mRNA_H-canaliculatus_F_contig10975.894.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig10975.894.1 vs. uniprot
Match: A0A6H5KVN5_9PHAE (HIT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KVN5_9PHAE) HSP 1 Score: 240 bits (612), Expect = 1.110e-77 Identity = 149/198 (75.25%), Postives = 165/198 (83.33%), Query Frame = 1 Query: 1 RAVATASLVRVISARSFSWVAGGDLAFAVAKRSAPVPSPGVSRTHPSSRTSTSNSISPGSRIATVLRHMSASPGEEEKXXXXXXXXXXXXDDGGAETIFDKIISKAIPADIIHEDDLCLAFKDISPQAPVHFLVIPKSRDGLTQLSKAVDSNKALLGHLMFVAQQVAKEQGLDEGFRVVVNDGAQGCQTVYHLHLHVI 594 RA+ATAS +RV S RSF+ V G DLAF V KR+ P S + R S +S+S I+P SRIATV+R+MS++PG XXXXXXXXXXXX A TIFDKIISK IPADIIHED+LCLAFKDISPQAPVHFLVIPKSRDGLTQLSKAV+SNKALLGHLMFVAQ+VAKEQGLDEGFRVVVNDG QGCQTVYHLH+HVI Sbjct: 3 RAIATASFIRVASLRSFA-VVGSDLAFGVVKRAPPPSSAWIGRA--SCTSSSSCRITPRSRIATVIRNMSSNPGXXXXXXXXXXXXXXXXXXXEA-TIFDKIISKEIPADIIHEDELCLAFKDISPQAPVHFLVIPKSRDGLTQLSKAVESNKALLGHLMFVAQKVAKEQGLDEGFRVVVNDGVQGCQTVYHLHIHVI 196
BLAST of mRNA_H-canaliculatus_F_contig10975.894.1 vs. uniprot
Match: A0A7S1SQN7_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SQN7_9CHLO) HSP 1 Score: 165 bits (417), Expect = 3.420e-49 Identity = 73/102 (71.57%), Postives = 93/102 (91.18%), Query Frame = 1 Query: 289 TIFDKIISKAIPADIIHEDDLCLAFKDISPQAPVHFLVIPKSRDGLTQLSKAVDSNKALLGHLMFVAQQVAKEQGLDEGFRVVVNDGAQGCQTVYHLHLHVI 594 TIFDKI++K IPAD+I+EDDLCLAF+D++PQAP HFLVIPK+R GLTQLSKAV+++K LLGHL++VAQ VAK++GL EGFR+V+NDG GCQ+VYHLH+H + Sbjct: 15 TIFDKIVAKEIPADVIYEDDLCLAFRDVNPQAPTHFLVIPKARSGLTQLSKAVEAHKGLLGHLIYVAQDVAKKEGLGEGFRLVINDGPNGCQSVYHLHIHCL 116
BLAST of mRNA_H-canaliculatus_F_contig10975.894.1 vs. uniprot
Match: A0A388K5I6_CHABU (HIT domain-containing protein n=2 Tax=Chara braunii TaxID=69332 RepID=A0A388K5I6_CHABU) HSP 1 Score: 167 bits (424), Expect = 5.130e-49 Identity = 77/107 (71.96%), Postives = 93/107 (86.92%), Query Frame = 1 Query: 274 DGGAETIFDKIISKAIPADIIHEDDLCLAFKDISPQAPVHFLVIPKSRDGLTQLSKAVDSNKALLGHLMFVAQQVAKEQGLDEGFRVVVNDGAQGCQTVYHLHLHVI 594 D GA TIFDKI+ K IP ++EDD CLAFKDISPQAPVH ++IPK RDGLTQLSKA + +K +LGHL++VAQ VAK+QGLDEGFR+V+NDGAQGCQ+VYHLH+H+I Sbjct: 102 DTGAPTIFDKIVKKEIPCTSVYEDDKCLAFKDISPQAPVHIVLIPKERDGLTQLSKAEERHKDILGHLLYVAQLVAKQQGLDEGFRIVINDGAQGCQSVYHLHIHII 208
BLAST of mRNA_H-canaliculatus_F_contig10975.894.1 vs. uniprot
Match: A0A836C9C8_9STRA (14 kDa zinc-binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9C8_9STRA) HSP 1 Score: 164 bits (415), Expect = 9.140e-49 Identity = 77/104 (74.04%), Postives = 90/104 (86.54%), Query Frame = 1 Query: 283 AETIFDKIISKAIPADIIHEDDLCLAFKDISPQAPVHFLVIPKSRDGLTQLSKAVDSNKALLGHLMFVAQQVAKEQGLDEGFRVVVNDGAQGCQTVYHLHLHVI 594 A T+FDKI K IP+DII+EDD CLAF DISPQAPVHFLVIPK R+G++QLS A + NK LLGHLM+VAQ VAK+QGL+ GFRVVVNDG +GCQ+VYHLHLHV+ Sbjct: 22 AVTLFDKIAQKQIPSDIIYEDDKCLAFNDISPQAPVHFLVIPKDREGMSQLSTATEDNKPLLGHLMYVAQLVAKQQGLERGFRVVVNDGKEGCQSVYHLHLHVV 125
BLAST of mRNA_H-canaliculatus_F_contig10975.894.1 vs. uniprot
Match: A0A5B8MF15_9CHLO (Histidine triad family protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MF15_9CHLO) HSP 1 Score: 164 bits (415), Expect = 9.140e-49 Identity = 76/107 (71.03%), Postives = 93/107 (86.92%), Query Frame = 1 Query: 274 DGGAETIFDKIISKAIPADIIHEDDLCLAFKDISPQAPVHFLVIPKSRDGLTQLSKAVDSNKALLGHLMFVAQQVAKEQGLDEGFRVVVNDGAQGCQTVYHLHLHVI 594 D TIFDK+ISK IPAD+I+EDD CLAF+DI+PQAPVHFLVIPK+RDGLT+LSKA + +K +LGHL++ AQ+VAK++GL EGFRV +NDG GCQ+VYHLHLHVI Sbjct: 19 DNEGPTIFDKVISKEIPADVIYEDDKCLAFRDINPQAPVHFLVIPKARDGLTRLSKAHEGHKDILGHLLYTAQKVAKDEGLGEGFRVAINDGPGGCQSVYHLHLHVI 125
BLAST of mRNA_H-canaliculatus_F_contig10975.894.1 vs. uniprot
Match: A0A061SGY2_9CHLO (Histidine triad (HIT) family protein (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SGY2_9CHLO) HSP 1 Score: 164 bits (416), Expect = 2.970e-48 Identity = 78/107 (72.90%), Postives = 93/107 (86.92%), Query Frame = 1 Query: 274 DGGAETIFDKIISKAIPADIIHEDDLCLAFKDISPQAPVHFLVIPKSRDGLTQLSKAVDSNKALLGHLMFVAQQVAKEQGLDEGFRVVVNDGAQGCQTVYHLHLHVI 594 D G TIFDKIISK IPAD+I+EDD CLAF+DI+PQAP HFLVIPK R+GL++LS A D++K LLGHLMFVAQ+VAK++ L EGFRVV+NDG GCQ+VYHLHLHV+ Sbjct: 68 DKGGPTIFDKIISKEIPADVIYEDDQCLAFRDINPQAPTHFLVIPKVRNGLSRLSNASDAHKPLLGHLMFVAQEVAKQEKLAEGFRVVINDGPNGCQSVYHLHLHVL 174
BLAST of mRNA_H-canaliculatus_F_contig10975.894.1 vs. uniprot
Match: A0A7S0MYZ0_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0MYZ0_9CHLO) HSP 1 Score: 162 bits (410), Expect = 4.400e-47 Identity = 74/107 (69.16%), Postives = 92/107 (85.98%), Query Frame = 1 Query: 274 DGGAETIFDKIISKAIPADIIHEDDLCLAFKDISPQAPVHFLVIPKSRDGLTQLSKAVDSNKALLGHLMFVAQQVAKEQGLDEGFRVVVNDGAQGCQTVYHLHLHVI 594 D G TIFDKII+K IPA +++EDDLCLAF+D++PQAPVH LVIPK R GLTQLSKAV +KALLGHLM+ AQ+VAK + LD GFR+V+NDG +GCQ+VYHLH+H++ Sbjct: 88 DSGDPTIFDKIIAKEIPATVVYEDDLCLAFRDVNPQAPVHILVIPKVRAGLTQLSKAVPEHKALLGHLMYTAQEVAKSEKLDAGFRLVINDGPEGCQSVYHLHIHIL 194
BLAST of mRNA_H-canaliculatus_F_contig10975.894.1 vs. uniprot
Match: A0A8J6C1F3_DIALT (HIT domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C1F3_DIALT) HSP 1 Score: 159 bits (402), Expect = 5.020e-47 Identity = 73/102 (71.57%), Postives = 89/102 (87.25%), Query Frame = 1 Query: 289 TIFDKIISKAIPADIIHEDDLCLAFKDISPQAPVHFLVIPKSRDGLTQLSKAVDSNKALLGHLMFVAQQVAKEQGLDEGFRVVVNDGAQGCQTVYHLHLHVI 594 TIFDKI+SK IP+D+++ED+LCLAF+DI+PQAPVH LVIPK +DGL+QLSKA +K LLGHL+FVAQ VAK +GL EGFR+V+NDG GCQ VYHLHLHV+ Sbjct: 7 TIFDKILSKEIPSDVVYEDELCLAFRDIAPQAPVHVLVIPKRKDGLSQLSKADARHKELLGHLLFVAQHVAKSEGLAEGFRIVINDGKHGCQAVYHLHLHVL 108
BLAST of mRNA_H-canaliculatus_F_contig10975.894.1 vs. uniprot
Match: C1MY73_MICPC (Predicted protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1MY73_MICPC) HSP 1 Score: 159 bits (402), Expect = 5.510e-47 Identity = 73/108 (67.59%), Postives = 93/108 (86.11%), Query Frame = 1 Query: 271 DDGGAETIFDKIISKAIPADIIHEDDLCLAFKDISPQAPVHFLVIPKSRDGLTQLSKAVDSNKALLGHLMFVAQQVAKEQGLDEGFRVVVNDGAQGCQTVYHLHLHVI 594 ++ G TIFDKI++K IPA +I+ED+LCLAF+D++PQA HFLVIPK R GLT+LS A + +KALLGHL+F AQ+VAK++GL EGFRVV+NDG QGCQ+VYHLHLHV+ Sbjct: 2 ENSGEPTIFDKIVAKEIPATVIYEDNLCLAFRDVAPQAKTHFLVIPKIRAGLTRLSNAEEEHKALLGHLLFTAQRVAKDEGLGEGFRVVINDGVQGCQSVYHLHLHVL 109
BLAST of mRNA_H-canaliculatus_F_contig10975.894.1 vs. uniprot
Match: C1EDE2_MICCC (HIT domain-containing protein n=2 Tax=cellular organisms TaxID=131567 RepID=C1EDE2_MICCC) HSP 1 Score: 159 bits (401), Expect = 7.580e-47 Identity = 72/105 (68.57%), Postives = 92/105 (87.62%), Query Frame = 1 Query: 280 GAETIFDKIISKAIPADIIHEDDLCLAFKDISPQAPVHFLVIPKSRDGLTQLSKAVDSNKALLGHLMFVAQQVAKEQGLDEGFRVVVNDGAQGCQTVYHLHLHVI 594 G TIFDKII+K IP+D+I+ED+LCLAF+DI+PQA HFLVIPK R GLTQLSKA + +K LLGHL++ AQ+VAK++ LD+GFRVV+NDG +GCQ+VYHLH+HV+ Sbjct: 5 GEPTIFDKIIAKEIPSDVIYEDNLCLAFRDIAPQAKTHFLVIPKIRSGLTQLSKAEEGHKELLGHLLYTAQKVAKQEKLDKGFRVVINDGVEGCQSVYHLHIHVV 109 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10975.894.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10975.894.1 >prot_H-canaliculatus_F_contig10975.894.1 ID=prot_H-canaliculatus_F_contig10975.894.1|Name=mRNA_H-canaliculatus_F_contig10975.894.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=198bp RAVATASLVRVISARSFSWVAGGDLAFAVAKRSAPVPSPGVSRTHPSSRTback to top mRNA from alignment at H-canaliculatus_F_contig10975:77..1916- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig10975.894.1 ID=mRNA_H-canaliculatus_F_contig10975.894.1|Name=mRNA_H-canaliculatus_F_contig10975.894.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1840bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10975:77..1916- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10975:77..1916- >mRNA_H-canaliculatus_F_contig10975.894.1 ID=mRNA_H-canaliculatus_F_contig10975.894.1|Name=mRNA_H-canaliculatus_F_contig10975.894.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1188bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10975:77..1916- (Hapterophycus canaliculatus Oshoro5f female)back to top |