mRNA_H-canaliculatus_F_contig11485.1310.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig11485.1310.1
Unique NamemRNA_H-canaliculatus_F_contig11485.1310.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig11485.1310.1 vs. uniprot
Match: UPI000B775A82 (rhodanese-like domain-containing protein 6 isoform X2 n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=UPI000B775A82)

HSP 1 Score: 181 bits (460), Expect = 3.270e-49
Identity = 100/219 (45.66%), Postives = 118/219 (53.88%), Query Frame = 1 
Query:  370 VLLDVRNVYETSIGHFSAEGVERLDPKTRQFSDLPKWVDDNADRLRGKRVLMYCTGGVRCEMASALIRRHCDADATGTE-VLQLSGGIERYLEAYPHSGGEDSTRAEGAAPRAAAGLDGVEGELEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGGFFRGKNFVFDERVSVPETPAGGVAVGRCLLCQRPWDDYGSRSRCTRCRVLVLVCDSCVAR 1023
            V+LD RN+YET IG F    VE LDP+ RQ+SDLP W+DDN+++LRGKRVLMYCTGG+RCEMASA IR        G E V QL GGI+RYLE +P                                                             GGFF+GKNFVFD R+SV  + A    +G CLLC  P+DDY SR RC+ CR+LVLVCDSC  R
Sbjct:  163 VVLDARNLYETRIGKFHMPNVETLDPEIRQYSDLPSWIDDNSEQLRGKRVLMYCTGGIRCEMASAYIRSR----GVGFENVFQLFGGIQRYLEQFPD------------------------------------------------------------GGFFKGKNFVFDHRISVGSSDAN--ILGTCLLCDMPFDDYSSRCRCSYCRMLVLVCDSCQMR 315
[Close]
BLAST of mRNA_H-canaliculatus_F_contig11485.1310.1 vs. uniprot
Match: A0A8J4QWW2_9ROSI (Rhodanese domain-containing protein n=1 Tax=Castanea mollissima TaxID=60419 RepID=A0A8J4QWW2_9ROSI)

HSP 1 Score: 180 bits (456), Expect = 1.080e-48
Identity = 102/236 (43.22%), Postives = 124/236 (52.54%), Query Frame = 1 
Query:  319 AARGTGPPVTAEG---EKEAVLLDVRNVYETSIGHFSAEGVERLDPKTRQFSDLPKWVDDNADRLRGKRVLMYCTGGVRCEMASALIRRHCDADATGTE-VLQLSGGIERYLEAYPHSGGEDSTRAEGAAPRAAAGLDGVEGELEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGGFFRGKNFVFDERVSVPETPAGGVAVGRCLLCQRPWDDYGSRSRCTRCRVLVLVCDSC 1014
            A +GTGP +  +     ++ VLLD RN+YET IG F A  VE LDP  RQ+SDLP W+DD +++L+GKRVLMYCTGG+RCEMASA IR    +   G E V QL GGI+RYLE +P                                                             GGFF+GKNFVFD R+SV  +      +G CLLC   +DDY SR RC  CR+LVLVCDSC
Sbjct:  137 ALQGTGPLLEKDSPTCNEDLVLLDARNLYETRIGKFHAPNVETLDPGIRQYSDLPSWIDDKSEQLKGKRVLMYCTGGIRCEMASAYIR----SKGAGFENVFQLFGGIQRYLEQFPD------------------------------------------------------------GGFFKGKNFVFDHRISVGSSDPN--VIGTCLLCGSSFDDYSSRCRCAHCRMLVLVCDSC 306
[Close]
BLAST of mRNA_H-canaliculatus_F_contig11485.1310.1 vs. uniprot
Match: A0A2G3AWW3_CAPCH (Rhodanese-like domain-containing protein 6 n=1 Tax=Capsicum chinense TaxID=80379 RepID=A0A2G3AWW3_CAPCH)

HSP 1 Score: 177 bits (450), Expect = 1.330e-47
Identity = 96/219 (43.84%), Postives = 116/219 (52.97%), Query Frame = 1 
Query:  358 EKEAVLLDVRNVYETSIGHFSAEGVERLDPKTRQFSDLPKWVDDNADRLRGKRVLMYCTGGVRCEMASALIRRHCDADATGTEVLQLSGGIERYLEAYPHSGGEDSTRAEGAAPRAAAGLDGVEGELEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGGFFRGKNFVFDERVSVPETPAGGVAVGRCLLCQRPWDDYGSRSRCTRCRVLVLVCDSC 1014
            +K  VL+D RN+YET IG F    VE LDP+ RQ+SDLP W+D+N+++LRG  +LMYCTGG+RCEMASA IR   D       V QL GGI+RYLE +P                                                             GGFFRGKNFVFD RVSV  + +     G CLLC  P+DDY SR+RCT CR+LVLVCD+C
Sbjct:  157 DKGTVLIDARNLYETRIGKFYTPNVETLDPEIRQYSDLPSWIDNNSEKLRGNNILMYCTGGIRCEMASAYIRSKGDGYEN---VFQLYGGIQRYLEQFPD------------------------------------------------------------GGFFRGKNFVFDHRVSVGSSDSR--IWGTCLLCSSPFDDYSSRTRCTYCRMLVLVCDNC 310
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BLAST of mRNA_H-canaliculatus_F_contig11485.1310.1 vs. uniprot
Match: A0A6A6NFZ8_HEVBR (Rhodanese domain-containing protein n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6NFZ8_HEVBR)

HSP 1 Score: 181 bits (460), Expect = 1.790e-47
Identity = 100/219 (45.66%), Postives = 118/219 (53.88%), Query Frame = 1 
Query:  370 VLLDVRNVYETSIGHFSAEGVERLDPKTRQFSDLPKWVDDNADRLRGKRVLMYCTGGVRCEMASALIRRHCDADATGTE-VLQLSGGIERYLEAYPHSGGEDSTRAEGAAPRAAAGLDGVEGELEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGGFFRGKNFVFDERVSVPETPAGGVAVGRCLLCQRPWDDYGSRSRCTRCRVLVLVCDSCVAR 1023
            V+LD RN+YET IG F    VE LDP+ RQ+SDLP W+DDN+++LRGKRVLMYCTGG+RCEMASA IR        G E V QL GGI+RYLE +P                                                             GGFF+GKNFVFD R+SV  + A    +G CLLC  P+DDY SR RC+ CR+LVLVCDSC  R
Sbjct:  223 VVLDARNLYETRIGKFHMPNVETLDPEIRQYSDLPSWIDDNSEQLRGKRVLMYCTGGIRCEMASAYIRSR----GVGFENVFQLFGGIQRYLEQFPD------------------------------------------------------------GGFFKGKNFVFDHRISVGSSDAN--ILGTCLLCDMPFDDYSSRCRCSYCRMLVLVCDSCQMR 375
[Close]
BLAST of mRNA_H-canaliculatus_F_contig11485.1310.1 vs. uniprot
Match: UPI001CFBB207 (rhodanese-like domain-containing protein 6 n=1 Tax=Mangifera indica TaxID=29780 RepID=UPI001CFBB207)

HSP 1 Score: 182 bits (461), Expect = 2.100e-47
Identity = 100/224 (44.64%), Postives = 120/224 (53.57%), Query Frame = 1 
Query:  361 KEAVLLDVRNVYETSIGHFSAEGVERLDPKTRQFSDLPKWVDDNADRLRGKRVLMYCTGGVRCEMASALIRRHCDADATGTE-VLQLSGGIERYLEAYPHSGGEDSTRAEGAAPRAAAGLDGVEGELEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGGFFRGKNFVFDERVSVPETPAGGVAVGRCLLCQRPWDDYGSRSRCTRCRVLVLVCDSCVARGG 1029
            K  VLLD RN+YET IG F +  VE LDP+ RQ+SDLP W+D NA++LRGK VLMYCTGG+RCE+ASA +R    +   G E V QL GGI+RYLE +P                                                             GGFF+GKNFVFD R+SV  + A    +G CLLC   +DDY SR RCT CR+LVLVCDSC  +GG
Sbjct:  156 KSLVLLDARNLYETRIGKFHSPSVETLDPEIRQYSDLPSWIDSNAEKLRGKNVLMYCTGGIRCEVASAYVR----SKGVGFENVFQLYGGIQRYLEEFPD------------------------------------------------------------GGFFKGKNFVFDHRISVGNSDAD--IIGNCLLCDSSFDDYSSRCRCTYCRMLVLVCDSCRKQGG 313
[Close]
BLAST of mRNA_H-canaliculatus_F_contig11485.1310.1 vs. uniprot
Match: A0A1S4CFD8_TOBAC (rhodanese-like domain-containing protein 6 n=1 Tax=Nicotiana tabacum TaxID=4097 RepID=A0A1S4CFD8_TOBAC)

HSP 1 Score: 177 bits (448), Expect = 2.790e-47
Identity = 96/216 (44.44%), Postives = 117/216 (54.17%), Query Frame = 1 
Query:  370 VLLDVRNVYETSIGHFSAEGVERLDPKTRQFSDLPKWVDDNADRLRGKRVLMYCTGGVRCEMASALIRRHCDADATGTE-VLQLSGGIERYLEAYPHSGGEDSTRAEGAAPRAAAGLDGVEGELEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGGFFRGKNFVFDERVSVPETPAGGVAVGRCLLCQRPWDDYGSRSRCTRCRVLVLVCDSC 1014
            VL+D RN+YET IG F    VE LDP+ RQ+SDLP W+D+N+++LRG  +LMYCTGG+RCEMASA IR    +   G E V QL GGI+RYLE +P                                                             GGFF+GKNFVFD RVSV  + +    +G CLLC  P+DDY SRSRCT CR+LVLVCD+C
Sbjct:  164 VLMDARNLYETRIGKFYTPNVETLDPEIRQYSDLPSWIDNNSEKLRGNNILMYCTGGIRCEMASAYIR----SKGAGFENVFQLYGGIQRYLEQFPD------------------------------------------------------------GGFFKGKNFVFDHRVSVGSSDSR--ILGTCLLCNSPFDDYSSRSRCTYCRMLVLVCDNC 313
[Close]
BLAST of mRNA_H-canaliculatus_F_contig11485.1310.1 vs. uniprot
Match: A0A2P6R7K7_ROSCH (Putative transcription factor interactor and regulator Znf-B family n=4 Tax=Rosoideae TaxID=171638 RepID=A0A2P6R7K7_ROSCH)

HSP 1 Score: 182 bits (461), Expect = 2.810e-47
Identity = 103/226 (45.58%), Postives = 120/226 (53.10%), Query Frame = 1 
Query:  352 EGEKEAVLLDVRNVYETSIGHFSAEGVERLDPKTRQFSDLPKWVDDNADRLRGKRVLMYCTGGVRCEMASALIRRHCDADATGTE-VLQLSGGIERYLEAYPHSGGEDSTRAEGAAPRAAAGLDGVEGELEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGGFFRGKNFVFDERVSVPETPAGGVAVGRCLLCQRPWDDYGSRSRCTRCRVLVLVCDSCVARG 1026
            E  +E VLLD RN+YET IG F    VE LDP  RQ+SDLP W+DDN+D+L+GK VLMYCTGG+RCEMASA IR    +   G E V QL GGI+RYLE +P                                                             GGFFRGKNFVFD R+SV  + A    +G CLLC   +DDY SR RCT CR+LVLVCDSC  +G
Sbjct:  159 EHNRELVLLDARNLYETRIGKFHPPNVETLDPGIRQYSDLPSWIDDNSDQLQGKSVLMYCTGGIRCEMASAYIR----SKGAGFENVFQLYGGIQRYLEQFPD------------------------------------------------------------GGFFRGKNFVFDHRISVGSSDAN--ILGACLLCGTSFDDYSSRLRCTYCRMLVLVCDSCQRKG 318
[Close]
BLAST of mRNA_H-canaliculatus_F_contig11485.1310.1 vs. uniprot
Match: A0A6N2KVT1_SALVM (Rhodanese domain-containing protein n=1 Tax=Salix viminalis TaxID=40686 RepID=A0A6N2KVT1_SALVM)

HSP 1 Score: 176 bits (446), Expect = 3.820e-47
Identity = 97/220 (44.09%), Postives = 117/220 (53.18%), Query Frame = 1 
Query:  358 EKEAVLLDVRNVYETSIGHFSAEGVERLDPKTRQFSDLPKWVDDNADRLRGKRVLMYCTGGVRCEMASALIRRHCDADATGTE-VLQLSGGIERYLEAYPHSGGEDSTRAEGAAPRAAAGLDGVEGELEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGGFFRGKNFVFDERVSVPETPAGGVAVGRCLLCQRPWDDYGSRSRCTRCRVLVLVCDSC 1014
            +K  VLLD RN+YET IG F    V+ LDP+ RQ+SDLP W+DDN+++LRGK VLMYCTGG+RCEMASA IR    +   G E V QL GGI+RYLE +P                                                             GGFF+GKNFVFD R+SV  +      +G CLLC   +DDY SR RC+ CR+LVLVCDSC
Sbjct:  163 DKGLVLLDARNLYETRIGKFDMPNVDTLDPRIRQYSDLPSWIDDNSEQLRGKNVLMYCTGGIRCEMASAYIR----SKGAGFENVFQLYGGIQRYLEQFPD------------------------------------------------------------GGFFKGKNFVFDHRISVGSSDTN--ILGTCLLCGLSFDDYSSRCRCSYCRMLVLVCDSC 316
[Close]
BLAST of mRNA_H-canaliculatus_F_contig11485.1310.1 vs. uniprot
Match: A0A5D2S2U1_GOSMU (Rhodanese domain-containing protein n=38 Tax=Malvoideae TaxID=214907 RepID=A0A5D2S2U1_GOSMU)

HSP 1 Score: 180 bits (456), Expect = 4.350e-47
Identity = 99/220 (45.00%), Postives = 117/220 (53.18%), Query Frame = 1 
Query:  358 EKEAVLLDVRNVYETSIGHFSAEGVERLDPKTRQFSDLPKWVDDNADRLRGKRVLMYCTGGVRCEMASALIRRHCDADATGTE-VLQLSGGIERYLEAYPHSGGEDSTRAEGAAPRAAAGLDGVEGELEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGGFFRGKNFVFDERVSVPETPAGGVAVGRCLLCQRPWDDYGSRSRCTRCRVLVLVCDSC 1014
            +K+ VLLD RN+YET IG F A  VE LDP  RQ+SDLP W+DDN++ LRGK VLMYCTGG+RCEMASA IR    +   G E V QL GGI+RYLE +P                                                             GGFFRGKNFVFD R+SV  +      +G CL+C   +D+Y SR RCT CR+LVLVCDSC
Sbjct:  151 DKQLVLLDARNLYETRIGKFHAPSVETLDPGIRQYSDLPSWIDDNSELLRGKHVLMYCTGGIRCEMASAYIR----SKGAGFENVFQLYGGIQRYLEQFPD------------------------------------------------------------GGFFRGKNFVFDHRISVGSSDTS--IMGACLICGSSYDNYSSRCRCTHCRILVLVCDSC 304
[Close]
BLAST of mRNA_H-canaliculatus_F_contig11485.1310.1 vs. uniprot
Match: A0A6J5XQ31_PRUAR (Rhodanese domain-containing protein n=12 Tax=Prunus TaxID=3754 RepID=A0A6J5XQ31_PRUAR)

HSP 1 Score: 181 bits (460), Expect = 4.860e-47
Identity = 103/229 (44.98%), Postives = 122/229 (53.28%), Query Frame = 1 
Query:  346 TAEGEKEAVLLDVRNVYETSIGHFSAEGVERLDPKTRQFSDLPKWVDDNADRLRGKRVLMYCTGGVRCEMASALIRRHCDADATGTE-VLQLSGGIERYLEAYPHSGGEDSTRAEGAAPRAAAGLDGVEGELEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGGFFRGKNFVFDERVSVPETPAGGVAVGRCLLCQRPWDDYGSRSRCTRCRVLVLVCDSCVARGG 1029
            + E ++E VLLD RN+YET IG F    VE LDP  RQ+SDLP W+DDN+D+L+GK VLMYCTGG+RCEMASA IR    +   G E V QL GGI+RYLE +P                                                             GGFFRGKNFVFD R+SV  + A    +G CLLC   +DDY SR RC+ CR+LVLVCDSC  R G
Sbjct:  161 STERDRELVLLDARNLYETRIGKFHTPDVETLDPGIRQYSDLPSWIDDNSDQLQGKNVLMYCTGGIRCEMASAYIR----SKGAGYENVFQLFGGIQRYLEQFPD------------------------------------------------------------GGFFRGKNFVFDHRISVASSDAN--ILGTCLLCGVSFDDYSSRLRCSYCRMLVLVCDSCQQRKG 323
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11485.1310.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000B775A823.270e-4945.66rhodanese-like domain-containing protein 6 isoform... [more]
A0A8J4QWW2_9ROSI1.080e-4843.22Rhodanese domain-containing protein n=1 Tax=Castan... [more]
A0A2G3AWW3_CAPCH1.330e-4743.84Rhodanese-like domain-containing protein 6 n=1 Tax... [more]
A0A6A6NFZ8_HEVBR1.790e-4745.66Rhodanese domain-containing protein n=1 Tax=Hevea ... [more]
UPI001CFBB2072.100e-4744.64rhodanese-like domain-containing protein 6 n=1 Tax... [more]
A0A1S4CFD8_TOBAC2.790e-4744.44rhodanese-like domain-containing protein 6 n=1 Tax... [more]
A0A2P6R7K7_ROSCH2.810e-4745.58Putative transcription factor interactor and regul... [more]
A0A6N2KVT1_SALVM3.820e-4744.09Rhodanese domain-containing protein n=1 Tax=Salix ... [more]
A0A5D2S2U1_GOSMU4.350e-4745.00Rhodanese domain-containing protein n=38 Tax=Malvo... [more]
A0A6J5XQ31_PRUAR4.860e-4744.98Rhodanese domain-containing protein n=12 Tax=Prunu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig11485contigH-canaliculatus_F_contig11485:512..4203 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score184.1
Seed ortholog evalue1.5e-43
Seed eggNOG ortholog57918.XP_004302282.1
EggNOG free text desc.Rhodanese-like domain-containing protein
EggNOG OGs37HI1@33090,3GABF@35493,4JFY4@91835,KOG2551@1,KOG2551@2759
COG Functional cat.E
Best tax levelfabids
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRhodanese-like domain
Ec32 orthologEc-16_003090.1
Exons5
Model size1371
Cds size1371
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig11485.1310.1prot_H-canaliculatus_F_contig11485.1310.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig11485 512..4203 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928834.945517-CDS-H-canaliculatus_F_contig11485:511..9021622928834.945517-CDS-H-canaliculatus_F_contig11485:511..902Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11485 512..902 -
1696845582.5678475-CDS-H-canaliculatus_F_contig11485:511..9021696845582.5678475-CDS-H-canaliculatus_F_contig11485:511..902Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11485 512..902 -
1622928834.957168-CDS-H-canaliculatus_F_contig11485:1494..15961622928834.957168-CDS-H-canaliculatus_F_contig11485:1494..1596Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11485 1495..1596 -
1696845582.5787497-CDS-H-canaliculatus_F_contig11485:1494..15961696845582.5787497-CDS-H-canaliculatus_F_contig11485:1494..1596Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11485 1495..1596 -
1622928834.9664195-CDS-H-canaliculatus_F_contig11485:2239..26111622928834.9664195-CDS-H-canaliculatus_F_contig11485:2239..2611Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11485 2240..2611 -
1696845582.58922-CDS-H-canaliculatus_F_contig11485:2239..26111696845582.58922-CDS-H-canaliculatus_F_contig11485:2239..2611Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11485 2240..2611 -
1622928834.975618-CDS-H-canaliculatus_F_contig11485:3146..32331622928834.975618-CDS-H-canaliculatus_F_contig11485:3146..3233Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11485 3147..3233 -
1696845582.5981276-CDS-H-canaliculatus_F_contig11485:3146..32331696845582.5981276-CDS-H-canaliculatus_F_contig11485:3146..3233Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11485 3147..3233 -
1622928834.9854124-CDS-H-canaliculatus_F_contig11485:3784..42031622928834.9854124-CDS-H-canaliculatus_F_contig11485:3784..4203Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11485 3785..4203 -
1696845582.6065137-CDS-H-canaliculatus_F_contig11485:3784..42031696845582.6065137-CDS-H-canaliculatus_F_contig11485:3784..4203Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11485 3785..4203 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig11485.1310.1

>prot_H-canaliculatus_F_contig11485.1310.1 ID=prot_H-canaliculatus_F_contig11485.1310.1|Name=mRNA_H-canaliculatus_F_contig11485.1310.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=457bp
KNKTNLVVQGAGLSHLRGGRHVSPQEFHRLLQAQEDIAARRRPSRGTHRN
RVDADDGREGMGGGVTLARASNTAANFAADVGDDDGEGKRSCLVEERGRG
GAGDEAAARGTGPPVTAEGEKEAVLLDVRNVYETSIGHFSAEGVERLDPK
TRQFSDLPKWVDDNADRLRGKRVLMYCTGGVRCEMASALIRRHCDADATG
TEVLQLSGGIERYLEAYPHSGGEDSTRAEGAAPRAAAGLDGVEGELEEGE
AAGGCGGKGGEASSRRGAGAPVGGAGEARGGFFRGKNFVFDERVSVPETP
AGGVAVGRCLLCQRPWDDYGSRSRCTRCRVLVLVCDSCVARGGRGVAGQG
GEASTPPAPLPRVPEPPRRKHGIPASRGHPVGGSRSPLLVPTPSATTATP
STTASPSARSPRSEGRRTAAAATVGSKCPHSMLSRDGVERVGVVEGSGLA
AAAAAAA
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mRNA from alignment at H-canaliculatus_F_contig11485:512..4203-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig11485.1310.1 ID=mRNA_H-canaliculatus_F_contig11485.1310.1|Name=mRNA_H-canaliculatus_F_contig11485.1310.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3692bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11485:512..4203- (Hapterophycus canaliculatus Oshoro5f female)
AAAAACAAAACGAACTTGGTTGTGCAGGGAGCGGGGCTTTCTCACCTGCG
GGGCGGCAGGCATGTGTCTCCGCAGGAATTCCACCGCTTGCTCCAGGCGC
AGGAAGATATCGCAGCACGGCGACGGCCGTCGCGGGGAACGCACCGTAAC
CGCGTCGACGCCGACGACGGGAGGGAAGGCATGGGAGGAGGTGTGACGCT
GGCGAGAGCATCGAACACCGCCGCCAACTTCGCTGCCGATGTCGGTGACG
ACGATGGCGAGGGCAAGCGAAGTTGCCTGGTGGAGGAGCGGGGAAGGGGG
GGTGCGGGTGACGAGGCCGCTGCTCGGGGGACGGGACCGCCGGTGACAGC
GGAAGGGGAGAAGGAGGCGGTGCTGCTGGACGTGCGGAACGTGTACGAGA
CCAGCATAGGGCATTTCAGGTGCCCCCTTTCCCGCTCGATCGCTCGGTTT
TCGCTCGATCGCTCGATTTTCTTTTTTTCTTGCTCTTTTATGTGGTGCAG
TATATGCTCGGCGTGCTGTTTTTTCGTTGTGCATGTGTGTGTGAGTGTGT
GTATTTGTGCGTGTGTGTATTTGTGCGTGTGTTTTTTTCGTCTCGTCAAC
CCTTTTTCTCTCGTGTATATGTCTTTCTTTTCCTTTCGAACATTTGCCTC
TGCCGCGGGGCGAGTTTTGACGAGCCACGAACCGATTTCTCGCGAAGAAG
ATCGTCTCCGCCGTTCGCTCGCACACGCGCGCGCGCGCGTCCCGTGTTCC
GCCCGGGCATGGCAGCAGATGAAGCATACGCTGTGCCCGCCTGTATTGGG
CACCGAGGGCTCTCGTCCCGTTGACGCAGGTGAAGACAGACCTAAGCAGT
TTTCTCGCGCCGCACACGATGCTCTCGTCCCCTCTCCAAAAACGCTTCTG
AGGTCCCCGCTTCCGCCGCACGGCACGATTCCTCACGCTCGTCTCGGCGC
ATCGGCGCCACAAACATCAGCGCAGAGGGAGTGGAAAGGCTCGACCCCAA
GACTCGTCAGTTCAGCGACCTGCCGAAGTGGGTGGACGACAACGCGGACC
GTCTAAGGTGGGCGAGCCGGGTGAGGCAGGGGGTAGGAGCTGCAGAGCCA
CGTGCGTCGGTCGAACGGGCAGAAGTCGGGCGTGAAACCGACGGATTTTA
GAACTCCCAGTCTGTCGCTTCGGGCGTGGCGGGACGTGCTTTTCAAAGAA
ATCTTCGGTGTTTGAGACGACGACGTGGGTGAACACTCGTTTACGGCACC
TTGCGTCGTTGGCGCCACCTACGTGCCGTGGCCCTGCTTCCTCGAGAAGA
TATCCCAACGCATCGTCGAAGGCCCCCTCCCCTTCGCCGACTCTCGGTAT
GGTTCACATTTCTGCTGCATCCGGGCAACCACGGACGTGGGGCAACAGCT
GTCGTTTCTTAAAAAAATCTTGGGTTCATCCGGCGGGTGAGTCGAGCAAC
GCCTGGACGGTCCCAGAAGCACGACGTTTCTCCACGCGCACACGCGTGGG
CGTGTGGCCAATCATAGCCACACCCATTTGCTGAGGACGCAGCAACGCCC
GCCCCGTTGAGAATCCTCTCACACCCGAACACACCCGCGCAGGGGGAAAA
GGGTGCTGATGTACTGCACGGGGGGAGTTCGGTGCGAGATGGCGTCGGCG
CTTATCCGGAGGCACTGCGACGCCGACGCGACCGGGACAGAGGTCCTGCA
GCTCTCCGGCGGCATCGAACGCTACCTAGAGGCCTACCCCCACAGCGGGG
GAGAAGATTCGACCCGGGCCGAGGGAGCCGCGCCAAGAGCTGCCGCGGGT
TTGGACGGGGTGGAGGGAGAACTGGAGGAGGGAGAGGCAGCCGGCGGGTG
CGGCGGCAAAGGCGGCGAGGCTTCCTCGCGGCGGGGCGCGGGGGCTCCGG
TGGGAGGGGCGGGGGAGGCGCGGGGGGGGTTCTTCCGCGGCAAGAACTTC
GTGTTTGACGAGAGGTGCGACAGCGGTGGTGGGCCGTTGCCACGGGGCGG
TTGACTGTGGCGGCTTCGCGTCGGTGGTGCGTACCTGCCTAGACTCGTGA
CGTCGTCTTCTTGTCCGTCTTTTCGGCGATGCCGTTGGTCCTGTCAACGG
GGGGGATCTGCTTGGGAGTTTTTCTGTTCGGGCGTGGCTGGTGTCGAAGG
ACGCCACCGCGCTCGGGATCAACAACTCTACGGCGGCACCCGAACTTTCC
CAGCCCTGTTTCGCGCGGCGGTGGAGAAGTTCGAACGATGGTCGTCGCGG
CCCGGACTCTCACAGCGCACACGGCAGATGACACGCTGCACATGCGCTTC
TTCGCCCAATCTTGCAGTCAACCCCGAAGTCAACTCCGAAAACCTCTTCA
AGCAGCTTTGAATGATGGGCTCGTTTTCACTTGTCATGTCGCTTGGGTCT
CCCCCCCCGCCAGAAGTCCACAGACCGCAAGGGAGGGGGGGTACGGGATG
GAGTTGTTCGACTTCATCGGGGTGTGCAGATTTCAGGATTTCGTTGGTGG
CACCAGGGCCGTCAGCCCGTAGCCCTTTGCATCCGGCAGAGATGGGACGC
GGCTCGGTCTTCCGCAAGTCACCGCTCCGTCTCGTCCTCCTCGCCATGTT
ATTCCAGGGTGTCGGTACCAGAAACTCCGGCGGGCGGGGTGGCAGTAGGG
CGTTGCCTCTTGTGCCAACGACCTTGGGACGACTACGGCAGCCGCTCCAG
ATGCACCAGGCAGGTTTGGTTTGTGTGCGAGTACCGGGTTGTGTTGATTC
GGGGAACGAAGGGTTTCGCTGTCTTTCGGGGAAGATTGGGGGGACGGCAG
AGCGGGAGACTACAGCATGCGGAAAGCGATTTTTTCCGTCGACGCGGTCT
CTCGTGCGGGGTAAAATAGTCGTCGGATCACATCCGGATGTTTGGAGAAA
AACCTGGGCATCGAGGAGTTTATCTTTCTCTCTCTATCTCTCTCTCTCTC
TCTCGCCGAAACGAAAGATGTAGAAAAAATGCTCCTGAGTCGCCATCTAT
CGATTTTCTAGTCTCAGCGGGGGGTATTCTTTTGGTGTTACTGTTTTTGA
TTATTTCTTGTTAAGAAGATGTAGACAACAACTCCGTTGAGGCCGCGGCT
GCCTCCAGGCCATCCTCCCGAAGACGTCCACAGCAGCAGCGGCGCTGACA
CGCCGTTGCCTCCGGAAGAACACGCAGGGGGTCGACCCAGAGGACCGCTG
ATCCCCTGCTGCTTCCGGCAGCTTTCCTTCCACCGCTCGCTCGACGCCTG
CTACAGCGCGTCTCACCACCTCCCCCCCCTGCCCCCGCGTGCGCGGAGCA
GGTGCCGCGTGCTCGTCCTGGTGTGCGACAGTTGCGTCGCGCGCGGCGGC
CGCGGGGTCGCAGGACAAGGCGGAGAGGCCTCGACGCCGCCGGCCCCGCT
GCCGAGGGTCCCGGAGCCGCCCCGGAGGAAACACGGAATCCCCGCCAGCC
GCGGCCACCCCGTCGGAGGATCACGCTCCCCTCTGCTGGTACCGACGCCG
TCGGCGACAACAGCAACGCCTTCGACTACCGCATCGCCTTCTGCACGTTC
GCCACGGTCGGAAGGCCGCAGAACCGCCGCGGCGGCAACGGTGGGGTCGA
AGTGCCCACACAGCATGTTGTCGAGGGACGGGGTGGAGCGCGTGGGGGTC
GTAGAGGGTTCGGGGCTCGCGGCGGCGGCGGCGGCGGCGGCG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11485:512..4203-

>mRNA_H-canaliculatus_F_contig11485.1310.1 ID=mRNA_H-canaliculatus_F_contig11485.1310.1|Name=mRNA_H-canaliculatus_F_contig11485.1310.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2742bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11485:512..4203- (Hapterophycus canaliculatus Oshoro5f female)
AAAAACAAAACGAACTTGGTTGTGCAGGGAGCGGGGCTTTCTCACCTGCG
GGGCGGCAGGCATGTGTCTCCGCAGGAATTCCACCGCTTGCTCCAGGCGC
AGGAAGATATCGCAGCACGGCGACGGCCGTCGCGGGGAACGCACCGTAAC
CGCGTCGACGCCGACGACGGGAGGGAAGGCATGGGAGGAGGTGTGACGCT
GGCGAGAGCATCGAACACCGCCGCCAACTTCGCTGCCGATGTCGGTGACG
ACGATGGCGAGGGCAAGCGAAGTTGCCTGGTGGAGGAGCGGGGAAGGGGG
GGTGCGGGTGACGAGGCCGCTGCTCGGGGGACGGGACCGCCGGTGACAGC
GGAAGGGGAGAAGGAGGCGGTGCTGCTGGACGTGCGGAACGTGTACGAGA
CCAGCATAGGGCATTTCAGAAAAACAAAACGAACTTGGTTGTGCAGGGAG
CGGGGCTTTCTCACCTGCGGGGCGGCAGGCATGTGTCTCCGCAGGAATTC
CACCGCTTGCTCCAGGCGCAGGAAGATATCGCAGCACGGCGACGGCCGTC
GCGGGGAACGCACCGTAACCGCGTCGACGCCGACGACGGGAGGGAAGGCA
TGGGAGGAGGTGTGACGCTGGCGAGAGCATCGAACACCGCCGCCAACTTC
GCTGCCGATGTCGGTGACGACGATGGCGAGGGCAAGCGAAGTTGCCTGGT
GGAGGAGCGGGGAAGGGGGGGTGCGGGTGACGAGGCCGCTGCTCGGGGGA
CGGGACCGCCGGTGACAGCGGAAGGGGAGAAGGAGGCGGTGCTGCTGGAC
GTGCGGAACGTGTACGAGACCAGCATAGGGCATTTCAGCGCAGAGGGAGT
GGAAAGGCTCGACCCCAAGACTCGTCAGTTCAGCGACCTGCCGAAGTGGG
TGGACGACAACGCGGACCGTCTAAGCGCAGAGGGAGTGGAAAGGCTCGAC
CCCAAGACTCGTCAGTTCAGCGACCTGCCGAAGTGGGTGGACGACAACGC
GGACCGTCTAAGGGGGAAAAGGGTGCTGATGTACTGCACGGGGGGAGTTC
GGTGCGAGATGGCGTCGGCGCTTATCCGGAGGCACTGCGACGCCGACGCG
ACCGGGACAGAGGTCCTGCAGCTCTCCGGCGGCATCGAACGCTACCTAGA
GGCCTACCCCCACAGCGGGGGAGAAGATTCGACCCGGGCCGAGGGAGCCG
CGCCAAGAGCTGCCGCGGGTTTGGACGGGGTGGAGGGAGAACTGGAGGAG
GGAGAGGCAGCCGGCGGGTGCGGCGGCAAAGGCGGCGAGGCTTCCTCGCG
GCGGGGCGCGGGGGCTCCGGTGGGAGGGGCGGGGGAGGCGCGGGGGGGGT
TCTTCCGCGGCAAGAACTTCGTGTTTGACGAGAGGGGGAAAAGGGTGCTG
ATGTACTGCACGGGGGGAGTTCGGTGCGAGATGGCGTCGGCGCTTATCCG
GAGGCACTGCGACGCCGACGCGACCGGGACAGAGGTCCTGCAGCTCTCCG
GCGGCATCGAACGCTACCTAGAGGCCTACCCCCACAGCGGGGGAGAAGAT
TCGACCCGGGCCGAGGGAGCCGCGCCAAGAGCTGCCGCGGGTTTGGACGG
GGTGGAGGGAGAACTGGAGGAGGGAGAGGCAGCCGGCGGGTGCGGCGGCA
AAGGCGGCGAGGCTTCCTCGCGGCGGGGCGCGGGGGCTCCGGTGGGAGGG
GCGGGGGAGGCGCGGGGGGGGTTCTTCCGCGGCAAGAACTTCGTGTTTGA
CGAGAGGGTGTCGGTACCAGAAACTCCGGCGGGCGGGGTGGCAGTAGGGC
GTTGCCTCTTGTGCCAACGACCTTGGGACGACTACGGCAGCCGCTCCAGA
TGCACCAGGGTGTCGGTACCAGAAACTCCGGCGGGCGGGGTGGCAGTAGG
GCGTTGCCTCTTGTGCCAACGACCTTGGGACGACTACGGCAGCCGCTCCA
GATGCACCAGGTGCCGCGTGCTCGTCCTGGTGTGCGACAGTTGCGTCGCG
CGCGGCGGCCGCGGGGTCGCAGGACAAGGCGGAGAGGCCTCGACGCCGCC
GGCCCCGCTGCCGAGGGTCCCGGAGCCGCCCCGGAGGAAACACGGAATCC
CCGCCAGCCGCGGCCACCCCGTCGGAGGATCACGCTCCCCTCTGCTGGTA
CCGACGCCGTCGGCGACAACAGCAACGCCTTCGACTACCGCATCGCCTTC
TGCACGTTCGCCACGGTCGGAAGGCCGCAGAACCGCCGCGGCGGCAACGG
TGGGGTCGAAGTGCCCACACAGCATGTTGTCGAGGGACGGGGTGGAGCGC
GTGGGGGTCGTAGAGGGTTCGGGGCTCGCGGCGGCGGCGGCGGCGGCGGC
GGTGCCGCGTGCTCGTCCTGGTGTGCGACAGTTGCGTCGCGCGCGGCGGC
CGCGGGGTCGCAGGACAAGGCGGAGAGGCCTCGACGCCGCCGGCCCCGCT
GCCGAGGGTCCCGGAGCCGCCCCGGAGGAAACACGGAATCCCCGCCAGCC
GCGGCCACCCCGTCGGAGGATCACGCTCCCCTCTGCTGGTACCGACGCCG
TCGGCGACAACAGCAACGCCTTCGACTACCGCATCGCCTTCTGCACGTTC
GCCACGGTCGGAAGGCCGCAGAACCGCCGCGGCGGCAACGGTGGGGTCGA
AGTGCCCACACAGCATGTTGTCGAGGGACGGGGTGGAGCGCGTGGGGGTC
GTAGAGGGTTCGGGGCTCGCGGCGGCGGCGGCGGCGGCGGCG
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