prot_H-canaliculatus_F_contig1126.1136.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1126.1136.1
Unique Nameprot_H-canaliculatus_F_contig1126.1136.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length408
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1126.1136.1 vs. uniprot
Match: A0A6H5JQS7_9PHAE (VHS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQS7_9PHAE)

HSP 1 Score: 405 bits (1040), Expect = 1.090e-128
Identity = 314/425 (73.88%), Postives = 336/425 (79.06%), Query Frame = 0 
Query:    1 MRRIRKCFKSGNAQVVLRALDLTDVLMQSCGAHARREVSSDKFLKLVGKLCKVTKTRLDPSWQSVSERAQELIAGWAETSERTVGAGNRFTQMYENLRRDGVPFRRGSGXXXXXDSGALRSVGAAMARXXXXXXX----------RFRSSGGAPLRPGDEGYDEEADLAAAIFASSISAGGGGIGSGAAALGA--------SGLPAADESGELLSRVPPTIEALMDIMEGSKDLTELLENEVAPDVVDQMRSLVEQVVKKVEELEREGNPDEKDMDRYLTAHDDLQTVLRLYEGVLDGDKTLPLPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSASGGRRSPARGNLLDLEENTPLETGMTGEGAGGMLVAYTDGQFMASS 407
            MRRIRKCFKS N QVVLRALDLTD LMQSCG+HARREVSSDKFLK++GKLCKVTKTRLDPSWQ VSERAQEL+AGWA  SER VG+G+RFTQ+YENLRRDGVPFR GS XXXXX              XXXXXXX          RFRS+GG+ LRPGDE YDEEADLAAAIFASSIS   G +                 SGLP A E+GELLS VPPTIEALMDIMEGSKDLTELL NEVAPDVVDQ R LV+QV+KKVE+L + GNPDEKD+DRYL AHDDLQTVLR+YEGV+DG +TLPL R   XXX    XXXXXXXXXXXXXXXXXXXXXX    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         GR SPARGNLLDLEENTPL+T MTGEGAGGM+VAYTDGQFMAS+
Sbjct:   60 MRRIRKCFKSSNTQVVLRALDLTDTLMQSCGSHARREVSSDKFLKVIGKLCKVTKTRLDPSWQMVSERAQELVAGWA--SERMVGSGSRFTQLYENLRRDGVPFRGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRFRSAGGSVLRPGDESYDEEADLAAAIFASSIS---GTVXXXXXXXXXXXXXRAVNSGLPTA-ENGELLSMVPPTIEALMDIMEGSKDLTELLGNEVAPDVVDQTRDLVQQVIKKVEDLGQSGNPDEKDLDRYLKAHDDLQTVLRVYEGVVDGSETLPLSRRGGXXXTRGTXXXXXXXXXXXXXXXXXXXXXXTAYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------GRSSPARGNLLDLEENTPLDTSMTGEGAGGMMVAYTDGQFMAST 469
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BLAST of mRNA_H-canaliculatus_F_contig1126.1136.1 vs. uniprot
Match: D8LEH3_ECTSI (VHS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEH3_ECTSI)

HSP 1 Score: 372 bits (954), Expect = 1.830e-122
Identity = 218/301 (72.43%), Postives = 238/301 (79.07%), Query Frame = 0 
Query:    1 MRRIRKCFKSGNAQVVLRALDLTDVLMQSCGAHARREVSSDKFLKLVGKLCKVTKTRLDPSWQSVSERAQELIAGWAETSERTVGAGNRFTQMYENLRRDGVPFRRGSGXXXXXDSGALRSVGAAMARXXXXXXX---------RFRSSGGAPLRPGDEGYDEEADLAAAIFASSISAGGGGIGSGAAALGA----SGLPAADESGELLSRVPPTIEALMDIMEGSKDLTELLENEVAPDVVDQMRSLVEQVVKKVEELEREGNPDEKDMDRYLTAHDDLQTVLRLYEGVLDGDKTLPLPR 288
            MRRIRKCFKS N QVVLRALDLTD LMQSCG+HARREVSSDKFLKL+GKLCKVTKTRLDPSWQ+VSERAQ+L+ GWAE SER VG+G+RFTQ+YENLRRDGV FR GSG       G   ++GA    XXXXXXX         RFRS+GG+ LRPGDEGYDEEADLAAAIFASSIS                   SGLP A E+GELLS VPPTIEALMDIMEGSKDLTELL NEVAPDVVDQ R LV+QV+KKVE+L   GNPDEKD+DRYL AHDDLQTVLR+YEGV+DG +TLPL R
Sbjct:   60 MRRIRKCFKSSNTQVVLRALDLTDTLMQSCGSHARREVSSDKFLKLIGKLCKVTKTRLDPSWQTVSERAQDLVVGWAEASERMVGSGSRFTQLYENLRRDGVLFRGGSG-----SGGRNGAIGAXXXXXXXXXXXXXXXXXXXXRFRSAGGSVLRPGDEGYDEEADLAAAIFASSISGTXXXXXXXXXXXXXXAVNSGLPTA-ENGELLSMVPPTIEALMDIMEGSKDLTELLGNEVAPDVVDQTRDLVQQVIKKVEDLGHSGNPDEKDLDRYLKAHDDLQTVLRVYEGVVDGSETLPLSR 354
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1126.1136.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JQS7_9PHAE1.090e-12873.88VHS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LEH3_ECTSI1.830e-12272.43VHS domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 229..249
NoneNo IPR availablePANTHERPTHR45898FAMILY NOT NAMEDcoord: 2..331
NoneNo IPR availablePANTHERPTHR45898:SF2TARGET OF MYB PROTEIN 1coord: 2..331
NoneNo IPR availableSUPERFAMILY89009GAT-like domaincoord: 189..280
IPR008942ENTH/VHSGENE3D1.25.40.90coord: 1..108
e-value: 2.1E-18
score: 68.4
IPR008942ENTH/VHSSUPERFAMILY48464ENTH/VHS domaincoord: 1..104
IPR002014VHS domainPFAMPF00790VHScoord: 1..101
e-value: 1.1E-10
score: 41.5
IPR002014VHS domainPROSITEPS50179VHScoord: 1..105
score: 17.719

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1126contigH-canaliculatus_F_contig1126:1248..5141 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1126.1136.1mRNA_H-canaliculatus_F_contig1126.1136.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1126 1236..5141 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1126.1136.1 ID=prot_H-canaliculatus_F_contig1126.1136.1|Name=mRNA_H-canaliculatus_F_contig1126.1136.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=408bp
MRRIRKCFKSGNAQVVLRALDLTDVLMQSCGAHARREVSSDKFLKLVGKL
CKVTKTRLDPSWQSVSERAQELIAGWAETSERTVGAGNRFTQMYENLRRD
GVPFRRGSGGGGGGDSGALRSVGAAMARGGGGGGGRFRSSGGAPLRPGDE
GYDEEADLAAAIFASSISAGGGGIGSGAAALGASGLPAADESGELLSRVP
PTIEALMDIMEGSKDLTELLENEVAPDVVDQMRSLVEQVVKKVEELEREG
NPDEKDMDRYLTAHDDLQTVLRLYEGVLDGDKTLPLPRGGGGGGRGMGEA
TAAAEAAFAAAATGANGNGNASAYSSDDDRAGGTAGQDGSGASAGAGAGV
GAEAAAAAFSASGGRRSPARGNLLDLEENTPLETGMTGEGAGGMLVAYTD
GQFMASSA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002014VHS_dom
IPR008942ENTH_VHS