mRNA_H-canaliculatus_F_contig101.126.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig101.126.1
Unique NamemRNA_H-canaliculatus_F_contig101.126.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig101.126.1 vs. uniprot
Match: D8LKH0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKH0_ECTSI)

HSP 1 Score: 432 bits (1110), Expect = 2.620e-145
Identity = 237/421 (56.29%), Postives = 288/421 (68.41%), Query Frame = 1
Query:    1 LVPPPVFSLV-FRSIGDHNFHALVKEAYFAFEALSQHPYGFTSYFHGHHPELLCIDGCAKIATDNVSTAQFEVARMDRHVDTDLQHVLLKMSMMSKMVFRSRLRWVVKAAPICGPHNRISNSMRRTEREKMAAERSPDSGDVGELMLALGDGAISDISNKTLGDLKNIYRLCFSGGKSISRCSNKAAFVEGLEDLWKSAGVGNGGDR*SKLFICRPSGTTAGVGGLFAPDWVMCAHVFQLTVESPADAVDIMAHLLAQPCLLITDVPCMMAPIAEKRQPGLLENGGALPRNAEGEVSLAGMQPSGAHAHEFPDKHHLKLPPRGFPFALASTTSGADSIDKVYAVFASTETSLPLQAHVDFHALLRRAAEAAEENRQLKAVASAGGVFDASSSSQRMCELAERTLKSLHADGIYAMTLFELV 1260
            LVPP    L   RSI DHNF   +KE Y+AFEAL+QHPY F SY  G  PE++ IDGCAKI TDN  T+QF++AR +RHVDTD QH LLK+SM+SKMVF  R+R+V++AAP  G  NRISN M RT R KMA   SP +GD+GEL+ ALGD AI+D+S+K+  DLKNIY LCF+G K ISR  NK A V+  ++LW S   G  G+R SKLFI +  GTTAGV G F PD VM A+VFQ+  ES ADAVD+ AH L  P L+ITD+PCM+APIAE+  P LLEN G LPR+A+G VSL  +Q  GAHAHEFPD+H +K P   FP    S+ +    +D +YAV+A    SLP Q HV+F ALL+R+A +A              V D SS S+R C LAE  L SLH  G YAMTLFE+V
Sbjct:   22 LVPPVTCPLAGSRSIADHNFIETLKECYYAFEALTQHPYEFKSYEWGRFPEIVTIDGCAKINTDNTDTSQFQIARTERHVDTDHQHQLLKISMISKMVFPKRVRFVLEAAPTFGFSNRISNLMFRTARGKMADPGSPQTGDLGELVKALGDDAITDLSSKSFADLKNIYTLCFAGRKGISRFRNKDALVQCFQELWISRDGGGAGERCSKLFIGKQPGTTAGVEGAFTPDGVMYANVFQIAAESAADAVDVSAHFLVPPSLMITDIPCMLAPIAERLHPWLLENEGRLPRDADGVVSLPALQHLGAHAHEFPDEHSVKFPTESFPSPPPSSATDV-VVDNIYAVYADANFSLPAQPHVNFGALLQRSARSATAE-----------VGDTSSLSKRFCTLAENQLISLHQQGCYAMTLFEVV 430          
BLAST of mRNA_H-canaliculatus_F_contig101.126.1 vs. uniprot
Match: A0A6H5KB28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB28_9PHAE)

HSP 1 Score: 301 bits (771), Expect = 2.130e-96
Identity = 155/251 (61.75%), Postives = 189/251 (75.30%), Query Frame = 1
Query:   34 RSIGDHNFHALVKEAYFAFEALSQHPYGFTSYFHGHHPELLCIDGCAKIATDNVSTAQFEVARMDRHVDTDLQHVLLKMSMMSKMVFRSRLRWVVKAAPICGPHNRISNSMRRTEREKMAAERSPDSGDVGELMLALGDGAISDISNKTLGDLKNIYRLCFSGGKSISRCSNKAAFVEGLEDLWKSAGVGNGGDR*SKLFICRPSGTTAG-VGGLFAPDWVMCAHVFQLTVESPADAVDIMAHLLAQPCLL 783
            RSI DHNFHAL+K+AYFAFEAL Q P+GF S+  G   E+ CIDGCAKI TD+VS  QF++AR +R VD DL + +LKMS++SKM F +RLRWV++AAPI GPHNR+SN M RT R +MA   SP++GD GELM ALGDGAI+D+S+K + DL+NIYRLCF  GK IS    K   V+ L+ LW+SAG    G+R SKLFI +PSG+TAG V GLF  D VM AHVFQ+T ESPADAVD++ HLL   C L
Sbjct:   60 RSIEDHNFHALIKQAYFAFEALVQ-PFGFVSFMRGRWREIFCIDGCAKICTDDVSREQFDIARAERDVDADLHNEMLKMSIISKMGFNARLRWVLEAAPIFGPHNRVSNVMYRTARGRMAPVGSPENGDAGELMRALGDGAITDLSDKPVSDLENIYRLCFIDGKGISMYPTKELLVQCLQKLWESAGADGEGERCSKLFIGKPSGSTAGGVEGLFTGDRVMVAHVFQITAESPADAVDMLVHLLVTYCTL 309          
BLAST of mRNA_H-canaliculatus_F_contig101.126.1 vs. uniprot
Match: A0A6H5JEL5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEL5_9PHAE)

HSP 1 Score: 276 bits (707), Expect = 2.150e-87
Identity = 144/252 (57.14%), Postives = 174/252 (69.05%), Query Frame = 1
Query:   34 RSIGDHNFHALVKEAYFAFEALSQHPYGFTSYFHGHHPELLCIDGCAKIATDNVSTAQFEVARMDRHVDTDLQHVLLKMSMMSKMVFRSRLRWVVKAAPICGPHNRISNSMRRTEREKMAAERSPDSGDVGELMLALGDGAISDISNKTLGDLKNIYRLCFSGGKSISRCSNKAAFVEGLEDLWKSAGVGNGGDR*SKLFICRPSGTTAGVGGLFAPDWVMCAHVFQLTVESPADAVDIMAHLLAQPCLLIT 789
             SI DH FHAL+KEAYFAFEAL QHP+GF S+ HG  PE+ CIDGCAKI TD+VS  QF++AR++R VD +L + +LKMSM+SKMVF + LRWV++AAPI GP                    SP+ GD GELM ALGDGAI+D+S+K+ GDLKNIYRLCF  GK IS    K    + L+ LW+ A     G+R  KLFI +PSG+TAGV GLF  D VM AHVFQ+T ESPADAVD++ HL    C L T
Sbjct:   13 NSIEDHKFHALIKEAYFAFEALVQHPFGFVSFMHGRWPEIFCIDGCAKICTDDVSREQFDIARVERDVDANLYNEMLKMSMISKMVFNAHLRWVLEAAPIFGP----------------TPVGSPEDGDAGELMRALGDGAITDLSDKSFGDLKNIYRLCFPDGKGISMYPTKELLAQCLQKLWELAD--GEGERCLKLFIGKPSGSTAGVEGLFTGDGVMAAHVFQITAESPADAVDMLVHLPVSYCTLST 246          
BLAST of mRNA_H-canaliculatus_F_contig101.126.1 vs. uniprot
Match: A0A6H5JUN3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUN3_9PHAE)

HSP 1 Score: 258 bits (660), Expect = 1.730e-78
Identity = 158/351 (45.01%), Postives = 209/351 (59.54%), Query Frame = 1
Query:  274 MMSKMVFRSRLRWVVKAAPICGPHNRISNSMRRTEREKMAAERSPDSGDVGELMLALGDGAISDISNKTLGDLKNIYRLCFSGGKSIS---------------RCSNKAAFVEGLEDLWKSAGVGNGGDR*SKLFICRPSGTTAGVGGLFAPDWVMCAHVFQLTVESPADAVDIMAHLLAQPCLLITD-VPCMMAPIAEKRQPGLLENGGALPRNAEGEVSLAGMQPSGAHAHEFPDKHHLKLPPRGFPF----ALASTTSGADSIDKVYAVFASTETSLPLQAHVDFHALLRRAAEAAEENRQLKAVASAGGVFDASSSSQRMCELAERTLKSLHADGIYAMTLFELVFL 1266
            M+SKMVF  RLRWVV+AAP   PHNRISN M RT R K+A E +P+ GD G+L+ ALGDGAI+D+SNKT  DL+NIYRLC+     +S               R       ++ L   W+SAG+G+  +R S++FI +PSG T GV GLF  D V+ A VFQ+  ES AD VDI++H  +   +      P        +  P     GGALPRNAE +V L  +Q  GA A+EFPD + +++PP  FP     A AS    A S+  VYA +A  +    +Q H+DF ALL+RA +  E NR++ A        D SSS++R+ +LAE TLKSLH  G +AMTLFE+V +
Sbjct:    1 MISKMVFDRRLRWVVEAAPTVSPHNRISNVMHRTARGKLAPEGAPERGDAGDLLRALGDGAITDLSNKTKDDLQNIYRLCYPPPARVSASDFWSRQRTRPCVQRFPPLELLIQCLTRPWESAGIGDR-ERCSRIFIGKPSGLTTGVEGLFGTDGVLYALVFQVARESAADGVDIISHRQSSTTMPADHGYPMHDCTHCREASPRSTPGGGALPRNAELQVCLKELQHVGARAYEFPDLNEVRVPPMEFPSPTTTASASDAHPAQSVPTVYAAYAVGQPMPGVQPHLDFRALLQRACDVVERNREVHATEGNASGVDWSSSAKRIADLAESTLKSLHKQGWHAMTLFEVVLM 350          
BLAST of mRNA_H-canaliculatus_F_contig101.126.1 vs. uniprot
Match: A0A6H5K5W4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5W4_9PHAE)

HSP 1 Score: 261 bits (668), Expect = 1.300e-77
Identity = 162/413 (39.23%), Postives = 217/413 (52.54%), Query Frame = 1
Query:   34 RSIGDHNFHALVKEAYFAFEALSQHPYGFTSYFHGHHPELLCIDGCAKIATDNVSTAQFEVARMDRHVDTDLQHVLLKMSMMSKMVFRSRLRWVVKAAPICGPHNRISNSMRRTEREKMAAERSPDSGDVGELMLALGDGAISDISNKTLGDLKNIYRLCFSGGKSISRCSNKAAFVEGLEDLWKSAGVGNGGDR*SKLFICRPSGTTAGVGGLFAPDWVMCAHVFQLTVESPADAVDIMAHLLAQPCLLITDVPCMMAPIAEKRQPGLLENGGALPRNAEGEVSLAGMQPSGAHAHEFPDKHHLKLPPRGFPFALASTTSGADSIDK----VYAVFASTETSLPLQAHVDFHALLRRAAEAAEENRQLKAVASAGGVFDASSSSQRMCELAERTLKSLHADGIYAMTLFELV 1260
            + I DHNF A +++AYFAFE L+QHP+ F SY +GH PEL+ IDGCAK+ +D+ + A F+ AR +R VD DL H LLKMSM+SKM                                                                                          F+   + LW+ A   +  DR SK+FI RPSG TAGV GLF PD V+ +H+ Q+    P          +A P +L+TD+PCM+AP AEK  PGLL+NGGALPRNA+G+VSL G+Q  GA  +++PD+H +++PP G  F  AS +S A  +D+    VY  FA T  S P+Q H+DF ALL+ A +  E NRQ++      G  D SSS +R+ ELAE +L+ LH  G YA+ LFE+V
Sbjct:    5 KLIRDHNFIAAIRDAYFAFEGLTQHPFDFVSYLYGHCPELMSIDGCAKVISDDATLAHFDQARQERLVDIDLGHQLLKMSMISKM----------------------------------------------------------------------------------------EDFIGCFQQLWRFALGPDEADRCSKVFIVRPSGKTAGVEGLFTPDGVVNSHLLQVVDLEPLWTPCGTWRAIATPSVLVTDIPCMVAPNAEKNVPGLLQNGGALPRNAKGQVSLPGLQHIGARGYDYPDRHEVRVPPTGCAFVSASASSTAPPVDQLRYNVYDAFA-TALSGPVQPHIDFSALLKHAGDVVERNRQVQ------GTDDWSSSPKRISELAETSLRYLHQQGCYALNLFEVV 322          
BLAST of mRNA_H-canaliculatus_F_contig101.126.1 vs. uniprot
Match: A0A6H5KB33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB33_9PHAE)

HSP 1 Score: 242 bits (618), Expect = 1.010e-74
Identity = 125/225 (55.56%), Postives = 154/225 (68.44%), Query Frame = 1
Query:   37 SIGDHNFHALVKEAYFAFEALSQHPYGFTSYFHGHHPELLCIDGCAKIATDNVSTAQFEVARMDRHVDTDLQHVLLKMSMMSKMVFRSRLRWVVKAAPICGPHNRISNSMRRTEREKMAAERSPDSGDVGELMLALGDGAISDISNKTLGDLKNIYRLCFSGGKSISRCSNKAAFVEGLEDLWKSAGVGNGGDR*SKLFICRPSGTTAGVGGLFAPD----WVMC 699
            SI DHNF A +++AYFAFE L+QHP+ F SY +GH PEL+ IDGCAK+ +D+ + A F+ AR +R VD DL H LLKMSM+SKMVFR+RLRWV +A P  G  NRISN M RT R K     S ++GD GEL+ AL  G + D++ KTL DLKNIYRLCF GG+ IS  + K  F+   + LW+ A   +  DR SK+FI RPSG TAGV GLF PD    W  C
Sbjct:   16 SIRDHNFIAAIRDAYFAFEGLTQHPFDFVSYLYGHCPELMSIDGCAKVISDDATLAHFDQARQERLVDIDLGHQLLKMSMISKMVFRTRLRWVTEAPPTFGRRNRISNVMLRTARGKPPPVGSAETGDAGELLRALNGGGMDDLNEKTLDDLKNIYRLCFPGGRGISAYTKKEDFIGCFQQLWRFALGPDEADRCSKVFIVRPSGKTAGVEGLFTPDGVTLWTPC 240          
BLAST of mRNA_H-canaliculatus_F_contig101.126.1 vs. uniprot
Match: A0A6H5KTI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTI3_9PHAE)

HSP 1 Score: 214 bits (546), Expect = 5.320e-65
Identity = 103/156 (66.03%), Postives = 126/156 (80.77%), Query Frame = 1
Query:   34 RSIGDHNFHALVKEAYFAFEALSQHPYGFTSYFHGHHPELLCIDGCAKIATDNVSTAQFEVARMDRHVDTDLQHVLLKMSMMSKMVFRSRLRWVVKAAPICGPHNRISNSMRRTEREKMAAERSPDSGDVGELMLALGDGAISDISNKTLGDLKNI 501
             SI DHNF AL+K+AYFAFEAL QHP+GF S+ HG  PE+ CIDGCAKI TD+VS  QF+ AR +R VD DL + +LKMSM+SKMVF +RLRWV++AAPI GPHNR+SN M RT R +MA   SP++GD GELM ALGDGAI+D+S+K++ DLKNI
Sbjct:   13 NSIEDHNFRALIKQAYFAFEALVQHPFGFVSFMHGRWPEIFCIDGCAKICTDDVSREQFDFARAERDVDADLHNEMLKMSMISKMVFNARLRWVLEAAPILGPHNRVSNVMHRTARGRMAPVGSPENGDAGELMRALGDGAITDLSDKSVSDLKNI 168          
BLAST of mRNA_H-canaliculatus_F_contig101.126.1 vs. uniprot
Match: A0A6H5L3W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3W5_9PHAE)

HSP 1 Score: 201 bits (512), Expect = 2.320e-55
Identity = 115/227 (50.66%), Postives = 145/227 (63.88%), Query Frame = 1
Query:  610 GDR*SKLFICRPSGTTAGVGGLFAPDWVMCAHVFQLTVESPADAVDIMAHLLAQPCLLITDVPCMMAPIAEKRQPGLLENGGALPRNAEGEVSLAGMQPSGAHAHEFPDKHHLKLPPRGFPFALASTTSGADSIDKVYAVFAS--------TETSLPLQAHVDFHALLRRAAEAAEENRQLKAVASAGGVFDASSSSQRMCELAERTLKSLHADGIYAMTLFELVFL 1266
            G+R SKLF+ +PSGTTAGV G F  D V     FQ+T ES AD VDI+AH+L QPCL+ITD+PC + PIAE+  PGLL++GG LPR+AEG+V L  +Q  GAHA+EFPD+H +K+PP GFP   A+ T GA  +                  ET+  +Q HVDF +LLRRAA+A +  R          V D SSS  R+ +LAE TL  LH  G YAMTL+E+V L
Sbjct:    7 GERCSKLFVGKPSGTTAGVEGFFTTDGVFVYGTFQVTPESAADVVDILAHILVQPCLVITDIPCKIVPIAERLFPGLLQDGGVLPRDAEGQVCLKELQHIGAHAYEFPDEHEVKVPPMGFP--TAAFTLGASPVQXXXXXXXXXXXXXXXXAETAPGVQPHVDFRSLLRRAADAQDRART---------VADPSSSLMRISDLAESTLNGLHKRGWYAMTLYEVVLL 222          
BLAST of mRNA_H-canaliculatus_F_contig101.126.1 vs. uniprot
Match: A0A6H5JY55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY55_9PHAE)

HSP 1 Score: 177 bits (450), Expect = 2.560e-50
Identity = 93/165 (56.36%), Postives = 113/165 (68.48%), Query Frame = 1
Query:  268 MSMMSKMVFRSRLRWVVKAAPICGPHNRISNSMRRTEREKMAAERSPDSGDVGELMLALGDGAISDISNKTLGDLKNIYRLCFSGGKSISRCSNKAAFVEGLEDLWKSAGVGNGGDR*SKLFICRPSGTTAGVGGLFAPDWVMCAHVFQLTVESPADAVDIMAHL 762
            MSM+SKMVFR+RLRWV +A P  G  NRISN M RT R K     SP++GD GEL+ AL  G + D++ KTL DLKNIYRLCF GG+ IS  + K  F+   + LW+ A   +  DR SK+FI RPSG TAGV GLF PD V+ +H+ Q+T ESPAD VD M HL
Sbjct:    1 MSMISKMVFRTRLRWVTEAPPTFGRRNRISNVMLRTARGKPPPVGSPETGDAGELLRALNGGGMDDLNEKTLDDLKNIYRLCFPGGRGISAYTKKEDFIGCFQQLWRFALGPDEADRCSKVFIVRPSGKTAGVEGLFTPDGVVNSHLLQVTSESPADVVDTMRHL 165          
BLAST of mRNA_H-canaliculatus_F_contig101.126.1 vs. uniprot
Match: A0A6H5JL59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL59_9PHAE)

HSP 1 Score: 165 bits (417), Expect = 3.270e-45
Identity = 89/172 (51.74%), Postives = 112/172 (65.12%), Query Frame = 1
Query:  268 MSMMSKMVFRSRLRWVVKAAPICGPHNRISNSMRRTEREKMAAERSPDSGDVGELMLALGDGAISDISNKTLGDLKNIYRLCFSGGKSISRCSNKAAFVEGLEDLWKSAGVGNGGDR*SKLFICRPSGTTAGVGGLFAPDWVMCAHVFQLTVESPADAVDIMAHLLAQPCLL 783
            MSM+ KM+F +RLRWV++AAP  GPHNR+SN M RT R +MA   SP++GD GELM ALGDGA++D+S+K+                           V+ L+ LW+SAG     +R SKLFI +PSG+TAGV GLF  D VM AHVFQ+T ESPADAVD++ HLL   C L
Sbjct:    1 MSMIYKMIFNARLRWVLEAAPTFGPHNRVSNVMHRTARGRMAPVGSPENGDAGELMRALGDGAVTDLSDKS------------------------ELLVQCLQKLWESAGADGERERCSKLFIGKPSGSTAGVEGLFTGDGVMVAHVFQITAESPADAVDMLVHLLVSYCAL 148          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig101.126.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D8LKH0_ECTSI2.620e-14556.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KB28_9PHAE2.130e-9661.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JEL5_9PHAE2.150e-8757.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUN3_9PHAE1.730e-7845.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5W4_9PHAE1.300e-7739.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KB33_9PHAE1.010e-7455.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KTI3_9PHAE5.320e-6566.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L3W5_9PHAE2.320e-5550.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JY55_9PHAE2.560e-5056.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JL59_9PHAE3.270e-4551.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig101contigH-canaliculatus_F_contig101:17024..19821 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons3
Model size1269
Cds size576
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig101.126.1prot_H-canaliculatus_F_contig101.126.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig101 17856..19821 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928637.7577987-UTR-H-canaliculatus_F_contig101:17023..175621622928637.7577987-UTR-H-canaliculatus_F_contig101:17023..17562Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig101 17024..17562 +
1696845507.0395262-UTR-H-canaliculatus_F_contig101:17023..175621696845507.0395262-UTR-H-canaliculatus_F_contig101:17023..17562Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig101 17024..17562 +
1622928637.7721722-UTR-H-canaliculatus_F_contig101:17701..178551622928637.7721722-UTR-H-canaliculatus_F_contig101:17701..17855Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig101 17702..17855 +
1696845507.0505345-UTR-H-canaliculatus_F_contig101:17701..178551696845507.0505345-UTR-H-canaliculatus_F_contig101:17701..17855Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig101 17702..17855 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928637.7861855-CDS-H-canaliculatus_F_contig101:17855..179271622928637.7861855-CDS-H-canaliculatus_F_contig101:17855..17927Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig101 17856..17927 +
1696845507.0594258-CDS-H-canaliculatus_F_contig101:17855..179271696845507.0594258-CDS-H-canaliculatus_F_contig101:17855..17927Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig101 17856..17927 +
1622928637.802428-CDS-H-canaliculatus_F_contig101:19317..198211622928637.802428-CDS-H-canaliculatus_F_contig101:19317..19821Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig101 19318..19821 +
1696845507.0681682-CDS-H-canaliculatus_F_contig101:19317..198211696845507.0681682-CDS-H-canaliculatus_F_contig101:19317..19821Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig101 19318..19821 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig101.126.1

>prot_H-canaliculatus_F_contig101.126.1 ID=prot_H-canaliculatus_F_contig101.126.1|Name=mRNA_H-canaliculatus_F_contig101.126.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=192bp
MCAHVFQLTVESPADAVDIMAHLLAQPCLLITDVPCMMAPIAEKRQPGLL
ENGGALPRNAEGEVSLAGMQPSGAHAHEFPDKHHLKLPPRGFPFALASTT
SGADSIDKVYAVFASTETSLPLQAHVDFHALLRRAAEAAEENRQLKAVAS
AGGVFDASSSSQRMCELAERTLKSLHADGIYAMTLFELVFL*
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mRNA from alignment at H-canaliculatus_F_contig101:17024..19821+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig101.126.1 ID=mRNA_H-canaliculatus_F_contig101.126.1|Name=mRNA_H-canaliculatus_F_contig101.126.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2798bp|location=Sequence derived from alignment at H-canaliculatus_F_contig101:17024..19821+ (Hapterophycus canaliculatus Oshoro5f female)
CTTGTCCCGCCTCCGGTGTTTTCCCTTGTTTTTCGTAGTATCGGGGACCA CAACTTTCACGCACTCGTGAAGGAAGCATATTTTGCCTTCGAAGCCTTGA GTCAGCACCCGTACGGTTTTACGAGCTACTTCCACGGACACCACCCAGAG CTCCTCTGCATAGATGGTTGCGCGAAAATAGCGACGGACAACGTTTCCAC AGCCCAGTTCGAGGTTGCTCGGATGGATAGACACGTGGACACGGATCTCC AGCACGTCCTGCTAAAGATGTCCATGATGTCCAAGATGGTGTTCAGGTCT CGTCTCCGCTGGGTGGTGAAGGCAGCGCCGATCTGCGGACCGCACAATCG CATATCCAACTCCATGCGTCGGACGGAACGAGAAAAAATGGCGGCGGAGA GATCTCCCGATAGTGGGGACGTTGGAGAGCTTATGCTTGCGCTCGGCGAC GGCGCAATTAGCGATATCTCGAACAAGACACTGGGCGATCTCAAAAACAT CTACAGGCTCTGCTTCTCCGGTGGAAAGAGTATCAGCAGGTCCGTTTTCC CGTGACCAACGTAAACGTTGCCGTTGGAAGTTTCGAATAATGTTGGCAGT GTTTCAGTCGTCGCACTTGCTTGTGGCAATTGCCCGTCGACACGACCCCC CCATGCGTGTGTTGTCGCGCCGAGTTAGGTGTTCGAACAAGGCCGCTTTC GTCGAAGGCCTCGAAGACCTCTGGAAGTCTGCCGGCGTGGGAAATGGCGG GGATCGATGATCAAAGTTGTTCATCTGTAGACCGTCGGGGACGACGGCAG GAGTGGGAGGGCTCTTCGCTCCGGACTGGGTGATGTGCGCACACGTCTTC CAGCTCACGGTAGAGAGCCCGGCGGATGCCGTGGATATTATGGCGCATCT CCTGGTGAGATGTTGTGGAGTTAGAAGTTCGGCATACACCGGTATTTAGC ACACCAAGAATGCAGGCTCTTATATTTCCAAGGTTTGGCATCTAAAGTGT AGCACTGTCGAAAGTACAGCCCTACCTCCCCGTGCTCCCCACCCTCGAGT CCCTCGCGAAGAGTGCGTCGTGCTGTCAAGCTTCAATTTTACGTGTTTCT TTCGAGGTTGCAATCTGTTTTGCAACCTTCGAAACTTGAACTTCCTATTT CTAAAGTTATAGTCGGCCGAGGATCCCCATACACATTTATTATACTTTAA ACTAACGTTCCGGACAATACTTGTACCAGTGCCTGGCGCGCCGATTTTTT TCTTGCACGAGATAATTCGTTCACGAATTCCCGTCGTCTGACAAGAGTGT GGGAAAACGATGCCCACCATAGATATTCGATTTGTGGGTTCCCCATTGAG GCTGTGAAAAACAGGAATAGCTTGTTCACAGTTTGGAGCTAGAACGGTGA CGTCTTGTCTACCAACAGTAATTACCGACGTAAAGCATAAAATATCTCGT CTGACAACAACACAGAATGTTTTCCCACCATACGGAACCCTCACTGTAAG GCATTCAACAAAAATCCTATTGAGTCGCTGTTCTTTTGTCTCCGCGGAGA GTATTCCTTTGGTGTTGTTGACTTGTATACAAGAAAATACATTGCACAAG TATCGCATTCTATGCCCTGTCATTATTTCGTATTTATTTTTGAGGGAAAA AGTGTGCACACCAGCTCGGTGGGAATGTTCATGCATACGAGGCGTCTTGC GATGGGGTTGAATGCCACGCACGTCATTCCTTTCTTTTACAAGTATCTTT TTGTTTCTTTCATGACCCCGTCCCTCTGCTGCGTCTGTCCGTGGACGTTT ACCGGTTGCGTTGGGACACCTAACAATCGTGGCGGGATCCTCTTTAACGA ATACCGCTTCACGACAGGCAAGCTATTCGTTGTGTAAAGAGGTTGGACTG TTTTGTGTATGTGGTTCCTTACAAGCGGAAATGGACTTGCCTGCTCTGTG GTCGATGCTCATTTACACATAGAGTATCCAACGCTCGTTGGAGGCCAAAC GAATTTTGTGCCTAGCAGCCTCACAAGATTAAACCACAGAAATGCCGGAG TTCTAATCGTATAAATTAGAACATCTCGAGCTTCACGTCAGATTTCTTCC TTTCCCAGGGATCAGTATGTCATTGGACAAACCAAAGTACCATTGAGTAC AGTGCGTGATGCTGTTTCGACTGGATTCGAGCGCAAAGAATTGTGTGGGG TATCATTTTGCGCACTTCAAACCTTGTTTGTAATCACGCTGTACTCTTCT TTCTGCGTTCGTCACCCCTCCCTGTATTTGTCGCCGCTCCCAAGGCACAA CCATGCTTGCTCATCACAGATGTACCATGCATGATGGCGCCGATCGCGGA AAAGCGTCAACCCGGCCTACTGGAAAATGGAGGCGCCCTGCCCCGCAATG CCGAAGGTGAAGTATCCTTGGCGGGAATGCAGCCCAGTGGTGCCCATGCG CACGAGTTTCCGGACAAGCACCACCTGAAGCTGCCACCGAGAGGGTTCCC ATTTGCACTCGCATCCACGACGTCAGGCGCTGACTCAATTGACAAAGTGT ACGCCGTGTTTGCCAGCACCGAGACTTCTCTTCCCCTTCAAGCGCACGTC GACTTTCACGCCTTGCTTCGACGTGCAGCCGAGGCAGCAGAGGAGAATCG TCAACTTAAAGCTGTTGCTAGTGCTGGCGGGGTATTCGATGCGTCCTCGT CGTCCCAGCGCATGTGCGAGCTTGCAGAGAGGACTCTCAAGTCTCTCCAC GCGGACGGAATCTACGCCATGACCCTCTTCGAGCTTGTGTTTTTATAA
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig101:17024..19821+

>mRNA_H-canaliculatus_F_contig101.126.1 ID=mRNA_H-canaliculatus_F_contig101.126.1|Name=mRNA_H-canaliculatus_F_contig101.126.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1152bp|location=Sequence derived from alignment at H-canaliculatus_F_contig101:17024..19821+ (Hapterophycus canaliculatus Oshoro5f female)
ATGTGCGCACACGTCTTCCAGCTCACGGTAGAGAGCCCGGCGGATGCCGT
GGATATTATGGCGCATCTCCTGATGTGCGCACACGTCTTCCAGCTCACGG
TAGAGAGCCCGGCGGATGCCGTGGATATTATGGCGCATCTCCTGGCACAA
CCATGCTTGCTCATCACAGATGTACCATGCATGATGGCGCCGATCGCGGA
AAAGCGTCAACCCGGCCTACTGGAAAATGGAGGCGCCCTGCCCCGCAATG
CCGAAGGTGAAGTATCCTTGGCGGGAATGCAGCCCAGTGGTGCCCATGCG
CACGAGTTTCCGGACAAGCACCACCTGAAGCTGCCACCGAGAGGGTTCCC
ATTTGCACTCGCATCCACGACGTCAGGCGCTGACTCAATTGACAAAGTGT
ACGCCGTGTTTGCCAGCACCGAGACTTCTCTTCCCCTTCAAGCGCACGTC
GACTTTCACGCCTTGCTTCGACGTGCAGCCGAGGCAGCAGAGGAGAATCG
TCAACTTAAAGCTGTTGCTAGTGCTGGCGGGGTATTCGATGCGTCCTCGT
CGTCCCAGCGCATGTGCGAGCTTGCAGAGAGGACTCTCAAGTCTCTCCAC
GCGGACGGAATCTACGCCATGACCCTCTTCGAGCTTGTGTTTTTATAAGC
ACAACCATGCTTGCTCATCACAGATGTACCATGCATGATGGCGCCGATCG
CGGAAAAGCGTCAACCCGGCCTACTGGAAAATGGAGGCGCCCTGCCCCGC
AATGCCGAAGGTGAAGTATCCTTGGCGGGAATGCAGCCCAGTGGTGCCCA
TGCGCACGAGTTTCCGGACAAGCACCACCTGAAGCTGCCACCGAGAGGGT
TCCCATTTGCACTCGCATCCACGACGTCAGGCGCTGACTCAATTGACAAA
GTGTACGCCGTGTTTGCCAGCACCGAGACTTCTCTTCCCCTTCAAGCGCA
CGTCGACTTTCACGCCTTGCTTCGACGTGCAGCCGAGGCAGCAGAGGAGA
ATCGTCAACTTAAAGCTGTTGCTAGTGCTGGCGGGGTATTCGATGCGTCC
TCGTCGTCCCAGCGCATGTGCGAGCTTGCAGAGAGGACTCTCAAGTCTCT
CCACGCGGACGGAATCTACGCCATGACCCTCTTCGAGCTTGTGTTTTTAT
AA
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