mRNA_H-canaliculatus_F_contig11242.1120.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig11242.1120.1
Unique NamemRNA_H-canaliculatus_F_contig11242.1120.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig11242.1120.1 vs. uniprot
Match: A0A6H5L061_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L061_9PHAE)

HSP 1 Score: 312 bits (799), Expect = 1.750e-103
Identity = 144/213 (67.61%), Postives = 175/213 (82.16%), Query Frame = 1
Query:  367 FRHPISRLVSAYFYCKQRGRDELCASTIVKADNIDLHTFAEHWGNYALRQFSLAFVRADEVFAAEQKRGIPGRPVEFPGWYRVKEYFESLEGTEEARSLLHGSRVRNDLAMHRLLQPVEDLLSNSYSAVGILEQWEKSMKLFNRALKLPHFDWPSASKTLGRQNIDERLRHEEARALHSAWDDPIIKDRLWLDLLLYNHAVSVHNRQVAEHGV 1005
            ++ PI RLVSAYFYCKQ G DELCAS ++KA N DLHTFA+HWGNY LRQFSLAFV A++VFAAEQ+RGI GRPV FPGWYRVKEYFE+    E+ R+L+  +   NDLAM  LLQPVEDLLS +YSAVGILE+WE SM LFN+ALK+P F+W +AS+ LGR+N+D+RL  EEA AL +AWDDP++   LWLD+ LY+HAV+VHN+QV EHG+
Sbjct:   18 YKCPIPRLVSAYFYCKQNGWDELCASMVLKAGNTDLHTFAKHWGNYGLRQFSLAFVGAEDVFAAEQERGIDGRPVMFPGWYRVKEYFENQFDVEQERALMQETGASNDLAMSYLLQPVEDLLSRNYSAVGILEKWETSMTLFNKALKVPSFNWQTASRNLGRKNVDKRLHDEEAHALRAAWDDPVLAKTLWLDIFLYDHAVAVHNKQVEEHGI 230          
BLAST of mRNA_H-canaliculatus_F_contig11242.1120.1 vs. uniprot
Match: D7FS84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS84_ECTSI)

HSP 1 Score: 243 bits (620), Expect = 2.290e-75
Identity = 133/301 (44.19%), Postives = 185/301 (61.46%), Query Frame = 1
Query:  157 KAGGSTVNSLIHSSMSKMQSSVGLYTNHHWMREKDKPDK--GAETRKHAMTFGAYTEALRSHRG---QDCKWFTMFRHPISRLVSAYFYCKQRGRDELCASTIV--KADNIDLHTFAEHWGNYALRQFSLAFVRADEVFAAEQKRGIPGRPVEF------PGWYRVKEYFES-LEGTEEARSLL----HGSRVRNDLAMHRLLQPVEDLLSNSYSAVGILEQWEKSMKLFNRALKLPHFDWPSASKTLGRQNIDERLRHEEARALHSAWDDPIIKDRLWLDLLLYNHAVSVHNRQVAEHGV 1005
            KAGGSTV  ++         +VGLY +  W+  KD      G E    ++ +GAYTE LR   G   ++CKWFT+FRHPI RLVSAYFYCK++ +D LCA+  +   AD+ DL+ FAEHWG++ LRQF+LAFV  +E+ A + K    G    +      PGWY +K Y +  L+  E+          G+       +  LLQPV++LL+N Y+AVG+LEQWE S+ LFN AL +P FDWP    ++G++N D    +EEA  L  +W DP ++  L LDLLLY++AVSVHN+QV ++G+
Sbjct:    3 KAGGSTVKYMLAPWTKAQNVTVGLYDSPQWLEGKDFAQDFLGDEN---SLMWGAYTEGLRPFGGLGLRECKWFTIFRHPIPRLVSAYFYCKKKPQDGLCATVALDANADDTDLYAFAEHWGDFGLRQFALAFVLPEELLANKVKYDATGICTPYHGKRSCPGWYELKLYLQQQLDEQEQGEGSRGWDGSGAAASGAATISHLLQPVQELLTNEYAAVGVLEQWETSLLLFNEALGMPGFDWPETFGSIGKKNSDGTFHNEEAEMLLRSWTDPRLRRYLSLDLLLYDYAVSVHNQQVDKYGL 300          
BLAST of mRNA_H-canaliculatus_F_contig11242.1120.1 vs. uniprot
Match: A0A6H5JY77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY77_9PHAE)

HSP 1 Score: 235 bits (599), Expect = 1.040e-71
Identity = 120/300 (40.00%), Postives = 174/300 (58.00%), Query Frame = 1
Query:  130 DCWIFIHLVKAGGSTVNSLIHSSMSKMQSSVGLYTNHHWMREKDKPDKGAETRKHAMTFGAYTEALRSHRGQDCKWFTMFRHPISRLVSAYFYCKQRGRDELCASTIVKADNIDLHTFAEHWGNYALRQFSLAFVRADEVFAAE-------QKRGIPGRPVEFPGWYRVKEYFESLEGTEEARSLLHGSRVRNDLAMHRLLQPVEDLLSNSYSAVGILEQWEKSMKLFNRALKLPHFDWPSASKTLGRQNID-ERLRHEEARALHSAWDDPIIKDRLWLDLLLYNHAVSVHNRQVAEHGV 1005
            DCW+F H+ K+GG TV  +I   +++   S  L+ +  W   +   +   +      T+G YTE LR +  +DCKWFT+FRHP+SR+VSAYFYC++   D+LCA+ ++ A  +DL TFAEHWGNY LRQF+LA ++A++VF  E       Q RG     V  P WYR K Y       +           + +  + + L   ++ LS  Y+AVGI+E+W+ SM+LFNR L L  FDW    +  G++N    +       AL +AW  P +K  +WLD+LLY+HA+SVH  QVA+ G+
Sbjct:   51 DCWVFSHMNKSGGMTVRKMIMPFLTEKGVSTALFDDIEWSSGRSYAETFVKENA-VFTYGGYTEGLRMYDDRDCKWFTVFRHPVSRVVSAYFYCQRAHHDQLCAAVVLDASKVDLLTFAEHWGNYGLRQFALASIKAEDVFHNEVVSEFCQQARG--HGDVCIPAWYRQKHYLHLPHQDDFC------GPTQPESGLAQFLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLRRFDWVKEFQKSGKKNSGGSQFETASKSALKAAWHSPELKKFIWLDILLYDHALSVHRSQVADLGI 341          
BLAST of mRNA_H-canaliculatus_F_contig11242.1120.1 vs. uniprot
Match: A0A6H5JNJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNJ0_9PHAE)

HSP 1 Score: 221 bits (564), Expect = 1.030e-66
Identity = 117/302 (38.74%), Postives = 176/302 (58.28%), Query Frame = 1
Query:  112 LSSTPKDCWIFIHLVKAGGSTVNSLIHSSMSKMQSSVGLYTNHHWMREKDKPDKGAETRKHAMTFGAYTEALRSHRGQDCKWFTMFRHPISRLVSAYFYCKQRGRDELCASTIVKADNIDLHTFAEHWGNYALRQFSLAFVRADEVFAAEQKRGIPGRPVEFPGWYRVKEYFESLEGTEEARSLLHGSRVRND---LAMHRLLQPVEDLLSNSYSAVGILEQWEKSMKLFNRALKLPHFDWPSASKTLGRQNIDERLRHEEARALHSAWDDPIIKDRLWLDLLLYNHAVSVHNRQVAEHGVS 1008
            LS +   CW+F H  KAGG+TV + + +       +V L  +  W    DK  +     K  +  G Y E LR+   Q CKWFTM RHPI+RL+SA++YC    RD+LCA+ I K ++ D++ FA+HWGNYAL QF+L  V   E+FA E         V+ P W++ K YFE   G     S        ++   + +  +LQPVE+LL ++Y+AVGILE W++SM LF+ AL++P F+W  AS +L  +    ++  ++A  L +A  DP+++  +WLDLLLY +A S+H  Q+  + ++
Sbjct:   30 LSLSTPTCWVFTHNNKAGGTTVKTHLRNYAESRNETVAL-CHSDWYARGDKGIQDLLNDKPVLIAGGYAEGLRTSAFQGCKWFTMMRHPIARLISAFYYCSGGNRDQLCAANIHKPEDGDIYDFAKHWGNYALLQFALGVVDQHEIFAEE---------VDAPAWFKAKLYFEGRLGYPGNMSTATNRTTHDEWQSVWIPDILQPVEELLRSNYAAVGILEHWQRSMMLFDHALEIPGFNWTVASASLSPRKSQNKIVEKKAM-LAAAMTDPVLRQYVWLDLLLYEYACSLHEEQLRRYDLA 320          
BLAST of mRNA_H-canaliculatus_F_contig11242.1120.1 vs. uniprot
Match: A0A6H5JQY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQY7_9PHAE)

HSP 1 Score: 219 bits (557), Expect = 1.090e-65
Identity = 121/307 (39.41%), Postives = 185/307 (60.26%), Query Frame = 1
Query:  112 LSSTPKDCWIFIHLVKAGGSTVNSLIHSSMSKMQSSVGLYTNHHWMREKDKPDKGAET---RKHAMTFGAYTEALRSHRGQ-DCKWFTMFRHPISRLVSAYFYCKQRGRDELCASTIVKADNIDLHTFAEHWGNYALRQFSLAFVRADEVFAAEQKRGIPGRPVEFPGWYRVKEYFESLEGTEEARSL---LHGSRVRNDLAMHRLLQPVEDLLSNSYSAVGILEQWEKSMKLFNRALKLPHFDWPSASKTLGRQNI-DERLRHEEARALHSAWDDPIIKDRLWLDLLLYNHAVSVHNRQVAEHGVS 1008
            LS +P  CW++  + KAGG+++  +I    +   ++VG +T+  +    +  D+G +    R+ ++ +GAYTE LR +     CKWFTM RHPI+RLVSA+ YC     D+LCA+ I K ++ D++ FAEHWGN+ + QF+LAF   +++   E K          P WY+ K YFE   G     S    +    V  ++ M  +LQPVE+LL + Y+AVGILEQWE SM LF+ AL+LP F+W S S +   +N+ D + +++    L ++  DP++K  LWLD+LLY HA SVH  Q++ +G++
Sbjct:   30 LSLSPPACWVYTDMNKAGGTSIRRMIKDYAAATNTTVGEFTHTQY----NAGDRGVQQILDRRPSLIWGAYTEGLRPYATVLGCKWFTMVRHPIARLVSAFNYCGIVPSDQLCATRIHKPEDGDIYDFAEHWGNHGVVQFALAFEDLNDILVTEVKS---------PPWYKAKLYFEGRLGPSGKTSTSANISTKDVCQNVWMPEILQPVEELLRSKYAAVGILEQWETSMMLFDHALQLPGFNWTSTSASSTPRNVHDSKAKND---LLVASMTDPVLKQILWLDILLYEHACSVHKAQLSRYGLA 320          
BLAST of mRNA_H-canaliculatus_F_contig11242.1120.1 vs. uniprot
Match: D7FWQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWQ3_ECTSI)

HSP 1 Score: 215 bits (547), Expect = 1.480e-62
Identity = 124/317 (39.12%), Postives = 178/317 (56.15%), Query Frame = 1
Query:  106 RALSSTPKDCWIFIHLVKAGGSTVNSLIHSSMSKMQSSVGLYTNHHWMREKDKPD----KGAETRKHAMTFGAYTEALRSHRGQD--CKWFTMFRHPISRLVSAYFYCKQRGRDELCASTIVKADNIDLHTFAEHWGNYALRQFSLAFVRAD---EVFAAEQKRGIPGRPVE-FPGWYRVKEYFESLE-------GTEEARSLLHGSRVRNDLAMHRLLQPVEDLLSNSYSAVGILEQWEKSMKLFNRALKLPHFDWPSASKTLGRQNIDERLRHEEARALHSAWDDPIIKDRLWLDLLLYNHAVSVHNRQVAEHGV 1005
            RAL+S P  CW+F+HL K GGSTV  ++  S     S   +Y ++ W    D       K A      +  G YTEALR     D  C++FT+FRHPI+R+VSAYFYC+    D  CAS +V A ++DL TFA+HWGN+A+RQF+L FV +D   E     + + +    ++   GWY++K Y E  E       G  EA ++ H +    +  ++ LLQP  DL+ + Y AVGILEQW  ++ LF+ AL++P   W +     G+Q +D + +  E+  L  AW D  +K  + LDLLLY HAV V + Q   +G+
Sbjct:  148 RALAS-PDQCWVFMHLQKCGGSTVKYMLRRSYGSRYS---IYDSNQWKLGDDISANFGVKLARGETWNVMAGGYTEALRRSEPVDAGCRFFTLFRHPIARMVSAYFYCRSTLGDAACASEVVDAKDVDLLTFAKHWGNFAVRQFALGFVPSDGVQEYIRTPEAQALHDFDLKKIAGWYQLKMYLERPEKGDWGVPGQSEAMTVEHDAAATLEAPLYDLLQPAMDLIRSGYVAVGILEQWNTTLHLFDHALEIPGMYWGAQFAEGGKQRVDYKNKRLESETLKQAWTDSELKKYMRLDLLLYEHAVDVFHEQARGYGL 460          
BLAST of mRNA_H-canaliculatus_F_contig11242.1120.1 vs. uniprot
Match: D7G715_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G715_ECTSI)

HSP 1 Score: 203 bits (516), Expect = 1.220e-58
Identity = 119/310 (38.39%), Postives = 165/310 (53.23%), Query Frame = 1
Query:  133 CWIFIHLVKAGGSTVNSLIHSSMSKMQSSVGLYTNHHWMREKDKPDKGAETRKH----AMTFGAYTEALR-------SHRGQDCKWFTMFRHPISRLVSAYFYCKQRGRDELCASTIVKADNIDLHTFAEHWGNYALRQFSLAFVRADEV--FAAEQK----RGIPGRPVEF-PGWYRVKEYFESLEGTEEARSLLHGSRVRNDLAMHRLLQPVEDLLSNSYSAVGILEQWEKSMKLFNRALKLPHFDWPSASKTLGRQNIDERLRHEEARALHSAWDDPIIKDRLWLDLLLYNHAVSVHNRQVAEHGVS 1008
            CWIF HL KAGG+TV  L+  S     S    Y ++ W + +   +  A +       +   G Y EALR             C+WFT+FRHP+SRLVSAY+YC++   D+LCAS  V + N+DL TFA HWGN+ALRQF+L FV  D+V  F          G+    VE  PGWY +K +     G  +  S   G+R+        + +PV DLL ++Y+ VGILE W  ++ LF+ AL +P   W    +  G+ N+D R + E+   L  A  DP I   L LDL LY  AV + N+Q   +G++
Sbjct:   88 CWIFNHLQKAGGTTVKRLLFDSWG---SESTTYDSYQWKKGQGYAESVAASLASPAGWSAAAGGYLEALRRTPAFQPDDERTPCRWFTVFRHPVSRLVSAYYYCREDPSDQLCASEFVSSRNVDLVTFARHWGNFALRQFALGFVSHDKVKDFLVSPNGGGAMGLTAEQVELMPGWYMLKLFLNDRSGVADDTSP-EGTRLEY------MFRPVVDLLRDNYAVVGILEDWNATLSLFDSALDMPGMTWREEFERSGKLNVDTRFKGEKQDVLQQALSDPEIVKHLSLDLRLYGQAVDIFNQQRHSYGIA 387          
BLAST of mRNA_H-canaliculatus_F_contig11242.1120.1 vs. uniprot
Match: D7G716_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G716_ECTSI)

HSP 1 Score: 204 bits (520), Expect = 1.450e-58
Identity = 117/300 (39.00%), Postives = 167/300 (55.67%), Query Frame = 1
Query:  124 PKDCWIFIHLVKAGGSTVNSLIHSSMSKMQSSVGLYTNHHWMREKDKPDK-GAETR---KHAMTFGAYTEALRSHR--GQDCKWFTMFRHPISRLVSAYFYCKQRGRDELCASTIVKADNIDLHTFAEHWGNYALRQFSLAFVRADEVFAAEQKRGIPGRPVEFPGWYRVKEYFESLEGTEEARSLLHGSRVRNDLAMHRLLQPVEDLLSNSYSAVGILEQWEKSMKLFNRALKLPHFDWPSASKTLGRQNIDERLRHEEARALHSAWDDPIIKDRLWLDLLLYNHAVSVHNRQVAEHGV 1005
            P  CW+F+HL K GGSTV  L+     +  S   +Y +  W    +   K GA+     K  +  G YTEALR     G  C++FT+FRHPI+R+VSAYFYC+    D  CAS +++A ++DL TFA+HWGN+ALRQF+L FV +D+V   + K  +  RP +  G          + G  EA +    +    D  ++ LLQP  DL+ + Y AVGILEQW  +++LF+  L +P  +W       G+ ++D   +  E   L  AW D  +K  + LDLLLY HAV V ++Q   HG+
Sbjct:  174 PGQCWVFMHLQKCGGSTVKDLLED---RWGSRFFIYDSMRWKFGDEFSAKFGAKLALGDKWNVMTGGYTEALRLSEPVGAGCRFFTLFRHPIARMVSAYFYCRSVSGDVACASEVMQAKDVDLLTFAKHWGNFALRQFALGFVPSDDVQEYQLKMYLE-RPQKEDG---------GVLGQREAMTAHQDAAATPDAPLYELLQPAMDLVRDGYVAVGILEQWNTTLRLFDHTLDMPVMNWEEQFAESGKHHVDIVNKQLEIETLQQAWTDSELKKYMRLDLLLYEHAVDVFHQQARSHGL 460          
BLAST of mRNA_H-canaliculatus_F_contig11242.1120.1 vs. uniprot
Match: A0A6H5JQM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM0_9PHAE)

HSP 1 Score: 157 bits (396), Expect = 6.630e-40
Identity = 104/299 (34.78%), Postives = 156/299 (52.17%), Query Frame = 1
Query:  133 CWIFIHLVKAGGSTVNSLIHSSMSKMQSSVGLYTNHHWMR-EKDKPDKGAETRKHAMTFGAYTEALRSHRGQDCKWFTMFRHPISRLVSAYFYCKQRGRDELCASTIVKADNIDLHTFAEHWGNYALRQFSLAFVRADEVFA-AEQKRGIPGRPVEFPGWYRVKEYFESLEGTEEARSLLHGSRVRNDLAMHRLLQPVEDLLSNSYSAVGILEQWEKSMKLFNRALKLPHFDWPSASKTLGRQNIDERLRHE------EARALHSAWDDPIIKDRLWLDLLLYNHAVSVHNRQVAEHGV 1005
            CWIF+H+ K+G S    +      K +    ++    W R +    D  A   K  +  G   E+LR+H+ + CKW T+FRHPI+RL+SAY +C +  +D +C  T    ++  L  FAE WGN+A+RQF+L  V    V   A Q++   G  +    WY VKEY            L  G  +  D  +  +L+PV+ LLS  Y+AVGI ++ E +M LF++AL +   DW S+  TLG   I+E ++ +      E+     A ++P I   L LD+ LY HA+ V   QVA+ G+
Sbjct:  273 CWIFMHMDKSGASGARRVATERWRKDEL---VFDTVQWRRGDGFAADVMASHWK--LLHGGCVESLRNHKERSCKWLTIFRHPIARLLSAYHHCLEAPKDPVCPPT----ESTGLVVFAELWGNFAMRQFALESVSPSAVKEWAAQRQARTGTSM----WYLVKEY------------LARGG-IAEDEVLESMLEPVKGLLSTQYAAVGIAQELETTMVLFSKALSMEGLDWSSSWATLG---INEEVKQDSEYDIAESEPFRQALENPRIVSALRLDMSLYEHAMHVFKDQVAQFGI 542          
BLAST of mRNA_H-canaliculatus_F_contig11242.1120.1 vs. uniprot
Match: D8LU75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU75_ECTSI)

HSP 1 Score: 150 bits (378), Expect = 1.060e-39
Identity = 91/240 (37.92%), Postives = 131/240 (54.58%), Query Frame = 1
Query:  298 MTFGAYTEALRSHRGQDCKWFTMFRHPISRLVSAYFYCKQRGRDELCASTIVKADNIDLHTFAEHWGNYALRQFSLAFVRADEVFA-AEQKRGIPGRPVEFPGWYRVKEYFESLEGTEEARSLLHGSRVRNDLAMHRLLQPVEDLLSNSYSAVGILEQWEKSMKLFNRALKLPHFDWPSASKTLGRQNIDERLRH---EEARALHSAWDDPIIKDRLWLDLLLYNHAVSVHNRQVAEHGV 1005
            +  G   E+LR+H+G+ CKW T+FRHPI+RL+SAY +C    +D +C  T    ++  L  FAE WGN+A+RQF+LA V    V   A Q++   G  +    WY VKEY            L  G  +  D  +   L+PV+ LLS  Y+AVGI ++ + +M LF++AL +   DW S+  TLG    D++       E+     A ++P I   L LD+ LY HAV V   QVA+ G+
Sbjct:   46 LLHGGCVESLRNHKGRSCKWITIFRHPIARLLSAYDHCLGAPKDPVCPPT----ESTGLAAFAELWGNFAMRQFALAAVSPSAVKEWAAQRQARTGTSM----WYLVKEY------------LARGG-IAEDEVLGSKLEPVKGLLSTQYAAVGIAQELKTTMVLFSKALSMEGLDWSSSWATLGINEEDKQDSEYDITESEPFRQALENPRIVSALRLDMSLYEHAVHVFKDQVAQFGI 264          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11242.1120.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L061_9PHAE1.750e-10367.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FS84_ECTSI2.290e-7544.19Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JY77_9PHAE1.040e-7140.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JNJ0_9PHAE1.030e-6638.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQY7_9PHAE1.090e-6539.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWQ3_ECTSI1.480e-6239.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G715_ECTSI1.220e-5838.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G716_ECTSI1.450e-5839.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JQM0_9PHAE6.630e-4034.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LU75_ECTSI1.060e-3937.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig11242contigH-canaliculatus_F_contig11242:568..2016 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score221.1
Seed ortholog evalue7.9e-55
Seed eggNOG ortholog2880.D7FWQ3
EggNOG free text desc.Sulfotransferase family
EggNOG OGs2CYGC@1,2S47N@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons2
Model size1011
Cds size1011
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928805.5142605-CDS-H-canaliculatus_F_contig11242:567..12041622928805.5142605-CDS-H-canaliculatus_F_contig11242:567..1204Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11242 568..1204 -
1696845571.7915056-CDS-H-canaliculatus_F_contig11242:567..12041696845571.7915056-CDS-H-canaliculatus_F_contig11242:567..1204Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11242 568..1204 -
1622928805.527332-CDS-H-canaliculatus_F_contig11242:1642..20161622928805.527332-CDS-H-canaliculatus_F_contig11242:1642..2016Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11242 1643..2016 -
1696845571.803852-CDS-H-canaliculatus_F_contig11242:1642..20161696845571.803852-CDS-H-canaliculatus_F_contig11242:1642..2016Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11242 1643..2016 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig11242.1120.1prot_H-canaliculatus_F_contig11242.1120.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig11242 568..2016 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig11242.1120.1

>prot_H-canaliculatus_F_contig11242.1120.1 ID=prot_H-canaliculatus_F_contig11242.1120.1|Name=mRNA_H-canaliculatus_F_contig11242.1120.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=337bp
LGLFIATGPLESSGYCTSCNRNTTFASDSATNRTTRALSSTPKDCWIFIH
LVKAGGSTVNSLIHSSMSKMQSSVGLYTNHHWMREKDKPDKGAETRKHAM
TFGAYTEALRSHRGQDCKWFTMFRHPISRLVSAYFYCKQRGRDELCASTI
VKADNIDLHTFAEHWGNYALRQFSLAFVRADEVFAAEQKRGIPGRPVEFP
GWYRVKEYFESLEGTEEARSLLHGSRVRNDLAMHRLLQPVEDLLSNSYSA
VGILEQWEKSMKLFNRALKLPHFDWPSASKTLGRQNIDERLRHEEARALH
SAWDDPIIKDRLWLDLLLYNHAVSVHNRQVAEHGVS*
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mRNA from alignment at H-canaliculatus_F_contig11242:568..2016-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig11242.1120.1 ID=mRNA_H-canaliculatus_F_contig11242.1120.1|Name=mRNA_H-canaliculatus_F_contig11242.1120.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1449bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11242:568..2016- (Hapterophycus canaliculatus Oshoro5f female)
CTGGGGCTTTTCATCGCGACTGGTCCACTCGAGTCTAGCGGCTACTGCAC AAGCTGCAATCGCAATACCACCTTTGCGAGCGACTCAGCTACTAATAGGA CCACTCGAGCACTCTCTTCGACTCCAAAGGATTGCTGGATATTCATCCAT CTTGTGAAGGCAGGAGGTTCGACGGTCAACAGCCTGATCCACTCGTCGAT GAGCAAGATGCAGTCCTCTGTGGGGTTGTACACAAATCACCACTGGATGA GAGAGAAAGACAAGCCTGACAAGGGCGCCGAAACGAGGAAACACGCCATG ACGTTTGGCGCATACACGGAAGCACTTCGATCTCACCGAGGTCAGGACTG CAAGTGGTTCACCATGTTTCGGCAGTAAGTGGATGGTTTCCATCATGAGC GCATCGCCTACAGGCTTTTCATCCTACTTGCCGCCCCCCCTCTTTGCCCC CTTCAAGGCGGTTCTTATACAGAAAGTGTCGACCATATGGATTCTTGTTG ATCGGATACGTCACATGCCAGCAACGCATCGGGTGGCATGATTTCGATCG GTGTACCGCTGCTCGTTTCTGTGCTCTATTTGCAGAGGGTCGTACTGCGT CGACACCCCATCCTCCAGAAAACACACTCGAAGTACTTTTATACTGCACT GGTACTTCATGAGAAGACGCAGAACGACTGTTAATAATTGGCTGACATTG CATGATAGTTCCTATCTGCGTCTCGTTTGTTGGTCAGGACGTCTTTTTTC GAGCCTTTAGTCAACCCTCTCGCGTGCACCTCTCCCTGAACGCCACGAAT ATTTGTGTTCAGCCCGATTTCGCGGCTGGTGAGCGCCTACTTCTACTGTA AGCAACGCGGGCGGGATGAGCTTTGCGCGAGTACGATCGTCAAGGCGGAC AACATCGATTTGCACACTTTCGCTGAGCACTGGGGCAACTACGCCTTGCG ACAATTCTCCCTAGCGTTTGTCAGGGCGGATGAGGTGTTTGCCGCCGAGC AAAAACGAGGAATACCTGGGCGTCCAGTTGAGTTTCCAGGCTGGTATAGG GTGAAGGAGTACTTTGAAAGTCTGGAAGGAACGGAAGAAGCGAGATCTCT TCTCCACGGGTCCAGAGTGCGAAACGACCTCGCTATGCATCGTCTTCTCC AACCCGTCGAGGACTTGCTGAGCAACAGCTATTCCGCAGTGGGCATACTG GAGCAATGGGAGAAAAGCATGAAATTGTTCAATAGGGCCCTCAAGCTGCC CCACTTTGACTGGCCGAGTGCATCTAAAACTCTGGGACGACAGAATATCG ATGAGAGACTCCGCCACGAGGAAGCCCGGGCACTGCATTCTGCATGGGAC GATCCAATTATAAAGGACCGTTTGTGGCTGGATTTGCTTCTGTACAACCA CGCCGTAAGCGTCCACAACCGGCAGGTTGCGGAACATGGAGTCAGTTAG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11242:568..2016-

>mRNA_H-canaliculatus_F_contig11242.1120.1 ID=mRNA_H-canaliculatus_F_contig11242.1120.1|Name=mRNA_H-canaliculatus_F_contig11242.1120.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2022bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11242:568..2016- (Hapterophycus canaliculatus Oshoro5f female)
CTGGGGCTTTTCATCGCGACTGGTCCACTCGAGTCTAGCGGCTACTGCAC
AAGCTGCAATCGCAATACCACCTTTGCGAGCGACTCAGCTACTAATAGGA
CCACTCGAGCACTCTCTTCGACTCCAAAGGATTGCTGGATATTCATCCAT
CTTGTGAAGGCAGGAGGTTCGACGGTCAACAGCCTGATCCACTCGTCGAT
GAGCAAGATGCAGTCCTCTGTGGGGTTGTACACAAATCACCACTGGATGA
GAGAGAAAGACAAGCCTGACAAGGGCGCCGAAACGAGGAAACACGCCATG
ACGTTTGGCGCATACACGGAAGCACTTCGATCTCACCGAGGTCAGGACTG
CAAGTGGTTCACCATGTTTCGGCACTGGGGCTTTTCATCGCGACTGGTCC
ACTCGAGTCTAGCGGCTACTGCACAAGCTGCAATCGCAATACCACCTTTG
CGAGCGACTCAGCTACTAATAGGACCACTCGAGCACTCTCTTCGACTCCA
AAGGATTGCTGGATATTCATCCATCTTGTGAAGGCAGGAGGTTCGACGGT
CAACAGCCTGATCCACTCGTCGATGAGCAAGATGCAGTCCTCTGTGGGGT
TGTACACAAATCACCACTGGATGAGAGAGAAAGACAAGCCTGACAAGGGC
GCCGAAACGAGGAAACACGCCATGACGTTTGGCGCATACACGGAAGCACT
TCGATCTCACCGAGGTCAGGACTGCAAGTGGTTCACCATGTTTCGGCACC
CGATTTCGCGGCTGGTGAGCGCCTACTTCTACTGTAAGCAACGCGGGCGG
GATGAGCTTTGCGCGAGTACGATCGTCAAGGCGGACAACATCGATTTGCA
CACTTTCGCTGAGCACTGGGGCAACTACGCCTTGCGACAATTCTCCCTAG
CGTTTGTCAGGGCGGATGAGGTGTTTGCCGCCGAGCAAAAACGAGGAATA
CCTGGGCGTCCAGTTGAGTTTCCAGGCTGGTATAGGGTGAAGGAGTACTT
TGAAAGTCTGGAAGGAACGGAAGAAGCGAGATCTCTTCTCCACGGGTCCA
GAGTGCGAAACGACCTCGCTATGCATCGTCTTCTCCAACCCGTCGAGGAC
TTGCTGAGCAACAGCTATTCCGCAGTGGGCATACTGGAGCAATGGGAGAA
AAGCATGAAATTGTTCAATAGGGCCCTCAAGCTGCCCCACTTTGACTGGC
CGAGTGCATCTAAAACTCTGGGACGACAGAATATCGATGAGAGACTCCGC
CACGAGGAAGCCCGGGCACTGCATTCTGCATGGGACGATCCAATTATAAA
GGACCGTTTGTGGCTGGATTTGCTTCTGTACAACCACGCCGTAAGCGTCC
ACAACCGGCAGGTTGCGGAACATGGAGTCAGTTAGCCCGATTTCGCGGCT
GGTGAGCGCCTACTTCTACTGTAAGCAACGCGGGCGGGATGAGCTTTGCG
CGAGTACGATCGTCAAGGCGGACAACATCGATTTGCACACTTTCGCTGAG
CACTGGGGCAACTACGCCTTGCGACAATTCTCCCTAGCGTTTGTCAGGGC
GGATGAGGTGTTTGCCGCCGAGCAAAAACGAGGAATACCTGGGCGTCCAG
TTGAGTTTCCAGGCTGGTATAGGGTGAAGGAGTACTTTGAAAGTCTGGAA
GGAACGGAAGAAGCGAGATCTCTTCTCCACGGGTCCAGAGTGCGAAACGA
CCTCGCTATGCATCGTCTTCTCCAACCCGTCGAGGACTTGCTGAGCAACA
GCTATTCCGCAGTGGGCATACTGGAGCAATGGGAGAAAAGCATGAAATTG
TTCAATAGGGCCCTCAAGCTGCCCCACTTTGACTGGCCGAGTGCATCTAA
AACTCTGGGACGACAGAATATCGATGAGAGACTCCGCCACGAGGAAGCCC
GGGCACTGCATTCTGCATGGGACGATCCAATTATAAAGGACCGTTTGTGG
CTGGATTTGCTTCTGTACAACCACGCCGTAAGCGTCCACAACCGGCAGGT
TGCGGAACATGGAGTCAGTTAG
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