mRNA_H-canaliculatus_F_contig11577.1391.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig11577.1391.1 vs. uniprot
Match: D7FR68_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR68_ECTSI) HSP 1 Score: 182 bits (463), Expect = 6.530e-49 Identity = 93/103 (90.29%), Postives = 96/103 (93.20%), Query Frame = 1 Query: 1609 SSAVAEGAVMDATVAPDASEVPEVDASQPSTTLQIRLHDGRRVRVQLNMHHTVRHIQAIIAREGAGGGSYMLMAGYPPTPLADSTQTLEQAGLNGASITQKLA 1917 +S VAEGAVM AT APDASE PEVDASQPSTTLQIRLHDGRRVR QLNMHHTVRHIQAIIAREGAGGGSYMLMAGYPP PL+DS+QTLEQAGL GASITQKLA Sbjct: 162 ASTVAEGAVMTATGAPDASEAPEVDASQPSTTLQIRLHDGRRVRAQLNMHHTVRHIQAIIAREGAGGGSYMLMAGYPPAPLSDSSQTLEQAGLKGASITQKLA 264
BLAST of mRNA_H-canaliculatus_F_contig11577.1391.1 vs. uniprot
Match: A0A835ZC87_9STRA (SEP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC87_9STRA) HSP 1 Score: 110 bits (275), Expect = 2.770e-23 Identity = 56/93 (60.22%), Postives = 67/93 (72.04%), Query Frame = 1 Query: 19 EGGPS-TERTITITMYNGGFTVDEGPFRRLDDPANKDFLKDLASGVVPKELEAGATPGKG-TDVKLVDKQNEDYV---APAYVAFGGDGQTMG 282 EGG + ITI MY GFTV++GPFRRLDDPAN+ FL+DL G+VP+EL G G+G VKL D++NEDYV PAYV FGG+GQTMG Sbjct: 73 EGGEEGADSQITIFMYRQGFTVNDGPFRRLDDPANEPFLRDLGKGIVPRELADGLGKGRGEVHVKLADRRNEDYVPPPTPAYVPFGGEGQTMG 165
BLAST of mRNA_H-canaliculatus_F_contig11577.1391.1 vs. uniprot
Match: A0A7S2HE37_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HE37_9STRA) HSP 1 Score: 108 bits (269), Expect = 1.690e-22 Identity = 55/100 (55.00%), Postives = 66/100 (66.00%), Query Frame = 1 Query: 1621 AEGAVMDATVAP-DASEVPEVDASQPSTTLQIRLHDGRRVRVQLNMHHTVRHIQAIIAREGAGGGSYMLMAGYPPTPLADSTQTLEQAGLNGASITQKLA 1917 A A DA VA D E P VD SQP +Q+RLH G+R+RV LN HHT+RHIQA+I EGAG Y LMAGYPP + D Q++ +A LNG + QKLA Sbjct: 166 ASEADTDAVVAQSDDLETPVVDESQPKVVIQVRLHSGKRMRVTLNSHHTIRHIQALIQAEGAGASPYTLMAGYPPAKITDMNQSVGEAKLNGTQVVQKLA 265
BLAST of mRNA_H-canaliculatus_F_contig11577.1391.1 vs. uniprot
Match: A0A5D6Y7H8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y7H8_9STRA) HSP 1 Score: 105 bits (261), Expect = 1.970e-21 Identity = 55/106 (51.89%), Postives = 72/106 (67.92%), Query Frame = 1 Query: 1600 GSRSSAVAEGAVMDATVAPDASEVPEVDASQPSTTLQIRLHDGRRVRVQLNMHHTVRHIQAIIAREGAGGGSYMLMAGYPPTPL-ADSTQTLEQAGLNGASITQKL 1914 G A + GA A +A+E P VD +P+TTLQ+RLHDG R+R LN+ HT+R + AII GAG +Y L+AG+PP P+ AD +QT+E AGL GAS+TQKL Sbjct: 160 GQSMGAASYGAEAVIAGAAEAAERPVVDDKKPTTTLQLRLHDGTRLRETLNLDHTIRDLHAIIQLNGAGAAAYTLLAGFPPRPVSADLSQTIEAAGLKGASVTQKL 265
BLAST of mRNA_H-canaliculatus_F_contig11577.1391.1 vs. uniprot
Match: F0XZK1_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZK1_AURAN) HSP 1 Score: 102 bits (254), Expect = 3.990e-21 Identity = 48/83 (57.83%), Postives = 60/83 (72.29%), Query Frame = 1 Query: 1666 EVPEVDASQPSTTLQIRLHDGRRVRVQLNMHHTVRHIQAIIAREGAGGGSYMLMAGYPPTPLADSTQTLEQAGLNGASITQKL 1914 E P VD + P TTLQIRL +G+R+R LN+ HTV H+ A + EG G +Y+L+AG+PP PLAD TLE AGL GAS+TQKL Sbjct: 121 EKPVVDDAAPKTTLQIRLANGKRIRATLNLSHTVGHLDAYVREEGGAGQAYVLLAGFPPAPLADPNATLEAAGLKGASVTQKL 203
BLAST of mRNA_H-canaliculatus_F_contig11577.1391.1 vs. uniprot
Match: K3X5Z0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X5Z0_GLOUD) HSP 1 Score: 100 bits (249), Expect = 8.570e-20 Identity = 54/103 (52.43%), Postives = 69/103 (66.99%), Query Frame = 1 Query: 1609 SSAVAEGAVMDATVAPDASEVPEVDASQPSTTLQIRLHDGRRVRVQLNMHHTVRHIQAIIAREGAGGGSYMLMAGYPPTPLA-DSTQTLEQAGLNGASITQKL 1914 SS VA AV+ P +E P +D +P TTLQIRLH+G R+R LN+ HT+R + AII AG SY L+AG+PP P++ D QT+E AGL GAS+TQKL Sbjct: 171 SSTVAADAVIQGATVP--AERPVIDDKKPKTTLQIRLHNGTRLRETLNLDHTLRDLHAIIQLNDAGAASYTLLAGFPPRPISVDLDQTIESAGLKGASVTQKL 271
BLAST of mRNA_H-canaliculatus_F_contig11577.1391.1 vs. uniprot
Match: D0N5D2_PHYIT (Uncharacterized protein n=19 Tax=Phytophthora TaxID=4783 RepID=D0N5D2_PHYIT) HSP 1 Score: 98.2 bits (243), Expect = 4.070e-19 Identity = 53/103 (51.46%), Postives = 70/103 (67.96%), Query Frame = 1 Query: 1609 SSAVAEGAVMDATVAPDASEVPEVDASQPSTTLQIRLHDGRRVRVQLNMHHTVRHIQAIIAREGAGGGSYMLMAGYPPTPLA-DSTQTLEQAGLNGASITQKL 1914 S+ A AV+ P +E P +D +PSTTLQIRLH+G+R+R LN+ HTVR + AII AG Y L+AG+PP P++ D QT+EQAGL GA++TQKL Sbjct: 158 STTYAAEAVIQGDAVP--AERPVIDDKKPSTTLQIRLHNGQRLRETLNLDHTVRDLHAIIQLNDAGAQPYTLLAGFPPRPVSTDLAQTIEQAGLKGAAVTQKL 258
BLAST of mRNA_H-canaliculatus_F_contig11577.1391.1 vs. uniprot
Match: A0A6G0X8N3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X8N3_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 7.320e-19 Identity = 53/103 (51.46%), Postives = 70/103 (67.96%), Query Frame = 1 Query: 1609 SSAVAEGAVMDATVAPDASEVPEVDASQPSTTLQIRLHDGRRVRVQLNMHHTVRHIQAIIAREGAGGGSYMLMAGYPPTPLADSTQTLEQAGLNGASITQKLA 1917 SSAV A++ T A + +D++QP+T +QIRL +G RVR LN HTVR I AI+AREGA G Y+L+AG+PP P+ TL++AGL GA+ITQK A Sbjct: 160 SSAVDSNAIVHETSA----TLKPLDSTQPTTVIQIRLANGGRVRETLNHTHTVRDIHAIVAREGAAGQPYVLLAGFPPKPIVSQDATLQEAGLLGAAITQKWA 258
BLAST of mRNA_H-canaliculatus_F_contig11577.1391.1 vs. uniprot
Match: A0A3F2RLP8_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RLP8_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 7.780e-19 Identity = 52/103 (50.49%), Postives = 69/103 (66.99%), Query Frame = 1 Query: 1609 SSAVAEGAVMDATVAPDASEVPEVDASQPSTTLQIRLHDGRRVRVQLNMHHTVRHIQAIIAREGAGGGSYMLMAGYPPTPLA-DSTQTLEQAGLNGASITQKL 1914 S+ + AV+ P SE P +D +P TTLQIRLH+G+R+R LN+ HT+R + AII AG Y L+AG+PP P++ D QT+EQAGL GA+ITQKL Sbjct: 160 STTYSADAVIQGAAVP--SERPVIDDKKPKTTLQIRLHNGQRLRETLNLEHTIRDLHAIIQLNDAGAQPYTLLAGFPPRPVSTDLDQTIEQAGLKGAAITQKL 260
BLAST of mRNA_H-canaliculatus_F_contig11577.1391.1 vs. uniprot
Match: A0A7S2FCW2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FCW2_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 4.220e-18 Identity = 45/89 (50.56%), Postives = 59/89 (66.29%), Query Frame = 1 Query: 16 GEGGPSTERTITITMYNGGFTVDEGPFRRLDDPANKDFLKDLASGVVPKELEAGATPGKGTDVKLVDKQNEDYVAPAYVAFGGDGQTMG 282 GE G TIT+Y GFTVD+GP R L+DPANK F+ ++ G VP EL+ + PG DV+L DK+ E+YV PAY A+ G GQ++G Sbjct: 36 GEAGSGGAGKRTITVYANGFTVDDGPLRDLEDPANKKFIMEMMQGRVPTELQDPSAPGD-VDVQLHDKRGEEYVKPAYTAYSGQGQSIG 123 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11577.1391.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig11577.1391.1 >prot_H-canaliculatus_F_contig11577.1391.1 ID=prot_H-canaliculatus_F_contig11577.1391.1|Name=mRNA_H-canaliculatus_F_contig11577.1391.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=231bp MKLSPGFSWDKITPCALFDQHVPYTRRLLPQAWCQNPRLLVSFHVQHAVFback to top mRNA from alignment at H-canaliculatus_F_contig11577:136..3709- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig11577.1391.1 ID=mRNA_H-canaliculatus_F_contig11577.1391.1|Name=mRNA_H-canaliculatus_F_contig11577.1391.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3574bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11577:136..3709- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11577:136..3709- >mRNA_H-canaliculatus_F_contig11577.1391.1 ID=mRNA_H-canaliculatus_F_contig11577.1391.1|Name=mRNA_H-canaliculatus_F_contig11577.1391.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1386bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11577:136..3709- (Hapterophycus canaliculatus Oshoro5f female)back to top |