prot_H-canaliculatus_F_contig10099.124.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig10099.124.1
Unique Nameprot_H-canaliculatus_F_contig10099.124.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length137
Homology
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BLAST of mRNA_H-canaliculatus_F_contig10099.124.1 vs. uniprot
Match: D7FIE4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIE4_ECTSI)

HSP 1 Score: 106 bits (264), Expect = 6.490e-25
Identity = 66/130 (50.77%), Postives = 76/130 (58.46%), Query Frame = 0 
Query:    7 AVLSVLVVECFVDRAWEARAGVVGGGSXXXXXXXXXXAFLSGAEGEGMAAATGAAVRGGGEEWARWLGDGGIAGGVSFRRHDCDTEWCYSRSLLGLWEWLLLFLEAGFCIALRHDLAPATGGIGVESFVL 136
            AVLSVL+VEC     W     + GG            AF+ G         + + V G  +E A           VS  R DCDTEWCYSRSLLGLWE+LLL +EAGFC+ALRHDLAPATGG+GVESFVL
Sbjct:  221 AVLSVLIVECVEGGTWNMGWSIRGGAG----------AFVGGG-------GSSSGVGGFDDETAAVGDQDRWEDNVSSSR-DCDTEWCYSRSLLGLWEYLLLAVEAGFCMALRHDLAPATGGVGVESFVL 332
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10099.124.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FIE4_ECTSI6.490e-2550.77Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..136
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.676

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10099contigH-canaliculatus_F_contig10099:257..667 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10099.124.1mRNA_H-canaliculatus_F_contig10099.124.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig10099 182..2234 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig10099.124.1 ID=prot_H-canaliculatus_F_contig10099.124.1|Name=mRNA_H-canaliculatus_F_contig10099.124.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=137bp
MATALAAVLSVLVVECFVDRAWEARAGVVGGGSGSGSGSLSASAFLSGAE
GEGMAAATGAAVRGGGEEWARWLGDGGIAGGVSFRRHDCDTEWCYSRSLL
GLWEWLLLFLEAGFCIALRHDLAPATGGIGVESFVL*
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