mRNA_H-canaliculatus_F_contig10970.890.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig10970.890.1 vs. uniprot
Match: D7G769_ECTSI (N/a n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G769_ECTSI) HSP 1 Score: 353 bits (906), Expect = 1.600e-117 Identity = 191/236 (80.93%), Postives = 212/236 (89.83%), Query Frame = 1 Query: 1 LGQAIMATEQYSENKVIRKKRMSAKVDVQDYLMKGLPRKELEDSIQEIFRGADGDGSGALDRAEFIRCLKESGLGFTRRELNLILTLIDKNGDSLIDYQEFFPVCFSMIVEILSDKVQEVPEEEMALRERVHGILLNANGSNDGMTSSAASDYLYGAGLGLRYVS--AIMSAVTVGDDGIVAAKEVADAVAGVMCALKQLERRQYLSAEDASVSEFKASRQAEGRAKVAGMDADEF 702 L QAIMATEQYSENK+IRKKR SAK+DV++YLMKGLPR ELE+SIQEIFRGADGDGSGALDRAEFIRCLKESGLGFTR+ELNL+LTLID+NGD +IDYQEF PVCFSMIVEILSDKVQE+PEEEMALRERV+ IL+ ANG ++ MTS AS+ LY AGLGLRYV AIMSAVTV + G+VAAKEVADAVAGVMCALKQLE RQ+ SAED V+EF+ASRQAEG AKVAG+ ADEF Sbjct: 180 LIQAIMATEQYSENKLIRKKRHSAKMDVENYLMKGLPRHELENSIQEIFRGADGDGSGALDRAEFIRCLKESGLGFTRQELNLVLTLIDENGDGVIDYQEFLPVCFSMIVEILSDKVQEIPEEEMALRERVYSILVEANGGDEHMTSLGASECLYNAGLGLRYVQVPAIMSAVTVSEAGVVAAKEVADAVAGVMCALKQLESRQHESAEDECVTEFRASRQAEGLAKVAGLSADEF 415
BLAST of mRNA_H-canaliculatus_F_contig10970.890.1 vs. uniprot
Match: A0A7S3XPU0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPU0_HETAK) HSP 1 Score: 148 bits (373), Expect = 2.890e-39 Identity = 68/124 (54.84%), Postives = 99/124 (79.84%), Query Frame = 1 Query: 10 AIMATEQYSENKVIRKKRMSAKVDVQDYLMKGLPRKELEDSIQEIFRGADGDGSGALDRAEFIRCLKESGLGFTRRELNLILTLIDKNGDSLIDYQEFFPVCFSMIVEILSDKVQEVPEEEMAL 381 A++A EQ NK +R+ + + ++YL+KG+P++ELE +I+E+F ADGDG+G LDRAEF+RCLKESGLGFTRRELN+ILT++D+NGD L+ Y+EF P+C SM+VE+++ ++QE P +E L Sbjct: 179 ALLAKEQVLANKDLRQGGKGTE-EAREYLLKGMPQQELEQAIREVFAQADGDGNGTLDRAEFLRCLKESGLGFTRRELNIILTMVDQNGDGLVQYEEFIPICLSMLVELVAHQLQETPPDEAQL 301
BLAST of mRNA_H-canaliculatus_F_contig10970.890.1 vs. uniprot
Match: A0A836CFN6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFN6_9STRA) HSP 1 Score: 131 bits (329), Expect = 1.900e-31 Identity = 83/224 (37.05%), Postives = 131/224 (58.48%), Query Frame = 1 Query: 1 LGQAIMATEQYSENKVIRKKRMSAKVDVQDYLMKGLPRKELEDSIQE-------------IFRGADGDGSGALDRAEFIRCLKESGLGFTRRELNLILTLIDKNGDSLIDYQEFFPVCFSMIVEILSDKVQ----------EVPEEEMALRERVHGILLNANGSNDGMTSSAASDYLYGAGLGLRYV---SAIMSAVTVGDDGIVAAKEVADAVAGVMCALKQL 594 L A++A E Y+ R +R SAK + +D+L+KGLP+ ELE SI+ +FRG D DG+G LDRAEF++CL++SGLGFTRRELNL++T++D+N D +IDY+EF PV F+M++++++ ++Q +VP V +L ++ + A + GA LGL V +A+ +G +E+A+AVAG++ A+ +L Sbjct: 188 LVMALLAKESYAST--ARTRRSSAKEEAKDFLLKGLPKGELEASIRXXXXXXXXXXXXXXVFRGVDVDGNGTLDRAEFLKCLRDSGLGFTRRELNLMMTVVDRNNDGVIDYEEFVPVAFNMLLDMVARQLQLREETALCDHDVPRXXXXXXXXVRAVL--RADEQQRISHTDAIQCIMGANLGLPLVQVHAAMSECKEDPSEGTFNCEELAEAVAGMVMAISEL 407
BLAST of mRNA_H-canaliculatus_F_contig10970.890.1 vs. uniprot
Match: A0A5A8CPR3_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CPR3_CAFRO) HSP 1 Score: 119 bits (299), Expect = 7.600e-28 Identity = 74/214 (34.58%), Postives = 124/214 (57.94%), Query Frame = 1 Query: 79 DVQDYLMKGLPRKELEDSIQEIFRGADGDGSGALDRAEFIRCLKESGLGFTRRELNLILTLIDKNGDSLIDYQEFFPVCFSMIVEILSDKVQE--VPEEEMALRERVHGILLNANGSNDGMTSSAA-SDYLYGAGLGLRYV---SAIMSAVTVGDDGIVAAKEVADAVAGVMCALKQLERRQYLSAEDASVSEFKASRQAEGRAKVAGMDADEF 702 + + YL+ G+PR++LE++++++F AD DGSG L R EF L+ESGLG TR+E+N++L +D++ D IDY+EF PVCF+++VEI+S ++++ +P+EE+ LR+ + +A+ +G + A L A +GL V + ++ AV D G+V A AG++ R + +E +R+ + VAGMD F Sbjct: 165 ETEAYLLHGMPREKLENTLRDMFNRADADGSGKLSRTEFQTALRESGLGLTRQEVNVLLAEVDEDEDGEIDYEEFLPVCFNVLVEIVSKQLEDRRIPKEEVDLRDFFVSLFRDADSEGEGRLAPAVIKATLQSADIGLSIVQLTALMVEAVPDDDSGLVEYSSFAAVAAGIVS------RMLAVQTSSDKAAELSEARETGELSLVAGMDRAAF 372
BLAST of mRNA_H-canaliculatus_F_contig10970.890.1 vs. uniprot
Match: A0A7S0D1Q4_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0D1Q4_MICPS) HSP 1 Score: 111 bits (277), Expect = 1.730e-24 Identity = 51/94 (54.26%), Postives = 70/94 (74.47%), Query Frame = 1 Query: 70 AKVDVQDYLMKGLPRKELEDSIQEIFRGADGDGSGALDRAEFIRCLKESGLGFTRRELNLILTLIDKNGDSLIDYQEFFPVCFSMIVEILSDKV 351 A+ VQ +L+ G+PR ELED ++ +F AD DGSGALDR EF RCL+ + LG TR+E+NL+LT +D+NGD LI Y+E P+CF+++VE D V Sbjct: 246 ARESVQMHLLHGMPRDELEDMMRNVFEAADVDGSGALDRKEFSRCLRSAELGLTRKEINLLLTEVDENGDGLISYEEITPLCFNILVERFKDDV 339
BLAST of mRNA_H-canaliculatus_F_contig10970.890.1 vs. uniprot
Match: A0A7S1X6M7_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1X6M7_9CHLO) HSP 1 Score: 101 bits (252), Expect = 6.600e-22 Identity = 45/95 (47.37%), Postives = 71/95 (74.74%), Query Frame = 1 Query: 67 SAKVDVQDYLMKGLPRKELEDSIQEIFRGADGDGSGALDRAEFIRCLKESGLGFTRRELNLILTLIDKNGDSLIDYQEFFPVCFSMIVEILSDKV 351 +A+ +V+D+L+ G+PR ELE+ ++EIF+ +D D SG+L R EF CLK + LG TR+E+N IL+ +D+N D + Y+EF P+CF+++VE D+V Sbjct: 155 AARGEVEDFLLHGMPRAELENMMREIFQRSDVDQSGSLSRKEFRECLKAAELGLTRKEVNAILSEVDENNDGEVSYEEFIPICFNILVERFKDEV 249
BLAST of mRNA_H-canaliculatus_F_contig10970.890.1 vs. uniprot
Match: C1EEG1_MICCC (Radial spoke protein 7 n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EEG1_MICCC) HSP 1 Score: 103 bits (256), Expect = 8.680e-22 Identity = 46/94 (48.94%), Postives = 68/94 (72.34%), Query Frame = 1 Query: 70 AKVDVQDYLMKGLPRKELEDSIQEIFRGADGDGSGALDRAEFIRCLKESGLGFTRRELNLILTLIDKNGDSLIDYQEFFPVCFSMIVEILSDKV 351 A+ V+ +L+ G+PR++LE + +F AD DGSGALDR EF RCLK + LG TR+E+NL+L+ +D +GD ++ Y EF P+CF+++VE D V Sbjct: 169 AREAVEMHLLHGIPREQLEQMMFSVFNAADTDGSGALDRKEFARCLKSAELGLTRKEINLLLSEVDADGDGMVTYDEFVPLCFNILVERFKDDV 262
BLAST of mRNA_H-canaliculatus_F_contig10970.890.1 vs. uniprot
Match: A0A830HGW7_9CHLO (Uncharacterized protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HGW7_9CHLO) HSP 1 Score: 100 bits (250), Expect = 6.060e-21 Identity = 64/194 (32.99%), Postives = 108/194 (55.67%), Query Frame = 1 Query: 88 DYLMKGLPRKELEDSIQEIFRGADGDGSGALDRAEFIRCLKESGLGFTRRELNLILTLIDKNGDSLIDYQEFFPVCFSMIVEILSDKVQEVPEEEMALRERVHGILLNANGSNDGMTS-----SAASDYLYGA-GLGLRYVSAIMSAVTVGDDGIVAAKEVADAVAGVMCAL-------KQLERRQYLSAEDAS 630 +YL++G+ R++LE + +FR AD DGSG LDR+EF CLK + LG T++++N+++ +D +GD I Y EF P+CF+++VE D + + + + + +L++A G DG S S D Y GL + +IMS DD +V + A A A ++ ++ K++E + +S DA+ Sbjct: 166 EYLLRGMSREQLEQMMANVFRAADSDGSGYLDRSEFRNCLKSAELGLTKKDINMLMAEVDIDGDGKITYDEFVPLCFNVLVERFKDNI--IQDRAYNSTDGLESLLVDAFG--DGFASIKELRSCLEDLSYEILGLTNMQIFSIMSMAEKNDDNLVDCLKFAKAAANMIYSMIDNEAQSKRMEAIRAMSESDAA 355
BLAST of mRNA_H-canaliculatus_F_contig10970.890.1 vs. uniprot
Match: A0A7S3F4R4_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3F4R4_9EUKA) HSP 1 Score: 99.8 bits (247), Expect = 1.080e-20 Identity = 56/157 (35.67%), Postives = 92/157 (58.60%), Query Frame = 1 Query: 70 AKVDVQDYLMKGLPRKELEDSIQEIFRGADGDGSGALDRAEFIRCLKESGLGFTRRELNLILTLIDKNGDSLIDYQEFFPVCFSMIVEILSDKVQEVPEEEMALRERVHGILLNANGSNDGMTSSA-ASDYLYGAGLGLR--YVSAIMSAVTVGDDG 531 AK ++++ G+ R+ELE ++E+F AD DGSGAL EF +C++E+ LG TR+E+N ++ +D +GD ++ Y EF P+CF M+VE+L D++ + ++ L E + + NA+ S G A D L A GL + I++ +DG Sbjct: 156 AKEAATEFMLHGMSREELEGVMKEVFLKADADGSGALSLNEFHKCIREADLGLTRKEINALMQEVDADGDGMVTYDEFVPLCFDMLVELLKDELLK-SKQPSELEEYLVQLWSNADTSEQGFLGVADLRDLLRQADFGLTRLQIHTILAEAEYNEDG 311
BLAST of mRNA_H-canaliculatus_F_contig10970.890.1 vs. uniprot
Match: A0A7S3RRR7_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3RRR7_9SPIT) HSP 1 Score: 97.8 bits (242), Expect = 1.380e-20 Identity = 55/154 (35.71%), Postives = 90/154 (58.44%), Query Frame = 1 Query: 79 DVQDYLMKGLPRKELEDSIQEIFRGADGDGSGALDRAEFIRCLKESGLGFTRRELNLILTLIDKNGDSLIDYQEFFPVCFSMIVEILSDKVQEVPEEEMALRERVHGILLNANGSNDG-MTSSAASDYLYGAGLGLR--YVSAIMSAVTVGDDG 531 D+ DYL+ GL ELE+ + +FR AD DGSG L AEF +C++++ LG TR+E+N ++ D NG+ + +QEF P+CF ++VE++ +++ + + ++ I A+ +N G + D L A LGL V +MS +V +DG Sbjct: 136 DIADYLLHGLTPSELEEVMAGVFRKADVDGSGTLSLAEFHKCIRDADLGLTRKEINHLMFSADFNGNKQLSWQEFVPLCFDILVEVMRSELRS-SQPPSVVETKLVEIFRGADDANSGSLPFDDVRDLLQAADLGLTRLQVHTVMSEASVEEDG 288 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10970.890.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10970.890.1 >prot_H-canaliculatus_F_contig10970.890.1 ID=prot_H-canaliculatus_F_contig10970.890.1|Name=mRNA_H-canaliculatus_F_contig10970.890.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=229bp MATEQYSENKVIRKKRMSAKVDVQDYLMKGLPRKELEDSIQEIFRGADGDback to top mRNA from alignment at H-canaliculatus_F_contig10970:822..4073- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig10970.890.1 ID=mRNA_H-canaliculatus_F_contig10970.890.1|Name=mRNA_H-canaliculatus_F_contig10970.890.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3252bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10970:822..4073- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10970:822..4073- >mRNA_H-canaliculatus_F_contig10970.890.1 ID=mRNA_H-canaliculatus_F_contig10970.890.1|Name=mRNA_H-canaliculatus_F_contig10970.890.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1374bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10970:822..4073- (Hapterophycus canaliculatus Oshoro5f female)back to top |