mRNA_H-canaliculatus_F_contig11009.935.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig11009.935.1
Unique NamemRNA_H-canaliculatus_F_contig11009.935.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig11009.935.1 vs. uniprot
Match: A9Y5I1_ZYMTI (ATP synthase subunit 9, mitochondrial n=15 Tax=cellular organisms TaxID=131567 RepID=A9Y5I1_ZYMTI)

HSP 1 Score: 130 bits (328), Expect = 2.250e-38
Identity = 71/74 (95.95%), Postives = 74/74 (100.00%), Query Frame = 1 
Query:    1 MLQAAKIIGTGMATTGLIGAGVGIGIVFGALILGVARNPSLRGQLFSYAILGFAFAEATGLFALMMAFLLLYVA 222
            M+QAAKIIGTG+ATTGLIGAGVGIG+VFGALILGVARNPSLRGQLFSYAILGFAFAEATGLFALMMAFLLLYVA
Sbjct:    1 MIQAAKIIGTGLATTGLIGAGVGIGVVFGALILGVARNPSLRGQLFSYAILGFAFAEATGLFALMMAFLLLYVA 74
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BLAST of mRNA_H-canaliculatus_F_contig11009.935.1 vs. uniprot
Match: A0A4Q3E9F7_9RICK (ATP synthase subunit c n=99 Tax=cellular organisms TaxID=131567 RepID=A0A4Q3E9F7_9RICK)

HSP 1 Score: 130 bits (327), Expect = 3.190e-38
Identity = 70/74 (94.59%), Postives = 74/74 (100.00%), Query Frame = 1 
Query:    1 MLQAAKIIGTGMATTGLIGAGVGIGIVFGALILGVARNPSLRGQLFSYAILGFAFAEATGLFALMMAFLLLYVA 222
            M+QAAKIIGTGMATTGLIGAG+GIG+VFGALILGVARNPSLRGQLFSYAILGFAF+EATGLFALMMAFLLLYVA
Sbjct:    1 MIQAAKIIGTGMATTGLIGAGIGIGVVFGALILGVARNPSLRGQLFSYAILGFAFSEATGLFALMMAFLLLYVA 74
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BLAST of mRNA_H-canaliculatus_F_contig11009.935.1 vs. uniprot
Match: A0A4V1ZIM3_9BACT (ATP synthase subunit c n=20 Tax=cellular organisms TaxID=131567 RepID=A0A4V1ZIM3_9BACT)

HSP 1 Score: 129 bits (325), Expect = 6.630e-38
Identity = 70/74 (94.59%), Postives = 74/74 (100.00%), Query Frame = 1 
Query:    1 MLQAAKIIGTGMATTGLIGAGVGIGIVFGALILGVARNPSLRGQLFSYAILGFAFAEATGLFALMMAFLLLYVA 222
            M+QAAKIIGTG+ATTGLIGAGVGIG+VFGALILGVARNPSLRGQLFSYAILGFAF+EATGLFALMMAFLLLYVA
Sbjct:    2 MIQAAKIIGTGLATTGLIGAGVGIGVVFGALILGVARNPSLRGQLFSYAILGFAFSEATGLFALMMAFLLLYVA 75
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BLAST of mRNA_H-canaliculatus_F_contig11009.935.1 vs. uniprot
Match: A0A4Q3E7P7_9RICK (ATP synthase subunit c n=26 Tax=cellular organisms TaxID=131567 RepID=A0A4Q3E7P7_9RICK)

HSP 1 Score: 129 bits (323), Expect = 1.340e-37
Identity = 69/74 (93.24%), Postives = 74/74 (100.00%), Query Frame = 1 
Query:    1 MLQAAKIIGTGMATTGLIGAGVGIGIVFGALILGVARNPSLRGQLFSYAILGFAFAEATGLFALMMAFLLLYVA 222
            M+QAAKI+GTG+ATTGLIGAGVGIG+VFGALILGVARNPSLRGQLFSYAILGFAF+EATGLFALMMAFLLLYVA
Sbjct:    2 MIQAAKILGTGLATTGLIGAGVGIGVVFGALILGVARNPSLRGQLFSYAILGFAFSEATGLFALMMAFLLLYVA 75
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BLAST of mRNA_H-canaliculatus_F_contig11009.935.1 vs. uniprot
Match: A0A6G6D9K1_9PEZI (ATP synthase subunit 9, mitochondrial n=2 Tax=Sordariomycetes TaxID=147550 RepID=A0A6G6D9K1_9PEZI)

HSP 1 Score: 128 bits (321), Expect = 2.630e-37
Identity = 69/74 (93.24%), Postives = 74/74 (100.00%), Query Frame = 1 
Query:    1 MLQAAKIIGTGMATTGLIGAGVGIGIVFGALILGVARNPSLRGQLFSYAILGFAFAEATGLFALMMAFLLLYVA 222
            M+QAAKIIGTG+ATTGLIGAGVGIG+VFGALILGVARNPSLRGQLFSYAILGFAF+EATGLFAL+MAFLLLYVA
Sbjct:    1 MIQAAKIIGTGLATTGLIGAGVGIGVVFGALILGVARNPSLRGQLFSYAILGFAFSEATGLFALIMAFLLLYVA 74
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BLAST of mRNA_H-canaliculatus_F_contig11009.935.1 vs. uniprot
Match: ATP9_TRIRU (ATP synthase subunit 9, mitochondrial n=6 Tax=leotiomyceta TaxID=716546 RepID=ATP9_TRIRU)

HSP 1 Score: 127 bits (318), Expect = 7.540e-37
Identity = 69/74 (93.24%), Postives = 73/74 (98.65%), Query Frame = 1 
Query:    1 MLQAAKIIGTGMATTGLIGAGVGIGIVFGALILGVARNPSLRGQLFSYAILGFAFAEATGLFALMMAFLLLYVA 222
            M+QAAKIIGTG+ATTGLIGAGVGIG+VFGALILGVARNPSLRG LFSYAILGFAF+EATGLFALMMAFLLLYVA
Sbjct:    1 MIQAAKIIGTGLATTGLIGAGVGIGVVFGALILGVARNPSLRGLLFSYAILGFAFSEATGLFALMMAFLLLYVA 74
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BLAST of mRNA_H-canaliculatus_F_contig11009.935.1 vs. uniprot
Match: A0A4Q3E9V4_9RICK (ATP synthase subunit c n=5 Tax=cellular organisms TaxID=131567 RepID=A0A4Q3E9V4_9RICK)

HSP 1 Score: 127 bits (318), Expect = 7.540e-37
Identity = 68/74 (91.89%), Postives = 74/74 (100.00%), Query Frame = 1 
Query:    1 MLQAAKIIGTGMATTGLIGAGVGIGIVFGALILGVARNPSLRGQLFSYAILGFAFAEATGLFALMMAFLLLYVA 222
            M+QAAK+IG+G+ATTGLIGAGVGIGIVFGALILGVARNPSLRGQLFSYAILGFAF+EATGLFALMMAFL+LYVA
Sbjct:    1 MIQAAKLIGSGLATTGLIGAGVGIGIVFGALILGVARNPSLRGQLFSYAILGFAFSEATGLFALMMAFLILYVA 74
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BLAST of mRNA_H-canaliculatus_F_contig11009.935.1 vs. uniprot
Match: F8QX19_9EURO (ATP synthase subunit 9, mitochondrial n=1 Tax=Endocarpon pusillum TaxID=364733 RepID=F8QX19_9EURO)

HSP 1 Score: 125 bits (314), Expect = 3.440e-36
Identity = 67/74 (90.54%), Postives = 73/74 (98.65%), Query Frame = 1 
Query:    1 MLQAAKIIGTGMATTGLIGAGVGIGIVFGALILGVARNPSLRGQLFSYAILGFAFAEATGLFALMMAFLLLYVA 222
            M+QAA+IIGTG+ATTGLIGAGVGIG+VFGALI+GV+RNPSLR QLFSYAILGFAFAEATGLFALMMAFLLLYVA
Sbjct:    5 MIQAARIIGTGLATTGLIGAGVGIGVVFGALIIGVSRNPSLRAQLFSYAILGFAFAEATGLFALMMAFLLLYVA 78
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BLAST of mRNA_H-canaliculatus_F_contig11009.935.1 vs. uniprot
Match: V5REB0_9PEZI (ATP synthase subunit 9, mitochondrial n=2 Tax=Annulohypoxylon stygium TaxID=326628 RepID=V5REB0_9PEZI)

HSP 1 Score: 124 bits (312), Expect = 6.210e-36
Identity = 66/74 (89.19%), Postives = 73/74 (98.65%), Query Frame = 1 
Query:    1 MLQAAKIIGTGMATTGLIGAGVGIGIVFGALILGVARNPSLRGQLFSYAILGFAFAEATGLFALMMAFLLLYVA 222
            MLQAAKIIGTG+ATTGLIGAGVGIG+VFGALILGV+RNP+LR QLFSYA+LGFAFAEATG+FALMMAFL+LYVA
Sbjct:    1 MLQAAKIIGTGLATTGLIGAGVGIGVVFGALILGVSRNPTLRAQLFSYAVLGFAFAEATGVFALMMAFLILYVA 74
[Close]
BLAST of mRNA_H-canaliculatus_F_contig11009.935.1 vs. uniprot
Match: A0A1I7PC14_9LECA (ATP synthase subunit 9, mitochondrial n=6 Tax=cellular organisms TaxID=131567 RepID=A0A1I7PC14_9LECA)

HSP 1 Score: 124 bits (310), Expect = 1.250e-35
Identity = 65/73 (89.04%), Postives = 73/73 (100.00%), Query Frame = 1 
Query:    1 MLQAAKIIGTGMATTGLIGAGVGIGIVFGALILGVARNPSLRGQLFSYAILGFAFAEATGLFALMMAFLLLYV 219
            M+QAAKIIGTG+ATTGLIGAGVGIG+VFGALILGVARNP+++GQLFSYAILGFAF+EATGLFALMMAFLLL+V
Sbjct:    1 MIQAAKIIGTGLATTGLIGAGVGIGVVFGALILGVARNPAIKGQLFSYAILGFAFSEATGLFALMMAFLLLFV 73
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11009.935.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A9Y5I1_ZYMTI2.250e-3895.95ATP synthase subunit 9, mitochondrial n=15 Tax=cel... [more]
A0A4Q3E9F7_9RICK3.190e-3894.59ATP synthase subunit c n=99 Tax=cellular organisms... [more]
A0A4V1ZIM3_9BACT6.630e-3894.59ATP synthase subunit c n=20 Tax=cellular organisms... [more]
A0A4Q3E7P7_9RICK1.340e-3793.24ATP synthase subunit c n=26 Tax=cellular organisms... [more]
A0A6G6D9K1_9PEZI2.630e-3793.24ATP synthase subunit 9, mitochondrial n=2 Tax=Sord... [more]
ATP9_TRIRU7.540e-3793.24ATP synthase subunit 9, mitochondrial n=6 Tax=leot... [more]
A0A4Q3E9V4_9RICK7.540e-3791.89ATP synthase subunit c n=5 Tax=cellular organisms ... [more]
F8QX19_9EURO3.440e-3690.54ATP synthase subunit 9, mitochondrial n=1 Tax=Endo... [more]
V5REB0_9PEZI6.210e-3689.19ATP synthase subunit 9, mitochondrial n=2 Tax=Annu... [more]
A0A1I7PC14_9LECA1.250e-3589.04ATP synthase subunit 9, mitochondrial n=6 Tax=cell... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig11009contigH-canaliculatus_F_contig11009:3738..3962 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score132.5
Seed ortholog evalue8.2e-29
Seed eggNOG ortholog36651.K9FSH2
Preferred nameatp9
KEGG rclassRC00061
KEGG koko:K02128,ko:K03880
KEGG TC3.A.2.1,3.D.1.6
KEGG ReactionR11945
KEGG Pathwayko00190,ko01100,ko04714,ko04723,ko05010,ko05012,ko05016,map00190,map01100,map04714,map04723,map05010,map05012,map05016
KEGG ModuleM00142,M00158
GOsGO:0000276,GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005753,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006839,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016021,GO:0016310,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0019866,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031975,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0042776,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046907,GO:0046933,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098798,GO:0098800,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600,GO:1990542
EggNOG free text desc.Belongs to the ATPase C chain family
EggNOG OGs3A3YG@33154,3P7BC@4751,3RJ7E@4890,COG0636@1,KOG3025@2759
EC1.6.5.3
COG Functional cat.P
Best tax levelAscomycota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03029
Hectar predicted targeting categorysignal anchor
Exons1
Model size225
Cds size225
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928777.3563452-CDS-H-canaliculatus_F_contig11009:3737..39621622928777.3563452-CDS-H-canaliculatus_F_contig11009:3737..3962Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11009 3738..3962 -
1696845560.0204523-CDS-H-canaliculatus_F_contig11009:3737..39621696845560.0204523-CDS-H-canaliculatus_F_contig11009:3737..3962Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11009 3738..3962 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig11009.935.1prot_H-canaliculatus_F_contig11009.935.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig11009 3738..3962 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig11009.935.1

>prot_H-canaliculatus_F_contig11009.935.1 ID=prot_H-canaliculatus_F_contig11009.935.1|Name=mRNA_H-canaliculatus_F_contig11009.935.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=75bp
MLQAAKIIGTGMATTGLIGAGVGIGIVFGALILGVARNPSLRGQLFSYAI
LGFAFAEATGLFALMMAFLLLYVA*
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mRNA from alignment at H-canaliculatus_F_contig11009:3738..3962-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig11009.935.1 ID=mRNA_H-canaliculatus_F_contig11009.935.1|Name=mRNA_H-canaliculatus_F_contig11009.935.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=225bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11009:3738..3962- (Hapterophycus canaliculatus Oshoro5f female)
ATGTTACAAGCAGCTAAAATTATAGGTACTGGTATGGCCACAACGGGATT
AATAGGAGCAGGAGTAGGTATAGGTATAGTTTTTGGTGCATTAATACTAG
GTGTAGCAAGAAATCCTTCTTTAAGAGGACAATTATTTTCATATGCTATA
CTAGGTTTTGCATTTGCAGAAGCAACAGGATTATTTGCTTTGATGATGGC
TTTTTTATTACTATATGTAGCTTAA
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11009:3738..3962-

>mRNA_H-canaliculatus_F_contig11009.935.1 ID=mRNA_H-canaliculatus_F_contig11009.935.1|Name=mRNA_H-canaliculatus_F_contig11009.935.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=450bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11009:3738..3962- (Hapterophycus canaliculatus Oshoro5f female)
ATGTTACAAGCAGCTAAAATTATAGGTACTGGTATGGCCACAACGGGATT
AATAGGAGCAGGAGTAGGTATAGGTATAGTTTTTGGTGCATTAATACTAG
GTGTAGCAAGAAATCCTTCTTTAAGAGGACAATTATTTTCATATGCTATA
CTAGGTTTTGCATTTGCAGAAGCAACAGGATTATTTGCTTTGATGATGGC
TTTTTTATTACTATATGTAGCTTAAATGTTACAAGCAGCTAAAATTATAG
GTACTGGTATGGCCACAACGGGATTAATAGGAGCAGGAGTAGGTATAGGT
ATAGTTTTTGGTGCATTAATACTAGGTGTAGCAAGAAATCCTTCTTTAAG
AGGACAATTATTTTCATATGCTATACTAGGTTTTGCATTTGCAGAAGCAA
CAGGATTATTTGCTTTGATGATGGCTTTTTTATTACTATATGTAGCTTAA
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