mRNA_H-canaliculatus_F_contig11009.933.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig11009.933.1
Unique NamemRNA_H-canaliculatus_F_contig11009.933.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig11009.933.1 vs. uniprot
Match: A0A0G3IVY2_PENRO (Uncharacterized protein n=1 Tax=Penicillium roqueforti TaxID=5082 RepID=A0A0G3IVY2_PENRO)

HSP 1 Score: 568 bits (1463), Expect = 1.050e-200
Identity = 284/285 (99.65%), Postives = 284/285 (99.65%), Query Frame = 3
Query:  690 MFRNLWNITQQYAYSYPICIYKRFLTLIKRTNGQLNIQQKMNMTTIKLKRYILISLTKIYLDLIIDCKAGDRLYFIYRIIIIVLFIYTFINNNPSLLLELLDNLNYNYLNQLYDDSFIKINRGKFSYT*NEFNQRSRGYNNGSGGPNHNPNPSLYEVENTRKRLEEENKQSGEPSRMQFKPSELENVRLGDNPSRVFQFCYYSSVEKRMVYPEDFHPGLPILLNHDRFRVYIDNGISYTYNYRSLDPSQHYCMIEYLDGSKCYLNDASKIAANIEYHRRPIKDPS 1544
            MFRNLWNITQQYAYSYPICIYKRFLTLIKRTNGQLNIQQKMNMTTIKLKRYILISLTKIYLDLIIDCKAGDRLYFIYRIIIIVLFIYTFINNNPSLLLELLDNLNYNYLNQLYDDSFIKINRGKFSYT NEFNQRSRGYNNGSGGPNHNPNPSLYEVENTRKRLEEENKQSGEPSRMQFKPSELENVRLGDNPSRVFQFCYYSSVEKRMVYPEDFHPGLPILLNHDRFRVYIDNGISYTYNYRSLDPSQHYCMIEYLDGSKCYLNDASKIAANIEYHRRPIKDPS
Sbjct:    1 MFRNLWNITQQYAYSYPICIYKRFLTLIKRTNGQLNIQQKMNMTTIKLKRYILISLTKIYLDLIIDCKAGDRLYFIYRIIIIVLFIYTFINNNPSLLLELLDNLNYNYLNQLYDDSFIKINRGKFSYTWNEFNQRSRGYNNGSGGPNHNPNPSLYEVENTRKRLEEENKQSGEPSRMQFKPSELENVRLGDNPSRVFQFCYYSSVEKRMVYPEDFHPGLPILLNHDRFRVYIDNGISYTYNYRSLDPSQHYCMIEYLDGSKCYLNDASKIAANIEYHRRPIKDPS 285          
BLAST of mRNA_H-canaliculatus_F_contig11009.933.1 vs. uniprot
Match: A0A3G5AVQ8_ASPKA (Cytochrome c oxidase subunit 2 n=38 Tax=cellular organisms TaxID=131567 RepID=A0A3G5AVQ8_ASPKA)

HSP 1 Score: 437 bits (1123), Expect = 1.410e-149
Identity = 221/252 (87.70%), Postives = 235/252 (93.25%), Query Frame = 1
Query:   34 MFLYNYISKLQLDAPTPWGVFFQDSASPQMEGIEELHNNIMFYLAIILFTVT*MIITILRNFLANKSPIAHKFMNHGTLIELI*TISPAFILILIAFPSFKLLYLMDEVMDPSLVVYAEGHQ*Y*SYQYPDFTNSDDEFIEFDSYIVPESDLEQGQFRMLEVDNRVMIPELTHTRIVISAADVIHSYACPSLGIKADAYPGRLNQASVYINRPGVFFGQCSEICGILHSSMPIAIQSVSIKDFLL*LREQMD 789
            MFL      + LDAPTPWGVFFQD+ASPQMEGIEELHNNIMFYLA+ILFTVT M+I I++NF+A KSPIAHK+MNHGTLIELI TI+PAFILILIAFPSFKLLYLMDEVMDPSLVVYAEGHQ Y SYQYPDFTN DDEFIEFDSYIVPESDLE+GQFRMLEVDNRV+IPELTHTR VISAADVIHSYACPSLGIKADAYPGRLNQASVY+NRPG FFGQCSEICGILHSSMPIAIQSVSI+DFLL LREQM+
Sbjct:    1 MFLDILKGHILLDAPTPWGVFFQDNASPQMEGIEELHNNIMFYLAVILFTVTWMMIIIIKNFVATKSPIAHKYMNHGTLIELIWTITPAFILILIAFPSFKLLYLMDEVMDPSLVVYAEGHQWYWSYQYPDFTNEDDEFIEFDSYIVPESDLEEGQFRMLEVDNRVIIPELTHTRFVISAADVIHSYACPSLGIKADAYPGRLNQASVYVNRPGTFFGQCSEICGILHSSMPIAIQSVSIRDFLLWLREQME 252          
BLAST of mRNA_H-canaliculatus_F_contig11009.933.1 vs. uniprot
Match: COX2_EMEND (Cytochrome c oxidase subunit 2 n=2 Tax=Aspergillus TaxID=5052 RepID=COX2_EMEND)

HSP 1 Score: 423 bits (1087), Expect = 3.900e-144
Identity = 218/252 (86.51%), Postives = 231/252 (91.67%), Query Frame = 1
Query:   34 MFLYNYISKLQLDAPTPWGVFFQDSASPQMEGIEELHNNIMFYLAIILFTVT*MIITILRNFLANKSPIAHKFMNHGTLIELI*TISPAFILILIAFPSFKLLYLMDEVMDPSLVVYAEGHQ*Y*SYQYPDFTNSDDEFIEFDSYIVPESDLEQGQFRMLEVDNRVMIPELTHTRIVISAADVIHSYACPSLGIKADAYPGRLNQASVYINRPGVFFGQCSEICGILHSSMPIAIQSVSIKDFLL*LREQMD 789
            MFL      + +DAPTPWG+FFQDSASPQMEGI ELHNNIMFYLAIILFTVT M+ITI+RNF+A KSPIAHK+MNHGTLIELI TI+PAFILILIAFPSFKLLYLMDEVMDPSLVVYAEGHQ Y SYQYPDFTN D+EFIEFDSYIVPESDLE+GQFRMLEVDNRV+IPELTHT  VISA DVIHSYACPSLGIKADAYPGRLNQASVYIN PG FFGQCSEICGILHSSM IAIQSVSIKDFLL LR+QM+
Sbjct:    1 MFLIMLKGHILMDAPTPWGIFFQDSASPQMEGIMELHNNIMFYLAIILFTVTWMMITIIRNFVAKKSPIAHKYMNHGTLIELIWTITPAFILILIAFPSFKLLYLMDEVMDPSLVVYAEGHQWYWSYQYPDFTNEDNEFIEFDSYIVPESDLEEGQFRMLEVDNRVIIPELTHTAFVISA-DVIHSYACPSLGIKADAYPGRLNQASVYINGPGTFFGQCSEICGILHSSMNIAIQSVSIKDFLLWLRDQME 251          
BLAST of mRNA_H-canaliculatus_F_contig11009.933.1 vs. uniprot
Match: M4GGS9_TALMQ (Cytochrome c oxidase subunit 2 n=3 Tax=Talaromyces sect. Talaromyces TaxID=2752537 RepID=M4GGS9_TALMQ)

HSP 1 Score: 422 bits (1084), Expect = 1.070e-143
Identity = 207/247 (83.81%), Postives = 231/247 (93.52%), Query Frame = 1
Query:   52 ISKLQLDAPTPWGVFFQDSASPQMEGIEELHNNIMFYLAIILFTVT*MIITILRNFLANKSPIAHKFMNHGTLIELI*TISPAFILILIAFPSFKLLYLMDEVMDPSLVVYAEGHQ*Y*SYQYPDFTNSDDEFIEFDSYIVPESDLEQGQFRMLEVDNRVMIPELTHTRIVISAADVIHSYACPSLGIKADAYPGRLNQASVYINRPGVFFGQCSEICGILHSSMPIAIQSVSIKDFLL*LREQMDN 792
            I  LQLDAPTPWG+FFQDSA+PQMEG+EELHNNIMFYLA+ILFTV  ++IT++RNF+A+KSPI+HK+MNHGTLIELI TI+PA ILILIAFPSFKLLYLMDEVMDPSLV+Y EGHQ Y SYQYPDFTN + EF+EFDSYI+PESDLE+G+FRMLEVDNRV+IPELTHTR VISAADVIHSYACPSLGIK DAYPGRLNQASVY+NR G FFGQCSEICGILHSSMPIAIQSVSIKDFLL LR+Q+D+
Sbjct:    5 IDILQLDAPTPWGLFFQDSATPQMEGLEELHNNIMFYLAVILFTVVWIMITVVRNFIASKSPISHKYMNHGTLIELIWTITPALILILIAFPSFKLLYLMDEVMDPSLVIYGEGHQWYWSYQYPDFTNDEGEFVEFDSYIIPESDLEEGRFRMLEVDNRVVIPELTHTRFVISAADVIHSYACPSLGIKVDAYPGRLNQASVYLNRKGTFFGQCSEICGILHSSMPIAIQSVSIKDFLLWLRDQIDS 251          
BLAST of mRNA_H-canaliculatus_F_contig11009.933.1 vs. uniprot
Match: C5HA19_TRIRU (Cytochrome c oxidase subunit 2 n=7 Tax=Arthrodermataceae TaxID=34384 RepID=C5HA19_TRIRU)

HSP 1 Score: 402 bits (1034), Expect = 6.400e-136
Identity = 198/242 (81.82%), Postives = 222/242 (91.74%), Query Frame = 1
Query:   61 LQLDAPTPWGVFFQDSASPQMEGIEELHNNIMFYLAIILFTVT*MIITILRNFLANKSPIAHKFMNHGTLIELI*TISPAFILILIAFPSFKLLYLMDEVMDPSLVVYAEGHQ*Y*SYQYPDFTNSDDEFIEFDSYIVPESDLEQGQFRMLEVDNRVMIPELTHTRIVISAADVIHSYACPSLGIKADAYPGRLNQASVYINRPGVFFGQCSEICGILHSSMPIAIQSVSIKDFLL*LREQM 786
            + LDAPTPWG+FFQDSA+PQMEGIEELHNNIMFYL IILF+VT M+ITI+++F+  KSPI+HK+MNHGTLIELI TI+PA ILILIAFPSFKLLYLMDEVMDPSLV+Y EGHQ Y SYQYPDFTN+D EF+EFDSYIVPESDLE+G  RMLEVDNRV+IPELTHTR VISAADVIHS+ACPSLGIK DAYPGRLNQ+SVY+NR G +FGQCSEICGILHSSMPI IQSVS+K FLL LR+Q+
Sbjct:   21 INLDAPTPWGLFFQDSATPQMEGIEELHNNIMFYLTIILFSVTWMMITIIKSFVNTKSPISHKYMNHGTLIELIWTITPAVILILIAFPSFKLLYLMDEVMDPSLVIYGEGHQWYWSYQYPDFTNADGEFVEFDSYIVPESDLEEGTLRMLEVDNRVIIPELTHTRFVISAADVIHSFACPSLGIKCDAYPGRLNQSSVYLNRQGTYFGQCSEICGILHSSMPIVIQSVSLKKFLLWLRDQL 262          
BLAST of mRNA_H-canaliculatus_F_contig11009.933.1 vs. uniprot
Match: Q1XA91_PARBD (Cytochrome c oxidase subunit 2 n=3 Tax=Paracoccidioides TaxID=38946 RepID=Q1XA91_PARBD)

HSP 1 Score: 393 bits (1010), Expect = 1.930e-132
Identity = 196/248 (79.03%), Postives = 222/248 (89.52%), Query Frame = 1
Query:   49 YISKLQLDAPTPWGVFFQDSASPQMEGIEELHNNIMFYLAIILFTVT*MIITILRNFLANKSPIAHKFMNHGTLIELI*TISPAFILILIAFPSFKLLYLMDEVMDPSLVVYAEGHQ*Y*SYQYPDFTNSDDEFIEFDSYIVPESDLEQGQFRMLEVDNRVMIPELTHTRIVISAADVIHSYACPSLGIKADAYPGRLNQASVYINRPGVFFGQCSEICGILHSSMPIAIQSVSIKDFLL*LREQMDN 792
            YIS   LDAPT WG++FQDSA+PQMEGIEELHNNIMFYLAIILFTVT M+I I++ F A+KS I+HK+MNHGTL+ELI TI+PA ILILIAFPSFKLLYLMDEVMDPSLV+Y EG+Q Y  YQYPDFTN ++EFIEFDSYIVPE+DL++G  RMLEVDNRV+IPELTHTR V+SAADVIHS+ACPSLGIK DAYPGRLNQ+S+Y+ R G FFGQCSEICGILHSSMPI IQSVS+K FLL LREQM+N
Sbjct:    8 YISS-NLDAPTAWGIYFQDSATPQMEGIEELHNNIMFYLAIILFTVTWMMIVIIKTFSASKSVISHKYMNHGTLVELIWTITPAIILILIAFPSFKLLYLMDEVMDPSLVIYGEGNQWYWHYQYPDFTNEENEFIEFDSYIVPETDLDKGSLRMLEVDNRVIIPELTHTRFVVSAADVIHSFACPSLGIKCDAYPGRLNQSSIYLQRQGTFFGQCSEICGILHSSMPIVIQSVSLKKFLLWLREQMNN 254          
BLAST of mRNA_H-canaliculatus_F_contig11009.933.1 vs. uniprot
Match: COX2_TRIRU (Cytochrome c oxidase subunit 2 n=3 Tax=Onygenales TaxID=33183 RepID=COX2_TRIRU)

HSP 1 Score: 391 bits (1005), Expect = 6.000e-132
Identity = 192/234 (82.05%), Postives = 215/234 (91.88%), Query Frame = 1
Query:   61 LQLDAPTPWGVFFQDSASPQMEGIEELHNNIMFYLAIILFTVT*MIITILRNFLANKSPIAHKFMNHGTLIELI*TISPAFILILIAFPSFKLLYLMDEVMDPSLVVYAEGHQ*Y*SYQYPDFTNSDDEFIEFDSYIVPESDLEQGQFRMLEVDNRVMIPELTHTRIVISAADVIHSYACPSLGIKADAYPGRLNQASVYINRPGVFFGQCSEICGILHSSMPIAIQSVSIKDF 762
            + L APTPWG+FFQDSA+PQMEGIEELHNNIMFYL IILF+VT M+ITI+++F+  KSPI+HK+MNHGTLIELI TI+PA ILILIAFPSFKLLYLMDEVMDPSLV+Y EGHQ Y SYQYPDFTN+D EF+EFDSYIVPESDLE+G  RMLEVDNRV+IPELTHTR VISAADVIHS+ACPSLGIK DAYPGRLNQ+SVY+NR G +FGQCSEICGILHSSMPI IQSVS+K+F
Sbjct:    1 MNLVAPTPWGLFFQDSATPQMEGIEELHNNIMFYLTIILFSVTWMMITIIKSFVNTKSPISHKYMNHGTLIELIWTITPAVILILIAFPSFKLLYLMDEVMDPSLVIYGEGHQWYWSYQYPDFTNADGEFVEFDSYIVPESDLEEGTLRMLEVDNRVIIPELTHTRFVISAADVIHSFACPSLGIKCDAYPGRLNQSSVYLNRQGTYFGQCSEICGILHSSMPIVIQSVSLKNF 234          
BLAST of mRNA_H-canaliculatus_F_contig11009.933.1 vs. uniprot
Match: A0A7G0WZX9_AJEDE (Cytochrome c oxidase subunit 2 (Fragment) n=5 Tax=Ajellomycetaceae TaxID=299071 RepID=A0A7G0WZX9_AJEDE)

HSP 1 Score: 387 bits (995), Expect = 9.990e-130
Identity = 196/255 (76.86%), Postives = 222/255 (87.06%), Query Frame = 1
Query:   46 NYISKLQLDAPTPWGVFFQDSASPQMEGIEELHNNIMFYLAIILFTVT*MIITILRNFLANKSPIAHKFMNHGTLIELI*TISPAFILILIAFPSFKLLYLMDEVMDPSLVVYAEG------HQ*Y*SYQYPDFTNSDDEFIEFDSYIVPESDLEQGQFRMLEVDNRVMIPELTHTRIVISAADVIHSYACPSLGIKADAYPGRLNQASVYINRPGVFFGQCSEICGILHSSMPIAIQSVSIKDFLL*LREQMDN 792
            N+     LDAP+PWG++FQDSA+PQMEGIEELHNNIMFYLAIILFTVT M++ I++ F A KS I+HK+MNHGTLIELI TI+PA ILILIAFPSFKLLYLMDEVMDPSLV+Y EG      HQ Y SYQYPDFTN D+EFIEFDSYIVP++DLE+G  RMLEVDNRV+IPELTHTR V+SAADVIHS+A PSLGIK DAYPGRLNQ+SVY+NR G +FGQCSEICGILHSSMPIAIQSVS+K FLL LR+QM +
Sbjct:   29 NFNLNSDLDAPSPWGLYFQDSATPQMEGIEELHNNIMFYLAIILFTVTWMMVVIIKTFKATKSVISHKYMNHGTLIELIWTITPAVILILIAFPSFKLLYLMDEVMDPSLVIYGEGLMYSRMHQWYWSYQYPDFTNVDNEFIEFDSYIVPDADLEEGTLRMLEVDNRVIIPELTHTRFVVSAADVIHSFAVPSLGIKCDAYPGRLNQSSVYLNRQGTYFGQCSEICGILHSSMPIAIQSVSLKKFLLWLRDQMSD 283          
BLAST of mRNA_H-canaliculatus_F_contig11009.933.1 vs. uniprot
Match: A0A286MUM1_9EURO (Cytochrome c oxidase subunit 2 n=1 Tax=Mycocalicium subtile TaxID=124099 RepID=A0A286MUM1_9EURO)

HSP 1 Score: 374 bits (960), Expect = 6.350e-125
Identity = 184/238 (77.31%), Postives = 208/238 (87.39%), Query Frame = 1
Query:   70 DAPTPWGVFFQDSASPQMEGIEELHNNIMFYLAIILFTVT*MIITILRNFLANKSPIAHKFMNHGTLIELI*TISPAFILILIAFPSFKLLYLMDEVMDPSLVVYAEGHQ*Y*SYQYPDFTNSDDEFIEFDSYIVPESDLEQGQFRMLEVDNRVMIPELTHTRIVISAADVIHSYACPSLGIKADAYPGRLNQASVYINRPGVFFGQCSEICGILHSSMPIAIQSVSIKDFLL*LREQ 783
            D P PWG +FQDS +PQMEG+ ELH+NIMFYL IILF+VT +I +I+RN+L +KS I+HK++NHGTLIELI TISPA ILI IAFPSFKLLYLMDEV DPS+ + AEGHQ Y SYQYPDF NSDDEFIEFDSYIVPESDLE G  RMLEVDNRV++PELTH R +++ ADVIHSYACPSLGIK DAYPGRLNQASVY+NR G F+GQCSEICGILHSSMPIAI+SVSI+ FLL LREQ
Sbjct:   14 DTPRPWGTYFQDSGTPQMEGLTELHDNIMFYLVIILFSVTWIIKSIIRNYLNSKSKISHKYLNHGTLIELIWTISPALILIFIAFPSFKLLYLMDEVTDPSMAILAEGHQWYWSYQYPDFLNSDDEFIEFDSYIVPESDLEDGALRMLEVDNRVIVPELTHIRFILTGADVIHSYACPSLGIKCDAYPGRLNQASVYLNREGTFYGQCSEICGILHSSMPIAIESVSIEKFLLWLREQ 251          
BLAST of mRNA_H-canaliculatus_F_contig11009.933.1 vs. uniprot
Match: A9Y5I3_ZYMTI (Cytochrome c oxidase subunit 2 n=9 Tax=cellular organisms TaxID=131567 RepID=A9Y5I3_ZYMTI)

HSP 1 Score: 364 bits (934), Expect = 5.040e-121
Identity = 178/241 (73.86%), Postives = 208/241 (86.31%), Query Frame = 1
Query:   61 LQLDAPTPWGVFFQDSASPQMEGIEELHNNIMFYLAIILFTVT*MIITILRNFLANKSPIAHKFMNHGTLIELI*TISPAFILILIAFPSFKLLYLMDEVMDPSLVVYAEGHQ*Y*SYQYPDFTNSDDEFIEFDSYIVPESDLEQGQFRMLEVDNRVMIPELTHTRIVISAADVIHSYACPSLGIKADAYPGRLNQASVYINRPGVFFGQCSEICGILHSSMPIAIQSVSIKDFLL*LREQ 783
            + LDAP PWGV+FQDSASPQME + ELH+NIMFYL IILF V  ++++I+RN+++ KSPI++K++NHGTLIELI TI+PA ILILIAFPSFKLLYLMDEV DPSL V+ EGHQ Y SYQYPDF N+DDE +EFDSY+VPESDLE+G  RMLEVDNRV++PELTH R +IS+ DVIHSYACPSLGIK DAYPGRLNQ SV INR G FFGQCSEICGILHSSMPI I+S+S++ FL  L EQ
Sbjct:    9 ISLDAPQPWGVYFQDSASPQMEALIELHDNIMFYLVIILFGVAWIMVSIIRNYISTKSPISNKYLNHGTLIELIWTITPALILILIAFPSFKLLYLMDEVTDPSLTVFVEGHQWYWSYQYPDFLNNDDEEVEFDSYLVPESDLEEGALRMLEVDNRVILPELTHVRFIISSGDVIHSYACPSLGIKCDAYPGRLNQISVMINREGSFFGQCSEICGILHSSMPIVIESISLEKFLSWLHEQ 249          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11009.933.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0G3IVY2_PENRO1.050e-20099.65Uncharacterized protein n=1 Tax=Penicillium roquef... [more]
A0A3G5AVQ8_ASPKA1.410e-14987.70Cytochrome c oxidase subunit 2 n=38 Tax=cellular o... [more]
COX2_EMEND3.900e-14486.51Cytochrome c oxidase subunit 2 n=2 Tax=Aspergillus... [more]
M4GGS9_TALMQ1.070e-14383.81Cytochrome c oxidase subunit 2 n=3 Tax=Talaromyces... [more]
C5HA19_TRIRU6.400e-13681.82Cytochrome c oxidase subunit 2 n=7 Tax=Arthroderma... [more]
Q1XA91_PARBD1.930e-13279.03Cytochrome c oxidase subunit 2 n=3 Tax=Paracoccidi... [more]
COX2_TRIRU6.000e-13282.05Cytochrome c oxidase subunit 2 n=3 Tax=Onygenales ... [more]
A0A7G0WZX9_AJEDE9.990e-13076.86Cytochrome c oxidase subunit 2 (Fragment) n=5 Tax=... [more]
A0A286MUM1_9EURO6.350e-12577.31Cytochrome c oxidase subunit 2 n=1 Tax=Mycocaliciu... [more]
A9Y5I3_ZYMTI5.040e-12173.86Cytochrome c oxidase subunit 2 n=9 Tax=cellular or... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig11009contigH-canaliculatus_F_contig11009:1457..3003 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size1547
Cds size330
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928777.2410314-CDS-H-canaliculatus_F_contig11009:1456..17861622928777.2410314-CDS-H-canaliculatus_F_contig11009:1456..1786Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11009 1457..1786 -
1696845559.9759793-CDS-H-canaliculatus_F_contig11009:1456..17861696845559.9759793-CDS-H-canaliculatus_F_contig11009:1456..1786Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11009 1457..1786 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928777.252149-UTR-H-canaliculatus_F_contig11009:1786..30031622928777.252149-UTR-H-canaliculatus_F_contig11009:1786..3003Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig11009 1787..3003 -
1696845559.9869566-UTR-H-canaliculatus_F_contig11009:1786..30031696845559.9869566-UTR-H-canaliculatus_F_contig11009:1786..3003Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig11009 1787..3003 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig11009.933.1prot_H-canaliculatus_F_contig11009.933.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig11009 1457..1786 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig11009.933.1

>prot_H-canaliculatus_F_contig11009.933.1 ID=prot_H-canaliculatus_F_contig11009.933.1|Name=mRNA_H-canaliculatus_F_contig11009.933.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=110bp
MQFKPSELENVRLGDNPSRVFQFCYYSSVEKRMVYPEDFHPGLPILLNHD
RFRVYIDNGISYTYNYRSLDPSQHYCMIEYLDGSKCYLNDASKIAANIEY
HRRPIKDPS*
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mRNA from alignment at H-canaliculatus_F_contig11009:1457..3003-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig11009.933.1 ID=mRNA_H-canaliculatus_F_contig11009.933.1|Name=mRNA_H-canaliculatus_F_contig11009.933.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1547bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11009:1457..3003- (Hapterophycus canaliculatus Oshoro5f female)
AATTATAACTATAATAAAAATAAAAATAAAAAAATGTTTTTATATAATTA TATATCTAAATTACAATTAGATGCTCCAACTCCTTGGGGTGTATTTTTCC AAGATAGTGCTTCACCTCAAATGGAAGGTATTGAAGAGTTACATAATAAT ATTATGTTTTATTTAGCTATTATATTATTTACTGTAACATGAATGATAAT TACAATATTAAGAAATTTTTTAGCCAATAAATCACCTATTGCACATAAAT TTATGAACCATGGTACTTTAATAGAGTTAATTTGAACAATATCACCAGCA TTTATATTAATATTAATAGCATTCCCATCATTTAAATTATTATATTTAAT GGATGAAGTTATGGATCCTTCATTAGTTGTTTATGCTGAAGGTCACCAAT GATATTGAAGTTACCAATATCCTGATTTTACAAATTCAGATGATGAATTT ATAGAATTTGATTCATATATAGTGCCAGAAAGTGATTTAGAACAAGGTCA ATTTAGAATGTTAGAAGTTGATAATAGAGTTATGATACCTGAATTAACTC ACACTAGAATTGTTATATCAGCTGCTGATGTTATACATTCTTATGCTTGC CCTTCTTTAGGTATTAAAGCAGATGCTTACCCAGGTAGATTAAATCAAGC TTCTGTTTACATAAATCGTCCTGGAGTTTTTTTCGGTCAATGTTCAGAAA TTTGTGGAATATTACACAGCAGTATGCCTATAGCTATCCAATCTGTATCT ATAAAAGATTTCTTACTTTGATTAAGAGAACAAATGGACAATTAAATATA CAACAAAAAATGAATATGACGACAATTAAATTAAAAAGATATATACTTAT ATCTCTAACAAAAATATATTTAGATTTAATTATAGATTGTAAAGCAGGTG ATAGATTATATTTTATTTATAGAATAATAATAATAGTATTATTTATATAT ACTTTTATAAATAATAATCCTAGCCTTTTATTAGAATTATTAGATAATCT TAATTATAATTATTTAAACCAATTATATGATGATTCCTTTATAAAGATTA ATAGAGGTAAATTTAGTTATACTTGAAATGAGTTTAATCAAAGATCTAGA GGTTATAATAATGGTTCAGGTGGACCTAATCATAATCCTAATCCATCTTT ATATGAAGTTGAAAATACTAGAAAACGGTTAGAAGAAGAAAATAAACAGT CAGGTGAACCTTCTCGTATGCAATTTAAACCCAGTGAACTTGAAAATGTA CGTTTAGGTGATAATCCATCTAGGGTATTTCAGTTTTGTTACTATAGTTC AGTTGAGAAAAGAATGGTTTATCCTGAAGACTTTCATCCTGGTTTACCTA TATTGTTAAATCATGATAGATTTCGTGTATATATAGATAATGGTATAAGT TATACTTATAATTATAGATCTTTAGACCCATCTCAACATTATTGTATGAT AGAATATCTTGATGGGAGTAAATGTTATCTAAACGATGCATCTAAAATTG CAGCAAATATAGAATATCATAGACGTCCTATTAAAGATCCGTCTTAA
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11009:1457..3003-

>mRNA_H-canaliculatus_F_contig11009.933.1 ID=mRNA_H-canaliculatus_F_contig11009.933.1|Name=mRNA_H-canaliculatus_F_contig11009.933.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=660bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11009:1457..3003- (Hapterophycus canaliculatus Oshoro5f female)
ATGCAATTTAAACCCAGTGAACTTGAAAATGTACGTTTAGGTGATAATCC
ATCTAGGGTATTTCAGTTTTGTTACTATAGTTCAGTTGAGAAAAGAATGG
TTTATCCTGAAGACTTTCATCCTGGTTTACCTATATTGTTAAATCATGAT
AGATTTCGTGTATATATAGATAATGGTATAAGTTATACTTATAATTATAG
ATCTTTAGACCCATCTCAACATTATTGTATGATAGAATATCTTGATGGGA
GTAAATGTTATCTAAACGATGCATCTAAAATTGCAGCAAATATAGAATAT
CATAGACGTCCTATTAAAGATCCGTCTTAAATGCAATTTAAACCCAGTGA
ACTTGAAAATGTACGTTTAGGTGATAATCCATCTAGGGTATTTCAGTTTT
GTTACTATAGTTCAGTTGAGAAAAGAATGGTTTATCCTGAAGACTTTCAT
CCTGGTTTACCTATATTGTTAAATCATGATAGATTTCGTGTATATATAGA
TAATGGTATAAGTTATACTTATAATTATAGATCTTTAGACCCATCTCAAC
ATTATTGTATGATAGAATATCTTGATGGGAGTAAATGTTATCTAAACGAT
GCATCTAAAATTGCAGCAAATATAGAATATCATAGACGTCCTATTAAAGA
TCCGTCTTAA
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