mRNA_H-canaliculatus_F_contig11036.949.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig11036.949.1 vs. uniprot
Match: A0A6H5JPM6_9PHAE (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JPM6_9PHAE) HSP 1 Score: 481 bits (1239), Expect = 7.270e-159 Identity = 245/254 (96.46%), Postives = 249/254 (98.03%), Query Frame = 1 Query: 1 RPDIMGRKAIFEVHLKGLNLDGKSSEFSGRLAGLTPGFVGADIENLCNEAAIVAARRDKKKIEMDDFESATDRVIGGLESNKLIMPEEKRIVAYHEAGHAVAGWNLEHADPLMKVTIVPRGSSTLGYAQYLPKEVFLRTREQITDIICMALAGRASEQVHFGDVTTGASDDLRRVTAMVYQMIGVYGMGDGIGQLAFPQENGGGGFPQERPYSDATAEKMDLEARKMVDSAYQRTLELVEAKKEQVRRTASVEL 762 +PDIMGRKAIFEVHLKGLNL GKSSEFSGRLAGLTPGFVGADIENLCNEAAIVAARRDKKKIEMDDFESATDRVIGGLESNKLIMPEEKRIVAYHEAGHAVAGWNLEHADPLMKVTIVPRGSSTLGYAQYLPKEVFLRTREQITDIICMALAGRASEQVHFGDVTTGASDDLRRVTAMVYQMIGVYGMGDGIGQLAFPQENGGGGFPQERPYSDATAEKMDLEARKMVDSAYQRTLELVEAKKEQ++ A + L Sbjct: 614 KPDIMGRKAIFEVHLKGLNLGGKSSEFSGRLAGLTPGFVGADIENLCNEAAIVAARRDKKKIEMDDFESATDRVIGGLESNKLIMPEEKRIVAYHEAGHAVAGWNLEHADPLMKVTIVPRGSSTLGYAQYLPKEVFLRTREQITDIICMALAGRASEQVHFGDVTTGASDDLRRVTAMVYQMIGVYGMGDGIGQLAFPQENGGGGFPQERPYSDATAEKMDLEARKMVDSAYQRTLELVEAKKEQIKLVAELLL 867
BLAST of mRNA_H-canaliculatus_F_contig11036.949.1 vs. uniprot
Match: A0A7S2WKY8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WKY8_9STRA) HSP 1 Score: 378 bits (971), Expect = 2.590e-121 Identity = 187/254 (73.62%), Postives = 219/254 (86.22%), Query Frame = 1 Query: 1 RPDIMGRKAIFEVHLKGLNLDGKSSEFSGRLAGLTPGFVGADIENLCNEAAIVAARRDKKKIEMDDFESATDRVIGGLESNKLIMPEEKRIVAYHEAGHAVAGWNLEHADPLMKVTIVPRGSSTLGYAQYLPKEVFLRTREQITDIICMALAGRASEQVHFGDVTTGASDDLRRVTAMVYQMIGVYGMGDGIGQLAFPQENGGGGFPQERPYSDATAEKMDLEARKMVDSAYQRTLELVEAKKEQVRRTASVEL 762 +PDI GRK IFEVHL+GL L G ++F+GRLAGLTPGF GADI N+CNEAAIVAARR K +I++ DFESATDRVIGGLE+ K+I PEEKRIVAYHEAGHAVAGW LEHADP++KVTIVPRGS LG+AQYLPKEV LRT EQI D+ICMALAGRASE+V+FG VTTGASDDLRRVT +VYQMI VYG IGQLAFPQ+ GGGGFP++RPYSDATA+ MD EA+K+VD+AYQRTL++V +KE++ + A + L Sbjct: 419 KPDIQGRKEIFEVHLRGLTLAGPVADFAGRLAGLTPGFAGADIANICNEAAIVAARRKKSQIDISDFESATDRVIGGLETGKIISPEEKRIVAYHEAGHAVAGWFLEHADPILKVTIVPRGSGALGFAQYLPKEVALRTEEQINDMICMALAGRASEEVNFGRVTTGASDDLRRVTQIVYQMIQVYGFNKRIGQLAFPQQEGGGGFPEQRPYSDATAQAMDEEAKKLVDTAYQRTLDIVRERKEEIEKMAELLL 672
BLAST of mRNA_H-canaliculatus_F_contig11036.949.1 vs. uniprot
Match: A0A835YSU3_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSU3_9STRA) HSP 1 Score: 376 bits (965), Expect = 1.020e-120 Identity = 195/270 (72.22%), Postives = 221/270 (81.85%), Query Frame = 1 Query: 4 PDIMGRKAIFEVHLKGLNLDGKSSEFSGRLAGLTPGFVGADIENLCNEAAIVAARRDKKKIEMDDFESATDRVIGGLESNKLIMPEEKRIVAYHEAGHAVAGWNLEHADPLMKVTIVPRGSSTLGYAQYLPKEVFLRTREQITDIICMALAGRASEQVHFGDVTTGASDDLRRVTAMVYQMIGVYGMGDGIGQLAFPQENGGGGFPQERPYSDATAEKMDLEARKMVDSAYQRTLELVEAKKEQVRRTASVELPPGFPSSASSLSFFLPR 813 PDI GRK IFEVHLKGL L+G+ S++SGRLAGLTPGF GADI+N+CNEAAIVAARR +K I+++ FE+ATDRVIGGLESNKLI PEEKRIVAYHEAGHAVAGWNLEHADPL+KVTIVPRG +LGYAQYLPKEVFLRT EQI DIICMALAGRASEQV+FG TTGASDDL+RVT +VYQMI VYGM +GQLAFP+E+ GG FP +RPYSD TAE MD EA+ MVD A+QRTL+LV K QV A + L + L+ PR Sbjct: 392 PDIKGRKQIFEVHLKGLKLEGQVSDYSGRLAGLTPGFSGADIQNICNEAAIVAARRGRKTIDLECFEAATDRVIGGLESNKLITPEEKRIVAYHEAGHAVAGWNLEHADPLLKVTIVPRGRGSLGYAQYLPKEVFLRTEEQINDIICMALAGRASEQVNFGTYTTGASDDLKRVTQIVYQMITVYGMSSKVGQLAFPKEDMGG-FPSDRPYSDHTAEVMDTEAKTMVDKAFQRTLDLVAKHKHQVEAIAELLLKKETINHDDMLAVLGPR 660
BLAST of mRNA_H-canaliculatus_F_contig11036.949.1 vs. uniprot
Match: A0A7S2FU06_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FU06_9STRA) HSP 1 Score: 358 bits (919), Expect = 3.220e-119 Identity = 180/252 (71.43%), Postives = 210/252 (83.33%), Query Frame = 1 Query: 7 DIMGRKAIFEVHLKGLNLDGKSSEFSGRLAGLTPGFVGADIENLCNEAAIVAARRDKKKIEMDDFESATDRVIGGLESNKLIMPEEKRIVAYHEAGHAVAGWNLEHADPLMKVTIVPRGSSTLGYAQYLPKEVFLRTREQITDIICMALAGRASEQVHFGDVTTGASDDLRRVTAMVYQMIGVYGMGDGIGQLAFPQENGGGGFPQERPYSDATAEKMDLEARKMVDSAYQRTLELVEAKKEQVRRTASVEL 762 DI GRK IFEVHLKGL LDG+++++S RLAGLTPGF GADI N+CNEAAI+AARR K KI++ DFE+A DRVIGGLESNK+I PEEK+ VA+HEAGHAVAGW LEHADP++KVTIVPRGS LGYAQYLP EV LRT QI D+ICMALAGRA+E+V+FG VTTGASDDLRRVT ++YQMI YG IGQLAFPQ GGG FP++RPYSDATA+ MD EA+KMVD AY+RTL+L+ KK +V A + L Sbjct: 1 DIQGRKEIFEVHLKGLTLDGETTDYSSRLAGLTPGFAGADIANICNEAAIIAARRSKDKIDIMDFEAAADRVIGGLESNKIISPEEKKTVAFHEAGHAVAGWYLEHADPILKVTIVPRGSGALGYAQYLPAEVALRTEAQINDMICMALAGRAAEEVNFGKVTTGASDDLRRVTGIIYQMIQQYGFNQRIGQLAFPQSEGGG-FPEQRPYSDATAQAMDEEAKKMVDVAYERTLQLMREKKPEVTAVAEMLL 251
BLAST of mRNA_H-canaliculatus_F_contig11036.949.1 vs. uniprot
Match: A0A835Z5J8_9STRA (Cell division protease ftsH n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5J8_9STRA) HSP 1 Score: 365 bits (938), Expect = 1.840e-115 Identity = 187/253 (73.91%), Postives = 210/253 (83.00%), Query Frame = 1 Query: 4 PDIMGRKAIFEVHLKGLNLDGKSSEFSGRLAGLTPGFVGADIENLCNEAAIVAARRDKKKIEMDDFESATDRVIGGLESNKLIMPEEKRIVAYHEAGHAVAGWNLEHADPLMKVTIVPRGSSTLGYAQYLPKEVFLRTREQITDIICMALAGRASEQVHFGDVTTGASDDLRRVTAMVYQMIGVYGMGDGIGQLAFPQENGGGGFPQERPYSDATAEKMDLEARKMVDSAYQRTLELVEAKKEQVRRTASVEL 762 PDI GRK IFEVHLKGL L+GK ++SGRLAGLTPGF GADI+N+CNEAAIVAAR+ + I + FE ATDRVIGGLES KLI PEEK+IVAYHEAGHAVAGWNLEHADPL+KVTIVPRG TLGYAQYLPKEVFLRTR QITDI+CMALAGRASEQV+FG TTGASDDLRRVT MVYQMI VYGM D +GQLAFP+E+GGG +P ++ YSD TA+ MD EA+ MVD AY RT+ L+ K QV A + L Sbjct: 510 PDIKGRKQIFEVHLKGLKLEGKVGDYSGRLAGLTPGFSGADIQNICNEAAIVAARKSRTSINLQCFEEATDRVIGGLESKKLITPEEKKIVAYHEAGHAVAGWNLEHADPLLKVTIVPRGRGTLGYAQYLPKEVFLRTRAQITDIMCMALAGRASEQVNFGTFTTGASDDLRRVTQMVYQMITVYGMSDKVGQLAFPKEDGGG-YPGDKQYSDHTAQVMDEEAKSMVDDAYTRTVSLMTEYKHQVEAVAELLL 761
BLAST of mRNA_H-canaliculatus_F_contig11036.949.1 vs. uniprot
Match: A0A7S3XWU5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWU5_HETAK) HSP 1 Score: 353 bits (906), Expect = 5.410e-113 Identity = 185/255 (72.55%), Postives = 206/255 (80.78%), Query Frame = 1 Query: 1 RPDIMGRKAIFEVHLKGLNLDGKSSEFSGRLAGLTPGFVGADIENLCNEAAIVAARRDKKKIEMDDFESATDRVIGGLESNKLIMPEEKRIVAYHEAGHAVAGWNLEHADPLMKVTIVPRGSSTLGYAQYLPKEVFLRTREQITDIICMALAGRASEQVHFGDVTTGASDDLRRVTAMVYQMIGVYGMGDGIGQLAFPQENGGGGFPQE-RPYSDATAEKMDLEARKMVDSAYQRTLELVEAKKEQVRRTASVEL 762 RPDI GRK IF VHLKGLNL ++G+LAGLTPGF GADI NLCNEAAI AAR+ K I+M DFE+A DR+IGGLES+KLI PEEKRIVAYHEAGHAVAGWNLEHADPL+KVTIVPRG+ LGYAQYLPKEVFLRTREQI DI+CMALAGRASEQVHFG VTTGASDDLR+VT MVYQMI VYGM + +GQLAFP G P E RPYSDATA MD +A++MVD AY RTLE++ + QV A + L Sbjct: 315 RPDIQGRKEIFLVHLKGLNLAEAPETYAGKLAGLTPGFAGADIANLCNEAAIQAARKAKAAIDMADFEAAADRIIGGLESHKLITPEEKRIVAYHEAGHAVAGWNLEHADPLLKVTIVPRGNGALGYAQYLPKEVFLRTREQINDIVCMALAGRASEQVHFGAVTTGASDDLRKVTDMVYQMIKVYGMNERVGQLAFPSS----GEPMEQRPYSDATAALMDEQAKEMVDKAYARTLEVIRKHQGQVEALAQLLL 565
BLAST of mRNA_H-canaliculatus_F_contig11036.949.1 vs. uniprot
Match: A0A7S1U0S3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U0S3_9STRA) HSP 1 Score: 343 bits (880), Expect = 1.580e-112 Identity = 174/256 (67.97%), Postives = 210/256 (82.03%), Query Frame = 1 Query: 1 RPDIMGRKAIFEVHLKGLNLDGKSSE--FSGRLAGLTPGFVGADIENLCNEAAIVAARRDKKKIEMDDFESATDRVIGGLESNKLIMPEEKRIVAYHEAGHAVAGWNLEHADPLMKVTIVPRGSSTLGYAQYLPKEVFLRTREQITDIICMALAGRASEQVHFGDVTTGASDDLRRVTAMVYQMIGVYGMGDGIGQLAFPQENGGGGFPQERPYSDATAEKMDLEARKMVDSAYQRTLELVEAKKEQVRRTASVEL 762 RPDI GRK +F VH++ LNL G++ + +GRLA LTPGFVGADI N+CNEAAI+AAR DKK++E+ DFE A DRVIGGLES++L+ +EK IVAYHEAGHAVAGWNLEHADPL+KVTI+PR S LG+AQYLPKEV LRT EQ+ DI+CMALAGRA+E+V FG VTTGASDDLRRVT M+YQMI +YGM + +GQLAFP+++ GG FP ERPYS+ TA+ MD EA++MVD AYQRTL LV K +QV A + L Sbjct: 63 RPDIRGRKEVFLVHMRNLNLGGETDQDDLAGRLAALTPGFVGADIANICNEAAIMAARDDKKQVELPDFEKAIDRVIGGLESHRLLDKQEKEIVAYHEAGHAVAGWNLEHADPLLKVTILPRTSGALGFAQYLPKEVSLRTEEQMMDIVCMALAGRAAEEVKFGRVTTGASDDLRRVTDMIYQMIKIYGMNERVGQLAFPKQDNGG-FPDERPYSEKTAQLMDEEAKRMVDEAYQRTLGLVREKVDQVEALAQMLL 317
BLAST of mRNA_H-canaliculatus_F_contig11036.949.1 vs. uniprot
Match: A0A7S2IDC1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IDC1_9STRA) HSP 1 Score: 342 bits (876), Expect = 3.980e-112 Identity = 170/254 (66.93%), Postives = 208/254 (81.89%), Query Frame = 1 Query: 1 RPDIMGRKAIFEVHLKGLNLDGKSSEFSGRLAGLTPGFVGADIENLCNEAAIVAARRDKKKIEMDDFESATDRVIGGLESNKLIMPEEKRIVAYHEAGHAVAGWNLEHADPLMKVTIVPRGSSTLGYAQYLPKEVFLRTREQITDIICMALAGRASEQVHFGDVTTGASDDLRRVTAMVYQMIGVYGMGDGIGQLAFPQENGGGGFPQERPYSDATAEKMDLEARKMVDSAYQRTLELVEAKKEQVRRTASVEL 762 +PD+ GRK IF+VHLKG+ LDG+ + +GRLAGLTPGF GADI N+CNEAAIVAARR + + + DFE ATDRVIGGLESNK++ EE+ IVA+HEAGHAVAGW LEHADPL+KVTI+PR S LGYAQYLPKEVFLRT+EQI DI+ MALAGRA+E++ FG VTTGASDDLRRVT +VY I +YGM +GQLAFP++ P ++PYSDATAE MD EAR++VD+AYQRTL+L+ KKE+V + A++ L Sbjct: 29 KPDLQGRKEIFQVHLKGITLDGEVDDIAGRLAGLTPGFAGADIANICNEAAIVAARRKAEAVAIVDFEKATDRVIGGLESNKIMSKEERDIVAHHEAGHAVAGWFLEHADPLLKVTIIPRSSGALGYAQYLPKEVFLRTQEQIMDIVSMALAGRAAEEIFFGRVTTGASDDLRRVTELVYSTIQIYGMNSRVGQLAFPKDPNA--MPGDKPYSDATAEAMDEEARQIVDAAYQRTLDLIREKKEEVEKVANLLL 280
BLAST of mRNA_H-canaliculatus_F_contig11036.949.1 vs. uniprot
Match: A0A7R9UFE2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFE2_9STRA) HSP 1 Score: 342 bits (877), Expect = 9.760e-111 Identity = 177/279 (63.44%), Postives = 216/279 (77.42%), Query Frame = 1 Query: 1 RPDIMGRKAIFEVHLKGLNL--DGKSSEFSGRLAGLTPGFVGADIENLCNEAAIVAARRDKKKIEMDDFESATDRVIGGLESNKLIMPEEKRIVAYHEAGHAVAGWNLEHADPLMKVTIVPRGSSTLGYAQYLPKEVFLRTREQITDIICMALAGRASEQVHFGDVTTGASDDLRRVTAMVYQMIGVYGMGDGIGQLAFPQENGGGGFPQERPYSDATAEKMDLEARKMVDSAYQRTLELVEAKKEQVRRTASVELPPGFPSSASSLSFFLPR*EETQQ 831 RPDI GRK +F VH++ L+L D + E +GRLA LTPGFVG+DI N+CNEAAI AAR DK K+E+ DFE A DR+IGGLES++L+ EK +VAYHEAGHAVAGWNLEHADPL+KVTI+PR S LG+AQYLPKEV LR+++QI D ICMALAGRASE+V+FG VTTGASDDLRRVT M+YQMI VYGM + IGQLAFP++ GG FP+ERPYS+ TA+ MD EAR+MVD AY+RT++L++ KK QV A + L S +S PR + Q Sbjct: 130 RPDIAGRKEVFLVHMRKLSLGADANTDELAGRLAALTPGFVGSDIANICNEAAIQAARLDKNKVELSDFERAIDRIIGGLESHRLLDKNEKEVVAYHEAGHAVAGWNLEHADPLLKVTILPRTSGALGFAQYLPKEVNLRSKDQIMDQICMALAGRASEEVNFGRVTTGASDDLRRVTGMIYQMIQVYGMNEKIGQLAFPRQQTGG-FPEERPYSEQTAQTMDEEARRMVDEAYKRTIKLIQDKKHQVEALAQMLLEKETISHDDIVSSIGPRPFQNNQ 407
BLAST of mRNA_H-canaliculatus_F_contig11036.949.1 vs. uniprot
Match: A0A7S2U6Q7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U6Q7_9STRA) HSP 1 Score: 342 bits (878), Expect = 1.320e-110 Identity = 171/254 (67.32%), Postives = 207/254 (81.50%), Query Frame = 1 Query: 1 RPDIMGRKAIFEVHLKGLNLDGKSSEFSGRLAGLTPGFVGADIENLCNEAAIVAARRDKKKIEMDDFESATDRVIGGLESNKLIMPEEKRIVAYHEAGHAVAGWNLEHADPLMKVTIVPRGSSTLGYAQYLPKEVFLRTREQITDIICMALAGRASEQVHFGDVTTGASDDLRRVTAMVYQMIGVYGMGDGIGQLAFPQENGGGGFPQERPYSDATAEKMDLEARKMVDSAYQRTLELVEAKKEQVRRTASVEL 762 +PD+ GRK IF+VHL+G+ L+G+ + +GRLAGLTPGF GADI N+CNEAAIVAARR + + DDFE ATDR++GGLESNK++ EE+ IVA+HEAGHAVAGW LEHADPL+KVTI+PR S LGYAQYLPKEVFLRT++QI DI+CMALAGRA+E+V FG VTTGASDDLRRVT +VY I VYGM +GQLAFPQ+ P ++PYSDATAE MD EAR +VD+AYQRTL LV KK+QV + A++ L Sbjct: 158 KPDLQGRKEIFQVHLRGIKLEGEVDDVAGRLAGLTPGFAGADIANICNEAAIVAARRKGESVCYDDFERATDRIVGGLESNKIMSKEERSIVAHHEAGHAVAGWFLEHADPLLKVTIIPRTSGALGYAQYLPKEVFLRTQDQIMDIVCMALAGRAAEEVFFGGVTTGASDDLRRVTGLVYSTIQVYGMNQRVGQLAFPQDPNA--MPGDKPYSDATAEAMDEEARAIVDAAYQRTLALVREKKDQVEKIANLLL 409 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11036.949.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig11036.949.1 >prot_H-canaliculatus_F_contig11036.949.1 ID=prot_H-canaliculatus_F_contig11036.949.1|Name=mRNA_H-canaliculatus_F_contig11036.949.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=268bp MGRKAIFEVHLKGLNLDGKSSEFSGRLAGLTPGFVGADIENLCNEAAIVAback to top mRNA from alignment at H-canaliculatus_F_contig11036:236..4310+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig11036.949.1 ID=mRNA_H-canaliculatus_F_contig11036.949.1|Name=mRNA_H-canaliculatus_F_contig11036.949.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=4075bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11036:236..4310+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11036:236..4310+ >mRNA_H-canaliculatus_F_contig11036.949.1 ID=mRNA_H-canaliculatus_F_contig11036.949.1|Name=mRNA_H-canaliculatus_F_contig11036.949.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1608bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11036:236..4310+ (Hapterophycus canaliculatus Oshoro5f female)back to top |