mRNA_H-canaliculatus_F_contig10053.89.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig10053.89.1
Unique NamemRNA_H-canaliculatus_F_contig10053.89.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
[Close]
BLAST of mRNA_H-canaliculatus_F_contig10053.89.1 vs. uniprot
Match: D8LCJ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCJ8_ECTSI)

HSP 1 Score: 358 bits (919), Expect = 1.690e-121
Identity = 167/213 (78.40%), Postives = 187/213 (87.79%), Query Frame = 1 
Query:   28 DAACATSEFLCDLVAFLHDDVGLPTETLLRRLGFRVMRPGLPVGLDDIKDYVTRERVKKGGCCGVAEMMKFFAYTLTDYHRVVHLDTDTIILQPLDDLLDEGESLLYTADINMSNGKTPVMPVQGGFLVIRPDPRVFEDLVQIVKDTPFYPNRGWGRSEIGLFWGGITVQGLLPYYYERRAPPEVTYRAVDRCVYNNMVDRPDCQATDLSRVR 666
            DAAC TSEFLCDLVAFLHD++GL TE LLRRLGFRVMRPGLP+ LD+I+D VTR R+ KGGCCG+AE+MK FAYTLT+YHRVVHLDTDTI+LQPLD LLD  ESLLYTADINM +  TPVMPVQGGFLV+RPDP VF+DLVQIVK T FYP++GWG S IGLFWGG+ VQG+LPYYYERRAP  V YR+VDR VYNNMVDRP CQA D+S+VR
Sbjct:   87 DAACETSEFLCDLVAFLHDEIGLGTENLLRRLGFRVMRPGLPLSLDEIEDPVTRGRIAKGGCCGLAELMKLFAYTLTEYHRVVHLDTDTIVLQPLDALLDAEESLLYTADINMGSSYTPVMPVQGGFLVVRPDPEVFQDLVQIVKRTSFYPSKGWGGSMIGLFWGGVNVQGILPYYYERRAPAGVLYRSVDRSVYNNMVDRPSCQAVDISQVR 299
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BLAST of mRNA_H-canaliculatus_F_contig10053.89.1 vs. uniprot
Match: A0A6H5JYN4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYN4_9PHAE)

HSP 1 Score: 353 bits (905), Expect = 3.390e-118
Identity = 163/213 (76.53%), Postives = 184/213 (86.38%), Query Frame = 1 
Query:   28 DAACATSEFLCDLVAFLHDDVGLPTETLLRRLGFRVMRPGLPVGLDDIKDYVTRERVKKGGCCGVAEMMKFFAYTLTDYHRVVHLDTDTIILQPLDDLLDEGESLLYTADINMSNGKTPVMPVQGGFLVIRPDPRVFEDLVQIVKDTPFYPNRGWGRSEIGLFWGGITVQGLLPYYYERRAPPEVTYRAVDRCVYNNMVDRPDCQATDLSRVR 666
            DAAC TSEFLCDLVAFLHD++ L TE LLRRLGFRVMRPGLP+ LD+I+D VTR R+ KGGCCG AE+MK FAYTLT+YHRVVHLDTDTI+LQPLD LLD  ESLLYT D+NM N  TPVMPVQGGFLV+RPDP VF+DLVQ+VK TPFYP++GW  S IGLFWGG+ VQG+LPYYYERRAP  V+YR+VDR VYNNMVDRP CQA D+S+ R
Sbjct:  145 DAACETSEFLCDLVAFLHDEIELGTENLLRRLGFRVMRPGLPLNLDEIEDPVTRARIAKGGCCGPAELMKLFAYTLTEYHRVVHLDTDTIVLQPLDALLDAEESLLYTPDVNMGNSYTPVMPVQGGFLVVRPDPEVFQDLVQVVKRTPFYPSKGWAGSMIGLFWGGVNVQGILPYYYERRAPAGVSYRSVDRSVYNNMVDRPSCQAVDISQER 357
[Close]
BLAST of mRNA_H-canaliculatus_F_contig10053.89.1 vs. uniprot
Match: W7U427_9STRA (Glycosyl transferase, family 8 (Fragment) n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U427_9STRA)

HSP 1 Score: 189 bits (481), Expect = 1.410e-56
Identity = 92/206 (44.66%), Postives = 133/206 (64.56%), Query Frame = 1 
Query:   40 ATSEFLCDLVAFLHDDVGLPTETLLRRLGFRVMRPGLPVGLDDIKDYVTRERVKKGGCCGVAEMMKFFAYTLTDYHRVVHLDTDTIILQPLDDLLD-EGESLLYTADINMSNGKTPVMPVQGGFLVIRPDPRVFEDLVQIVKDTPFYPNRGWGRSEIGLFWGGITVQGLLPYYYERRAPPEVTYRAVDRCVYNNMVDRPDCQATDL 654
            ATS++  D +A +H +V   +   LRR G++V+   +PV + DI+    RE + K GCCG  E++K +A+TLTDYHRVVHLD D+++LQP+D+L D E ++ +YT D  M+N +     VQGGFL++RP+   FE LV  VK   F    GWG   IG  +GG+T+QGLLPYY+   + PE++ + +D C YN M D+P C+   L
Sbjct:    1 ATSKYGVDFIAIVHPNV-TTSRAALRRSGWKVIERDIPVDITDIQGTFLREHIAKSGCCGATELLKLYAWTLTDYHRVVHLDMDSMLLQPMDELFDKEDKTFMYTCDYGMTNERLKACMVQGGFLLLRPNVTEFERLVDTVKIGDFRQGSGWGGKGIGWGYGGMTIQGLLPYYFLSLSDPELSLQ-LDHCKYNTMFDQPQCKNASL 204
[Close]
BLAST of mRNA_H-canaliculatus_F_contig10053.89.1 vs. uniprot
Match: A0A7R9U0G1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U0G1_9STRA)

HSP 1 Score: 184 bits (467), Expect = 1.170e-52
Identity = 87/204 (42.65%), Postives = 130/204 (63.73%), Query Frame = 1 
Query:   79 HDDVGLPTETL--------LRRLGFRVMRPGLPVGLDDIKDYVTRERVKKGGCCGVAEMMKFFAYTLTDYHRVVHLDTDTIILQPLDDLLDEGESLLYTADINMSNGKTPVMPVQGGFLVIRPDPRVFEDLVQIVKDTPFYPNRGWGRSEIGLFWGGITVQGLLPYYYERRAPPEVTYRAVDRCVYNNMVDRPDCQATDLSRVR 666
            H  V L TE +        L +LGFR+++   P+ ++DI+    R ++   GCCG+ E++K +++TLT++  VVHLDTD+++ Q +D+L    ES+LYT+D  M+ GK  V PVQGGF V+RP   VF  +V +V+   F   RGWG   +G F+GG+T+QGLLPY+Y   AP E +   +DRC+YNNMV+ P C+A     ++
Sbjct:  220 HHFVALVTEEVFEGKSAATLAKLGFRLVKKSAPLRVEDIEGEFLRSKIADDGCCGIDELIKLYSFTLTEFDHVVHLDTDSMVAQNMDELWGHEESMLYTSDYGMAKGKPSVPPVQGGFFVVRPSLTVFSAMVDVVRKGHF-TQRGWGDKRVGRFYGGMTIQGLLPYFYAFLAPEEASAE-LDRCIYNNMVENPRCKAIPTEEIK 421
[Close]
BLAST of mRNA_H-canaliculatus_F_contig10053.89.1 vs. uniprot
Match: R1CNT5_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CNT5_EMIHU)

HSP 1 Score: 176 bits (446), Expect = 2.020e-50
Identity = 90/198 (45.45%), Postives = 121/198 (61.11%), Query Frame = 1 
Query:   52 FLCDLVAFLHDDVGLPTETLLRRLGFRVMRPGLPVGLDDIKDYVTRERVKKGGCCGVAEMMKFFAYTLTDYHRVVHLDTDTIILQP--LDDLLDEGES-LLYTADINMSNGKTPVMPVQGGFLVIRPDPRVFEDLVQIVKDTPFYPNRGWGRSEIGLFWGGITVQGLLPYYYERRAPPE-VTYRAVDRCVYNNMVDRP 633
            ++  LVA  H  V   T   L  +GFRV+    PV + +I+    R+R+ + GCCG  E+MK +A++L +Y RV+ LDTD+I+L+P  L  LL      L YT D  M        P+QGGFL++RP P V  +L++IV++  F P  GWG S IG FWGG+TVQGLLPYYY  RA    V+   +DRCV+NNM D P
Sbjct:   68 YVSSLVALTHPTVSNATRAALALVGFRVLERPTPVAIPEIRGSFLRQRIVRSGCCGATELMKLWAWSLVEYDRVLLLDTDSIVLRPIPLGILLRMAPGDLAYTYDYGMGKRGLRTPPIQGGFLLVRPSPSVLAELLEIVREGDFRPGSGWGGSNIGHFWGGVTVQGLLPYYYTVRADRRRVSGMELDRCVFNNMADNP 265
[Close]
BLAST of mRNA_H-canaliculatus_F_contig10053.89.1 vs. uniprot
Match: A0A836C6W8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6W8_9STRA)

HSP 1 Score: 175 bits (443), Expect = 4.180e-50
Identity = 99/216 (45.83%), Postives = 137/216 (63.43%), Query Frame = 1 
Query:   28 DAACATSEFLCDLVAFLHDDVGLPTETLLRRLGFRVMRPGLPVGLDDIKDYVTRERVKK--GGCCGVAEMMKFFAYTLTDYH------RVVHLDTDTIILQPLDDLLDEGESLLYTADINMSNGKTPVMPVQGGFLVIRPDPRVFEDLVQIVKDTPFYPNRGWGRSEIGLFWGGITVQGLLPYYYERRAPPEVTYRAVDRCVYNNMVDRPDCQATD 651
            D +CA S++ C  VA L  +V +   +LL   G+RV+  GLP+ LD IK  + RER+K    GCCG  E++K +A+TLT+YH      RV+H+D D ++LQPLD+ + +   L+YT D  M++ K   MPVQGGFL++RP   +F+ LV+IV+   F  + GW +S IG FWGG T+QGLL YYY R   PE  + A D CV NNM+   DC+  D
Sbjct:   60 DLSCAHSDYQCKFVALLDPEVPVQRRSLLTAHGWRVLERGLPLDLDTIKTDL-RERLKTTTAGCCGAKELIKLWAFTLTEYHSADSNNRVIHVDIDAMVLQPLDEWIAKDVDLVYTEDAPMASNKHN-MPVQGGFLLLRPSLEIFQTLVEIVRKGDFTGD-GWNKSGIGWFWGGDTIQGLLAYYY-RAVKPERAFIA-DPCVVNNMLI-DDCRTRD 269
[Close]
BLAST of mRNA_H-canaliculatus_F_contig10053.89.1 vs. uniprot
Match: A0A7S0SWJ4_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SWJ4_9STRA)

HSP 1 Score: 173 bits (439), Expect = 1.570e-49
Identity = 84/196 (42.86%), Postives = 126/196 (64.29%), Query Frame = 1 
Query:   46 SEFLCDLVAFLHDDVGLPTETLLRRLGFRVMRPGLPVGLDDIKDYVTRERVKKGGCCGVAEMMKFFAYTLTDYHRVVHLDTDTIILQPLDDLLDEGESLLYTADINMSNGKTPVMPVQGGFLVIRPDPRVFEDLVQIVKDTPFYPNRGWGRSEIGLFWGGITVQGLLPYYYERRAPPEVTYRAVDRCVYNNMVDRP 633
            S++  +L+AF+  +V   +  +L+  G++V+   LPV LD+I++    +R+K  GCCG  E +K +A+TLT+YHRVVHLD D+++LQ +D+L D  + +LYT D  M  G +PV P QGGFLV+RP    F    +I++      + GWG + IG FWGG T+QG++PYYY   +  +     ++RCVYN MVD P
Sbjct:   34 SKYDAELIAFVVSNVQT-SRPILQAYGWKVIEKKLPVELDEIENKKYADRMKDSGCCGADEFLKLWAFTLTEYHRVVHLDMDSVVLQNMDELYDIDKEMLYTGDYGMK-GDSPVPPAQGGFLVVRPSLTTFSKFQEIIRKGDHSSSSGWGNTHIGNFWGGTTIQGIIPYYYY--SIDQNNSYELNRCVYNCMVDNP 225
[Close]
BLAST of mRNA_H-canaliculatus_F_contig10053.89.1 vs. uniprot
Match: A0A7S3NFL9_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NFL9_9STRA)

HSP 1 Score: 176 bits (447), Expect = 1.770e-49
Identity = 87/205 (42.44%), Postives = 127/205 (61.95%), Query Frame = 1 
Query:   46 SEFLCDLVAFLHDDVGLPTETLLRRLGFRVMRPGLPVGLDDIKDYVTRERVKKGGCCGVAEMMKFFAYTLTDYHRVVHLDTDTIILQPLDDLLDE----GESL--LYTADINMSN---GKTPVMPVQGGFLVIRPDPRVFEDLVQIVKDTPFYPNRGWGRSEIGLFWGGITVQGLLPYYYERRAPPEVTYRAVDRCVYNNMVDRP 633
            S++   L+AF+   +   T T L   G+RV+   LP+ + DI+    R R++K GCCG  E++K +A+TLT+YHRVVH+D D +ILQPLD+L D+    G  +  +YT D  M+    G  P  P QGGF++ +PD  VF  LV +V+   F   +GWG + +G +WGG+T+QGL+PY++E+  P      AVD C+YNNM   P
Sbjct:  103 SKYGVALIAFVSPAISKKTRTALEACGYRVLERDLPLRIADIQGEYLRNRIEKNGCCGAWELLKLYAWTLTEYHRVVHVDMDVLILQPLDELYDDLKIWGPQVRAVYTYDWTMARPPWGTNP--PTQGGFIIAKPDIEVFNSLVDVVRKGDFQGGKGWGGTGVGAYWGGMTIQGLVPYFFEKLRPGSGF--AVDECIYNNMATNP 303
[Close]
BLAST of mRNA_H-canaliculatus_F_contig10053.89.1 vs. uniprot
Match: A0A482SAB1_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SAB1_9ARCH)

HSP 1 Score: 174 bits (442), Expect = 2.480e-49
Identity = 92/205 (44.88%), Postives = 125/205 (60.98%), Query Frame = 1 
Query:   19 HHPDAACATSEFLCDLVAFLHDDVGLPTETLLRRLGFRVMRPGLPVGLDDIKDYVTRERVKKGGCCGVAEMMKFFAYTLTDYHRVVHLDTDTIILQPLDDLLDEGESLLYTADINMSNGKTPVMPVQGGFLVIRPDPRVFEDLVQIVKDTPFYPNRGWGRSEIGLFWGGITVQGLLPYYYERRAPPEVTYRAVDRCVYNNMVDRP 633
            +H  A    S+F  DL+AF+   V   T T+LR+ G++++   LPV L +I++    +R+K  GCCG  E +K +AYTLT Y RV+HLD D II + LD L+   + LLYT D NM  G +PV P QGGFLVIRP    F++   I++     P +GWG S IG FWGG T+QG++PY+Y            ++RC YNNMVD P
Sbjct:   83 YHSAAKGFPSDFNIDLIAFVTKKVKT-TRTVLRKFGWKILEKDLPVALSEIQNKDYADRMKDSGCCGADEFLKLWAYTLTQYERVIHLDMDCIIFKNLDKLVRIDKELLYTGDYNMKGG-SPVAPAQGGFLVIRPSLERFKEFQAIIRKGDHGP-QGWGGSHIGNFWGGQTIQGIMPYFYH--VIHNGDGEELNRCEYNNMVDNP 282
[Close]
BLAST of mRNA_H-canaliculatus_F_contig10053.89.1 vs. uniprot
Match: A0A835Z761_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z761_9STRA)

HSP 1 Score: 172 bits (437), Expect = 8.070e-48
Identity = 92/243 (37.86%), Postives = 132/243 (54.32%), Query Frame = 1 
Query:   28 DAACATSEFLCDLVAFLHDDVGLPTETLLRRLGFRVMRPGLPVGLDDIKDYVTRERVKKGGCCGVAEMMKFFAYTLTDYHRVVHLDTDTIILQPLDDLLDEGESLLYTADINMSNGKTPVMPVQGGFLVIRPDPRVFEDLVQIVKDTPFYPNRGWGRSEIGLFWGGITVQGLLPYYYE-------RRAPPEVTYRA------------------------VDRCVYNNMVDRPDCQATDLSRV 663
            D+ C  S++ C  VAF+   V       L  LG+RV+  G+P+ +  I+    R R+ K GCCG +E++K +A++LT+Y+RV+HLD D ++LQP+D+L+     L+YT D+ M+      MPVQGGFL+ RP    F++LV IVK   + PN GW RS IG F GG T+QGLL YYY        R  PP +                             DRC +N+M D P+C++  +  V
Sbjct:  110 DSVCRRSKYDCAKVAFVDPSVRAERRGPLSALGWRVLERGVPLDIAQIEGEKLRNRIDKSGCCGASELIKLWAFSLTEYYRVLHLDVDALMLQPVDELIARDVELVYTTDVKMAPNAHN-MPVQGGFLLCRPSQATFDELVGIVKKGDWAPNVGWARSGIGFFHGGPTIQGLLAYYYRHDRTLPNRALPPPLLLSPPXXPLQXXXXXXXRFLKPTELSYEADRCAFNHMWDTPECRSYAIGDV 351
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10053.89.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCJ8_ECTSI1.690e-12178.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JYN4_9PHAE3.390e-11876.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7U427_9STRA1.410e-5644.66Glycosyl transferase, family 8 (Fragment) n=3 Tax=... [more]
A0A7R9U0G1_9STRA1.170e-5242.65Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
R1CNT5_EMIHU2.020e-5045.45Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
A0A836C6W8_9STRA4.180e-5045.83Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0SWJ4_9STRA1.570e-4942.86Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A7S3NFL9_9STRA1.770e-4942.44Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A482SAB1_9ARCH2.480e-4944.88Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A835Z761_9STRA8.070e-4837.86Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10053contigH-canaliculatus_F_contig10053:142..4657 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score359.4
Seed ortholog evalue1.2e-96
Seed eggNOG ortholog2880.D8LCJ8
EggNOG OGs2B6VE@1,2S0N3@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionNucleotide-diphospho-sugar transferases
Ec32 orthologEc-03_002640.1
Exons5
Model size666
Cds size666
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10053.89.1prot_H-canaliculatus_F_contig10053.89.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig10053 142..4657 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928633.8117242-CDS-H-canaliculatus_F_contig10053:141..3211622928633.8117242-CDS-H-canaliculatus_F_contig10053:141..321Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10053 142..321 +
1696845504.993337-CDS-H-canaliculatus_F_contig10053:141..3211696845504.993337-CDS-H-canaliculatus_F_contig10053:141..321Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10053 142..321 +
1622928633.8221502-CDS-H-canaliculatus_F_contig10053:938..10551622928633.8221502-CDS-H-canaliculatus_F_contig10053:938..1055Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10053 939..1055 +
1696845505.0152998-CDS-H-canaliculatus_F_contig10053:938..10551696845505.0152998-CDS-H-canaliculatus_F_contig10053:938..1055Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10053 939..1055 +
1622928633.8332243-CDS-H-canaliculatus_F_contig10053:1402..15581622928633.8332243-CDS-H-canaliculatus_F_contig10053:1402..1558Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10053 1403..1558 +
1696845505.0331113-CDS-H-canaliculatus_F_contig10053:1402..15581696845505.0331113-CDS-H-canaliculatus_F_contig10053:1402..1558Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10053 1403..1558 +
1622928633.842738-CDS-H-canaliculatus_F_contig10053:3737..38451622928633.842738-CDS-H-canaliculatus_F_contig10053:3737..3845Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10053 3738..3845 +
1696845505.0505567-CDS-H-canaliculatus_F_contig10053:3737..38451696845505.0505567-CDS-H-canaliculatus_F_contig10053:3737..3845Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10053 3738..3845 +
1622928633.859547-CDS-H-canaliculatus_F_contig10053:4552..46571622928633.859547-CDS-H-canaliculatus_F_contig10053:4552..4657Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10053 4553..4657 +
1696845505.0589669-CDS-H-canaliculatus_F_contig10053:4552..46571696845505.0589669-CDS-H-canaliculatus_F_contig10053:4552..4657Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10053 4553..4657 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig10053.89.1

>prot_H-canaliculatus_F_contig10053.89.1 ID=prot_H-canaliculatus_F_contig10053.89.1|Name=mRNA_H-canaliculatus_F_contig10053.89.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=222bp
MATRGSHHPDAACATSEFLCDLVAFLHDDVGLPTETLLRRLGFRVMRPGL
PVGLDDIKDYVTRERVKKGGCCGVAEMMKFFAYTLTDYHRVVHLDTDTII
LQPLDDLLDEGESLLYTADINMSNGKTPVMPVQGGFLVIRPDPRVFEDLV
QIVKDTPFYPNRGWGRSEIGLFWGGITVQGLLPYYYERRAPPEVTYRAVD
RCVYNNMVDRPDCQATDLSRVR
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mRNA from alignment at H-canaliculatus_F_contig10053:142..4657+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig10053.89.1 ID=mRNA_H-canaliculatus_F_contig10053.89.1|Name=mRNA_H-canaliculatus_F_contig10053.89.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=4516bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10053:142..4657+ (Hapterophycus canaliculatus Oshoro5f female)
ATGGCAACACGCGGGTCCCATCACCCAGACGCGGCGTGCGCGACGTCGGA
GTTCCTGTGCGACCTGGTGGCGTTCTTGCACGACGACGTCGGCCTACCGA
CAGAAACGCTGCTGCGGCGCCTGGGGTTCCGGGTGATGCGGCCAGGCCTC
CCAGTGGGCCTCGACGACATCAAGGACTACGTGAGACTCCGGTGTGAGAA
TCCAAGCGACGCGACCCCGGTTGTGGAGACCGGCAGCTTTCGTCCGGGGC
ACAGGCCGCCCTTTCGCCTCTTGCCTGGTCCATGCCGCTTGTTTATTCGT
ACGTGCGAGTGGGCCTTGCGCGCTCGTCGCCGCGCTCATGGAGCGTGCGG
TGCGCGTGATACGGCGCGGTACCATTGGCGTCATTTGTTCTCCCCGCGAG
AGGCTCGGAACCGATCCGCCGTCCAAGCTTTGTGGCTTTCCGAGTCTCTG
CAGAGAGGACTGGGTTGATGCAGCCTATCCAAGAGGCGCAAATTTGATGG
GATGCCCGTCCGTTCCGCACCGTTCATCCACCAGAGATGATCCTGGTAAT
TGTTTGCAGGGGGTCGATCGTCACGTGGTGGCGTCCGTACATGCTTGTCG
CAACAACTCAAGGGTATCGGATCGAGCCTGTGAAGAGATCGATTGCGGCA
GGGAGGGCAGGAAGACGCCTCCGCAGAGTTCCAGCCGCCACTCCAAGCAA
TGCACACGGCCATGTTCTCCGAAGCCTGGACGAGGAACAACGTCCGTCTG
CTGCCGAACACGCACGCCATGCTTCGGTCCGTGCTCGCCGAAAACAGGTG
ACCCGGGAGAGAGTGAAGAAGGGCGGCTGCTGCGGTGTCGCGGAGATGAT
GAAGTTCTTCGCCTACACCCTCACGGACTACCACCGCGTCGTGCACCTCG
ACACCGACACCATCGTGAGAACACGCCTGCTTTCATTTCCCAGATAGCTA
AAAAAAACGTCCCCCCGTTCGTTCCCCGCCGCGCGTTGGCTGCGCTTCGC
AGGCAGCGTGCGTGGGTACGTTCGGTGTATGACCTTGGTCGCTCTGCTGG
TTGGTGGCTGCGCCATATGTCGTAGCATGTATGTAGTCGTGCAAGAGAGT
CGGCTCTTTGGGACGTCGGGTTCCGTGGCGCGTGTAACGCCTCTGTGACA
ACACCGATAACGACAGAAAAGGGGCGGCAGCAGCAGCGGCAGCGGAGTCC
CGATCCGCTTACTGTCATTCTCCCGTACCCCCCTCGCCTTTCGCGTCTCC
CCCAAGCGCAGATACTCCAACCACTGGACGACCTGCTTGACGAGGGAGAA
TCGCTGCTTTATACCGCCGACATCAACATGAGCAATGGCAAGACGCCGGT
GATGCCGGTCCAGGGGGGCTTCCTCGTCATCCGCCCGGATCCGAGAGTCT
TCGAAGACCTGGTGCAGGTGAGGAAAAGTAGGTGCTTACAAGGGACTGCT
GCAGCGTGAGGACGCATGGAAAAACATCCGCAAAAAGCAAGGCAGTTTTA
TGCCGTGTTATTTAAGCCGCTCGTCTCGCCACTTCCAAGGTGAAAGGCTG
CACACGCGTATATTTTTCTCTTCTACGGTTTTTCGTACGAGGGCCGAAGG
GGATGACAAGAGAACCCATCATACTGCTCGAGGAAACGTTTCCAGTTACG
ACCGTGTACCGGTACGCGCAAGTGATTCGCGCAGGCCGGGGCGATGGCGC
CCCGCTGCGAAGTTGACACGGTTCGGAACCATCAAGCGCGGTTTCCGCGC
AGGGGGTTTGTGCGACGACTCCGGCCGAGGCTTCACTTTCTTCCGGCCGT
GTGCACGCCGTTGTGCGTGTCGCGGAGGTTTGTGCTTAGTCGCGATGCTC
CGCTGGATCGTACTTTGTCTTCCTCGCGTCGTGTCATGTCACACCCTTTG
GAAAACGAAGGAAAGCACTTTTAGCCGAACCCTCCCACGGGAGCCAGCCA
CACTCCTCAACCAAGGACCCGGCGAAGGTGCACAGATTGGAACCGAAACG
CTGACGGCAGCCCAGAGTATTCGCGCGAGAACGGTCTGATGGAATTGCGC
GAGCTACCGCACGGTCGAATTCATCATCGCACAGGGTGTACGTTGGGAAT
GTGTGCCAGATTCGCCGTCCGTGCGATCTGTTCAGGGACCGCACCTGGCG
GAGTCATGGCACAGAGGTTGGCGTAAATAGAACAGTCCAGGCACGGATTG
TTTGCCTCAATTTCCGCACAGGGGTCGTAGTCGTGGGACATCCCCGAAGA
ATGGCTCTCCTGCATGATGAAAGTTCAAGCTCGGAATGGATCGCGTATAC
CTCTGCGGCGACTCGCGCTTGCACGGTGAACCGACGTTTTCCCTCAGGTT
GAAAGTTTACGTGTGTGGCGGTCAACCTTGCGCAGTCGGAGCTGTGGAAC
CTGGCGTTTATCCTCCCGCTTCTCAACCGCCGCGAGTTGTAGGCAACTGG
TCGGAATTGCTGGTCGTCGCTTCTCGCCTACCAAACGCATTCGAGCTTGC
GCGAGGCACGCACGCCCGAAAACATTATCGAAAACAACCCCGTGGTCGGG
TGTGCGCCCCCGGCGCGGTCGAAGTTCCCCTCTCTCATAATCATGATCAT
CGTCATCCCACCACCATGATCATCATGATCATCATGATCATCCCGGAGAC
AGGAGCGCACGCCGAGGCAACGTAGAAAAAAGTGCCGCTTTCTCCGTTAC
TTTGGCGCTCTTAGACCGGGTTTAGTGGGAAAGAAAAGTTTGAAGCGAAA
AATTTGTCATTTTACACCTTTCAGGCGCTTTACCTTGCGAAGTACTCTGA
ATCAGCTCTTTCAACCTCGAGAAAAGTTGAAGCTCTCACCGAGGGCTGAG
TACGTTAGATGGCTGTTGTGATGGGGGCTAGGTTTTGGTTTCGTCCATGT
CGCAGAATCTATGCATCTCGAACAAGATTTGCACGGAAATTCGTTTTTTT
TCATTTTATGTCAAAACTTCTGGAGAAAAGTTGCTCTTGGAAAAATCTTG
AGCAAGAATTGACTAATCTTATTCTACCGACAAAACGAGAACCTGGACCC
GGTTGCAGCAGGCAGTCGATGCGTCGAGCCCTCAATGAGAGCTTCAATTT
GTCTCAAGGCTAAAAGAGCTGATTTAGAGTACTCCGCGAGGTGCACCGCC
TGAAAGGTGTGAAAGGATATGTGAGATGACAACTTTTTCACAAAAACTTT
CCTCCCCTGTTAAAACCGTTCTTAGGTTATCTTGCTTGTTTAGTCCTTCT
CGCCGTACGTAGCAGCAGCAGCAGCAGATGCAGTGGTTACTGGTTACCCA
AAACGATGGCTGTGTCTCACTCCTGTTCAACCACGATATGTTTGAACGGT
GGGCACAAGGCACCACGGAGAGAAAAAAAAAGAAACCGCCGTGATAGCGA
GGGGATGGGTAATTCTTCAAGCATGGAAAAGTACCTGGAACGGGCCACAC
AACCTTCGAGAGGGGAAGCAGCGGCCCGCGGGCCAAGAGGGGGTCCCGCG
GTTAACGAACGAATGATCACCAGGGCGATGAAAAGAAGCTGACGTTCCTC
GCCACCTCCCCCCCCAAACCGCGACGCTCTCTTCGGCGTGTCCCAGATCG
TGAAGGACACGCCTTTCTACCCTAACAGAGGATGGGGGAGAAGCGAAATA
GGGCTGTTCTGGGGAGGCATTACGGTCCAGGGGCTCTTGCCGTACTACTA
CGAGGTGAGTATGGAGGCGTGTTTCTTCGTTCCCTGCGCGGCTGACCGAC
TCGCTTGACGCTACGATTGGAAAGACCGGTGGTGTTATCGTCGCCGTCCT
TGGCAGGCGGTCTTCGGCCTTTGTTCGGGTCCAACGGAGGCGGTACGGGT
CGAGGGATAGGCTGATTTCCAGGGGGAGAGATGGACAGACAGACAGACAG
ACAGACACAGAGAGAGACAAAGACAGAGACGCAGAGAGGTTTTTTTTTGC
TCTCCTGTTTGTGTTCCTTCTCGCGGACAGTCATGTCCCGTCGATGCAGA
CCTCAGACCAACGCTGCCGTGCGGCGGGCCCAGCAATCGGCGTTTGGGTC
GCACAATCGGCGTTTCTCCCGCTGCAATTTATTTCTCTCTCTCTCTGTCC
TTCGTAGTGTGGGCCCCTTACCTTCCGTCACAACTCTCAACCCGGCTTCT
CTGCCAAGAGCGTGCTCCCGAGATTTAACAAGCGCCAGCCGTCACAACTC
TCAACCCGGCTTCTCTGCCAAGAGCGTGCTCCCGAGATTTAACAAGCGCC
AGCAGGCGACACGACAAAAAATGTATGCATGCTGTAACGGAGCCGAACAC
CGGGCTCGGCCCTCCTTTGCCGGCGCGTCCTCGCGAGGACGACCCAATCG
ATAACGTCAACACCTTGTTTCGCGTGCCTTTGCGTCGATTTCCCGACCCA
ACTGAGAACAGCGCCGAGCCCCTCCAGAGGTGACGTACCGGGCGGTGGAC
AGATGCGTCTACAACAACATGGTCGACCGACCGGACTGCCAGGCGACAGA
CCTCTCAAGAGTCAGG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10053:142..4657+

>mRNA_H-canaliculatus_F_contig10053.89.1 ID=mRNA_H-canaliculatus_F_contig10053.89.1|Name=mRNA_H-canaliculatus_F_contig10053.89.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1332bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10053:142..4657+ (Hapterophycus canaliculatus Oshoro5f female)
ATGGCAACACGCGGGTCCCATCACCCAGACGCGGCGTGCGCGACGTCGGA
GTTCCTGTGCGACCTGGTGGCGTTCTTGCACGACGACGTCGGCCTACCGA
CAGAAACGCTGCTGCGGCGCCTGGGGTTCCGGGTGATGCGGCCAGGCCTC
CCAGTGGGCCTCGACGACATCAAGGACTACATGGCAACACGCGGGTCCCA
TCACCCAGACGCGGCGTGCGCGACGTCGGAGTTCCTGTGCGACCTGGTGG
CGTTCTTGCACGACGACGTCGGCCTACCGACAGAAACGCTGCTGCGGCGC
CTGGGGTTCCGGGTGATGCGGCCAGGCCTCCCAGTGGGCCTCGACGACAT
CAAGGACTACGTGACCCGGGAGAGAGTGAAGAAGGGCGGCTGCTGCGGTG
TCGCGGAGATGATGAAGTTCTTCGCCTACACCCTCACGGACTACCACCGC
GTCGTGCACCTCGACACCGACACCATCGTGACCCGGGAGAGAGTGAAGAA
GGGCGGCTGCTGCGGTGTCGCGGAGATGATGAAGTTCTTCGCCTACACCC
TCACGGACTACCACCGCGTCGTGCACCTCGACACCGACACCATCATACTC
CAACCACTGGACGACCTGCTTGACGAGGGAGAATCGCTGCTTTATACCGC
CGACATCAACATGAGCAATGGCAAGACGCCGGTGATGCCGGTCCAGGGGG
GCTTCCTCGTCATCCGCCCGGATCCGAGAGTCTTCGAAGACCTGGTGCAG
ATACTCCAACCACTGGACGACCTGCTTGACGAGGGAGAATCGCTGCTTTA
TACCGCCGACATCAACATGAGCAATGGCAAGACGCCGGTGATGCCGGTCC
AGGGGGGCTTCCTCGTCATCCGCCCGGATCCGAGAGTCTTCGAAGACCTG
GTGCAGATCGTGAAGGACACGCCTTTCTACCCTAACAGAGGATGGGGGAG
AAGCGAAATAGGGCTGTTCTGGGGAGGCATTACGGTCCAGGGGCTCTTGC
CGTACTACTACGAGATCGTGAAGGACACGCCTTTCTACCCTAACAGAGGA
TGGGGGAGAAGCGAAATAGGGCTGTTCTGGGGAGGCATTACGGTCCAGGG
GCTCTTGCCGTACTACTACGAGCGCCGAGCCCCTCCAGAGGTGACGTACC
GGGCGGTGGACAGATGCGTCTACAACAACATGGTCGACCGACCGGACTGC
CAGGCGACAGACCTCTCAAGAGTCAGGCGCCGAGCCCCTCCAGAGGTGAC
GTACCGGGCGGTGGACAGATGCGTCTACAACAACATGGTCGACCGACCGG
ACTGCCAGGCGACAGACCTCTCAAGAGTCAGG
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