|
|
Homology
BLAST of mRNA_H-canaliculatus_F_contig10094.122.1 vs. uniprot
Match: D7FZH6_ECTSI (WD repeat domain-containing protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZH6_ECTSI) HSP 1 Score: 431 bits (1108), Expect = 4.670e-127 Identity = 251/375 (66.93%), Postives = 289/375 (77.07%), Query Frame = 3 Query: 1335 RARSQQDVRRGVRPDASRHGGGPR*RPGXXXXXXXXXXRRIGVGDTVLRGSRYFPTTSRKPPPSRLARAVARRGTHRPIPGFCYVSPAGTSSAAVDGAKVPVSALWHARVARCNSAAELAVHLRNLQAVIDADLVEQATSSG-LGARAARGXXXXXXXXXXXXXXXXXXXXXXDQVNVVDERWSSSAGEVEVLLKIWTAGRRSREREVWVKESDLRPKALLQWVEWRSIAKRDAELTEIQRRRSRRQRLKDKKREEEQRVARLRQIRAERFKSAFYSILKAHESAVTTLLEDAAGAGAEGADPVRLGQARQVAVERLTENYARRQETAGFPNGEMMRWQDMIPQLQHQVMAPLKEVEGNILGKFRRRVEVRSKTR 2456
RA QQDV RGVRPDA RHGGG R G R +GVG+T+LRG R+FP TSRK PP+RLARA+ARRGTHRPIPGFCYVSPAGTSSAAVDGAKVPVSALWHARVARC SAAELAVHLR+LQ VID DLV+QAT+SG LG RAARGXXXXXXX DQ++VVDERW S+ GEVEVLL+IW AGRRSRERE+WV+ S+LRP+ALL WVEWRS+AKR+AEL E++RR+ RRQR + +K E Q+V R RQ RAE FK AFYSILKAHE+AV LLE+A GAE D +RLGQAR+ AVE+LT NY RRQET+G P+ E MRW M+P+L QVMAPL EVE N+ RR+VE ++ R
Sbjct: 2447 RAGPQQDVGRGVRPDARRHGGGQGQREGRREQHA----RELGVGETLLRGRRFFPPTSRKQPPARLARAMARRGTHRPIPGFCYVSPAGTSSAAVDGAKVPVSALWHARVARCRSAAELAVHLRSLQVVIDQDLVDQATASGGLGVRAARGXXXXXXXE--------------DQIHVVDERWGSAVGEVEVLLRIWAAGRRSREREIWVRVSELRPRALLLWVEWRSLAKREAELAEVRRRQGRRQREEKEKHERAQQVVRHRQARAEHFKMAFYSILKAHETAVAGLLEEAMAVGAEAPDALRLGQARKGAVEKLTANYVRRQETSGPPDSEKMRWGAMVPRLHDQVMAPLIEVEQNMHASLRRKVEDAARAR 2803
BLAST of mRNA_H-canaliculatus_F_contig10094.122.1 vs. uniprot
Match: A0A6H5LKE0_9PHAE (PHD-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LKE0_9PHAE) HSP 1 Score: 336 bits (861), Expect = 1.450e-94 Identity = 247/418 (59.09%), Postives = 268/418 (64.11%), Query Frame = 1 Query: 178 SLYIASSNPLEYVNRYAKAIPYPGMPVHKEARPPLEDSSESHLWHAWPLGAVDVPHPLLPGDPAESPAEGEALVVHAHLEPVARLLIQLQKSFGGLLFGTQWSKAWGLGGEWPQEVRAATSVRALGSLARELLEALPARVFRESWQTPYELKLSRAYKTEVEAAKAAVAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAGRADAWVANGVVFDAPSMPATP-NGRLSGGS-MPSQGRGSSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAPLSLSPLRSSRGKRKASLGGGREAFGVGVGGRGXXXXXX---DGAVPGDARMTSGLDHSKMSDAAFDRMLADMEADRDDDR 1416
+L IASSNPLEYVNRYAKA+P P MP HKEA PPLE S ESH WHAWPLGAV VPHPLLPGDP +PAEGE LV AHLEPVARLL+QLQKSFGGLLFGTQW+ AWGLGG+WP EVRAA SV+ALG LA+EL+EALPARVFRESWQTPYELK+SRAYKTEVEA XXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXX +A AW+ANGV FD PS P + +GR GS +P Q G +P S+SPLRSSRGKRKAS+GGGRE+FGV XXXXX D A+PGDA M SGLDHSKMSDA FDRMLADMEADR +R
Sbjct: 2885 ALLIASSNPLEYVNRYAKAVPCPDMPAHKEAAPPLELSQESHFWHAWPLGAVGVPHPLLPGDPVANPAEGEGLVACAHLEPVARLLLQLQKSFGGLLFGTQWTSAWGLGGQWPMEVRAAGSVQALGRLAQELVEALPARVFRESWQTPYELKVSRAYKTEVEAXXXXXXXXXXXXXXXXXXXXXXAARELANRQLAAERXXXXXXXXXXXXXXXXXXXXEGGTADRNQTD---------TTGAQAGAWMANGVTFDDPSPPGSSVHGRRGSGSGLPPQPGGEPSPTAVEAAAGGSSGAPPADADSYRSPKKQRRRSSRPSVPPVELVV--------SPASMSPLRSSRGKRKASMGGGRESFGVXXXXXXXXXXXDGDEDTAMPGDASMKSGLDHSKMSDAEFDRMLADMEADRGSER 3285
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 277.7 |
| Seed ortholog evalue | 1e-71 |
| Seed eggNOG ortholog | 2880.D7FZH6 |
| Preferred name | CTF1 |
| KEGG ko | ko:K11446,ko:K11797,ko:K11798 |
| GOs | GO:0001932,GO:0001934,GO:0003674,GO:0005102,GO:0005125,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005829,GO:0006325,GO:0006355,GO:0006357,GO:0006606,GO:0006810,GO:0006886,GO:0006913,GO:0006996,GO:0007010,GO:0007088,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007346,GO:0008104,GO:0008150,GO:0008284,GO:0008286,GO:0008360,GO:0009719,GO:0009725,GO:0009889,GO:0009891,GO:0009893,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010033,GO:0010243,GO:0010468,GO:0010469,GO:0010556,GO:0010557,GO:0010562,GO:0010564,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010647,GO:0010648,GO:0010799,GO:0010800,GO:0010941,GO:0015031,GO:0015833,GO:0016043,GO:0017038,GO:0019219,GO:0019220,GO:0019221,GO:0019222,GO:0022603,GO:0022604,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030545,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031399,GO:0031401,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032868,GO:0032869,GO:0032870,GO:0033036,GO:0033043,GO:0033135,GO:0033138,GO:0033365,GO:0034097,GO:0034504,GO:0034613,GO:0038111,GO:0040008,GO:0042127,GO:0042221,GO:0042325,GO:0042327,GO:0042393,GO:0042886,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043434,GO:0043567,GO:0043568,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0045787,GO:0045840,GO:0045893,GO:0045931,GO:0045935,GO:0045937,GO:0045944,GO:0046907,GO:0048018,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051169,GO:0051170,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051252,GO:0051254,GO:0051276,GO:0051641,GO:0051649,GO:0051716,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0060255,GO:0060548,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070577,GO:0070727,GO:0070887,GO:0071310,GO:0071345,GO:0071375,GO:0071417,GO:0071495,GO:0071702,GO:0071705,GO:0071840,GO:0072594,GO:0080090,GO:0090068,GO:0098760,GO:0098761,GO:0098772,GO:0140030,GO:0140033,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141,GO:2001233,GO:2001234,GO:2001236,GO:2001237 |
| EggNOG free text desc. | regulation of cell shape |
| EggNOG OGs | COG0553@1,COG2319@1,KOG0383@2759,KOG0644@2759,KOG1633@1,KOG1633@2759 |
| COG Functional cat. | L |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko01000,ko01009,ko03036,ko04121 |
| Hectar predicted targeting category | other localisation |
| Exons | 6 |
| Model size | 2456 |
| Cds size | 1473 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622928637.2170043-UTR-H-canaliculatus_F_contig10094:129..378 | 1622928637.2170043-UTR-H-canaliculatus_F_contig10094:129..378 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig10094 130..378 + |
| 1696845506.7173107-UTR-H-canaliculatus_F_contig10094:129..378 | 1696845506.7173107-UTR-H-canaliculatus_F_contig10094:129..378 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig10094 130..378 + |
| 1622928637.2763774-UTR-H-canaliculatus_F_contig10094:2188..2403 | 1622928637.2763774-UTR-H-canaliculatus_F_contig10094:2188..2403 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig10094 2189..2403 + |
| 1696845506.7639952-UTR-H-canaliculatus_F_contig10094:2188..2403 | 1696845506.7639952-UTR-H-canaliculatus_F_contig10094:2188..2403 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig10094 2189..2403 + |
| 1622928637.2881405-UTR-H-canaliculatus_F_contig10094:3061..3218 | 1622928637.2881405-UTR-H-canaliculatus_F_contig10094:3061..3218 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig10094 3062..3218 + |
| 1696845506.7730772-UTR-H-canaliculatus_F_contig10094:3061..3218 | 1696845506.7730772-UTR-H-canaliculatus_F_contig10094:3061..3218 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig10094 3062..3218 + |
| 1622928637.2988584-UTR-H-canaliculatus_F_contig10094:3725..3948 | 1622928637.2988584-UTR-H-canaliculatus_F_contig10094:3725..3948 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig10094 3726..3948 + |
| 1696845506.7870917-UTR-H-canaliculatus_F_contig10094:3725..3948 | 1696845506.7870917-UTR-H-canaliculatus_F_contig10094:3725..3948 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig10094 3726..3948 + |
| 1622928637.3167036-UTR-H-canaliculatus_F_contig10094:4352..4491 | 1622928637.3167036-UTR-H-canaliculatus_F_contig10094:4352..4491 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig10094 4353..4491 + |
| 1696845506.8054574-UTR-H-canaliculatus_F_contig10094:4352..4491 | 1696845506.8054574-UTR-H-canaliculatus_F_contig10094:4352..4491 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig10094 4353..4491 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622928637.2283175-CDS-H-canaliculatus_F_contig10094:378..1020 | 1622928637.2283175-CDS-H-canaliculatus_F_contig10094:378..1020 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig10094 379..1020 + |
| 1696845506.7286026-CDS-H-canaliculatus_F_contig10094:378..1020 | 1696845506.7286026-CDS-H-canaliculatus_F_contig10094:378..1020 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig10094 379..1020 + |
| 1622928637.2425964-CDS-H-canaliculatus_F_contig10094:1071..1634 | 1622928637.2425964-CDS-H-canaliculatus_F_contig10094:1071..1634 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig10094 1072..1634 + |
| 1696845506.744157-CDS-H-canaliculatus_F_contig10094:1071..1634 | 1696845506.744157-CDS-H-canaliculatus_F_contig10094:1071..1634 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig10094 1072..1634 + |
| 1622928637.2615516-CDS-H-canaliculatus_F_contig10094:1920..2188 | 1622928637.2615516-CDS-H-canaliculatus_F_contig10094:1920..2188 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig10094 1921..2188 + |
| 1696845506.7549105-CDS-H-canaliculatus_F_contig10094:1920..2188 | 1696845506.7549105-CDS-H-canaliculatus_F_contig10094:1920..2188 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig10094 1921..2188 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10094.122.1 >prot_H-canaliculatus_F_contig10094.122.1 ID=prot_H-canaliculatus_F_contig10094.122.1|Name=mRNA_H-canaliculatus_F_contig10094.122.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=491bp
MPVHKEARPPLEDSSESHLWHAWPLGAVDVPHPLLPGDPAESPAEGEALV
VHAHLEPVARLLIQLQKSFGGLLFGTQWSKAWGLGGEWPQEVRAATSVRA
LGSLARELLEALPARVFRESWQTPYELKLSRAYKTEVEAAKAAVAAKEAA
AEAQARRVAAAAARELAGRQLAAEREEAAARAAAAAAAARGAREEGRPGA
GAAAAAAAAAAGGGEAAAGRADAWVANGVVFDAPSMPATPNGRLSGGSMP
SQGRGSSQSSPAAAGGGEGLGSAGATNNSHASADADGTDFRSPKKRRRSR
ATAAAAETAGAPLSLSPLRSSRGKRKASLGGGREAFGVGVGGRGGEDDDD
DGAVPGDARMTSGLDHSKMSDAAFDRMLADMEADRDDDRGAAGGGGGRAA
AESGSATRSSGGAGTSPRPAGSPRRPAWRGRWLAAARTGPSRVSATCPPR
GRRARRWTAPRCRCRRCGMRVWPAATARPSWQCTCGTSRP* back to topmRNA from alignment at H-canaliculatus_F_contig10094:130..4491+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-canaliculatus_F_contig10094.122.1 ID=mRNA_H-canaliculatus_F_contig10094.122.1|Name=mRNA_H-canaliculatus_F_contig10094.122.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=4362bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10094:130..4491+ (Hapterophycus canaliculatus Oshoro5f female)
GCCCAGTCCTACGCCAGAGCAGCAGCGGAGAGAAAGGCGAAGGCCGAGGC
GAGAACCAAAGCCGCCGCCGAAGCCAAGGCCGCTAAGGAGGCCGAGGCGC
GCCGCCGGCGCGAGGAGAAGCAGGCGGCCGAGAAGGCCGCCGCCCAGGCC
GCCGCGGACGCCGCCGCGCTGGCCAGGTCGCTCTACATCGCCTCCAGCAA
CCCCCTGGAGTACGTGAACCGGTACGCCAAGGCGATCCCGTACCCCGGGA
TGCCGGTCCACAAGGAAGCCCGGCCACCCCTCGAGGACTCTTCGGAGTCG
CACCTCTGGCACGCGTGGCCCCTGGGCGCGGTGGACGTGCCCCACCCCCT
GCTCCCCGGGGACCCCGCAGAATCGCCTGCGGAGGGGGAGGCGCTGGTGG
TGCACGCGCACCTCGAGCCCGTCGCGAGGCTCCTCATCCAGCTGCAGAAG
TCGTTCGGGGGGCTGCTGTTCGGGACGCAGTGGAGCAAGGCGTGGGGGCT
TGGGGGGGAGTGGCCCCAGGAGGTTAGGGCGGCCACCAGCGTCCGCGCGC
TGGGGAGTCTAGCGCGGGAGCTGCTGGAGGCGCTGCCTGCCCGGGTGTTC
CGGGAGTCTTGGCAGACACCGTACGAGCTGAAGCTGTCGCGGGCGTACAA
GACGGAGGTGGAGGCGGCGAAGGCGGCGGTGGCCGCGAAGGAGGCCGCGG
CTGAGGCCCAGGCGAGGAGGGTGGCGGCCGCGGCGGCGAGGGAGCTCGCG
GGCAGGCAGCTGGCGGCCGAGCGGGAGGAGGCCGCGGCCAGGGCCGCCGC
GGCCGCCGCCGCCGCGAGGGGGGCGAGAGAGGAGGGGCGTCCGGGGGCGG
GCGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGGAGGAGGAGTAAACGCG
TCTGCCGCGCAGTTTTCCTCCCGGCAGCGACAGGAGGAAGAGGAGGCGGC
GGCCGGGCGCGCCGACGCTTGGGTCGCGAACGGAGTCGTGTTCGACGCCC
CGTCGATGCCGGCCACTCCCAACGGGCGCCTCTCCGGCGGCTCGATGCCG
TCGCAAGGCAGAGGGTCGTCGCAGTCTTCGCCCGCGGCGGCGGGGGGTGG
AGAGGGCCTCGGCAGCGCCGGCGCGACGAATAATTCTCACGCCTCGGCCG
ACGCAGACGGCACCGACTTCCGCTCCCCGAAGAAGCGGCGGCGGTCGAGG
GCCACCGCCGCGGCCGCGGAGACGGCCGGTGCCCCGTTGTCGCTGTCTCC
TCTCCGGAGCAGCAGAGGGAAGCGCAAGGCCTCGCTCGGCGGGGGCAGGG
AGGCGTTCGGGGTGGGGGTCGGGGGGCGGGGGGGCGAGGACGACGACGAC
GACGGCGCCGTGCCCGGAGACGCCCGGATGACCTCCGGGCTCGATCACAG
CAAGATGTCCGACGCGGCGTTCGACCGGATGCTAGCCGACATGGAGGCGG
ACCGAGATGACGACCGGGGGGCGGCAGGGGGCGGAGGCGGCAGAGCCGCC
GCCGAGTCGCGGTCCTTTCCGCCCCAGGGTTACTTCGACACCTACCAGAG
GTGCGAGTGGCGAGTGCGCTGCTACTCGTCGGGGATCTTCGGCCGGCACG
GCCGGGGGGGGCACCGCTCGCCGGGGCAGAGAGGAGGGGGGTCCGCGGCG
GCGGCGGCGGCAGCGGCGGCGGCGGCTGCGGGGGCCCTGGCCCCTCCGCC
CCCGCCTTTCCCCACCTCGTCCTCGAAGCAGCGGCGTAGGACGAGGCGGC
GGAACCACGCCCTGTCCGCGTCGGCGCTCGCGGCGGCGGAGATCGGGGTC
GGCGACACGGTCCTCCGGGGGAGCAGGTACTTCCCCACGACCAGCCGGAA
GCCCCCGCCGTCCCGCCTGGCGCGGGCGGTGGCTCGCCGCGGCACGCACC
GGCCCATCCCGGGTTTCTGCTACGTGTCCCCCGCGGGGACGTCGAGCGCG
GCGGTGGACGGCGCCAAGGTGCCGGTGTCGGCGCTGTGGCATGCGCGTGT
GGCCCGCTGCAACAGCGCGGCCGAGCTGGCAGTGCACCTGCGGAACCTCC
AGGCCGTGATCGACGCGGACCTGGTGGAGCAGGCCACGTCGTCGGGGCTG
GGGGCGAGGGCGGCTCGAGGAGGCGGCGGCGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGCGGTGGGAGCGGCGGCGGTGATGACCAGGTCAACG
TGGTGGATGAGCGCTGGAGTTCCTCGGCGGGGGAGGTGGAGGTGTTGCTC
AAGATTTGGACCGCCGGGAGAAGGGTGAGATGTGTTCGGGGTTTCACGAC
TTGGGTGGATGTTTTGCCCGCGGAGAGGGGGAGGGGGGTCAGCCATCTTT
CGTACTGCCGTTTGGATGAATGGCTGGCATGCCTTTCCGGGTGATGTCTG
TCGACCGTTTGATCGACGCGGAGAGTTTTTCAGGACACGGGCGACTCCTC
CTTGACCCTGATAATCGCTTCGTGCGGCTCCTTTCAGGAGCAGTCTCGTG
TTGAGCCAGGCTTGATAGGAGAATAATAAAGGTTTCATCCCTGTGGAGGC
GTTCCGCCCTCGCCTGTCACGCACGCCCTCTTCAAGCGTGCCTGGGGGCA
CGTACGCAGCAACCGCGCGCGCAGACCCCCTCGCTGTGTCTTCCTGTTGT
GTTTTTGCAGCCCCTACGTCACGCTTGGTTCCTGCCGCGTACCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCGTCTCCGCATCCCTTGGTGTT
ACTCCTTGTGCTTTTTTTTCCCCCCCCCGACCCTCCACGTTCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCGCTTTCGTCCAGAGTCGCGAACGAGAGGTG
TGGGTGAAGGAGAGCGATCTGCGTCCCAAGGCGCTGTTGCAGTGGGTGGA
GTGGAGATCGATCGCCAAGCGGGACGCGGAGCTGACCGAGATCCAGCGAA
GACGGAGTCGGCGTCAGCGGCTGAAGGACAAGAAGCGCGGTGAGGGGTGA
ACCGGCGGGCGGGAGAGGGGTTCCCGACCGACGGACGCGCCGAAATTATT
TCGCACCCATTCATCGGTACTGGTTCCCTTCGACTCGAGGCCTTGCGGTT
CCCTGATTCCCGGCGGCGGAGAAAAAATCTGCCGGCTGGTGTTTCAGGCA
CGGCCTCCAGATATCCTCCCCATCCGCCTGGGTTACTCTCGTGTGGCCCT
TCGCTAGCGGTGTCGCTGGGGGGCCCGGCCGGGCGGGATTTCCCACTCTC
TTGATGGCGTTTTCGTGGCCCGTCGCCTCGTGACCGTCTCGCGCCTGCCC
CATCGGCTCCGAGAGATGCGAGCCCTCGAGGCGGTGACGGTAGGTAGAAA
GGCAGGTTTCCGGGCACCCTCAGCCCGCGACCCACCCCGCGAACAACAAT
CTTCCCGACCTTAACCTTCCGCCTTCCGGCTAACCCACCCACTCGCCTCC
CCCGCCTTTGCCTCTCCGCCGCCGCCGCCGCGTGCGACGCTCGCAGAGGA
AGAGCAGCGGGTGGCGCGGCTGCGGCAGATCCGGGCGGAGCGGTTCAAGT
CAGCGTTCTATTCGATCCTCAAGGCGCACGAGTCGGCGGTGACGACCCTC
CTGGAGGACGCGGCGGGGGCCGGGGCTGAAGGGGCGGACCCTGTGCGGCT
GGGGCAGGCGCGGCAGGTGGCCGTGGAGAGGCTGACGGAGAACTACGCCC
GTCGGCAGGAGACGGCCGGGTGAGTAGAGTAGGGTGTTGCTGTGCGGTGC
ATGGTGTTGTGTTGCCTTGTTGTTGATGGTTGGTGGTTTTGGTGTTTGTG
TCGTTGGTGTTGGTGTTGGTGTTGCTGTTGCTGTTGTTCTTGTTGTTATT
GTTTGTCGTTGTTGTTGTCGTTGTTGTTGTCGTCGTTGTGGTTGCTGTTG
TCGTTGCTGTTGCTGTTGTTGCTGTTGCTGTTGTTGTTGCTAGTGGGGAA
GCCGGAGAGGCCGTAGTCATCCGGTTGGCGGCAAACGGAAGAGTTGCGAT
TGGCCATCTCCGTAGATCTAGCCCTGCGGGTAGCGCGCGGAGGTCCTGGT
TCCATCTAAAACGCCTCCGTCTCCCGCGCTTCCCCCTCGCGCCTACCGCC
TTTTTGTCCCATCCCGGCGTAAGTTTTCCTAACGGCGAGATGATGAGGTG
GCAAGACATGATCCCTCAGCTGCAGCACCAGGTTATGGCTCCCCTGAAGG
AGGTCGAGGGGAACATCCTCGGCAAGTTCAGGCGGAGAGTAGAGGTGAGA
TCAAAAACGAGA back to topCoding sequence (CDS) from alignment at H-canaliculatus_F_contig10094:130..4491+ >mRNA_H-canaliculatus_F_contig10094.122.1 ID=mRNA_H-canaliculatus_F_contig10094.122.1|Name=mRNA_H-canaliculatus_F_contig10094.122.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2946bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10094:130..4491+ (Hapterophycus canaliculatus Oshoro5f female)
ATGCCGGTCCACAAGGAAGCCCGGCCACCCCTCGAGGACTCTTCGGAGTC
GCACCTCTGGCACGCGTGGCCCCTGGGCGCGGTGGACGTGCCCCACCCCC
TGCTCCCCGGGGACCCCGCAGAATCGCCTGCGGAGGGGGAGGCGCTGGTG
GTGCACGCGCACCTCGAGCCCGTCGCGAGGCTCCTCATCCAGCTGCAGAA
GTCGTTCGGGGGGCTGCTGTTCGGGACGCAGTGGAGCAAGGCGTGGGGGC
TTGGGGGGGAGTGGCCCCAGGAGGTTAGGGCGGCCACCAGCGTCCGCGCG
CTGGGGAGTCTAGCGCGGGAGCTGCTGGAGGCGCTGCCTGCCCGGGTGTT
CCGGGAGTCTTGGCAGACACCGTACGAGCTGAAGCTGTCGCGGGCGTACA
AGACGGAGGTGGAGGCGGCGAAGGCGGCGGTGGCCGCGAAGGAGGCCGCG
GCTGAGGCCCAGGCGAGGAGGGTGGCGGCCGCGGCGGCGAGGGAGCTCGC
GGGCAGGCAGCTGGCGGCCGAGCGGGAGGAGGCCGCGGCCAGGGCCGCCG
CGGCCGCCGCCGCCGCGAGGGGGGCGAGAGAGGAGGGGCGTCCGGGGGCG
GGCGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGGAGGAGGAATGCCGGT
CCACAAGGAAGCCCGGCCACCCCTCGAGGACTCTTCGGAGTCGCACCTCT
GGCACGCGTGGCCCCTGGGCGCGGTGGACGTGCCCCACCCCCTGCTCCCC
GGGGACCCCGCAGAATCGCCTGCGGAGGGGGAGGCGCTGGTGGTGCACGC
GCACCTCGAGCCCGTCGCGAGGCTCCTCATCCAGCTGCAGAAGTCGTTCG
GGGGGCTGCTGTTCGGGACGCAGTGGAGCAAGGCGTGGGGGCTTGGGGGG
GAGTGGCCCCAGGAGGTTAGGGCGGCCACCAGCGTCCGCGCGCTGGGGAG
TCTAGCGCGGGAGCTGCTGGAGGCGCTGCCTGCCCGGGTGTTCCGGGAGT
CTTGGCAGACACCGTACGAGCTGAAGCTGTCGCGGGCGTACAAGACGGAG
GTGGAGGCGGCGAAGGCGGCGGTGGCCGCGAAGGAGGCCGCGGCTGAGGC
CCAGGCGAGGAGGGTGGCGGCCGCGGCGGCGAGGGAGCTCGCGGGCAGGC
AGCTGGCGGCCGAGCGGGAGGAGGCCGCGGCCAGGGCCGCCGCGGCCGCC
GCCGCCGCGAGGGGGGCGAGAGAGGAGGGGCGTCCGGGGGCGGGCGCGGC
GGCGGCGGCGGCGGCGGCGGCGGCGGGAGGAGGAGAGGCGGCGGCCGGGC
GCGCCGACGCTTGGGTCGCGAACGGAGTCGTGTTCGACGCCCCGTCGATG
CCGGCCACTCCCAACGGGCGCCTCTCCGGCGGCTCGATGCCGTCGCAAGG
CAGAGGGTCGTCGCAGTCTTCGCCCGCGGCGGCGGGGGGTGGAGAGGGCC
TCGGCAGCGCCGGCGCGACGAATAATTCTCACGCCTCGGCCGACGCAGAC
GGCACCGACTTCCGCTCCCCGAAGAAGCGGCGGCGGTCGAGGGCCACCGC
CGCGGCCGCGGAGACGGCCGGTGCCCCGTTGTCGCTGTCTCCTCTCCGGA
GCAGCAGAGGGAAGCGCAAGGCCTCGCTCGGCGGGGGCAGGGAGGCGTTC
GGGGTGGGGGTCGGGGGGCGGGGGGGCGAGGACGACGACGACGACGGCGC
CGTGCCCGGAGACGCCCGGATGACCTCCGGGCTCGATCACAGCAAGATGT
CCGACGCGGCGTTCGACCGGATGCTAGCCGACATGGAGGCGGACCGAGAT
GACGACCGGGGGGCGGCAGGGGGCGGAGGCGGCAGAGCCGCCGCCGAGAG
GCGGCGGCCGGGCGCGCCGACGCTTGGGTCGCGAACGGAGTCGTGTTCGA
CGCCCCGTCGATGCCGGCCACTCCCAACGGGCGCCTCTCCGGCGGCTCGA
TGCCGTCGCAAGGCAGAGGGTCGTCGCAGTCTTCGCCCGCGGCGGCGGGG
GGTGGAGAGGGCCTCGGCAGCGCCGGCGCGACGAATAATTCTCACGCCTC
GGCCGACGCAGACGGCACCGACTTCCGCTCCCCGAAGAAGCGGCGGCGGT
CGAGGGCCACCGCCGCGGCCGCGGAGACGGCCGGTGCCCCGTTGTCGCTG
TCTCCTCTCCGGAGCAGCAGAGGGAAGCGCAAGGCCTCGCTCGGCGGGGG
CAGGGAGGCGTTCGGGGTGGGGGTCGGGGGGCGGGGGGGCGAGGACGACG
ACGACGACGGCGCCGTGCCCGGAGACGCCCGGATGACCTCCGGGCTCGAT
CACAGCAAGATGTCCGACGCGGCGTTCGACCGGATGCTAGCCGACATGGA
GGCGGACCGAGATGACGACCGGGGGGCGGCAGGGGGCGGAGGCGGCAGAG
CCGCCGCCGAATCGGGGTCGGCGACACGGTCCTCCGGGGGAGCAGGTACT
TCCCCACGACCAGCCGGAAGCCCCCGCCGTCCCGCCTGGCGCGGGCGGTG
GCTCGCCGCGGCACGCACCGGCCCATCCCGGGTTTCTGCTACGTGTCCCC
CGCGGGGACGTCGAGCGCGGCGGTGGACGGCGCCAAGGTGCCGGTGTCGG
CGCTGTGGCATGCGCGTGTGGCCCGCTGCAACAGCGCGGCCGAGCTGGCA
GTGCACCTGCGGAACCTCCAGGCCGTGAATCGGGGTCGGCGACACGGTCC
TCCGGGGGAGCAGGTACTTCCCCACGACCAGCCGGAAGCCCCCGCCGTCC
CGCCTGGCGCGGGCGGTGGCTCGCCGCGGCACGCACCGGCCCATCCCGGG
TTTCTGCTACGTGTCCCCCGCGGGGACGTCGAGCGCGGCGGTGGACGGCG
CCAAGGTGCCGGTGTCGGCGCTGTGGCATGCGCGTGTGGCCCGCTGCAAC
AGCGCGGCCGAGCTGGCAGTGCACCTGCGGAACCTCCAGGCCGTGA back to top
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