mRNA_H-canaliculatus_F_contig1097.886.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1097.886.1 vs. uniprot
Match: A0A6H5KW94_9PHAE (HELICc2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW94_9PHAE) HSP 1 Score: 444 bits (1141), Expect = 8.600e-141 Identity = 331/558 (59.32%), Postives = 363/558 (65.05%), Query Frame = 1 Query: 433 SYRTMNDCVQRWKHFANGKAWARITAHKEPMIEPRTAADLKAVMEEYDAKIENSGGAVFLAVCRGKVSEGMDFSDSRARCVVVTGIPYAPAMDPKVVLKRKYMSESSLPPGVARVSGNDWYQQQASRAVNQAIGRVIRHRLDYGCVVLCDARFAEERNRRSLSLWARPFVRECSGFGKVAADLTKFFKACAANPGLKHTTAPASARSKXXXXXXXXXXXXXXXXATAASSSHGRARPALSAGRGPAGA----GADXXXXXXAHLSSLQDVGXXXXXXXXXXXXXXXXXXXXXXXXXXXX---AAPLGLLDALKASAKKVGSTGRGAVAEHKGSXXXXXXXXXXXGFAXXXXXX--------------GRS----GRGGGWDSVPLSQRLAVAG--GKITGGAVALGDSCGNAGKQQQXXXXPLXXXXXXXXXXXXKQGSRPRGLGAGRTVGSSESXXXXXXXXXXXGNVPASSAAG---PFPAT------PQPRTTXXXXXXXXXXRHDRAKAXXXXXXXXXXXXXRRELASVLVDLRKSIAPGAFDVFRSRARALKA 1998 +YRTMNDCV RWKHF+NGKAWARI AHKEPMIEPRTAADLKAVMEEYDAKIEN+GGAVFLAVCRGKVSEGMDFSD RARCVVVTGIPYAPAMDPKVVLK+KYMSES LPPGVARV+G++WYQQQASRAVNQAIGRVIRHRLDYGCVVLCD+RFAE+RNR+SLSLWARPFVRECSGFGKVAADLTKFFKACAANP LKH P +++ T A+ SHGR +P S+ P+ A A SSLQDVG XXXXXXXXX AAPLGLLDALKAS + ST GAV + SXXXXXXXXXXX XXXXXX GR+ G GGGWDSVPLSQRLA A GK +GGA G G + XXXXXXX G R GLG RTVG XXXXXXX SS + P P P PR+ XXXXX RRELA+VLV+L++++APGAF++FRSRARALKA Sbjct: 99 TYRTMNDCVHRWKHFSNGKAWARIMAHKEPMIEPRTAADLKAVMEEYDAKIENTGGAVFLAVCRGKVSEGMDFSDGRARCVVVTGIPYAPAMDPKVVLKKKYMSESLLPPGVARVTGDEWYQQQASRAVNQAIGRVIRHRLDYGCVVLCDSRFAEDRNRKSLSLWARPFVRECSGFGKVAADLTKFFKACAANPRLKHVDTPRASKP------------------TPAAPSHGRPQPPSSSSXXPSYARARPAAALGPGGLPPSSSLQDVGDIVKSVVGDPGGGTRQRVVXXXXXXXXXSTPAAPLGLLDALKASWR---STDGGAVVSDQSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGRADEARGSGGGWDSVPLSQRLATASVEGKASGGAAGAATP-GTTG---------VKPTKQXXXXXXXXXGGRLCGLGGQRTVGXXXXXXXXXXXDNSVARAEGSSVSSKPRPRPGVGVEDRRPIPRSAGSGRADNSGGXXXXXXXXXXXXRAGVGSSRRRELAAVLVELKRNVAPGAFELFRSRARALKA 625
BLAST of mRNA_H-canaliculatus_F_contig1097.886.1 vs. uniprot
Match: D8LG75_ECTSI (HELICc2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG75_ECTSI) HSP 1 Score: 407 bits (1045), Expect = 4.380e-133 Identity = 261/407 (64.13%), Postives = 281/407 (69.04%), Query Frame = 1 Query: 403 SRPSRPANVFSYRTMNDCVQRWKHFANGKAWARITAHKEPMIEPRTAADLKAVMEEYDAKIENSGGAVFLAVCRGKVSEGMDFSDSRARCVVVTGIPYAPAMDPKVVLKRKYMSESSLPPGVARVSGNDWYQQQASRAVNQAIGRVIRHRLDYGCVVLCDARFAEERNRRSLSLWARPFVRECSGFGKVAADLTKFFKACAANPGLKHTTAPASARSKXXXXXXXXXXXXXXXXATAASSSHGRARPALSAGRGPAGAGADXXXXXXAHLSSLQDVGXXXXXXXXXXXXXXXXXXXXXXXXXXXX---AAPLGLLDALKASAKKVGSTGRGAVAEHKGSXXXXXXXXXXXGFAXXXXXXGRSGRGG-----------------GWDSVPLSQRLAVA--GGKITGGA 1557 SR S YRTMNDCVQRWKHF+NGKAWARI+AHKEPMIEPRTAADLKAVMEEYDAKIEN+GGAVFLAVCRGKVSEGMDFSD RARCVVVTGIPYAPAMDPKVVLK+KYMSES LPPGVARV+GN+WYQQQASRAVNQAIGRVIRHRLDYGCVVLCD+RFAE+RNR+SLSLWARPFVRECSGFGKVAADLTKFFKACAANP LKH P +++ + ++SS + RARPA + G G SLQDVG XXXX AAPLGLLDALKASA+ +T GA XXXXXXXXXXX XXXXXX GWDSVPLSQRLA A GGK +GGA Sbjct: 16 SRNSSAPPPERYRTMNDCVQRWKHFSNGKAWARISAHKEPMIEPRTAADLKAVMEEYDAKIENTGGAVFLAVCRGKVSEGMDFSDGRARCVVVTGIPYAPAMDPKVVLKKKYMSESLLPPGVARVTGNEWYQQQASRAVNQAIGRVIRHRLDYGCVVLCDSRFAEDRNRKSLSLWARPFVRECSGFGKVAADLTKFFKACAANPSLKHVDTPRASKPTPAAPNHGRPLPP----SLSSSSMYARARPAAALGPG-----------GLPPSPSLQDVGDIVESVVGDPGGGTRKRVVREGRGXXXXXTPAAPLGLLDALKASAR---ATDGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWDSVPLSQRLATASVGGKASGGA 404
BLAST of mRNA_H-canaliculatus_F_contig1097.886.1 vs. uniprot
Match: A0A836CNR1_9STRA (Helicase C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNR1_9STRA) HSP 1 Score: 224 bits (572), Expect = 5.520e-60 Identity = 110/181 (60.77%), Postives = 132/181 (72.93%), Query Frame = 1 Query: 433 SYRTMNDCVQRWKHFANGKAWARITAHKEPMIEPRTAADLKAVMEEYDAKIENSGGAVFLAVCRGKVSEGMDFSDSRARCVVVTGIPYAPAMDPKVVLKRKYMSESSLPPGVARVSGNDWYQQQASRAVNQAIGRVIRHRLDYGCVVLCDARFAEERNRRSLSLWARPFVRECSGFGKVAA 975 +Y M CV WK + WAR+ AHK + EPR AADL A M Y+ + GGA F AVCRGK+SEGMDFSD +ARCVV+TGIPYAP DPKV+LKR+YM E+ P G A++SG++WY Q A+RAVNQAIGRV+RHRLDYG VVLCD RF EER+R LS WA PFVR + F +V+A Sbjct: 556 TYAVMAACVDWWKAHDH---WARMEAHKALLSEPRGAADLSAAMRAYEDALAARGGAAFFAVCRGKLSEGMDFSDDKARCVVITGIPYAPVKDPKVMLKRQYMDETPAPQGCAKLSGSEWYAQCAARAVNQAIGRVVRHRLDYGAVVLCDERFDEERHRAGLSAWAHPFVRSYANFQEVSA 733
BLAST of mRNA_H-canaliculatus_F_contig1097.886.1 vs. uniprot
Match: A0A433Q1I5_9FUNG (HELICc2 domain-containing protein n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433Q1I5_9FUNG) HSP 1 Score: 197 bits (502), Expect = 4.500e-55 Identity = 100/190 (52.63%), Postives = 128/190 (67.37%), Query Frame = 1 Query: 445 MNDCVQRWKH--FANGKAWARITAHKEPMIEPRTAADLKAVMEEYDAKIE--NSGGAVFLAVCRGKVSEGMDFSDSRARCVVVTGIPYAPAMDPKVVLKRKYMSE--SSLPPGVARVSGNDWYQQQASRAVNQAIGRVIRHRLDYGCVVLCDARFAEERNRRSLSLWARPFVRECSGFGKVAADLTKFFK 996 M DC+ WK + W RI HK+ IEP+ +L M+++ K+ N+ GAVF AVCRGKVSEG+DF+DSR R VVVTGIPYA + DPKV+LK+K++ + +S +SGN+WY+QQA RAVNQAIGRVIRHR DYG ++LCD RFA LS W RPFV+ C+ FG+ +TKFFK Sbjct: 1 MADCIAAWKQPMGPSKSIWDRINHHKKAFIEPKNKQELGQTMDDFYKKVADANTTGAVFFAVCRGKVSEGVDFADSRGRAVVVTGIPYASSRDPKVILKKKFLDDVQASDRSVTTSISGNEWYKQQAIRAVNQAIGRVIRHRKDYGAILLCDERFASPAIISQLSGWVRPFVKVCNNFGEAQGQVTKFFK 190
BLAST of mRNA_H-canaliculatus_F_contig1097.886.1 vs. uniprot
Match: A0A3M6V9X4_9STRA (HELICc2 domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V9X4_9STRA) HSP 1 Score: 204 bits (518), Expect = 4.360e-53 Identity = 95/193 (49.22%), Postives = 133/193 (68.91%), Query Frame = 1 Query: 433 SYRTMNDCVQRWKHFANGKA----WARITAHKEPMIEPRTAADLKAVMEEYDAKI-ENSGGAVFLAVCRGKVSEGMDFSDSRARCVVVTGIPYAPAMDPKVVLKRKYMSESSLPPGVARVSGNDWYQQQASRAVNQAIGRVIRHRLDYGCVVLCDARFAEERNRRSLSLWARPFVRECSGFGKVAADLTKFFK 996 SY + + + +W+ G++ W R+ HK+P +EPR A+ KAV++EY I +N GAVF AVCRGKVSEG+DFS+ + R VV+TG+P+ P DPK+VLK+ + + +PPG +++GN WY QQASRAVNQAIGRVIRHR DYG ++L D RFA ++ + LS W +P+ C G+G+ LT+FFK Sbjct: 94 SYSILEESIDKWRKPTAGESSLSIWDRMVQHKQPFVEPRGRAEFKAVVDEYHQTIIDNPKGAVFFAVCRGKVSEGIDFSNDKGRAVVITGLPFPPTKDPKIVLKKSILDSAVVPPGELKLTGNAWYIQQASRAVNQAIGRVIRHRHDYGAIILLDERFALKQQQECLSKWLQPYCHVCRGYGEAHIGLTRFFK 286
BLAST of mRNA_H-canaliculatus_F_contig1097.886.1 vs. uniprot
Match: W2PIE2_PHYPN (DNA helicase n=12 Tax=Phytophthora TaxID=4783 RepID=W2PIE2_PHYPN) HSP 1 Score: 204 bits (519), Expect = 8.370e-52 Identity = 97/193 (50.26%), Postives = 133/193 (68.91%), Query Frame = 1 Query: 433 SYRTMNDCVQRWKHFANGKA----WARITAHKEPMIEPRTAADLKAVMEEYDAKI-ENSGGAVFLAVCRGKVSEGMDFSDSRARCVVVTGIPYAPAMDPKVVLKRKYMSESSLPPGVARVSGNDWYQQQASRAVNQAIGRVIRHRLDYGCVVLCDARFAEERNRRSLSLWARPFVRECSGFGKVAADLTKFFK 996 SY + + V +W+ A G++ W RI K+ +EPR AD KAV++EY I +N GAVF AVCRGKVSEG+DFS+ + R VV+TG+P+ P DPK++LK+ + E+ +PPG +++GN WY QQASRAVNQAIGRVIRHR DYG ++L D RFA ++ + LS W +P+ C G+G+ LT+FFK Sbjct: 533 SYSILEESVNKWQRPAAGESALSIWDRIAQQKQTFVEPRGRADFKAVVDEYHQAIADNPKGAVFFAVCRGKVSEGIDFSNDKGRAVVITGLPFPPTKDPKIILKKSILDEAVVPPGELKLTGNAWYIQQASRAVNQAIGRVIRHRHDYGAIILLDERFALKQQQECLSKWLQPYCHTCRGYGEAHIGLTRFFK 725
BLAST of mRNA_H-canaliculatus_F_contig1097.886.1 vs. uniprot
Match: G4YUL1_PHYSP (DNA helicase n=6 Tax=Phytophthora TaxID=4783 RepID=G4YUL1_PHYSP) HSP 1 Score: 204 bits (518), Expect = 1.090e-51 Identity = 97/193 (50.26%), Postives = 132/193 (68.39%), Query Frame = 1 Query: 433 SYRTMNDCVQRWKHFANGKA----WARITAHKEPMIEPRTAADLKAVMEEYDAKI-ENSGGAVFLAVCRGKVSEGMDFSDSRARCVVVTGIPYAPAMDPKVVLKRKYMSESSLPPGVARVSGNDWYQQQASRAVNQAIGRVIRHRLDYGCVVLCDARFAEERNRRSLSLWARPFVRECSGFGKVAADLTKFFK 996 SY + + + +WK A G++ W RI K+ +EPR AD KAV++EY I +N GAVF AVCRGKVSEG+DFS+ + R VV+TG+P+ P DPK+VLK+ + E+ +PPG +++GN WY QQASRAVNQAIGRVIRHR DYG ++L D RF ++ + LS W +P+ C G+G+ LT+FFK Sbjct: 537 SYSILEESIDKWKRPAAGESALSIWDRIVQQKQTFVEPRGRADFKAVVDEYHQAITDNPKGAVFFAVCRGKVSEGIDFSNDKGRAVVITGLPFPPTKDPKIVLKKSILDEAMVPPGELKLTGNAWYIQQASRAVNQAIGRVIRHRHDYGAIILLDERFVLKQQQECLSKWLQPYCHTCRGYGESHIGLTRFFK 729
BLAST of mRNA_H-canaliculatus_F_contig1097.886.1 vs. uniprot
Match: A0A5D6XGF1_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XGF1_9STRA) HSP 1 Score: 202 bits (515), Expect = 3.000e-51 Identity = 98/198 (49.49%), Postives = 132/198 (66.67%), Query Frame = 1 Query: 433 SYRTMNDCVQRWKHFANGKA----WARITAHKEPMIEPRTAADLKAVMEEYDAKIE-NSGGAVFLAVCRGKVSEGMDFSDSRARCVVVTGIPYAPAMDPKVVLKRKYMSESSLPPGVARVSGNDWYQQQASRAVNQAIGRVIRHRLDYGCVVLCDARFAEERNRRSLSLWARPFVRECSGFGKVAADLTKFFKACAAN 1011 SY + + V RW+ A G + W RI K+ +EPR D K V++EY I N+ GAVF AVCRGKVSEG+DFS+ + R VV+TG+P+ P DPK+VLK+ + E+ +PPG +++GN WY QQASRAVNQAIGRVIRHR DYG ++L D RFA ++ + LS W +P+ C +G+ LT+FFK+ AN Sbjct: 553 SYTILEESVARWQRAAQGDSSSSIWDRIVQQKQVFVEPRARLDFKEVVDEYHEAIRTNTNGAVFFAVCRGKVSEGIDFSNDKGRAVVITGLPFPPTKDPKIVLKKSILDEAVVPPGELKLTGNQWYIQQASRAVNQAIGRVIRHRHDYGAIILLDERFALQQQQNCLSKWLQPYCFTCRSYGEAHIGLTRFFKSNKAN 750
BLAST of mRNA_H-canaliculatus_F_contig1097.886.1 vs. uniprot
Match: A0A6A3N7T4_9STRA (Regulator of telomere elongation helicase 1 n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3N7T4_9STRA) HSP 1 Score: 202 bits (514), Expect = 5.130e-51 Identity = 96/193 (49.74%), Postives = 132/193 (68.39%), Query Frame = 1 Query: 433 SYRTMNDCVQRWKHFANGKA----WARITAHKEPMIEPRTAADLKAVMEEYDAKI-ENSGGAVFLAVCRGKVSEGMDFSDSRARCVVVTGIPYAPAMDPKVVLKRKYMSESSLPPGVARVSGNDWYQQQASRAVNQAIGRVIRHRLDYGCVVLCDARFAEERNRRSLSLWARPFVRECSGFGKVAADLTKFFK 996 SY + + + +W+ A G++ W RI K+ +EPR D KAV++EY I +N GAVF AVCRGKVSEG+DFS+ + R VV+TG+P+ P DPK+VLK+ + E+ +PPG +++GN WY QQASRAVNQAIGRVIRHR DYG ++L D RFA ++ + LS W +P+ C G+G+ LT+FFK Sbjct: 536 SYSILEESIDKWRRPAAGESPLSIWDRIVQQKQTFVEPRGRVDFKAVVDEYHQAITDNPKGAVFFAVCRGKVSEGIDFSNDKGRAVVITGLPFPPTKDPKIVLKKSILDEALVPPGELKLTGNAWYIQQASRAVNQAIGRVIRHRHDYGAIILLDERFALKQQQECLSKWLQPYCHTCRGYGESHIGLTRFFK 728
BLAST of mRNA_H-canaliculatus_F_contig1097.886.1 vs. uniprot
Match: A0A433D086_9FUNG (Helicase C-terminal domain-containing protein n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433D086_9FUNG) HSP 1 Score: 201 bits (512), Expect = 5.540e-51 Identity = 102/194 (52.58%), Postives = 130/194 (67.01%), Query Frame = 1 Query: 433 SYRTMNDCVQRWKH--FANGKAWARITAHKEPMIEPRTAADLKAVMEEYDAKIE--NSGGAVFLAVCRGKVSEGMDFSDSRARCVVVTGIPYAPAMDPKVVLKRKYMSE--SSLPPGVARVSGNDWYQQQASRAVNQAIGRVIRHRLDYGCVVLCDARFAEERNRRSLSLWARPFVRECSGFGKVAADLTKFFK 996 SY M DC+ WK + W RI HK+ IEP+ +L M+++ K+ N+ GAVF AVCRGKVSEG+DF+DSR R VVVTGIPYA + DPKV+LK+K++ + +S +SGN+WY+QQA RAVNQAIGRVIRHR DYG ++LCD RFA LS W RPFV+ C+ FG+ +TKFFK Sbjct: 462 SYSVMADCIAAWKQPMGPSKSIWDRINHHKKAFIEPKNKQELGQTMDDFYKKVADANTTGAVFFAVCRGKVSEGVDFADSRGRAVVVTGIPYASSRDPKVILKKKFLDDVQASDRSVTTSISGNEWYKQQAIRAVNQAIGRVIRHRKDYGAILLCDERFASPAIISQLSGWVRPFVKVCNNFGEAQGQVTKFFK 655 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1097.886.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1097.886.1 >prot_H-canaliculatus_F_contig1097.886.1 ID=prot_H-canaliculatus_F_contig1097.886.1|Name=mRNA_H-canaliculatus_F_contig1097.886.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=675bp GGGGGGGGGGGGGGGGGGVGGGGGGGGGGGGLFGLACWSCASTSGRMGFLback to top mRNA from alignment at H-canaliculatus_F_contig1097:120..4656+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1097.886.1 ID=mRNA_H-canaliculatus_F_contig1097.886.1|Name=mRNA_H-canaliculatus_F_contig1097.886.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=4537bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1097:120..4656+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1097:120..4656+ >mRNA_H-canaliculatus_F_contig1097.886.1 ID=mRNA_H-canaliculatus_F_contig1097.886.1|Name=mRNA_H-canaliculatus_F_contig1097.886.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=4050bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1097:120..4656+ (Hapterophycus canaliculatus Oshoro5f female)back to top |