prot_H-canaliculatus_F_contig1141.1247.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1141.1247.1
Unique Nameprot_H-canaliculatus_F_contig1141.1247.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length778
Homology
BLAST of mRNA_H-canaliculatus_F_contig1141.1247.1 vs. uniprot
Match: A0A6H5KSG1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG1_9PHAE)

HSP 1 Score: 118 bits (295), Expect = 8.400e-24
Identity = 97/202 (48.02%), Postives = 115/202 (56.93%), Query Frame = 0
Query:  602 RERDAYRM--GRENN-----DASMVPAALPAAPAIRTSTADWLAAVSEEKDKELDYR--SAGWRDWGAAGSTGAAAAAERSTFREAPTFRAAAAATATAGARGVMLEDS---GGGRGYR-PTGVPAGDGPG-ALPVGWGLSGSGG-----------VDRGVLPEALAGTLDHIVGQLDMLTRTVGVLEQRLTLTEDRLQRRE 778
            +ERD+Y +  GR++       A+   AAL AAPAIRT  ADWL+A  +      DYR  +A WRDW A      AA      F    +FR+ AAAT  +G     L ++   G   G R   G  A   PG  L  G G+ G+GG           VDRG LPEALAGTLDHIVGQLDMLTRTVG+LEQRLTLTEDRLQ+ E
Sbjct:  456 KERDSYALLGGRQSERPLSATAAAATAALAAAPAIRTGAADWLSAGED------DYRGGAAVWRDWTAPAPAVGAAPEAAGAFSAPGSFRSGAAATKFSGGDMFGLGEAALGGPAHGRRGEAGAAARGAPGRGLLEGGGVYGTGGXXXGAPRRSLEVDRGALPEALAGTLDHIVGQLDMLTRTVGLLEQRLTLTEDRLQQGE 651          
BLAST of mRNA_H-canaliculatus_F_contig1141.1247.1 vs. uniprot
Match: D8LSH2_ECTSI (Lissencephaly protein 1-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSH2_ECTSI)

HSP 1 Score: 116 bits (291), Expect = 2.780e-23
Identity = 95/203 (46.80%), Postives = 112/203 (55.17%), Query Frame = 0
Query:  602 RERDAYRM--GRENN-----DASMVPAALPAAPAIRTSTADWLAAVSEEKDKELDYRSAG--WRDWGAAGSTGAAAAAERSTFREAPTFRAAAAATATAGARGVMLEDSG------GGRGYRPTGVPAGDGPGALPVGWGLSGSGG-----------VDRGVLPEALAGTLDHIVGQLDMLTRTVGVLEQRLTLTEDRLQRRE 778
            +ERD+Y +  GR++       A+   AAL AAPAIRT+ ADWL+A  +      DYR  G  WRDW A      AA           +FR+ AAAT  +G     L ++       G RG     V    G G L  G G+ G+G            VDRG LPEALAGTLDHIVGQLDMLTRTVGVLEQRLTLTEDRLQ+ E
Sbjct:  474 KERDSYELLGGRQSERPLSATAAAGAAALAAAPAIRTAAADWLSAGED------DYRGGGAVWRDWTAPAPAVGAAPEAAGAISAPGSFRSGAAATKFSGGDMFGLGEAALGGPAHGRRGGAAAAVRGAPGRGLL-EGGGVCGTGXXXXXAPRRSLEVDRGALPEALAGTLDHIVGQLDMLTRTVGVLEQRLTLTEDRLQQGE 669          
BLAST of mRNA_H-canaliculatus_F_contig1141.1247.1 vs. uniprot
Match: A0A3L6VRZ9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VRZ9_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 3.650e-9
Identity = 26/53 (49.06%), Postives = 39/53 (73.58%), Query Frame = 0
Query:   93 FPLDPELERTFRGRGAAVTGVSYSPDMKQLVSSASDNNLMVWTFRAQLRALKF 145
            FP+DP L+RTFRG  + V  +SY+P+M+QL S + D  +M+W F+ Q+RA +F
Sbjct:   32 FPMDPSLQRTFRGHKSGVECLSYNPNMRQLASGSLDCTVMIWNFKPQMRAFRF 84          
BLAST of mRNA_H-canaliculatus_F_contig1141.1247.1 vs. uniprot
Match: R1F002_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1F002_EMIHU)

HSP 1 Score: 69.3 bits (168), Expect = 6.130e-9
Identity = 31/55 (56.36%), Postives = 39/55 (70.91%), Query Frame = 0
Query:   91 SPFPLDPELERTFRGRGAAVTGVSYSPDMKQLVSSASDNNLMVWTFRAQLRALKF 145
            SP P+DP LER+FRG    V+ VS+SP MKQLVS   D  +MVW F+ Q+RA +F
Sbjct:    3 SPEPMDPALERSFRGHKDGVSSVSFSPTMKQLVSGGLDGTVMVWNFKMQMRAFRF 57          
BLAST of mRNA_H-canaliculatus_F_contig1141.1247.1 vs. uniprot
Match: A0A835Z3N7_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3N7_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 1.490e-8
Identity = 35/59 (59.32%), Postives = 42/59 (71.19%), Query Frame = 0
Query:  718 PGALPVGWGLSGSGGVDRGVLPEALAGTLDHIVGQLDMLTRTVGVLEQRLTLTEDRLQR 776
            PG         G GGV R  LP  LAGTLDHIVGQLD++TRT+ +LEQRLTL ED+++R
Sbjct:  431 PGGXXXXXXXXGEGGVSRDELPAVLAGTLDHIVGQLDIVTRTLAILEQRLTLAEDKIER 489          
BLAST of mRNA_H-canaliculatus_F_contig1141.1247.1 vs. uniprot
Match: A0A7S2CER6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CER6_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 3.480e-8
Identity = 28/42 (66.67%), Postives = 36/42 (85.71%), Query Frame = 0
Query:  733 VDRGVLPEALAGTLDHIVGQLDMLTRTVGVLEQRLTLTEDRL 774
            + R +LPE L  TLDHIVGQLD++TRT+ +LEQR++LTEDRL
Sbjct:   64 ISRDMLPEVLTATLDHIVGQLDVVTRTMSILEQRVSLTEDRL 105          
BLAST of mRNA_H-canaliculatus_F_contig1141.1247.1 vs. uniprot
Match: A0A3S0ZAS1_ELYCH (Uncharacterized protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A3S0ZAS1_ELYCH)

HSP 1 Score: 66.6 bits (161), Expect = 9.240e-8
Identity = 30/50 (60.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:   96 DPELERTFRGRGAAVTGVSYSPDMKQLVSSASDNNLMVWTFRAQLRALKF 145
            DP LER FRG    VT V +SP+M QL SS+ DNNLMVW F+A++RA +F
Sbjct:    6 DPSLERHFRGHRDVVTAVDFSPNMTQLASSSLDNNLMVWNFKAKMRAYRF 55          
BLAST of mRNA_H-canaliculatus_F_contig1141.1247.1 vs. uniprot
Match: A0A3R6XQU3_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6XQU3_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 1.130e-7
Identity = 27/53 (50.94%), Postives = 39/53 (73.58%), Query Frame = 0
Query:   93 FPLDPELERTFRGRGAAVTGVSYSPDMKQLVSSASDNNLMVWTFRAQLRALKF 145
            FP+DP L+RTFRG  + V  +SYSP+M+QL S + D  +M+W F+ Q+RA +F
Sbjct:   32 FPMDPSLQRTFRGHKSGVECLSYSPNMRQLASGSLDCTVMIWNFKPQMRAFRF 84          
BLAST of mRNA_H-canaliculatus_F_contig1141.1247.1 vs. uniprot
Match: A0A2C9JD71_BIOGL (Uncharacterized protein n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9JD71_BIOGL)

HSP 1 Score: 65.5 bits (158), Expect = 2.050e-7
Identity = 29/50 (58.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:   96 DPELERTFRGRGAAVTGVSYSPDMKQLVSSASDNNLMVWTFRAQLRALKF 145
            DP LER FRG    VT V ++P+M QL SS+ DNNLMVW F+A++RA +F
Sbjct:    6 DPSLERHFRGHRDVVTSVDFNPNMTQLASSSLDNNLMVWNFKAKMRAYRF 55          
BLAST of mRNA_H-canaliculatus_F_contig1141.1247.1 vs. uniprot
Match: UPI000359547A (POC1 centriolar protein homolog A isoform X1 n=2 Tax=Aplysia californica TaxID=6500 RepID=UPI000359547A)

HSP 1 Score: 65.5 bits (158), Expect = 2.080e-7
Identity = 29/50 (58.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:   96 DPELERTFRGRGAAVTGVSYSPDMKQLVSSASDNNLMVWTFRAQLRALKF 145
            DP LER FRG    VT V ++P+M QL SS+ DNNLMVW F+A++RA +F
Sbjct:    6 DPSLERHFRGHRDVVTAVDFNPNMTQLASSSLDNNLMVWNFKAKMRAYRF 55          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1141.1247.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KSG1_9PHAE8.400e-2448.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSH2_ECTSI2.780e-2346.80Lissencephaly protein 1-like n=1 Tax=Ectocarpus si... [more]
A0A3L6VRZ9_9STRA3.650e-949.06Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
R1F002_EMIHU6.130e-956.36Uncharacterized protein n=2 Tax=Emiliania huxleyi ... [more]
A0A835Z3N7_9STRA1.490e-859.32WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A7S2CER6_9STRA3.480e-866.67Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A3S0ZAS1_ELYCH9.240e-860.00Uncharacterized protein n=1 Tax=Elysia chlorotica ... [more]
A0A3R6XQU3_9STRA1.130e-750.94Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A2C9JD71_BIOGL2.050e-758.00Uncharacterized protein n=1 Tax=Biomphalaria glabr... [more]
UPI000359547A2.080e-758.00POC1 centriolar protein homolog A isoform X1 n=2 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 290..304
score: 37.93
coord: 332..346
score: 38.35
coord: 206..220
score: 35.58
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 138..177
e-value: 1.1E-7
score: 41.5
coord: 180..219
e-value: 2.4E-7
score: 40.4
coord: 222..261
e-value: 2.3E-10
score: 50.4
coord: 348..387
e-value: 8.9E-10
score: 48.5
coord: 264..303
e-value: 3.6E-10
score: 49.8
coord: 96..135
e-value: 3.1E-5
score: 33.4
coord: 306..345
e-value: 7.7E-10
score: 48.7
IPR001680WD40 repeatPFAMPF00400WD40coord: 100..134
e-value: 0.011
score: 16.6
coord: 226..261
e-value: 1.1E-8
score: 35.6
coord: 308..345
e-value: 1.0E-7
score: 32.5
coord: 349..386
e-value: 5.0E-7
score: 30.3
coord: 186..219
e-value: 6.9E-7
score: 29.9
coord: 266..303
e-value: 6.9E-7
score: 29.9
coord: 144..176
e-value: 3.3E-7
score: 30.9
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 145..176
score: 15.154
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 187..228
score: 15.154
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 313..354
score: 17.827
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 229..270
score: 16.056
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 271..312
score: 13.683
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 103..137
score: 11.745
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 355..386
score: 12.848
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 183..259
e-value: 1.4E-26
score: 95.3
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 94..182
e-value: 3.4E-21
score: 77.5
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 260..407
e-value: 1.5E-44
score: 154.0
NoneNo IPR availablePANTHERPTHR44019FAMILY NOT NAMEDcoord: 738..776
NoneNo IPR availablePANTHERPTHR44019FAMILY NOT NAMEDcoord: 96..392
NoneNo IPR availablePANTHERPTHR44019:SF1POC1 CENTRIOLAR PROTEIN HOMOLOG Bcoord: 738..776
NoneNo IPR availablePANTHERPTHR44019:SF1POC1 CENTRIOLAR PROTEIN HOMOLOG Bcoord: 96..392
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 24..41
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 42..778
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 15..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..41
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..28
score: 0.612
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 248..262
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 332..346
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 290..304
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 103..396
score: 76.378
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 94..386

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1141contigH-canaliculatus_F_contig1141:15359..23125 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1141.1247.1mRNA_H-canaliculatus_F_contig1141.1247.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1141 15359..23125 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1141.1247.1 ID=prot_H-canaliculatus_F_contig1141.1247.1|Name=mRNA_H-canaliculatus_F_contig1141.1247.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=778bp
WGVSVPPSFVSSFRLLALCSCLCSGKMAFRPSTFGAGSSSSSRLARSGRR
QFAGMDRTTLTDRESLLQSTGSTSRTEAAKRGALGSLPHSSPFPLDPELE
RTFRGRGAAVTGVSYSPDMKQLVSSASDNNLMVWTFRAQLRALKFKGHTA
KVHHAEFSPDGSLVASASKDRTVRLWTPSARGGSSVLKGHMGGVRHASFS
RNGRLLITASEDKTVKIWSMPSQRFVCTLNGHNNWVRCATFSPDSRLATS
CGDDKTVKLWDVQTQDCLHSFFDHDGSVGQARFHPDGTCVAACSADRTIK
VWDARSHQLLQHYPAHDGEVTSISFHESGNFLLSSSTDASVKIWDLREGR
LVYTLKGHSGSVTACAFSADGTRFASGGEDGLVMSWRSHLDNRLAGGNGA
STTLGEAPFGGRAMTAAGGRGDGVDAAAAAAAAQGGVRKGSLGNGAAPGR
QQRTALGVRTTNARTSAPGGGGGGAHRSGTSMSSVGRERGVGGVRGGASC
YGASDESVRPSSGSPPNVDHDHDHHRRRRRATATARRGADLRLGEGTQQF
SQQQYPHFAMEDLEYAHGDGGGAGSAQMFTSGITPAADSAAAAAATETVV
SRERDAYRMGRENNDASMVPAALPAAPAIRTSTADWLAAVSEEKDKELDY
RSAGWRDWGAAGSTGAAAAAERSTFREAPTFRAAAAATATAGARGVMLED
SGGGRGYRPTGVPAGDGPGALPVGWGLSGSGGVDRGVLPEALAGTLDHIV
GQLDMLTRTVGVLEQRLTLTEDRLQRRE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR019775WD40_repeat_CS
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR001680WD40_repeat
IPR020472G-protein_beta_WD-40_rep