prot_H-canaliculatus_F_contig110.924.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-canaliculatus_F_contig110.924.1
Unique Name	prot_H-canaliculatus_F_contig110.924.1
Type	polypeptide
Organism	Hapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length	452

Homology

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BLAST of mRNA_H-canaliculatus_F_contig110.924.1 vs. uniprot
Match: D8LPW4_ECTSI (Phosphatidate cytidylyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPW4_ECTSI)

HSP 1 Score: 343 bits (879), Expect = 1.350e-111
Identity = 225/391 (57.54%), Postives = 259/391 (66.24%), Query Frame = 0

Query:    1 MGLRERFLTAGVAIPLALWAIFYDAKLCLSLILVLQAICVHELGQLLRRTRAARAIAATGVRVGIIGSPFLLHVIAETVALVTAFGNRDASAAAIVVGMALIVARRIAIMRDHWSASNLAAGKAASAPDFSSDRSSSCRQGELGSGPAAAMKTVTTAVHGPLPACFDAAKIGEDGGXXXXXXXXX-SGVVEAGVFLLALEISAMLWLVGGWSSLVALRFRGSRGAADVVFVFSVVFNSDNGGLLAGSVFKAFGRKWQ-SIGEPGLQDVRSPEGPKSTPAAAA----IGTGVSAPSLLNVASPNKTWVGVTGAIVLGTTTALVLEGVLGGLYPGPFW-QTHRGLPGEQ-KAVFFSLGDLPRAWLGLAGAAVCAVGVLGDLWESLLKRTAMVK 383
            MGLRERFLTA VA+PLALWAIF+DA LCLSL+LVLQA+CV E+G+LLRRTRAARAIAATGV V ++GS FL HVIAETV+L+TAF  RDA+  A+ VGMALIVARR+ +MRDHW AS L+A K                                               +G  GGXXXXXXXXX +GV+EAGVFLLALEISAMLW+V G SSLVALRFRGSRGAADVVF+ +VVFNSDNGGLLAGS++K   RK Q  +    L           TP AAA    +  G   P LL VASP KTWVGVTG+I LGT TAL LE  L  L   P   +    LPGE+ +   FS+G +    LG+ GA +C VGV+GDLWESLLKRTAMVK
Sbjct:    1 MGLRERFLTAAVALPLALWAIFHDAWLCLSLVLVLQAVCVQEVGELLRRTRAARAIAATGVGVALLGSTFLFHVIAETVSLITAFCGRDAAGIAMCVGMALIVARRLVLMRDHWVASKLSAEK----------------------------------------------PVGVSGGXXXXXXXXXXAGVMEAGVFLLALEISAMLWMVCGCSSLVALRFRGSRGAADVVFLLAVVFNSDNGGLLAGSMYKVLRRKRQLHLSSSELLQRHQRSSASQTPPAAAGAAEMTPGQKHPGLLTVASPGKTWVGVTGSIALGTATALTLEQALLFLLHEPLLSRVGESLPGEEERGGVFSVGGMSSGRLGVVGAGLCIVGVVGDLWESLLKRTAMVK 345

The following BLAST results are available for this feature:

BLAST of mRNA_H-canaliculatus_F_contig110.924.1 vs. uniprot

BLAST of mRNA_H-canaliculatus_F_contig110.924.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D8LPW4_ECTSI	1.350e-111	57.54	Phosphatidate cytidylyltransferase n=2 Tax=Ectocar...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF01148	CTP_transf_1	coord: 290..383 e-value: 1.9E-10 score: 41.0
None	No IPR available	PANTHER	PTHR46382	FAMILY NOT NAMED	coord: 197..383
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 249..299
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 414..432
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 59..84
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 109..187
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 403..413
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..6
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 353..372
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 7..23
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 188..207
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 326..352
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 373..383
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 227..248
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 300..325
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 433..451
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 24..28
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 384..402
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 90..108
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 208..226
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 29..47
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 48..58
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 85..89
None	No IPR available	TMHMM	TMhelix		coord: 354..376
None	No IPR available	TMHMM	TMhelix		coord: 58..80
None	No IPR available	TMHMM	TMhelix		coord: 15..37
None	No IPR available	TMHMM	TMhelix		coord: 300..322
None	No IPR available	TMHMM	TMhelix		coord: 229..248
None	No IPR available	TMHMM	TMhelix		coord: 90..109
None	No IPR available	TMHMM	TMhelix		coord: 192..214

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-canaliculatus_F_contig110	contig	H-canaliculatus_F_contig110:22613..25983 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90	2022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-canaliculatus_F_contig110.924.1	mRNA_H-canaliculatus_F_contig110.924.1	Hapterophycus canaliculatus Oshoro5f female	mRNA	H-canaliculatus_F_contig110 22546..26926 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-canaliculatus_F_contig110.924.1 ID=prot_H-canaliculatus_F_contig110.924.1|Name=mRNA_H-canaliculatus_F_contig110.924.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=452bp
MGLRERFLTAGVAIPLALWAIFYDAKLCLSLILVLQAICVHELGQLLRRT
RAARAIAATGVRVGIIGSPFLLHVIAETVALVTAFGNRDASAAAIVVGMA
LIVARRIAIMRDHWSASNLAAGKAASAPDFSSDRSSSCRQGELGSGPAAA
MKTVTTAVHGPLPACFDAAKIGEDGGDGGSGGRGGSGVVEAGVFLLALEI
SAMLWLVGGWSSLVALRFRGSRGAADVVFVFSVVFNSDNGGLLAGSVFKA
FGRKWQSIGEPGLQDVRSPEGPKSTPAAAAIGTGVSAPSLLNVASPNKTW
VGVTGAIVLGTTTALVLEGVLGGLYPGPFWQTHRGLPGEQKAVFFSLGDL
PRAWLGLAGAAVCAVGVLGDLWESLLKRTAMVKVKEFCVWLLSSSACWLI
AVDAVTGGSRETDASTLTSFCACSNWAIIRQLKGRRSLLHFWPQRLPVIR
A*