVTRALQQTRVECSWEAGDEERERRLTQSHRWEEMEEDDMRAYLA 523          
BLAST of mRNA_H-canaliculatus_F_contig11633.1442.1 vs. uniprot
Match: A0A7R9TGR1_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9TGR1_MICPS)

HSP 1 Score: 87.0 bits (214), Expect = 4.280e-17
Identity = 43/87 (49.43%), Postives = 54/87 (62.07%), Query Frame = 0
Query:    1 MEFEHSSVALDLRFIPDGVSFEGRQARDKSTSVPSSYQPPSFICKALQQTKVECTWDEAPSERQVLLGRVSQWRDAAEEDFEAYLAS 87
            +EFE SS  LDLR++PD  SFEGR+ RD +T VPS Y+PP F  KALQ T V+ +WD+    R   L R        +EDF AY+ S
Sbjct:   69 LEFERSSCRLDLRYVPDDQSFEGREVRDVATEVPSDYEPPDFQMKALQHTNVKLSWDDDDPTRTKALRRKLTEDRLKDEDFAAYMGS 155          
BLAST of mRNA_H-canaliculatus_F_contig11633.1442.1 vs. uniprot
Match: A0A485LPN8_9STRA (Aste57867_23876 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LPN8_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 2.820e-15
Identity = 40/87 (45.98%), Postives = 59/87 (67.82%), Query Frame = 0
Query:    1 MEFEHSSVALDLRFIPDGVSFEGRQARDKSTSVPSSYQPPSFICKALQQTKVECTWDEAPSERQVLLGRVSQWRDAAEEDFEAYLAS 87
            +E+E SS  LDLRF+PD V+F     ++ ++S+P SY P  F   ALQ T +ECTWD+   ERQ  L R++ W++  ++DF+AY+AS
Sbjct:  296 LEYETSSNLLDLRFVPDDVTF-ANTPKESASSMPESYTPAIFATLALQNTDIECTWDQDDGERQDKLTRMTNWKELKDDDFDAYVAS 381          
BLAST of mRNA_H-canaliculatus_F_contig11633.1442.1 vs. uniprot
Match: C1N9Z7_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N9Z7_MICPC)

HSP 1 Score: 87.0 bits (214), Expect = 3.120e-15
Identity = 43/87 (49.43%), Postives = 54/87 (62.07%), Query Frame = 0
Query:    1 MEFEHSSVALDLRFIPDGVSFEGRQARDKSTSVPSSYQPPSFICKALQQTKVECTWDEAPSERQVLLGRVSQWRDAAEEDFEAYLAS 87
            +EFE SS  LDLR++PD  SFEGR+ RD +T VPS Y+PP F  KALQ T V+ +WD+    R   L R        +EDF AY+ S
Sbjct:  274 LEFERSSCRLDLRYVPDDQSFEGREVRDVATEVPSDYEPPDFQMKALQHTNVKLSWDDDDPTRTKALRRKLTEDRLKDEDFAAYMGS 360          
BLAST of mRNA_H-canaliculatus_F_contig11633.1442.1 vs. uniprot
Match: A0A024TZB5_9STRA (NUC153 domain-containing protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TZB5_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 9.270e-15
Identity = 41/86 (47.67%), Postives = 55/86 (63.95%), Query Frame = 0
Query:    1 MEFEHSSVALDLRFIPDGVSFEGRQARDKSTSVPSSYQPPSFICKALQQTKVECTWDEAPSERQVLLGRVSQWRDAAEEDFEAYLA 86
            +E+E SS  LDLRF+PD V F     ++ +TSVP +Y P  F   ALQ T++ECTWDE   ER   L R + W+D  ++DF AY+A
Sbjct:  289 LEYETSSNTLDLRFVPDDVEFTN-SPKETATSVPDTYTPAIFATLALQNTELECTWDEEDGERMDKLTRPANWKDLNDDDFSAYVA 373          
BLAST of mRNA_H-canaliculatus_F_contig11633.1442.1 vs. uniprot
Match: A0A1E7F590_9STRA (NUC153 domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F590_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 3.270e-14
Identity = 45/93 (48.39%), Postives = 59/93 (63.44%), Query Frame = 0
Query:    1 MEFEHSSVALDLRFIP-DGVS--FEGRQARDKSTSVPSSYQPPSFICKALQQTKVECTWDEAPSERQVLLGRVSQ--WRDAAE-EDFEAYLAS 87
            MEFEHSS A+DLR +P D +      R  RD++TS+P  Y+PP F+  ALQQTKV+CTWD+   ER+  L       W  + E +D +AYLAS
Sbjct:  353 MEFEHSSTAIDLRTLPKDDLESVIANRPMRDEATSIPGKYEPPEFVVSALQQTKVQCTWDQGDKERERKLTNYGSTGWEASFEADDLKAYLAS 445          
BLAST of mRNA_H-canaliculatus_F_contig11633.1442.1 vs. uniprot
Match: C1ECS6_MICCC (NUC153 domain-containing protein n=2 Tax=Micromonas TaxID=38832 RepID=C1ECS6_MICCC)

HSP 1 Score: 84.0 bits (206), Expect = 3.480e-14
Identity = 41/86 (47.67%), Postives = 52/86 (60.47%), Query Frame = 0
Query:    1 MEFEHSSVALDLRFIPDGVSFEGRQARDKSTSVPSSYQPPSFICKALQQTKVECTWDEAPSERQVLLGRVSQWRDAAEEDFEAYLA 86
            +EFE SS  LDLR++ D  SF+GR+ RD +T VP  Y+PP F  KALQ T V+ TWDE    R+    R        +EDF AY+A
Sbjct:  379 LEFERSSCKLDLRYVQDDQSFDGREIRDFATDVPGDYEPPEFQAKALQHTNVKLTWDEDDPARKKAFARKLTEDKLKDEDFAAYMA 464          
BLAST of mRNA_H-canaliculatus_F_contig11633.1442.1 vs. uniprot
Match: A0A3L6UVS7_9STRA (NUC153 domain-containing protein (Fragment) n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6UVS7_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 9.130e-14
Identity = 39/86 (45.35%), Postives = 56/86 (65.12%), Query Frame = 0
Query:    1 MEFEHSSVALDLRFIPDGVSFEGRQARDKSTSVPSSYQPPSFICKALQQTKVECTWDEAPSERQVLLGRVSQWRDAAEEDFEAYLA 86
            +E+E SS  LDLRF+P+ V+F+    ++ +T+VP SY P  F   ALQ T++ECTWDE    R   L R + W+D  ++DF AY+A
Sbjct:  211 LEYETSSNTLDLRFVPNDVTFDN-PPKESATAVPDSYTPSIFATLALQNTELECTWDEGDGARVDKLTRPANWKDLKDDDFAAYVA 295          
BLAST of mRNA_H-canaliculatus_F_contig11633.1442.1 vs. uniprot
Match: A0A7S0KGG4_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0KGG4_MICPS)

HSP 1 Score: 82.4 bits (202), Expect = 9.390e-14
Identity = 40/86 (46.51%), Postives = 52/86 (60.47%), Query Frame = 0
Query:    1 MEFEHSSVALDLRFIPDGVSFEGRQARDKSTSVPSSYQPPSFICKALQQTKVECTWDEAPSERQVLLGRVSQWRDAAEEDFEAYLA 86
            +EFE SS  LDLR++ D  SF+GR+ RD ++ VP  Y+PP F  KALQ T V+ TWDE    R+    R        +EDF AY+A
Sbjct:  337 LEFERSSCKLDLRYVQDDQSFDGREIRDFASDVPGDYEPPEFQAKALQHTNVKLTWDEDDPARKKAFARKLTEDKLKDEDFAAYIA 422          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11633.1442.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFV7_ECTSI2.220e-6680.25Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A4D9D496_9STRA2.680e-1748.28Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7R9TGR1_MICPS4.280e-1749.43Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
A0A485LPN8_9STRA2.820e-1545.98Aste57867_23876 protein n=1 Tax=Aphanomyces stella... [more]
C1N9Z7_MICPC3.120e-1549.43Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]
A0A024TZB5_9STRA9.270e-1547.67NUC153 domain-containing protein n=3 Tax=Aphanomyc... [more]
A0A1E7F590_9STRA3.270e-1448.39NUC153 domain-containing protein n=1 Tax=Fragilari... [more]
C1ECS6_MICCC3.480e-1447.67NUC153 domain-containing protein n=2 Tax=Micromona... [more]
A0A3L6UVS7_9STRA9.130e-1445.35NUC153 domain-containing protein (Fragment) n=4 Ta... [more]
A0A7S0KGG4_MICPS9.390e-1446.51Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 224..251
IPR039754Pre-rRNA-processing protein Esf1PANTHERPTHR12202UNCHARACTERIZEDcoord: 1..299

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig11633contigH-canaliculatus_F_contig11633:229..3271 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig11633.1442.1mRNA_H-canaliculatus_F_contig11633.1442.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig11633 214..3271 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig11633.1442.1 ID=prot_H-canaliculatus_F_contig11633.1442.1|Name=mRNA_H-canaliculatus_F_contig11633.1442.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=318bp
MEFEHSSVALDLRFIPDGVSFEGRQARDKSTSVPSSYQPPSFICKALQQT
KVECTWDEAPSERQVLLGRVSQWRDAAEEDFEAYLASSSDDDGDSSSSGE
EQEGAEDASARGGDGAGAGRAASKRDKKAAARRARKLLLRDALGGSEDSD
GSDGGAAADGSEEESSDDGDGEEGEGEDTEFSFVPRGAATAMDEDGEDVP
SGGAEGLLARRKAKEALANETPWEASLRKERERKKARKKAIKDRIEAEEA
AEAESDCDSDGDHEGDGFFLEEAGSSKANRREPKSKKNKKNKKAVKEGAS
DDADGVLAAAAMTGGADD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039754Esf1