prot_H-canaliculatus_F_contig11607.1413.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig11607.1413.1
Unique Nameprot_H-canaliculatus_F_contig11607.1413.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length55
Homology
BLAST of mRNA_H-canaliculatus_F_contig11607.1413.1 vs. uniprot
Match: A0A6H5K059_9PHAE (G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K059_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 3.730e-23
Identity = 52/54 (96.30%), Postives = 52/54 (96.30%), Query Frame = 0
Query:    1 MVKATKVIREKLKQVDMVFEVRDARIPFTSANDDLDKIVGPSKARLIVLNKVRA 54
            MVKATKVIREKLKQVDMVFEVRDARIPFTSAN DLDKIVGPSKARLIVLNK RA
Sbjct:   78 MVKATKVIREKLKQVDMVFEVRDARIPFTSANQDLDKIVGPSKARLIVLNKARA 131          
BLAST of mRNA_H-canaliculatus_F_contig11607.1413.1 vs. uniprot
Match: UPI000FD984F0 (ribosome biogenesis GTPase YlqF n=1 Tax=Halobacteriovorax sp. HLS TaxID=2234000 RepID=UPI000FD984F0)

HSP 1 Score: 64.3 bits (155), Expect = 9.090e-11
Identity = 33/55 (60.00%), Postives = 42/55 (76.36%), Query Frame = 0
Query:    1 MVKATKVIREKLKQVDMVFEVRDARIPFTSANDDLDKIVGPSKARLIVLNKVRAS 55
            M KATK +  KLK VD+V E+RDARIP  S N+DL K++G +K+RLIVLNK+  S
Sbjct:   32 MAKATKQVSNKLKMVDIVLEIRDARIPLLSGNEDLKKLIG-TKSRLIVLNKMNLS 85          
BLAST of mRNA_H-canaliculatus_F_contig11607.1413.1 vs. uniprot
Match: A0A1L8I540_9BACI (Ribosome biogenesis GTPase A n=1 Tax=Bacillaceae bacterium G1 TaxID=1836462 RepID=A0A1L8I540_9BACI)

HSP 1 Score: 62.8 bits (151), Expect = 3.210e-10
Identity = 31/51 (60.78%), Postives = 41/51 (80.39%), Query Frame = 0
Query:    1 MVKATKVIREKLKQVDMVFEVRDARIPFTSANDDLDKIVGPSKARLIVLNK 51
            M KAT++IRE+LKQVD+VFE+ DARIP +S N  +D I+GP K RL++ NK
Sbjct:   11 MAKATRLIRERLKQVDVVFELLDARIPSSSRNPQIDAIIGP-KPRLVIFNK 60          
BLAST of mRNA_H-canaliculatus_F_contig11607.1413.1 vs. uniprot
Match: A0A1Y5FCY6_9PROT (Ribosome biogenesis GTPase A n=1 Tax=Halobacteriovorax marinus TaxID=97084 RepID=A0A1Y5FCY6_9PROT)

HSP 1 Score: 62.0 bits (149), Expect = 5.350e-10
Identity = 33/52 (63.46%), Postives = 39/52 (75.00%), Query Frame = 0
Query:    1 MVKATKVIREKLKQVDMVFEVRDARIPFTSANDDLDKIVGPSKARLIVLNKV 52
            M KAT+ +  KLK VD+V E+RDARIP  S NDDL  +VG +K RLIVLNKV
Sbjct:    1 MAKATRQVSGKLKMVDIVLEIRDARIPLLSGNDDLKSLVG-NKCRLIVLNKV 51          
BLAST of mRNA_H-canaliculatus_F_contig11607.1413.1 vs. uniprot
Match: A0A2G8HQV5_9PROT (Ribosome biogenesis GTPase A n=1 Tax=Halobacteriovorax sp. JY17 TaxID=2014617 RepID=A0A2G8HQV5_9PROT)

HSP 1 Score: 62.0 bits (149), Expect = 6.310e-10
Identity = 32/55 (58.18%), Postives = 41/55 (74.55%), Query Frame = 0
Query:    1 MVKATKVIREKLKQVDMVFEVRDARIPFTSANDDLDKIVGPSKARLIVLNKVRAS 55
            M KA K + +KLK VD++ E+RDARIP  S N+DL K+VG +K RL+VLNKV  S
Sbjct:   32 MAKAMKQVGDKLKMVDIILELRDARIPLLSGNEDLKKLVG-NKCRLVVLNKVNLS 85          
BLAST of mRNA_H-canaliculatus_F_contig11607.1413.1 vs. uniprot
Match: E1WXC8_HALMS (Ribosome biogenesis GTPase A n=2 Tax=Halobacteriovorax marinus TaxID=97084 RepID=E1WXC8_HALMS)

HSP 1 Score: 62.0 bits (149), Expect = 6.760e-10
Identity = 33/52 (63.46%), Postives = 40/52 (76.92%), Query Frame = 0
Query:    1 MVKATKVIREKLKQVDMVFEVRDARIPFTSANDDLDKIVGPSKARLIVLNKV 52
            M KA K + EKLK VD+V E+RDARIP  S N+DL K++G +K RLIVLNKV
Sbjct:   51 MAKAMKQVGEKLKMVDIVLELRDARIPLLSGNEDLKKVLG-NKCRLIVLNKV 101          
BLAST of mRNA_H-canaliculatus_F_contig11607.1413.1 vs. uniprot
Match: A0A7X6YBQ8_9FIRM (Ribosome biogenesis GTPase A n=1 Tax=Clostridia bacterium TaxID=2044939 RepID=A0A7X6YBQ8_9FIRM)

HSP 1 Score: 59.3 bits (142), Expect = 5.450e-9
Identity = 31/51 (60.78%), Postives = 41/51 (80.39%), Query Frame = 0
Query:    1 MVKATKVIREKLKQVDMVFEVRDARIPFTSANDDLDKIVGPSKARLIVLNK 51
            M KA +++RE+LK VD+V E+RDARIP +S N DL+K++G  K RLIVLNK
Sbjct:   10 MAKAKRLLREQLKLVDVVLEIRDARIPDSSGNPDLEKLLGTRK-RLIVLNK 59          
BLAST of mRNA_H-canaliculatus_F_contig11607.1413.1 vs. uniprot
Match: A0A847P9T7_9FIRM (Ribosome biogenesis GTPase A n=1 Tax=Erysipelotrichia bacterium TaxID=2184014 RepID=A0A847P9T7_9FIRM)

HSP 1 Score: 58.5 bits (140), Expect = 1.070e-8
Identity = 32/51 (62.75%), Postives = 40/51 (78.43%), Query Frame = 0
Query:    1 MVKATKVIREKLKQVDMVFEVRDARIPFTSANDDLDKIVGPSKARLIVLNK 51
            M KA + +REK+K VDMV E+RDARIP +S N  LD+I+G SK RLIVL+K
Sbjct:   14 MTKAKREMREKIKLVDMVIEIRDARIPLSSINPLLDEIIG-SKPRLIVLSK 63          
BLAST of mRNA_H-canaliculatus_F_contig11607.1413.1 vs. uniprot
Match: UPI00195A05F0 (ribosome biogenesis GTPase YlqF n=1 Tax=Clostridium sardiniense TaxID=29369 RepID=UPI00195A05F0)

HSP 1 Score: 57.4 bits (137), Expect = 2.700e-8
Identity = 31/51 (60.78%), Postives = 38/51 (74.51%), Query Frame = 0
Query:    1 MVKATKVIREKLKQVDMVFEVRDARIPFTSANDDLDKIVGPSKARLIVLNK 51
            M K  + I+E LK VD V E+RDARIP +SAN D+DK+VG  K RLI+LNK
Sbjct:   10 MKKTQREIKENLKLVDAVIEIRDARIPASSANPDIDKLVG-DKPRLILLNK 59          
BLAST of mRNA_H-canaliculatus_F_contig11607.1413.1 vs. uniprot
Match: A0A343JBM8_9CLOT (Ribosome biogenesis GTPase A n=1 Tax=Clostridium isatidis TaxID=182773 RepID=A0A343JBM8_9CLOT)

HSP 1 Score: 57.4 bits (137), Expect = 2.710e-8
Identity = 31/51 (60.78%), Postives = 39/51 (76.47%), Query Frame = 0
Query:    1 MVKATKVIREKLKQVDMVFEVRDARIPFTSANDDLDKIVGPSKARLIVLNK 51
            M K  + I+E LK VD V E+RDARIP +SAN D+DKI G +KAR+I+LNK
Sbjct:   11 MKKTQREIKENLKVVDAVIEIRDARIPRSSANPDIDKICG-NKARIILLNK 60          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11607.1413.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K059_9PHAE3.730e-2396.30G domain-containing protein n=2 Tax=Ectocarpus Tax... [more]
UPI000FD984F09.090e-1160.00ribosome biogenesis GTPase YlqF n=1 Tax=Halobacter... [more]
A0A1L8I540_9BACI3.210e-1060.78Ribosome biogenesis GTPase A n=1 Tax=Bacillaceae b... [more]
A0A1Y5FCY6_9PROT5.350e-1063.46Ribosome biogenesis GTPase A n=1 Tax=Halobacteriov... [more]
A0A2G8HQV5_9PROT6.310e-1058.18Ribosome biogenesis GTPase A n=1 Tax=Halobacteriov... [more]
E1WXC8_HALMS6.760e-1063.46Ribosome biogenesis GTPase A n=2 Tax=Halobacteriov... [more]
A0A7X6YBQ8_9FIRM5.450e-960.78Ribosome biogenesis GTPase A n=1 Tax=Clostridia ba... [more]
A0A847P9T7_9FIRM1.070e-862.75Ribosome biogenesis GTPase A n=1 Tax=Erysipelotric... [more]
UPI00195A05F02.700e-860.78ribosome biogenesis GTPase YlqF n=1 Tax=Clostridiu... [more]
A0A343JBM8_9CLOT2.710e-860.78Ribosome biogenesis GTPase A n=1 Tax=Clostridium i... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..54
e-value: 3.7E-8
score: 35.5
NoneNo IPR availablePANTHERPTHR45782FAMILY NOT NAMEDcoord: 1..51
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig11607contigH-canaliculatus_F_contig11607:160..1270 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig11607.1413.1mRNA_H-canaliculatus_F_contig11607.1413.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig11607 160..1282 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig11607.1413.1 ID=prot_H-canaliculatus_F_contig11607.1413.1|Name=mRNA_H-canaliculatus_F_contig11607.1413.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=55bp
MVKATKVIREKLKQVDMVFEVRDARIPFTSANDDLDKIVGPSKARLIVLN
KVRAS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase