prot_H-canaliculatus_F_contig1142.1255.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-canaliculatus_F_contig1142.1255.1
Unique Name	prot_H-canaliculatus_F_contig1142.1255.1
Type	polypeptide
Organism	Hapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length	179

Homology

[Close]

BLAST of mRNA_H-canaliculatus_F_contig1142.1255.1 vs. uniprot
Match: D7FMB2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMB2_ECTSI)

HSP 1 Score: 176 bits (445), Expect = 2.760e-53
Identity = 111/163 (68.10%), Postives = 119/163 (73.01%), Query Frame = 0

Query:   23 MALLRFSVLPAALKNYGCGSLAVSLRMFAGVTALALSLESFLLVPIGAQIDSLEKMMSRGHTPQEKAAVVLGVVLLLALVLIIRRTVRLQIEQIQRETSAGSDGSSLSDGGGETQVRARAVILPKRRSGAGVSQGAGGEWA-------GTCRDEALMIEHAVL 178
            MALLRFSVLPAALKNYGCGSLAVS+RM+AGVTALALSLESF+LVPIGA+IDSLE MMSR HT QEKAA+VLGVVLLL LV  IRRTVRLQIEQIQR+T+A   G    DGGG  Q   R V    RR G G   G GG             RD +LM EHAVL
Sbjct:    1 MALLRFSVLPAALKNYGCGSLAVSVRMYAGVTALALSLESFVLVPIGARIDSLENMMSRKHTLQEKAALVLGVVLLLTLVFGIRRTVRLQIEQIQRDTAARGSGG---DGGGSLQDTGRGVPPRGRREG-GAGHGFGGSRLPPGEGRFAVARDTSLMDEHAVL 159

[Close]

BLAST of mRNA_H-canaliculatus_F_contig1142.1255.1 vs. uniprot
Match: A0A6H5JLS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLS6_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 8.490e-41
Identity = 103/189 (54.50%), Postives = 116/189 (61.38%), Query Frame = 0

Query:    1 MVEHYDWLAALGLMMRERQFRTMALLRFSVLPAALKNYGCGSLAVSLRMFAGVTALALSLESFLLVPIGAQIDSLEKMMSRGHTPQEKAAVVLGVVLLLALVLIIRRTVRLQIEQIQRETSAGSDGSSLSDGGGETQVRARAVILPKRRSGAGVSQGAGGEWAGT-----------CRDEALMIEHAVL 178
            MVEHYDWLAAL LMM+E+QFR                          RM+AGVTALALSLESF+LVPIGA+IDSLE MMSR HT QEKAA+VLGVVLLL LV  IRRTVRLQIEQIQR+T+A S G    DG G  Q   R V    RR G     GAG  ++G+            RD +L+ EHA L
Sbjct:  147 MVEHYDWLAALSLMMKEQQFRA-------------------------RMYAGVTALALSLESFVLVPIGARIDSLENMMSRKHTLQEKAALVLGVVLLLTLVFGIRRTVRLQIEQIQRDTAARSSGG---DGCGSLQDTGRGVPPRGRREG-----GAGHSFSGSRLPPGEGRFAVARDTSLIDEHASL 302

The following BLAST results are available for this feature:

BLAST of mRNA_H-canaliculatus_F_contig1142.1255.1 vs. uniprot

BLAST of mRNA_H-canaliculatus_F_contig1142.1255.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FMB2_ECTSI	2.760e-53	68.10	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JLS6_9PHAE	8.490e-41	54.50	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015414	Transmembrane protein TMEM64	PANTHER	PTHR12677	UNCHARACTERIZED	coord: 2..124
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 71..89
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 20..38
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 39..49
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 110..178
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..19
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 50..70
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 90..109
None	No IPR available	TMHMM	TMhelix		coord: 47..69
None	No IPR available	TMHMM	TMhelix		coord: 89..106

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-canaliculatus_F_contig1142	contig	H-canaliculatus_F_contig1142:24818..27753 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90	2022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-canaliculatus_F_contig1142.1255.1	mRNA_H-canaliculatus_F_contig1142.1255.1	Hapterophycus canaliculatus Oshoro5f female	mRNA	H-canaliculatus_F_contig1142 21286..28994 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-canaliculatus_F_contig1142.1255.1 ID=prot_H-canaliculatus_F_contig1142.1255.1|Name=mRNA_H-canaliculatus_F_contig1142.1255.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=179bp
MVEHYDWLAALGLMMRERQFRTMALLRFSVLPAALKNYGCGSLAVSLRMF
AGVTALALSLESFLLVPIGAQIDSLEKMMSRGHTPQEKAAVVLGVVLLLA
LVLIIRRTVRLQIEQIQRETSAGSDGSSLSDGGGETQVRARAVILPKRRS
GAGVSQGAGGEWAGTCRDEALMIEHAVL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR015414	TMEM64