mRNA_H-canaliculatus_F_contig1106.965.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1106.965.1 vs. uniprot
Match: A0A6H5JTK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTK9_9PHAE) HSP 1 Score: 160 bits (406), Expect = 1.650e-44 Identity = 81/113 (71.68%), Postives = 87/113 (76.99%), Query Frame = 1 Query: 1 WDPSLMFVLGFGVMASLVGFPL------------------DREGATSAPLADKFEIPTSTELDIPLVLGGWLFGIGWGVGGLCPGPAVVAATFGLPGPALFFMPSLVVGMKVS 285 WDPSLMFVLGFGVM LVGFPL ++ AT APLA+KFEIPT TELD+PLVLGGWLFGIGWG+GGLCPGPAVVAATFGLPGPAL FMPSLVVGMK + Sbjct: 178 WDPSLMFVLGFGVMVGLVGFPLVTRNLGAPLCRLPAKAEEEQSLATGAPLAEKFEIPTGTELDVPLVLGGWLFGIGWGMGGLCPGPAVVAATFGLPGPALAFMPSLVVGMKAA 290
BLAST of mRNA_H-canaliculatus_F_contig1106.965.1 vs. uniprot
Match: A0A6H5JNH2_9PHAE (Sulf_transp domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JNH2_9PHAE) HSP 1 Score: 157 bits (396), Expect = 1.940e-42 Identity = 84/131 (64.12%), Postives = 91/131 (69.47%), Query Frame = 1 Query: 1 WDPSLMFVLGFGVMASLVGFPL------------------DREGATSAPLADKFEIPTSTELDIPLVLGGWLFGIGWGVGGLCPGPAVVAATFGLPGPALFFMPSLVVGMKVSLRPMWRVDYLSCVCSMPH 339 WDPSLMFVLG GVM LVGFPL ++ AT APLA+KFEIPT TELD+PLVLGGWLFGIGWG+GGLCPGPAVVAATFGLPGP L FMPSLVVGMK + R L S+PH Sbjct: 224 WDPSLMFVLGVGVMVGLVGFPLVTRSLGAPLCRLPAKAEEEQSLATGAPLAEKFEIPTGTELDVPLVLGGWLFGIGWGMGGLCPGPAVVAATFGLPGPFLAFMPSLVVGMKAAGR-------LKGALSLPH 347
BLAST of mRNA_H-canaliculatus_F_contig1106.965.1 vs. uniprot
Match: UPI001E2C030F (YeeE/YedE family protein n=1 Tax=Rhizobium sp. CECT 9324 TaxID=2845820 RepID=UPI001E2C030F) HSP 1 Score: 97.8 bits (242), Expect = 4.820e-22 Identity = 50/97 (51.55%), Postives = 66/97 (68.04%), Query Frame = 1 Query: 1 WDPSLMFVLGFGVMASLVGFPLDREGATSAPLADKFEIPTSTELDIPLVLGGWLFGIGWGVGGLCPGPAVVAATFGLPGPALFFMPSLVVGMKVSLR 291 WDPSLMFVLG VM ++ G + + A LADKF +PT E+D PL+LG +FGIGWG+GGLCPGPAV A + G G L F+ ++++GM + R Sbjct: 43 WDPSLMFVLGGAVMVAMTGMLIVKIMARPV-LADKFNLPTKAEIDRPLILGSAIFGIGWGLGGLCPGPAVAALSMGY-GATLLFVVTMLMGMVIHDR 137
BLAST of mRNA_H-canaliculatus_F_contig1106.965.1 vs. uniprot
Match: A0A2U8VQ48_9HYPH (Uncharacterized protein n=3 Tax=Methylobacteriaceae TaxID=119045 RepID=A0A2U8VQ48_9HYPH) HSP 1 Score: 95.5 bits (236), Expect = 4.240e-21 Identity = 50/92 (54.35%), Postives = 63/92 (68.48%), Query Frame = 1 Query: 1 WDPSLMFVLGFGVMASLVGFPLDREGATSAPLADKFEIPTSTELDIPLVLGGWLFGIGWGVGGLCPGPAVVAATFGLPGPALFFMPSLVVGM 276 WDPSL+FVLG V S +G+ L R A A LA F++PTS +D+PLVLG LFGIGWG+ G CPGPAV A + G P L F+ +++VGM Sbjct: 42 WDPSLVFVLGGAVSVSALGYALSRRLARPA-LARTFDLPTSRRIDLPLVLGAALFGIGWGLSGFCPGPAVAALSTGA-APVLVFVAAMLVGM 131
BLAST of mRNA_H-canaliculatus_F_contig1106.965.1 vs. uniprot
Match: A0A4S4A213_9HYPH (YeeE/YedE family protein n=1 Tax=Allorhizobium terrae TaxID=1848972 RepID=A0A4S4A213_9HYPH) HSP 1 Score: 95.1 bits (235), Expect = 5.080e-21 Identity = 51/97 (52.58%), Postives = 63/97 (64.95%), Query Frame = 1 Query: 1 WDPSLMFVLGFGVMASLVGFPLDREGATSAPLADKFEIPTSTELDIPLVLGGWLFGIGWGVGGLCPGPAVVAATFGLPGPALFFMPSLVVGMKVSLR 291 WDPSLMFVLG V+ + G R+ A LA+ F +PT T +D PLVLG +FGIGWG+GG CPGPA+ AA G G L F+ ++VVGM V R Sbjct: 43 WDPSLMFVLGGAVVVAFAGMVGVRKMAKPV-LAEDFNMPTKTRIDTPLVLGSAIFGIGWGLGGFCPGPAIAAAPMGY-GTVLLFIVAMVVGMLVHDR 137
BLAST of mRNA_H-canaliculatus_F_contig1106.965.1 vs. uniprot
Match: A0A353G3M2_RHISP (Uncharacterized protein n=1 Tax=Rhizobium sp. TaxID=391 RepID=A0A353G3M2_RHISP) HSP 1 Score: 93.6 bits (231), Expect = 2.030e-20 Identity = 49/97 (50.52%), Postives = 63/97 (64.95%), Query Frame = 1 Query: 1 WDPSLMFVLGFGVMASLVGFPLDREGATSAPLADKFEIPTSTELDIPLVLGGWLFGIGWGVGGLCPGPAVVAATFGLPGPALFFMPSLVVGMKVSLR 291 WDPSLMFVLG V+ + G L ++ A LAD+F +PT +D PLVLG +FGIGWG+GG CPGPA+ + G G L F+ ++VVGM V R Sbjct: 43 WDPSLMFVLGGAVVVATAGMALVKKMAKPV-LADQFYMPTKVRIDAPLVLGSAIFGIGWGLGGFCPGPAIASLPMGY-GAVLLFVVAMVVGMLVHDR 137
BLAST of mRNA_H-canaliculatus_F_contig1106.965.1 vs. uniprot
Match: A0A1Q8ZN13_9HYPH (Uncharacterized protein n=2 Tax=Rhizobium oryziradicis TaxID=1867956 RepID=A0A1Q8ZN13_9HYPH) HSP 1 Score: 92.8 bits (229), Expect = 3.900e-20 Identity = 48/92 (52.17%), Postives = 60/92 (65.22%), Query Frame = 1 Query: 1 WDPSLMFVLGFGVMASLVGFPLDREGATSAPLADKFEIPTSTELDIPLVLGGWLFGIGWGVGGLCPGPAVVAATFGLPGPALFFMPSLVVGM 276 WDPSLMFVLG V+ + G R+ T LAD F +PT T +D+PLVLG +FGIGWG+GG CPGPA+ A G G F+ ++VVGM Sbjct: 43 WDPSLMFVLGGAVVVAFAGMVWVRK-MTKPVLADTFNMPTKTRIDMPLVLGSAIFGIGWGLGGFCPGPAIAAMPMGY-GVVAVFIVAMVVGM 132
BLAST of mRNA_H-canaliculatus_F_contig1106.965.1 vs. uniprot
Match: A0A523A2T8_9BURK (YeeE/YedE family protein n=1 Tax=Burkholderiaceae bacterium TaxID=2030806 RepID=A0A523A2T8_9BURK) HSP 1 Score: 92.4 bits (228), Expect = 6.080e-20 Identity = 47/97 (48.45%), Postives = 62/97 (63.92%), Query Frame = 1 Query: 1 WDPSLMFVLGFGVMASLVGFPLDREGATSAPLADKFEIPTSTELDIPLVLGGWLFGIGWGVGGLCPGPAVVAATFGLPGPALFFMPSLVVGMKVSLR 291 WDPSL+FV+G V+ SLV F + LA+ F +PT ++D PL+LG LFG+GWG+GG CPGPA+ + G P AL F+ SL VGM + R Sbjct: 49 WDPSLVFVMGGAVLVSLVAFAVTPRPGRKPWLAESFMLPTRRDVDAPLLLGAALFGVGWGLGGYCPGPALASMLTGGPD-ALIFVASLAVGMWAARR 144
BLAST of mRNA_H-canaliculatus_F_contig1106.965.1 vs. uniprot
Match: B9JUY0_AGRVS (Uncharacterized protein n=22 Tax=Agrobacterium vitis TaxID=373 RepID=B9JUY0_AGRVS) HSP 1 Score: 92.0 bits (227), Expect = 7.890e-20 Identity = 48/97 (49.48%), Postives = 64/97 (65.98%), Query Frame = 1 Query: 1 WDPSLMFVLGFGVMASLVGFPLDREGATSAPLADKFEIPTSTELDIPLVLGGWLFGIGWGVGGLCPGPAVVAATFGLPGPALFFMPSLVVGMKVSLR 291 WD SL+FVLG V+ + G L R A LAD+F +PT+T +D+PLV G +FGIGWG+GG CPGPA+ A G G +L F+ ++V+GM V R Sbjct: 43 WDLSLIFVLGGAVVTAFAGMVLVRRMARPV-LADRFAMPTATHIDLPLVAGSAIFGIGWGLGGFCPGPALAALPLGY-GESLIFVAAMVIGMVVHDR 137
BLAST of mRNA_H-canaliculatus_F_contig1106.965.1 vs. uniprot
Match: A0A2K8YRA3_9BRAD (Uncharacterized protein n=1 Tax=Bradyrhizobium sp. SK17 TaxID=2057741 RepID=A0A2K8YRA3_9BRAD) HSP 1 Score: 92.0 bits (227), Expect = 8.760e-20 Identity = 44/94 (46.81%), Postives = 62/94 (65.96%), Query Frame = 1 Query: 1 WDPSLMFVLGFGVMASLVGFPLDREGATSAPLADKFEIPTSTELDIPLVLGGWLFGIGWGVGGLCPGPAVVAATFGLPGPALFFMPSLVVGMKV 282 WDPSL FVLG V S +G+ + R G T L F +PT T +D PL++G LFGIGWG+ GLCPGPA+ + +FG+P +F + +++ G+ V Sbjct: 42 WDPSLAFVLGGAVAVSSIGYVMSR-GMTEPALDIAFRLPTKTAIDSPLLIGAGLFGIGWGISGLCPGPAIASLSFGIPATIVFTI-AMIAGVLV 133 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1106.965.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1106.965.1 >prot_H-canaliculatus_F_contig1106.965.1 ID=prot_H-canaliculatus_F_contig1106.965.1|Name=mRNA_H-canaliculatus_F_contig1106.965.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=137bp MFVLGFGVMASLVGFPLDREGATSAPLADKFEIPTSTELDIPLVLGGWLFback to top mRNA from alignment at H-canaliculatus_F_contig1106:631..2079+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1106.965.1 ID=mRNA_H-canaliculatus_F_contig1106.965.1|Name=mRNA_H-canaliculatus_F_contig1106.965.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1449bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1106:631..2079+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1106:631..2079+ >mRNA_H-canaliculatus_F_contig1106.965.1 ID=mRNA_H-canaliculatus_F_contig1106.965.1|Name=mRNA_H-canaliculatus_F_contig1106.965.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=822bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1106:631..2079+ (Hapterophycus canaliculatus Oshoro5f female)back to top |