mRNA_H-canaliculatus_F_contig1125.1129.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1125.1129.1 vs. uniprot
Match: A0A6H5KBU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU0_9PHAE) HSP 1 Score: 412 bits (1058), Expect = 3.240e-135 Identity = 214/335 (63.88%), Postives = 240/335 (71.64%), Query Frame = 3
Query: 462 MEVLSGGAGSDRPXXXXXRRYLRRQSSLKLSASDMFLFRPPSPTYVATSWPGELCVLGSSVCLALERAGGASRVLLFCHGTSSDLGMSRRSLETLRDGLDCHVVGVEYPGYGLTAIGEPSEESINAAVRVAFLHITEA-------------------------------------FTGVGDIAGSIVGETLASMFNFNQWNNKEEVAGTTSPTLILHGLKDKVVPHTHGLDLYRASAAATKYVGLLLESDHNRISWDVVCDTYAKPFMEMACPDEADRMLGVQPSDVQKLANFDPSGNGALILACARAAWTRRR---GEENQHGGAPSSAQSTEF 1346
ME+LSG A SDRP RRY +RQ+S LS SDMFLFRPP PTYVATSWPGELCVLGSSVCLALER GGAS+VLLFCHGTSSDLGM+RRSLETL D LDCHV+GVEYPGYGL E +E+S+NAAVRVAFLH+TE FTGVGD+A SIVG TLASMFN NQW+NK+ VA TT PTL+LHGLKD+VVPHTH L+LYRASAA TKYV LL +SDHNRI W V C+ YAKPFMEMACP E R LG++P DV KL+NFDPSG LILACA+AAW RR G + GG+P + +F
Sbjct: 1 MEILSGRA-SDRPRPPPGRRYFQRQASFSLSPSDMFLFRPPKPTYVATSWPGELCVLGSSVCLALERNGGASKVLLFCHGTSSDLGMTRRSLETLGDMLDCHVIGVEYPGYGLMTHDESNEQSVNAAVRVAFLHMTEVMGWPADRVVVMGRSLGSGPAACLAREFQPGALFLLAPFTGVGDMAESIVGGTLASMFNLNQWDNKKAVAETTCPTLVLHGLKDQVVPHTHSLELYRASAATTKYVALLFDSDHNRIGWRVACELYAKPFMEMACPAETKRALGIRPMDVAKLSNFDPSGKATLILACAKAAWARRGVGVGGQACGGGSPQGEAAADF 334
BLAST of mRNA_H-canaliculatus_F_contig1125.1129.1 vs. uniprot
Match: D8LMJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMJ7_ECTSI) HSP 1 Score: 309 bits (791), Expect = 2.210e-99 Identity = 163/242 (67.36%), Postives = 177/242 (73.14%), Query Frame = 3
Query: 462 MEVLSGGAGSDRPXXXXXRRYLRRQSSLKLSASDMFLFRPPSPTYVATSWPGELCVLGSSVCLALERAGGASRVLLFCHGTSSDLGMSRRSLETLRDGLDCHVVGVEYPGYGLTAIGEPSEESINAAVRVAFLHITEA-------------------------------------FTGVGDIAGSIVGETLASMFNFNQWNNKEEVAGTTSPTLILHGLKDKVVPHTHGLDLYRASAAATKY 1076
ME+LSG A SDRP RRY +RQ+S LS SDMFLFRPP PTYVATSWPGELCVLGSSVCLALER GGAS+VLLFCHGTSSDLGM+RRSLETL D LDCHV+GVEYPGYGL A E +E+S+NAAVRVAFLHITE FTGVGD+A SIVG TLASMFN NQW+NK+ VA TT PTL+LHGLKD+VVPHTH LDLYRASAA TKY
Sbjct: 1 MEILSGRA-SDRPRPPPGRRYFQRQTSFSLSPSDMFLFRPPKPTYVATSWPGELCVLGSSVCLALERIGGASKVLLFCHGTSSDLGMTRRSLETLGDMLDCHVIGVEYPGYGLMAHDESNEQSVNAAVRVAFLHITEVMGWPADRVVVMGRSLGSGPAACLAREFQPGALFLLAPFTGVGDMAESIVGGTLASMFNLNQWDNKKAVAETTCPTLVLHGLKDQVVPHTHSLDLYRASAATTKY 241
BLAST of mRNA_H-canaliculatus_F_contig1125.1129.1 vs. uniprot
Match: A0A1R2ASI8_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2ASI8_9CILI) HSP 1 Score: 96.3 bits (238), Expect = 1.360e-18 Identity = 73/262 (27.86%), Postives = 115/262 (43.89%), Query Frame = 3
Query: 570 LFRPPSPTYVATSWPGELC--------VLGSSVCLALERAGGASRVLLFCHGTSSDLGMSRRSLETLRDGLDCHVVGVEYPGYGL-----------------------------------TAIGEPSEESINAAVRVAFLHITEAFTGVGDIAGSIVGETLASMFNFNQWNNKEEVAGTTSPTLILHGLKDKVVPHTHGLDLYRASAAATKYVGLLLESDHNRISWDVVCDTYAKPFMEMACPDEADRM---LGVQPSDVQK 1217
LF PSP+Y+A ++PGEL L S CL L G+S+ ++F HG + D+G++ L LR L H++GVEYPGYG+ +IG + + VR A L + A+T + + IVG + A F +++ N + +A P +LHG KD ++P+ H DL A + L + DHN + F ++ P A M + +QP+++ K
Sbjct: 7 LFPAPSPSYMADTFPGELIWIPQLKNKELPSIPCLYLSCQKGSSKSVIFFHGNAEDIGLAYELLNHLRVTLQVHIIGVEYPGYGIYEGNCSEKRIYEDAMNVFQFLLSTGIEQSDIIIFGRSIGSGPACYLASKVRPAALLLMSAYTSIRNAVKFIVG-SFAQYFIKDRFRNIDFIAKVKCPVFLLHGQKDTMIPYEHSQDLRDKCAGPCSMI-LPVNMDHNEFDF----------FEDLTLPFSAFLMQHGIAIQPTNISK 256
BLAST of mRNA_H-canaliculatus_F_contig1125.1129.1 vs. uniprot
Match: A0A1R2CXL3_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CXL3_9CILI) HSP 1 Score: 94.4 bits (233), Expect = 6.270e-18 Identity = 71/263 (27.00%), Postives = 112/263 (42.59%), Query Frame = 3
Query: 570 LFRPPSPTYVATSWPGELCV--------LGSSVCLALERAGGASRVLLFCHGTSSDLGMSRRSLETLRDGLDCHVVGVEYPGYGLTAIGEPSEESIN------------------------------------AAVRVAFLHITEAFTGVGDIAGSIVGETLASMFNFNQWNNKEEVAGTTSPTLILHGLKDKVVPHTHGLDLYRASAAATKYVGLLLESDHNRISWDVVCDTYAKPFMEMACPDEADRM---LGVQPSDVQK 1217
LF P P+Y A ++PGE+ L S CL L G+S+ ++F HG + D+G++ L LR L H++GVEYPGYG+ GE +E+ +N + V+ A L + A+T + D I G+ A ++ N + + P +LHG KD ++P+ H DL A + L DHN + F ++A P A M + +QP+++ K
Sbjct: 7 LFPAPQPSYDADTFPGEIIWIPQLKFKHLPSIPCLYLSCQKGSSKTIVFFHGNAEDIGLAYELLNYLRINLQVHIIGVEYPGYGIYE-GECTEQRVNEDAVNVFQFLLTTGIEPNEIILFGRSIGSGPACYLASTVQPASLLLMSAYTSIRDAVKCIAGK-FAQYLIKERFRNIDNITNVRCPVFLLHGQKDTMIPYGHSQDLRDKCAGPCSMI-LPANMDHNEFDF----------FEDLALPFSAFLMQHGISIQPTNISK 256
BLAST of mRNA_H-canaliculatus_F_contig1125.1129.1 vs. uniprot
Match: A0A7S1GZY8_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1GZY8_HEMAN) HSP 1 Score: 90.9 bits (224), Expect = 2.560e-16 Identity = 68/225 (30.22%), Postives = 99/225 (44.00%), Query Frame = 3
Query: 567 FLFRPPSP-TYVATSWPGELCVL----GSSVCLALERAGGASRVLLFCHGTSSDLGMSRRSLETLRDGLDCHVVGVEYPGYGLTAIGEPSEESINAAVRVAFLHITEAFT-------GVGDIAGSIVGETLASMFN---------------------------------FNQWNNKEEVAGTTSPTLILHGLKDKVVPHTHGLDLYRASAAATKYVGLLLESDHN 1106
FLF P+P TY+ S+PG+L L GS GA L++ HG + DLG+S L+ RD L+ HV+GVEYPGYG A G E +N R AF +T+ G G+ L S+ N ++++N+ ++ SPTLI+HG +D+++P H LY A K + ++ DHN
Sbjct: 38 FLFAAPTPATYIERSFPGDLLWLDDGEGSKFPNIFLCKEGACCCLVYLHGNAEDLGLSHDLLKAFRDFLNVHVMGVEYPGYG-PAPGNACEGGVNRHTRAAFNFLTQKLRIPPQRIIVFGRSIGTGPATNLVSILNRSNKHAAALVLQSPYRSIKTLAKELVGAVANIIMDRFDNEADIVHCISPTLIIHGRQDELIPVLHASVLYERCGAEAKCLEIIEGVDHN 261
BLAST of mRNA_H-canaliculatus_F_contig1125.1129.1 vs. uniprot
Match: A0A6A7G9Q5_9CRUS (Alpha/beta superfamily hydrolase n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G9Q5_9CRUS) HSP 1 Score: 87.8 bits (216), Expect = 1.010e-14 Identity = 61/239 (25.52%), Postives = 102/239 (42.68%), Query Frame = 3
Query: 570 LFRPPSPTYVATSWPGELCVLGSSVC----------------------LALERAGGASRVLLFCHGTSSDLGMSRRSLETLRDGLDCHVVGVEYPGYGLTAIGEPSEESINAAVRVAF-------------------------------------LHITEAFTGVGDIAGSIVGETLASMFNFNQWNNKEEVAGTTSPTLILHGLKDKVVPHTHGLDLYRASAAATKY-VGLLLESDHN 1106
LF P+ Y A S+P +LC + + C L L + R++L+ HG DLG + R + LRD L CHV+ +EYPGYG+ A G +E S+NA AF L + F+ + D+ + G A++ ++++N + + P +++HGL DK++P++H L+RA+ + + + DHN
Sbjct: 15 LFPAPTTQYTANSFPRQLCWIPRNECDRPDSERFGEEPLSNKDDRVPCLWLPYHRPSKRIILYGHGNGEDLGNTHRFIRMLRDNLKCHVLAIEYPGYGINA-GVSTETSVNADFTTAFHFVLSDMGFRLEDILLFGRSIGSGPCCQLAARHKVGGLVLVSPFSSIRDMTRHLAGRVAAALVA-DRFSNIQAIMKVEVPLILIHGLADKLIPYSHSQLLFRAAEKTPRRAIHFPEDMDHN 251
BLAST of mRNA_H-canaliculatus_F_contig1125.1129.1 vs. uniprot
Match: A0A1R2BEE6_9CILI (Uncharacterized protein n=2 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2BEE6_9CILI) HSP 1 Score: 83.2 bits (204), Expect = 4.940e-14 Identity = 62/232 (26.72%), Postives = 98/232 (42.24%), Query Frame = 3
Query: 570 LFRPPSPTYVATSWPGELCVLGSSV--------CLALERAGGASRVLLFCHGTSSDLGMSRRSLETLRDGLDCHVVGVEYPGYGL------------------------------------TAIGEPSEESINAAVRVAFLHITEAFTGVGDIAGSIVGETLASMFNFNQWNNKEEVAGTTSPTLILHGLKDKVVPHTHGLDLYRASAAATKYVGLLLESDHNRISWDVVCD 1133
LF P +Y A+ +PGE + V CL L A G+S+ +++ HG + DLGMS L L L HV+GVEYPGYG+ +IG + + +V L + +T + ++A SIVG+ F +++ N + + T P I+HG D ++P+ + LY+ + + LLL N +D D
Sbjct: 7 LFPAPKSSYTASLFPGEFIAIPRKVSKGPTPIPCLFLSTARGSSKTMIYFHGNAEDLGMSYELLCHLSSALRMHVIGVEYPGYGIYNGKCTEKKILSDSEDIYNYLTQNMKIKGEDIILFGRSIGTGPATWLASEKKVGGLLLMSGYTCIREVAKSIVGKVFM-YFIKDRFRNIDWIKKVTVPAFIVHGQSDTLIPYDQSIRLYKNCNSPSS---LLLPESMNHNEFDFFDD 234
BLAST of mRNA_H-canaliculatus_F_contig1125.1129.1 vs. uniprot
Match: A0A078APS4_STYLE (Uncharacterized protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078APS4_STYLE) HSP 1 Score: 83.6 bits (205), Expect = 1.670e-13 Identity = 52/210 (24.76%), Postives = 92/210 (43.81%), Query Frame = 3
Query: 645 CLALERAGGASRVLLFCHGTSSDLGMSRRSLETLRDGLDCHVVGVEYPGYGLTAIGEPSEESINAAVRVAFLHITE-------------------------------------AFTGVGDIAGSIVGET--LASMFNFNQWNNKEEVAGTTSPTLILHGLKDKVVPHTHGLDLYRASAAATKYVGLLLESDHNRISWDVVCDTYAKPFME 1157
CL + + GA +++++ HG + D+G++ L + + H++ VEYPGYGL P E I + F ++T+ +T + D++ S++G+ L + + ++ N + + P LHGLKDK++PH+H +DL +A + Y+ L DHN + D PF E
Sbjct: 129 CLYMPQDDGAKKLVIYFHGNAEDIGLAFDLLYQFGNEMRMHILAVEYPGYGLYKTSAPDENKIKEDADIIFDYLTKFVGINPIDIILFGRSMGSGPATYLSSKNKAFSLLLMSPYTSIKDVSRSLLGKLSFLLTPIVYERFRNIDMMKDAQCPVFFLHGLKDKLIPHSHSMDLNQACPMIS-YMHLPPNMDHNEFDF---IDDLVNPFKE 334
BLAST of mRNA_H-canaliculatus_F_contig1125.1129.1 vs. uniprot
Match: J9I661_9SPIT (Uncharacterized protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9I661_9SPIT) HSP 1 Score: 82.4 bits (202), Expect = 4.420e-13 Identity = 57/237 (24.05%), Postives = 101/237 (42.62%), Query Frame = 3
Query: 645 CLALERAGGASRVLLFCHGTSSDLGMSRRSLETLRDGLDCHVVGVEYPGYGLTAIGEPSEESINAAVRVAFLHITE-------------------------------------AFTGVGDIAGSIVGET--LASMFNFNQWNNKEEVAGTTSPTLILHGLKDKVVPHTHGLDLYRASAAATKYVGLLLESDHNRISWDVVCDTYAKPFMEMACPDEADRMLGVQPSDVQKLANFDPS 1238
CL + + GA +++++ HG + D+G++ L + + H++ VEYPGYGL P E I + F ++T+ +T + D++ S++G+ L + + ++ N + + P LHGLKD+++PH+H +DL +A + ++ L DHN + D PF + R LG D QK+ D S
Sbjct: 125 CLYMPQDDGAKKIVMYFHGNAEDIGLAFDLLYQFGNEMRMHILAVEYPGYGLYKTSPPDETKIKEDADIIFDYLTKFVGVHPSDIILFGRSMGSGPATYLASKNKAFSLLLMSPYTSIKDVSRSLLGKLSFLLTPIVYERFRNIDMMKDARCPVFFLHGLKDRLIPHSHSMDLNQACPMVS-FMHLPPNMDHNEFDF---IDDLVNPFKDFI------RRLG----DEQKIVKSDNS 347
BLAST of mRNA_H-canaliculatus_F_contig1125.1129.1 vs. uniprot
Match: A0A813CC03_9DINO (Aho-3 protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A813CC03_9DINO) HSP 1 Score: 77.4 bits (189), Expect = 1.580e-11 Identity = 62/202 (30.69%), Postives = 92/202 (45.54%), Query Frame = 3
Query: 570 LFRPPSPTYVATSWPGELCVL----GSSV-CLALERAGGASRVLLFCHGTSSDLGMSRRSLETLRDGLDCHVVGVEYPGYGLTAIGEPSEESI----NAAVRVAFLHI------------------TEAFTGVGDIAGSIVGETLASMFNF-------------NQWNNKEEVAGTTSPTLILHGLKDKVVPHTHGLDLYRA 1055
+F P+P+Y S+PGEL ++ G+ V CL L A + ++ H + DLG+S LRD HV+ VEYPGYG+ G E + +AA+ A H+ T A DIAG I+ S+ + N++ N + +SPTLI+HG++D +VP HG +Y A
Sbjct: 19 IFPAPTPSYTVNSFPGELILIPREDGAKVPCLFLPFQ-HARFLFIYFHANAEDLGLSHTFCTILRDLFQVHVLAVEYPGYGICH-GTCDEAGVMANASAAMEFAIHHLKWPRDGIKLFGRSLGTGPTMALAARHDIAGVILISPFTSIKDLFHGQVGFLADMVENRFCNLDLAPRISSPTLIIHGMQDALVPPEHGRKVYAA 218 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1125.1129.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1125.1129.1 >prot_H-canaliculatus_F_contig1125.1129.1 ID=prot_H-canaliculatus_F_contig1125.1129.1|Name=mRNA_H-canaliculatus_F_contig1125.1129.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=372bp MEVLSGGAGSDRPPPPPGRRYLRRQSSLKLSASDMFLFRPPSPTYVATSWback to top mRNA from alignment at H-canaliculatus_F_contig1125:5862..14281+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1125.1129.1 ID=mRNA_H-canaliculatus_F_contig1125.1129.1|Name=mRNA_H-canaliculatus_F_contig1125.1129.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=8420bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1125:5862..14281+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1125:5862..14281+ >mRNA_H-canaliculatus_F_contig1125.1129.1 ID=mRNA_H-canaliculatus_F_contig1125.1129.1|Name=mRNA_H-canaliculatus_F_contig1125.1129.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2232bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1125:5862..14281+ (Hapterophycus canaliculatus Oshoro5f female)back to top |