Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 1011 |
| Cds size | 1011 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622928839.2860067-CDS-H-canaliculatus_F_contig11506:2865..3245 | 1622928839.2860067-CDS-H-canaliculatus_F_contig11506:2865..3245 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig11506 2866..3245 - |
| 1696845584.3025632-CDS-H-canaliculatus_F_contig11506:2865..3245 | 1696845584.3025632-CDS-H-canaliculatus_F_contig11506:2865..3245 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig11506 2866..3245 - |
| 1622928839.3033948-CDS-H-canaliculatus_F_contig11506:3341..3972 | 1622928839.3033948-CDS-H-canaliculatus_F_contig11506:3341..3972 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig11506 3342..3972 - |
| 1696845584.3128107-CDS-H-canaliculatus_F_contig11506:3341..3972 | 1696845584.3128107-CDS-H-canaliculatus_F_contig11506:3341..3972 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig11506 3342..3972 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig11506.1331.1 >prot_H-canaliculatus_F_contig11506.1331.1 ID=prot_H-canaliculatus_F_contig11506.1331.1|Name=mRNA_H-canaliculatus_F_contig11506.1331.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=337bp
QSRERFLAAFSVDVTGIRRQLDRLRNETHRPQTSAPTAGATTPTLTALTP
TVGTTAAWSRGGEAAEAGKQAAAAAASPGESSGGGGGGSTSPPVVTVLHL
VVKAAAASVLEVMPPSTAAFCSSPSSSSSSSVVETSFRRGGGGGGGGGVV
RGGRAGTRVACLSSSSRTGRAGKRAAALVPSPASGGPPVSPASPPAVLRT
ATSSTDELSSRGGRGGGGRGGGGGEGGAVVIVEGAEEKSVGAIAAEIAAA
AAAAAAAAARSGGGRGGSPPLLHPEAVQRLRQYGGMCNSDSDGGGGGGGS
SEPGDRARAVPLLHPGAALGILGRDPSEVCGGGGGGG back to topmRNA from alignment at H-canaliculatus_F_contig11506:2866..3972- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-canaliculatus_F_contig11506.1331.1 ID=mRNA_H-canaliculatus_F_contig11506.1331.1|Name=mRNA_H-canaliculatus_F_contig11506.1331.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1107bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11506:2866..3972- (Hapterophycus canaliculatus Oshoro5f female)
CAGAGCCGGGAACGGTTCTTGGCCGCCTTCTCGGTGGACGTGACGGGCAT
CCGGAGGCAGCTGGACCGCCTGCGCAACGAGACCCATCGGCCCCAGACCT
CGGCGCCAACAGCAGGAGCAACAACGCCAACACTAACAGCGCTGACGCCA
ACAGTAGGTACTACGGCGGCGTGGTCGCGGGGCGGCGAGGCGGCGGAGGC
TGGAAAGCAGGCGGCGGCGGCGGCGGCGTCGCCAGGGGAAAGCAGCGGCG
GCGGCGGCGGCGGCTCGACCTCTCCCCCCGTGGTGACCGTGCTGCATCTG
GTGGTGAAGGCCGCGGCGGCTTCCGTCCTGGAGGTCATGCCACCATCGAC
GGCGGCGTTCTGTTCGTCGCCGAGTTCCTCTTCCTCTTCCTCCGTCGTCG
AAACGAGCTTCCGGCGAGGAGGAGGAGGAGGAGGAGGAGGTGGTGTCGTT
CGTGGCGGCAGGGCGGGAACGCGCGTCGCGTGCTTGTCGAGCAGCAGCAG
GACCGGCCGCGCCGGGAAAAGAGCGGCGGCGCTGGTACCCTCCCCGGCGT
CGGGGGGACCCCCGGTCTCCCCTGCGTCTCCCCCAGCGGTCCTGAGGACT
GCTACGTCTTCCACCGATGAACTCAGTAGCAGTAGCAGCAGCAGTAGCAG
CAGCAGCAGCAGCAGCAGTAGCGGCGGTGGCGGCACTTTCAACAAGAAGG
AAAGCATCGGAGAAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGA
AGAGGAGGAGGAGGAGGAGAGGGAGGCGCCGTGGTCATCGTCGAGGGGGC
GGAAGAGAAGAGCGTCGGCGCGATCGCTGCAGAAATAGCGGCGGCGGCGG
CGGCGGCGGCGGCGGCGGCAGCAAGATCAGGAGGAGGGCGGGGGGGGTCG
CCGCCGCTCTTGCACCCCGAAGCTGTCCAGAGATTGCGACAGTACGGCGG
GATGTGCAACTCCGACAGCGACGGAGGCGGGGGCGGAGGCGGCTCCAGCG
AACCTGGAGACCGGGCACGTGCGGTTCCTCTGCTCCACCCGGGTGCAGCG
TTGGGCATCCTCGGAAGGGACCCGTCGGAGGTGTGCGGCGGCGGCGGCGG
CGGCGGC back to topCoding sequence (CDS) from alignment at H-canaliculatus_F_contig11506:2866..3972- >mRNA_H-canaliculatus_F_contig11506.1331.1 ID=mRNA_H-canaliculatus_F_contig11506.1331.1|Name=mRNA_H-canaliculatus_F_contig11506.1331.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2022bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11506:2866..3972- (Hapterophycus canaliculatus Oshoro5f female)
CAGAGCCGGGAACGGTTCTTGGCCGCCTTCTCGGTGGACGTGACGGGCAT
CCGGAGGCAGCTGGACCGCCTGCGCAACGAGACCCATCGGCCCCAGACCT
CGGCGCCAACAGCAGGAGCAACAACGCCAACACTAACAGCGCTGACGCCA
ACAGTAGGTACTACGGCGGCGTGGTCGCGGGGCGGCGAGGCGGCGGAGGC
TGGAAAGCAGGCGGCGGCGGCGGCGGCGTCGCCAGGGGAAAGCAGCGGCG
GCGGCGGCGGCGGCTCGACCTCTCCCCCCGTGGTGACCGTGCTGCATCTG
GTGGTGAAGGCCGCGGCGGCTTCCGTCCTGGAGGTCATGCCACCATCGAC
GGCGGCGTTCTGTTCGTCGCCGAGTTCCTCTTCCTCTTCCTCCGTCGTCG
AAACGAGCTTCCGGCGAGGAGGAGGAGGAGGAGGAGGAGGTGGTGTCGTT
CGTGGCGGCAGGGCGGGAACGCGCGTCGCGTGCTTGTCGAGCAGCAGCAG
GACCGGCCGCGCCGGGAAAAGAGCGGCGGCGCTGGTACCCTCCCCGGCGT
CGGGGGGACCCCCGGTCTCCCCTGCGTCTCCCCCAGCGGTCCTGAGGACT
GCTACGTCTTCCACCGATGAACTCAGTAGCACAGAGCCGGGAACGGTTCT
TGGCCGCCTTCTCGGTGGACGTGACGGGCATCCGGAGGCAGCTGGACCGC
CTGCGCAACGAGACCCATCGGCCCCAGACCTCGGCGCCAACAGCAGGAGC
AACAACGCCAACACTAACAGCGCTGACGCCAACAGTAGGTACTACGGCGG
CGTGGTCGCGGGGCGGCGAGGCGGCGGAGGCTGGAAAGCAGGCGGCGGCG
GCGGCGGCGTCGCCAGGGGAAAGCAGCGGCGGCGGCGGCGGCGGCTCGAC
CTCTCCCCCCGTGGTGACCGTGCTGCATCTGGTGGTGAAGGCCGCGGCGG
CTTCCGTCCTGGAGGTCATGCCACCATCGACGGCGGCGTTCTGTTCGTCG
CCGAGTTCCTCTTCCTCTTCCTCCGTCGTCGAAACGAGCTTCCGGCGAGG
AGGAGGAGGAGGAGGAGGAGGTGGTGTCGTTCGTGGCGGCAGGGCGGGAA
CGCGCGTCGCGTGCTTGTCGAGCAGCAGCAGGACCGGCCGCGCCGGGAAA
AGAGCGGCGGCGCTGGTACCCTCCCCGGCGTCGGGGGGACCCCCGGTCTC
CCCTGCGTCTCCCCCAGCGGTCCTGAGGACTGCTACGTCTTCCACCGATG
AACTCAGTAGCAGAGGAGGAAGAGGAGGAGGAGGAAGAGGAGGAGGAGGA
GGAGAGGGAGGCGCCGTGGTCATCGTCGAGGGGGCGGAAGAGAAGAGCGT
CGGCGCGATCGCTGCAGAAATAGCGGCGGCGGCGGCGGCGGCGGCGGCGG
CGGCAGCAAGATCAGGAGGAGGGCGGGGGGGGTCGCCGCCGCTCTTGCAC
CCCGAAGCTGTCCAGAGATTGCGACAGTACGGCGGGATGTGCAACTCCGA
CAGCGACGGAGGCGGGGGCGGAGGCGGCTCCAGCGAACCTGGAGACCGGG
CACGTGCGGTTCCTCTGCTCCACCCGGGTGCAGCGTTGGGCATCCTCGGA
AGGGACCCGTCGGAGGTGTGCGGCGGCGGCGGCGGCGGCGGCGAGGAGGA
AGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGAGGGAGGCGCCGTGGT
CATCGTCGAGGGGGCGGAAGAGAAGAGCGTCGGCGCGATCGCTGCAGAAA
TAGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCAGCAAGATCAGGAGGA
GGGCGGGGGGGGTCGCCGCCGCTCTTGCACCCCGAAGCTGTCCAGAGATT
GCGACAGTACGGCGGGATGTGCAACTCCGACAGCGACGGAGGCGGGGGCG
GAGGCGGCTCCAGCGAACCTGGAGACCGGGCACGTGCGGTTCCTCTGCTC
CACCCGGGTGCAGCGTTGGGCATCCTCGGAAGGGACCCGTCGGAGGTGTG
CGGCGGCGGCGGCGGCGGCGGC back to top
|