mRNA_H-canaliculatus_F_contig11.919.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig11.919.1
Unique NamemRNA_H-canaliculatus_F_contig11.919.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig11.919.1 vs. uniprot
Match: A0A6H5JNN8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNN8_9PHAE)

HSP 1 Score: 439 bits (1128), Expect = 1.130e-144
Identity = 333/451 (73.84%), Postives = 351/451 (77.83%), Query Frame = 1
Query:  862 MSLPRPGGNQQG-DSKSGAYGGGTTAAT--------------PSAFVGYNPPSSNPPNPGGNPAGPGGFSLSGAAGSXXXXXXAVGYXXXXXXXXAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALXXXMXAVAGAAMGMGAGGAQXXXXXXXXXXXXXXXXXXXQPLDWHQWTPDGVNAQMLNAGGSVASNFLKSNVAQYQPRVSGFWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWYRLPSEDEVKDDQGRPKFERPVADVNAPDLYVPLMSFITFVLVTGYAKGSAAAQSHGAGTFSPEVLTEVTSSCVVTQLLEVLLVRLGLYLINSPAVVLDLIAYTGYKYVGLCINMTLGIFSGKTAYYLALLWTGSMTSYFMASLPPPPIPSLTPPVHCPCLSTYYVSSPFKTMAHTVPTGSASREIMILG 2169
            MSLPRPGG  QG + KSG                        PSAF GY PPS+NPPNP          S +GA+  XXXXXX    XXXX XXX  XX X  XXXXX  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  L   M AVAGAAMGM AGGAQ   XXXXXXXXXXXXXXX QPLDWHQWTPDG+NAQMLN GG+VASNFLKSNVAQYQPRVSG+WNTLKVYFTVDNRYVLKKLKVLLLSVL+KDW+RLPSEDEVKDD GRPKFERPVADVNAPDLYVPLMSFITFVL+TGYAKGSAAA S GAGTFSPEVLTEVTSSC+VTQLLEVLL+RLGLYL+NSPAVVLDLIAYTGYKYVGLCINMT+G+FSG+T YYLALLWTGSM S+FM                            FKTMAHTVPTGSASRE+MILG
Sbjct:    1 MSLPRPGGRPQGGEIKSGXXXXXXXXXXXXXXXXXXXXXXXXPSAFAGYTPPSANPPNPY--------TSATGASXXXXXXXXXXXXXXXXYXXXXXXXGXAFXXXXXPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTLGASMGAVAGAAMGMAAGGAQRKAXXXXXXXXXXXXXXX-QPLDWHQWTPDGMNAQMLNVGGNVASNFLKSNVAQYQPRVSGYWNTLKVYFTVDNRYVLKKLKVLLLSVLRKDWFRLPSEDEVKDD-GRPKFERPVADVNAPDLYVPLMSFITFVLLTGYAKGSAAALSDGAGTFSPEVLTEVTSSCIVTQLLEVLLIRLGLYLLNSPAVVLDLIAYTGYKYVGLCINMTVGVFSGRTWYYLALLWTGSMMSFFM----------------------------FKTMAHTVPTGSASREVMILG 413          
BLAST of mRNA_H-canaliculatus_F_contig11.919.1 vs. uniprot
Match: D7FLH1_ECTSI (Protein YIF1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLH1_ECTSI)

HSP 1 Score: 430 bits (1105), Expect = 4.030e-143
Identity = 218/264 (82.58%), Postives = 231/264 (87.50%), Query Frame = 1
Query: 1378 QPLDWHQWTPDGVNAQMLNAGGSVASNFLKSNVAQYQPRVSGFWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWYRLPSEDEVKDDQGRPKFERPVADVNAPDLYVPLMSFITFVLVTGYAKGSAAAQSHGAGTFSPEVLTEVTSSCVVTQLLEVLLVRLGLYLINSPAVVLDLIAYTGYKYVGLCINMTLGIFSGKTAYYLALLWTGSMTSYFMASLPPPPIPSLTPPVHCPCLSTYYVSSPFKTMAHTVPTGSASREIMILG 2169
            QPLDWHQWTPDG+NAQMLN GG+VASNFLKSNVAQYQPRVSG+WNTLKVYFTVDNRYVLKKLKVLLLSVLKKDW+RLPSEDEVKDDQGRPKFERPVADVNAPDLYVPLMSFITFVL+TGYAKGSAAA S GAGTFSPEVLTEVTSSC+VTQLLEVLL+RLGLYL+NSPAVVLDL+AYTGYKYVGLCINMT+G+FSGKT YYLALLWTGSM S+FM                            FKTMAHTVPTGSASRE+MILG
Sbjct:   52 QPLDWHQWTPDGMNAQMLNVGGNVASNFLKSNVAQYQPRVSGYWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWFRLPSEDEVKDDQGRPKFERPVADVNAPDLYVPLMSFITFVLLTGYAKGSAAALSDGAGTFSPEVLTEVTSSCIVTQLLEVLLIRLGLYLLNSPAVVLDLVAYTGYKYVGLCINMTVGVFSGKTWYYLALLWTGSMMSFFM----------------------------FKTMAHTVPTGSASREVMILG 287          
BLAST of mRNA_H-canaliculatus_F_contig11.919.1 vs. uniprot
Match: A0A835YSN9_9STRA (Protein YIF1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSN9_9STRA)

HSP 1 Score: 247 bits (630), Expect = 1.940e-73
Identity = 134/250 (53.60%), Postives = 169/250 (67.60%), Query Frame = 1
Query: 1426 MLNAGGSVASNFLKSNVAQYQPRVSGFWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWYRLPSEDE--VKDDQGRPKFERPVADVNAPDLYVPLMSFITFVLVTGYAKGSAAAQSHGAGTFSPEVLTEVTSSCVVTQLLEVLLVRLGLYLINSPAVVLDLIAYTGYKYVGLCINMTLGIFSGKTAYYLALLWTGSMTSYFMASLPPPPIPSLTPPVHCPCLSTYYVSSPFKTMAHTVPTGSASREIMILG 2169
            MLN GG++A +F+ SN+A+YQP VSGFW  LK YF VDN YVL+K KVLLL VLKK W+R+P+E+    +D   + KF RP  D NAPDLY+PLM+FIT  L++G+ KG A+        F+PEVL EVTSS +V QLLEVLLVRLGLYL+ +PA +LDL+A+TGYK+V LCINM +GI  G+T YY+AL++TG MT+YFM                             KTMA  VP G ASR++MI G
Sbjct:    1 MLNMGGTMAKSFISSNMARYQPGVSGFWALLKHYFAVDNAYVLRKFKVLLLPVLKKSWHRVPAEEAGAAQDGSAQFKFARPCVDENAPDLYLPLMAFITHALISGFVKGRAS-------NFTPEVLVEVTSSAMVVQLLEVLLVRLGLYLLGAPAAMLDLVAFTGYKFVALCINMAVGIALGRTGYYVALVYTGLMTAYFM----------------------------LKTMACAVPLGPASRDVMIAG 215          
BLAST of mRNA_H-canaliculatus_F_contig11.919.1 vs. uniprot
Match: W7TGL4_9STRA (Protein YIF1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TGL4_9STRA)

HSP 1 Score: 175 bits (443), Expect = 8.640e-45
Identity = 93/218 (42.66%), Postives = 133/218 (61.01%), Query Frame = 1
Query: 1414 VNAQMLNAGGSVASNFLKSNVAQYQPRVSGFWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWYRLPSEDEVKDDQG----------------RPKFERPVADVNAPDLYVPLMSFITFVLVTGYAKGSAAAQSHGAGTFSPEVLTEVTSSCVVTQLLEVLLVRLGLYLINSPAVVLDLIAYTGYKYVGLCINMTLGIFSGKTAYYLALLWTGSMTSYF 2019
             N+Q  + G  +   +L ++V++Y P V+  W+ LK YF V++ YV +KL  L+    K+ W R   +       G                RP+++ P+ D NAPDLY+PLM+F+T+VLVTGYAKG+         +F+PEVL EVTSSC+V QLLE+ ++RLGLYL+ +PA +LDL+A TGYKYV L  NM LG+  G   Y  A+++TG   +YF
Sbjct:  105 ANSQAFSMGVGMGQEYLNASVSRYTPWVTSVWHGLKYYFAVNHHYVKRKLFTLVFPYRKRHWRRQMKDSGAAGSSGAYGQQGGNADSASAMYRPQYQVPMLDENAPDLYIPLMAFVTYVLVTGYAKGTK-------NSFTPEVLVEVTSSCLVMQLLEIAVIRLGLYLLQAPATLLDLLAVTGYKYVALNFNMVLGLNLGPRVYLAAMVYTGLAMAYF 315          
BLAST of mRNA_H-canaliculatus_F_contig11.919.1 vs. uniprot
Match: A0A7S2LHT7_9STRA (Protein YIF1 n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LHT7_9STRA)

HSP 1 Score: 167 bits (423), Expect = 2.770e-42
Identity = 101/272 (37.13%), Postives = 139/272 (51.10%), Query Frame = 1
Query: 1378 QPLDWHQWTPDGVNAQM-----LNAGGSVASNFLKSNVAQYQPRVSGFWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWYRLPSEDEVKDDQGRPKFERPVADVNAPDLYVPLMSFITFVLVTGYAKGSAAAQSHGAGTFSPEVLTEVTSSCVVTQLLEVLLVRLGLYLINSPAVVLDLIAYTGYKYVGLCINMTLGIFSGKTAYYLALLWTGSMTSYFMASLPPPPIPSLTPPVHCPCLSTYYVSSPFKTMAHTVP----TGSASREIMIL 2166
            QP     W P  +N+ M     +N        FL +  A+  P +     TL+ YF VDN YVL K++ +L   LKKDW RL +E       G  K+  P  D NAPDLY+P MS +T+VL+     GS        G F+PE L E+T+ C VTQ+LEVL +RLG Y++  P  +LD+  +TGYKY+GLC+NM +G+F G   YY  + WT S T++FM                             +TMA+ VP    T    RE+M++
Sbjct:  110 QPEQPQLWNPANINSMMKNDMVMNMAYDGGKAFLANGAARMIPGLELLMVTLRYYFAVDNSYVLHKMQRVLFPFLKKDWKRLEAEGH-----GNVKYALPRFDENAPDLYIPFMSLVTYVLLCALLFGSK-------GQFTPEALPEITTRCFVTQILEVLAIRLGHYVMQVPCSLLDMFCFTGYKYMGLCVNMLVGLFFGYWPYYGTMTWTASATAFFM----------------------------LRTMANNVPRITATNGPKREVMVM 341          
BLAST of mRNA_H-canaliculatus_F_contig11.919.1 vs. uniprot
Match: A0A7R9Z3B1_9STRA (Protein YIF1 n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z3B1_9STRA)

HSP 1 Score: 160 bits (405), Expect = 6.250e-41
Identity = 103/260 (39.62%), Postives = 136/260 (52.31%), Query Frame = 1
Query: 1417 NAQMLNAGGSVASNFLKSNVAQYQPRVSGFWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWYRLPSEDEVKDDQGRPKFERPVADVNAPDLYVPLMSFITFVLVTGYAKGSAAAQSHGAGTFSPEVLTEVTSSCVVTQLLEVLLVRLGLYLINSPAVVLDLIAYTGYKYVGLCINMTLGIFSGKTA-----YYLALLWTGSMTSYFMASLPPPPIPSLTPPVHCPCLSTYYVSSPFKTMAHTVPTGSAS----REIMILG 2169
            N  ML+ G  V S+FL    A+  P +  F  TL+VYF VDNRYV +K++ +L   L KDW RL  ED+         +  PV D NA DLY+P M+ IT+VL+     G+A       G F+PEVL +VT+ C  TQ+LEV+ VR G Y + +P  +LDL + TGYKY+GL INM +G+  G        YY   LWT S  SYFM                             KTMA+ +P  +A+    RE M+LG
Sbjct:   20 NDAMLDGGAKVVSHFLDQGTARLVPGLDLFMRTLRVYFAVDNRYVKRKMQRVLFPFLYKDWARL--EDDASSTATSIAYAPPVQDENAFDLYIPSMALITYVLLCALCYGTA-------GEFNPEVLPDVTTKCFATQILEVIAVRGGYYAMQAPCSLLDLFSATGYKYLGLSINMLVGLLLGHLGWGHRGYYGTFLWTASAASYFM----------------------------LKTMANNIPRMTAATGPKREFMVLG 242          
BLAST of mRNA_H-canaliculatus_F_contig11.919.1 vs. uniprot
Match: A0A7S2UL83_9STRA (Protein YIF1 n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UL83_9STRA)

HSP 1 Score: 160 bits (404), Expect = 1.580e-39
Identity = 93/219 (42.47%), Postives = 123/219 (56.16%), Query Frame = 1
Query: 1417 NAQMLNAGGSVASNFLKSNVAQYQPRVSGFWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWYRLPSEDEVKDDQGRPKFERPVADVNAPDLYVPLMSFITFVLVTGYAKGSAAAQSHGAGTFSPEVLTEVTSSCVVTQLLEVLLVRLGLYLINSPAVVLDLIAYTGYKYVGLCINMTLGIF-----SGKTAYYLALLWTGSMTSYFMASLPPPPIPSLT 2058
            N  ++    S  SN + S  AQ  P +    NTL+ YF VDNRYV KK+  +L   L K W R+ +E      Q R  FE P+ D NAPDLY+P M+ IT+VL+     GSA       G F PEV+ +V + C  TQ++EVL++R GL+ + +P  +LDL +YTGYKY+GLCINM  G+       G   YY   LWT S  S+FM       IP +T
Sbjct:  129 NDALMKMAESAGSNMMTSGWAQMVPGMDRAMNTLRFYFAVDNRYVKKKIIRILFPFLSKQWKRMEAEPTGPQMQSR--FELPIVDDNAPDLYLPCMTLITYVLLCALCYGSA-------GKFDPEVIPDVCTKCFFTQVMEVLVMRAGLWAMQAPIPMLDLFSYTGYKYLGLCINMLAGLALLHFGKGVAGYYGTFLWTASAASFFMLKTMANNIPRIT 338          
BLAST of mRNA_H-canaliculatus_F_contig11.919.1 vs. uniprot
Match: B7GAF9_PHATC (Protein YIF1 n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GAF9_PHATC)

HSP 1 Score: 159 bits (402), Expect = 2.520e-39
Identity = 98/260 (37.69%), Postives = 136/260 (52.31%), Query Frame = 1
Query: 1417 NAQMLNAGGSVASNFLKSNVAQYQPRVSGFWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWYRLPSEDEVKDDQGRPKFERPVADVNAPDLYVPLMSFITFVLVTGYAKGSAAAQSHGAGTFSPEVLTEVTSSCVVTQLLEVLLVRLGLYLINSPAVVLDLIAYTGYKYVGLCINMTLGIFSGKT------AYYLALLWTGSMTSYFMASLPPPPIPSLTPPVHCPCLSTYYVSSPFKTMAHTVPTGSAS----REIMIL 2166
            N  ML+   S   +FL+S  A+  P +     TL+ YF VDN+YVL+K++ +L   L K W R   E    D   +  ++ P  D NAPDLYVP+MS IT+VL+     G A       G F+PEVL +VT+ C +TQ+LEVL +R G Y +  P   LDL AYTGYKY+GL +NM + +  G        AYY+ L WT S  ++FM                             KTMAH +P+ +A+    REI+++
Sbjct:  129 NDTMLDLASSAGKSFLQSGSARMIPGLESTMLTLRHYFAVDNKYVLRKMQKVLFPFLSKQWQRQEREPGTPDTPAQ--YDLPYLDENAPDLYVPVMSLITYVLLCAVCYGKA-------GQFNPEVLPDVTTKCFMTQVLEVLAIRFGFYTMQVPVPFLDLFAYTGYKYLGLALNMLVALVLGTVFALGTRAYYVTLFWTASAMAFFM----------------------------LKTMAHNIPSRTAATGPKREIVVI 351          
BLAST of mRNA_H-canaliculatus_F_contig11.919.1 vs. uniprot
Match: A0A7S1TS60_9STRA (Protein YIF1 n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TS60_9STRA)

HSP 1 Score: 154 bits (390), Expect = 1.040e-38
Identity = 84/203 (41.38%), Postives = 117/203 (57.64%), Query Frame = 1
Query: 1411 GVNAQMLNAGGSVASNFLKSNVAQYQPRVSGFWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWYRLPSEDEVKDDQGRPKFERPVADVNAPDLYVPLMSFITFVLVTGYAKGSAAAQSHGAGTFSPEVLTEVTSSCVVTQLLEVLLVRLGLYLINSPAVVLDLIAYTGYKYVGLCINMTLGIFSGKTAYYLALLWTGSMTSYF 2019
            G +  M+N G + A  F    +    P  + F+ +LK YF+V+N YVL+KL +L++   KK W R  S+D         KF RP+ D NAPDLY+PLM+ +TFVLVTG+ KG+        G FSP+VL  V +SC VT +L +L++  GL+        LDL AYTGYKY  LC+   + +  G   YY+ALL+  +   YF
Sbjct:   42 GFDPGMVNMGANAAGQFFNGQMQNVSPAAATFYRSLKYYFSVNNSYVLRKLGILIMPWNKKRWARETSDDG----DVNKKFARPLHDENAPDLYIPLMALVTFVLVTGFVKGTG-------GEFSPDVLQNVLTSCAVTDVLLMLIMYGGLFFTQLSVPTLDLYAYTGYKYFALCVVTLVSLILGSLGYYVALLYMAAALGYF 233          
BLAST of mRNA_H-canaliculatus_F_contig11.919.1 vs. uniprot
Match: G4YM91_PHYSP (Protein YIF1 n=2 Tax=Phytophthora TaxID=4783 RepID=G4YM91_PHYSP)

HSP 1 Score: 155 bits (393), Expect = 6.410e-38
Identity = 85/210 (40.48%), Postives = 128/210 (60.95%), Query Frame = 1
Query: 1405 PDGVNAQMLNAGGSVASN----FLKSNVAQYQPRVSGFWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWYRLPSEDEVKDDQGRP-KFERPVADVNAPDLYVPLMSFITFVLVTGYAKGSAAAQSHGAGTFSPEVLTEVTSSCVVTQLLEVLLVRLGLYLINSPAVVLDLIAYTGYKYVGLCINMTLGIFSGKTAYYLALLWTGSMTSYF 2019
            PD +N    N    +A N    FL+     Y P   G W +LK YFTV+N YV  +LK+LLL    K+W R+ + ++   D+ +P ++  P  D NAPDLY+PLM F+T++L+ GY+KG++         FSP+V+T+  S C+V QL+E+ ++   LY++NS    LDL++++GYKY+ L IN  +    G  AYY++LL+TG   SYF
Sbjct:  144 PDFINQFSSNPMAGLAMNSAQDFLQKQSEMYLPGAYGVWGSLKYYFTVNNSYVKSRLKILLLPFRHKNWRRMGNGEQ---DESKPMQYAPPTRDCNAPDLYIPLMGFLTYILIVGYSKGTS-------NQFSPDVITKDASYCLVMQLIEIGVLAACLYVLNSSISFLDLVSFSGYKYIPLVINTVVFQLLGSIAYYVSLLYTGVAVSYF 343          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11.919.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JNN8_9PHAE1.130e-14473.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLH1_ECTSI4.030e-14382.58Protein YIF1 n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A835YSN9_9STRA1.940e-7353.60Protein YIF1 n=1 Tax=Tribonema minus TaxID=303371 ... [more]
W7TGL4_9STRA8.640e-4542.66Protein YIF1 n=2 Tax=Monodopsidaceae TaxID=425072 ... [more]
A0A7S2LHT7_9STRA2.770e-4237.13Protein YIF1 n=1 Tax=Leptocylindrus danicus TaxID=... [more]
A0A7R9Z3B1_9STRA6.250e-4139.62Protein YIF1 n=1 Tax=Pseudictyota dubia TaxID=2749... [more]
A0A7S2UL83_9STRA1.580e-3942.47Protein YIF1 n=2 Tax=Attheya septentrionalis TaxID... [more]
B7GAF9_PHATC2.520e-3937.69Protein YIF1 n=3 Tax=Phaeodactylum tricornutum Tax... [more]
A0A7S1TS60_9STRA1.040e-3841.38Protein YIF1 n=2 Tax=Phaeomonas parva TaxID=124430... [more]
G4YM91_PHYSP6.410e-3840.48Protein YIF1 n=2 Tax=Phytophthora TaxID=4783 RepID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig11contigH-canaliculatus_F_contig11:70718..75367 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score432.6
Seed ortholog evalue2.2e-118
Seed eggNOG ortholog2880.D7FLH1
Preferred nameYIF1B
KEGG koko:K08023,ko:K20362
GOsGO:0000139,GO:0000902,GO:0002790,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005793,GO:0005794,GO:0005798,GO:0006810,GO:0006886,GO:0006888,GO:0006950,GO:0006986,GO:0007154,GO:0007165,GO:0008104,GO:0008150,GO:0009306,GO:0009653,GO:0009987,GO:0010033,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016192,GO:0023052,GO:0030134,GO:0030135,GO:0030173,GO:0030968,GO:0031090,GO:0031224,GO:0031228,GO:0031300,GO:0031301,GO:0031410,GO:0031982,GO:0031984,GO:0032502,GO:0032940,GO:0032989,GO:0033036,GO:0033554,GO:0034613,GO:0034620,GO:0034976,GO:0035966,GO:0035967,GO:0036498,GO:0042175,GO:0042221,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046903,GO:0046907,GO:0048193,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051716,GO:0065007,GO:0070727,GO:0070887,GO:0071310,GO:0071702,GO:0071705,GO:0071840,GO:0097708,GO:0098588,GO:0098791,GO:0098827
EggNOG free text desc.ER to Golgi vesicle-mediated transport
EggNOG OGsCOG5197@1,KOG3094@2759
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Hectar predicted targeting categoryother localisation
Exons7
Model size2172
Cds size1311
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig11.919.1prot_H-canaliculatus_F_contig11.919.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig11 71579..75367 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928773.6513085-UTR-H-canaliculatus_F_contig11:70717..715781622928773.6513085-UTR-H-canaliculatus_F_contig11:70717..71578Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig11 70718..71578 +
1696845558.6692705-UTR-H-canaliculatus_F_contig11:70717..715781696845558.6692705-UTR-H-canaliculatus_F_contig11:70717..71578Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig11 70718..71578 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928773.6703312-CDS-H-canaliculatus_F_contig11:71578..721421622928773.6703312-CDS-H-canaliculatus_F_contig11:71578..72142Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11 71579..72142 +
1696845558.680298-CDS-H-canaliculatus_F_contig11:71578..721421696845558.680298-CDS-H-canaliculatus_F_contig11:71578..72142Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11 71579..72142 +
1622928773.6867664-CDS-H-canaliculatus_F_contig11:72419..725271622928773.6867664-CDS-H-canaliculatus_F_contig11:72419..72527Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11 72420..72527 +
1696845558.6900733-CDS-H-canaliculatus_F_contig11:72419..725271696845558.6900733-CDS-H-canaliculatus_F_contig11:72419..72527Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11 72420..72527 +
1622928773.7024815-CDS-H-canaliculatus_F_contig11:73091..731931622928773.7024815-CDS-H-canaliculatus_F_contig11:73091..73193Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11 73092..73193 +
1696845558.6989434-CDS-H-canaliculatus_F_contig11:73091..731931696845558.6989434-CDS-H-canaliculatus_F_contig11:73091..73193Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11 73092..73193 +
1622928773.725878-CDS-H-canaliculatus_F_contig11:73787..739431622928773.725878-CDS-H-canaliculatus_F_contig11:73787..73943Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11 73788..73943 +
1696845558.708574-CDS-H-canaliculatus_F_contig11:73787..739431696845558.708574-CDS-H-canaliculatus_F_contig11:73787..73943Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11 73788..73943 +
1622928773.7418725-CDS-H-canaliculatus_F_contig11:74202..743301622928773.7418725-CDS-H-canaliculatus_F_contig11:74202..74330Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11 74203..74330 +
1696845558.7182896-CDS-H-canaliculatus_F_contig11:74202..743301696845558.7182896-CDS-H-canaliculatus_F_contig11:74202..74330Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11 74203..74330 +
1622928773.759668-CDS-H-canaliculatus_F_contig11:74811..749141622928773.759668-CDS-H-canaliculatus_F_contig11:74811..74914Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11 74812..74914 +
1696845558.7279599-CDS-H-canaliculatus_F_contig11:74811..749141696845558.7279599-CDS-H-canaliculatus_F_contig11:74811..74914Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11 74812..74914 +
1622928773.77439-CDS-H-canaliculatus_F_contig11:75217..753671622928773.77439-CDS-H-canaliculatus_F_contig11:75217..75367Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11 75218..75367 +
1696845558.738354-CDS-H-canaliculatus_F_contig11:75217..753671696845558.738354-CDS-H-canaliculatus_F_contig11:75217..75367Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11 75218..75367 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig11.919.1

>prot_H-canaliculatus_F_contig11.919.1 ID=prot_H-canaliculatus_F_contig11.919.1|Name=mRNA_H-canaliculatus_F_contig11.919.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=437bp
MSLPRPGGNQQGDSKSGAYGGGTTAATPSAFVGYNPPSSNPPNPGGNPAG
PGGFSLSGAAGSGGGGGGAVGYGGSGGYGGAFGGAGFGGAPQGFGSGGGA
GAGGALGGGVGGDGRNQYGFSNGGGGGGGMDALGASMGAVAGAAMGMGAG
GAQQRGGGAGGGGLGGQQQQQQQPLDWHQWTPDGVNAQMLNAGGSVASNF
LKSNVAQYQPRVSGFWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWYRLP
SEDEVKDDQGRPKFERPVADVNAPDLYVPLMSFITFVLVTGYAKGSAAAQ
SHGAGTFSPEVLTEVTSSCVVTQLLEVLLVRLGLYLINSPAVVLDLIAYT
GYKYVGLCINMTLGIFSGKTAYYLALLWTGSMTSYFMASLPPPPIPSLTP
PVHCPCLSTYYVSSPFKTMAHTVPTGSASREIMILG*
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mRNA from alignment at H-canaliculatus_F_contig11:70718..75367+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig11.919.1 ID=mRNA_H-canaliculatus_F_contig11.919.1|Name=mRNA_H-canaliculatus_F_contig11.919.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=4650bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11:70718..75367+ (Hapterophycus canaliculatus Oshoro5f female)
GCAGTTGCAGCCAAATTTCAGAGCTTGCTCTTGACGCCACAGGACTGCCT GTACTGCGAACGAATCCATCCGCGCTCGACACAATCAGGTGAGGCATGTC AACTAGAATTTGTTTTTTCTCTCCAAAAGCCGTTCTGTACAGTAACGTTT CCCTCTCGCAGCAGCAGAGCGTCATTCCGCAGGTGGTGAAGGACGATCGT GTTTTATCCATTGAGCCTATAGTATCCAACGATTGCATGCCGCGCGGCAT GGCATGTAAATAATCGAGCGGTGTCTCATCTGCTGTTGTGATGCTCCTGG GGGACATCTACAACTACACCTTGTAGGGGGTTTCTACCGCGGTACAGAGT CACGCCGCACCCAGCATTCTTGCCGAGAGACTAGAGTAACGACTGAAGGA GGGCGTTCTGCTGTTGCTATCTGATAGTGCGCTCCACAGCTAGAGTCTTG CTGTGGAGTGCGCATAGGTCCAAGCGTTGGGTGAGGTGCTGCCCACTTGC AAGGAATGCTCTTGTCAGGTCTCCTTTCGCCCACTTTTGAGTTCTATCAC GAGTCTCGGACATCCTTCCCTCCGGCTATCTTCCCGTGTCATAAACCCTG AGTAATTTGTTCTCACTTCTTCGGTCTTTCCGCATTGTACACCTTCACCA GCTGGGTCGGTGAGCGGCATGGCTCGACCGTCGTTGTTTTGCGCATGCCA TCGCTCGAGGACTGAAAACCTCGAAACAACCGAACCGCACTCAAGGAGAG ACCCACCCCTCACGCCCGATCACAGCCGCAGAGTCAACCCCACGGCAGAC TCGACAACAACTCACCAATCGCACACCAGATCTGGGAAGCCTTCGCCTCG CAAGGAAAAAGATGAGCCTCCCGCGACCTGGTGGGAATCAGCAAGGAGAC AGCAAATCCGGCGCGTACGGCGGCGGCACGACCGCAGCCACCCCGAGTGC TTTCGTTGGATACAACCCGCCTTCCTCCAACCCTCCAAACCCGGGTGGCA ACCCGGCGGGGCCGGGCGGGTTTTCCCTGAGCGGAGCTGCAGGTAGCGGC GGCGGTGGTGGTGGCGCGGTGGGGTACGGCGGGAGTGGGGGATACGGGGG TGCGTTTGGCGGTGCCGGGTTTGGTGGCGCACCTCAAGGGTTCGGGAGCG GGGGAGGGGCAGGAGCGGGTGGAGCGCTGGGAGGAGGTGTGGGGGGCGAT GGCAGGAACCAGTACGGTTTTTCTAACGGGGGTGGTGGCGGTGGGGGGAT GGATGCGCTTGGTGCGAGCATGGGTGCCGTTGCTGGGGCTGCGATGGGGA TGGGAGCGGGAGGAGCGCAGCAAAGAGGGGGTGGGGCGGGTGGAGGCGGG CTCGGAGGGCAGCAGCAGCAGCAACAGCAGCCCTTGGACTGGCATCAGTG GACCCCGGATGGAGTGAACGCACAAGTAGGTTCAGCGGATGGAAGGTTGG TTTGATCTTCGCTTATTGCTGCCTGGCTCGATTGAGTGTCTATGGGGAAA GAGGCGTTCCGATCCGAACGCGGACACCTTCATCAGGGTCAGGGCTAAGC AGTTGAATGCAATATCTGCGAGACCAGGCAGAGCTCCCGCGGAACAGCGC CCCTCATTACCCGCATTGATCGAGAGTAAGTCCAAAGCCGGGTCCCAAAC AGTTTGTCGTCCATCGGGACCTGACCAGAATCTGTCATCCCCGCCTTCGC AGATGCTGAACGCTGGTGGGAGCGTCGCGTCGAACTTCCTGAAGAGCAAC GTCGCGCAATACCAGCCCCGGGTTTCCGGGTTTTGGAACACGCTCAAGGT TTACTTCACGGTGAGAGGAAACTATCGCCACAACTTATCTAGCACGCCCT GTGTCGAGGAGAAGCGGAGAAGCGGGAATTCCGGCTGGTTTTGAGCAACC CACATACTTGTACACACCGGGTCGGTATGTGCAGAAGAGGCTGGAGCAGG GTTTGTGAGCTTGTGTCTGCGCGAGAGGTTGCTCATAGCGAGGGCAATGC GCAATTTCGACAGTGTGCCTTAAATGGTCGTTGTGCCTTTCAAGGGTAGA AGAGTAAAGCCGGAGCCTTCAAATTTTGGTCACCTTTCGAGCGCGACTGC TGCCGTTGCCGCTACTCAGCAGTGTTGCAGAAATCGTATTTCGAGAGGAT ATGGCTGGTGCATTTTTTCTGCTCCTCTTGCTCCGGGCCATGGAGCTATA ATATGCATTTTCGTTGCTCTTCTTCTGGTATGGTCGTTCGACTTTTGTAC CAAACGCCCGTCGGCGTCGTGGTTCCTCGCCCCTTGTCCGTGTATTTCTT GCGGCTTTGTTGGTTCTGCGCTCACATATAATGTCGATGTTCGTTGACCT CCTTCGCCGGACGTGCGACAAAAGGTGGACAACCGATACGTGCTAAAAAA GCTCAAGGTGCTGCTGTTGTCAGTCCTGAAGAAGGACTGGTACCGGTTAC CGTCCGAGGACGAGGTCAAGGACGACGTGAGTGAAGCTAAGAAAGATGCC GCAAAGGGTTTCTCGCCGCAGAAAGACACCCGCAATGGTAGTGCAAGGAT AGTACCAACATAATCAACAGATCCGACCTTGCATGAAGGCGGCTGCGTTC GTGCGGCTGGCGGTACTGCACCAGCCACCTTGAAGAAGTTGCGGGGTTTC ATGTGCTCTGGATGCCCGGCGGACGAAATATCGCAGCGACACACGGTTTC TGCACAAGATGGCTGCACTAGATGGTTTCGCTCGAGATCTCTCCGGGTTT TCATCGGAACCTCGTTTTGACCTGCGGTTCGTCCCTGAACTCTTGTTTGT TCCCGGGCGAGTAACCTACCGTGCCACACGTGCACACGTCAAGACAGATC GGGCGCGAACGGCGCCGCATAGTTCATTCATCCCCACCGACAGCAGCAAC GACGGCTTTTCGCTTTTGGGGTGCACGTCACCAGCGCGACAACAAACCGT GTTCGGCGAACCACCTGATGAGTGATGGGTGGGTGATGGGTGGCATTGCT TGCTGATATTTCCGCCTATCGCGCCGCGGCCGGCACCCCAAACTACCGCG CGGATGTTTCTGTTTCGCAGCAGGGAAGACCGAAGTTCGAGCGGCCCGTG GCAGACGTGAACGCCCCCGACCTGTACGTGCCTCTGATGTCCTTCATCAC GTTTGTCCTCGTCACCGGCTACGCCAAGGGATCGGCGGCGGCGCAGTCAC ACGGGGCAGGCACGTTCTCTCCCGAGGTGAGCAAGCAGCGGTGGGCGTTT TGAGGAAATGCGTGGGCTCGGGTCGGGGCGAGTGGTGAGTCTCGAAAGGA GCTCGCGTGCGTGTGCAGATGCTGTTCGAGCTGCAGGGTACGAAGCATCG AGATACGATTTTTCGTTTTTCCATTGTCCCCTTTCTGAGTTGTTCGTTGT TACGAAGTGTTGAGTGGAAGCGAATGCACATTTACGCTCCCTGCGCTGCC ATATCCATGCGCGTGTGGATCCCTTCTTCTCTCAGGTCTTGACAGAGGTT ACGAGCTCTTGCGTGGTGACGCAGCTGTTGGAGGTGCTCCTGGTCCGATT AGGGCTGTACCTGATCAACAGCCCCGCTGTCGTTCTCGATCTTATCGCGT ACACCGGCTACAAGTGAGAGTCGAATGAATCTGAGAACATTCTGCATTGC TGGCGGATGTCTCAGATGTGGCACTGGTTGTGCGGCACAACGGGGTCACG AATGAAAGCAGCATCTGTCGAACACGCACTATTGGTCTCCTGTAGCGAGC AAGTCTGCTCTGCGCAGTGTTATGGCAGACAGAACTTGAACTGTCTTGTG TGGAACAGGGAACAGGTTGTCCACATGGTGATCGTTCTTCAGGCAGGTAT TGCGGAAGGGTATAAACTACACAGGCTTTTCGAAACTCAGCGAGAGGGCA CTAGTCGCCGCGTCGATTGTGCCGCGCCTTGTTGGTTTCTGAGAACGTTT CACAGACGTATCACCACTGCCTTGGCAACGAGGAGAGATAACGAGCGCTC AAGACAAAAGGAAAGGGTGCGTAAGTCGGTGCTTGCTTTTCCACCTGCTA ATCTTGTACACTGTCGCCTTTTCGTGGCCGCCCTCCACACGCAGATACGT CGGGTTATGTATCAACATGACGCTTGGCATTTTTTCGGGGAAAACGGCGT ACTATCTAGCGCTACTGTGGACAGGATCGATGACGTCTTACTTTATGGTG AGCTTGCTCGGTAGAGTAATCGCGTGGCGGTAGTTCCTGCGTTCAGGCAG ACTGGCCGGGCGGAATCCCGGTTTGGCAGTCTTGAGCGTTGCTGTCGTTG ATCTCGGAGTAGGCACACGCATAAAATGCATTCGGAAGGCACTTTCGATT GCTTGTAGACACTCTTTTGACAACGAGTTCCGGCCGAGGGGATGGCTACT GTGGGTACCCTGTACTTTTGACCCCCACGCCGCTAGTTCTTTGCGGACTG CGGACATTTCCATCTGTCATGAGACCAAACTAACCTGAGGTGCAGGAAAG GCTTCGCTTCCCCCCCCCCCAATCCCCTCACTCACCCCTCCCGTTCATTG CCCTTGCCTCTCTACATATTACGTTTCGTCCCCGTTTAAAACGATGGCTC ACACGGTCCCCACCGGATCCGCATCCCGAGAAATCATGATTTTAGGGTGA
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11:70718..75367+

>mRNA_H-canaliculatus_F_contig11.919.1 ID=mRNA_H-canaliculatus_F_contig11.919.1|Name=mRNA_H-canaliculatus_F_contig11.919.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2622bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11:70718..75367+ (Hapterophycus canaliculatus Oshoro5f female)
ATGAGCCTCCCGCGACCTGGTGGGAATCAGCAAGGAGACAGCAAATCCGG
CGCGTACGGCGGCGGCACGACCGCAGCCACCCCGAGTGCTTTCGTTGGAT
ACAACCCGCCTTCCTCCAACCCTCCAAACCCGGGTGGCAACCCGGCGGGG
CCGGGCGGGTTTTCCCTGAGCGGAGCTGCAGGTAGCGGCGGCGGTGGTGG
TGGCGCGGTGGGGTACGGCGGGAGTGGGGGATACGGGGGTGCGTTTGGCG
GTGCCGGGTTTGGTGGCGCACCTCAAGGGTTCGGGAGCGGGGGAGGGGCA
GGAGCGGGTGGAGCGCTGGGAGGAGGTGTGGGGGGCGATGGCAGGAACCA
GTACGGTTTTTCTAACGGGGGTGGTGGCGGTGGGGGGATGGATGCGCTTG
GTGCGAGCATGGGTGCCGTTGCTGGGGCTGCGATGGGGATGGGAGCGGGA
GGAGCGCAGCAAAGAGGGGGTGGGGCGGGTGGAGGCGGGCTCGGAGGGCA
GCAGCAGCAGCAACAGCAGCCCTTGGACTGGCATCAGTGGACCCCGGATG
GAGTGAACGCACAAATGAGCCTCCCGCGACCTGGTGGGAATCAGCAAGGA
GACAGCAAATCCGGCGCGTACGGCGGCGGCACGACCGCAGCCACCCCGAG
TGCTTTCGTTGGATACAACCCGCCTTCCTCCAACCCTCCAAACCCGGGTG
GCAACCCGGCGGGGCCGGGCGGGTTTTCCCTGAGCGGAGCTGCAGGTAGC
GGCGGCGGTGGTGGTGGCGCGGTGGGGTACGGCGGGAGTGGGGGATACGG
GGGTGCGTTTGGCGGTGCCGGGTTTGGTGGCGCACCTCAAGGGTTCGGGA
GCGGGGGAGGGGCAGGAGCGGGTGGAGCGCTGGGAGGAGGTGTGGGGGGC
GATGGCAGGAACCAGTACGGTTTTTCTAACGGGGGTGGTGGCGGTGGGGG
GATGGATGCGCTTGGTGCGAGCATGGGTGCCGTTGCTGGGGCTGCGATGG
GGATGGGAGCGGGAGGAGCGCAGCAAAGAGGGGGTGGGGCGGGTGGAGGC
GGGCTCGGAGGGCAGCAGCAGCAGCAACAGCAGCCCTTGGACTGGCATCA
GTGGACCCCGGATGGAGTGAACGCACAAATGCTGAACGCTGGTGGGAGCG
TCGCGTCGAACTTCCTGAAGAGCAACGTCGCGCAATACCAGCCCCGGGTT
TCCGGGTTTTGGAACACGCTCAAGGTTTACTTCACGATGCTGAACGCTGG
TGGGAGCGTCGCGTCGAACTTCCTGAAGAGCAACGTCGCGCAATACCAGC
CCCGGGTTTCCGGGTTTTGGAACACGCTCAAGGTTTACTTCACGGTGGAC
AACCGATACGTGCTAAAAAAGCTCAAGGTGCTGCTGTTGTCAGTCCTGAA
GAAGGACTGGTACCGGTTACCGTCCGAGGACGAGGTCAAGGACGACGTGG
ACAACCGATACGTGCTAAAAAAGCTCAAGGTGCTGCTGTTGTCAGTCCTG
AAGAAGGACTGGTACCGGTTACCGTCCGAGGACGAGGTCAAGGACGACCA
GGGAAGACCGAAGTTCGAGCGGCCCGTGGCAGACGTGAACGCCCCCGACC
TGTACGTGCCTCTGATGTCCTTCATCACGTTTGTCCTCGTCACCGGCTAC
GCCAAGGGATCGGCGGCGGCGCAGTCACACGGGGCAGGCACGTTCTCTCC
CGAGCAGGGAAGACCGAAGTTCGAGCGGCCCGTGGCAGACGTGAACGCCC
CCGACCTGTACGTGCCTCTGATGTCCTTCATCACGTTTGTCCTCGTCACC
GGCTACGCCAAGGGATCGGCGGCGGCGCAGTCACACGGGGCAGGCACGTT
CTCTCCCGAGGTCTTGACAGAGGTTACGAGCTCTTGCGTGGTGACGCAGC
TGTTGGAGGTGCTCCTGGTCCGATTAGGGCTGTACCTGATCAACAGCCCC
GCTGTCGTTCTCGATCTTATCGCGTACACCGGCTACAAGTCTTGACAGAG
GTTACGAGCTCTTGCGTGGTGACGCAGCTGTTGGAGGTGCTCCTGGTCCG
ATTAGGGCTGTACCTGATCAACAGCCCCGCTGTCGTTCTCGATCTTATCG
CGTACACCGGCTACAAATACGTCGGGTTATGTATCAACATGACGCTTGGC
ATTTTTTCGGGGAAAACGGCGTACTATCTAGCGCTACTGTGGACAGGATC
GATGACGTCTTACTTTATGATACGTCGGGTTATGTATCAACATGACGCTT
GGCATTTTTTCGGGGAAAACGGCGTACTATCTAGCGCTACTGTGGACAGG
ATCGATGACGTCTTACTTTATGGCTTCGCTTCCCCCCCCCCCAATCCCCT
CACTCACCCCTCCCGTTCATTGCCCTTGCCTCTCTACATATTACGTTTCG
TCCCCGTTTAAAACGATGGCTCACACGGTCCCCACCGGATCCGCATCCCG
AGAAATCATGATTTTAGGGTGAGCTTCGCTTCCCCCCCCCCCAATCCCCT
CACTCACCCCTCCCGTTCATTGCCCTTGCCTCTCTACATATTACGTTTCG
TCCCCGTTTAAAACGATGGCTCACACGGTCCCCACCGGATCCGCATCCCG
AGAAATCATGATTTTAGGGTGA
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