Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-17_004020.2 |
| Exons | 3 |
| Model size | 1418 |
| Cds size | 1416 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622928767.9912965-CDS-H-canaliculatus_F_contig1097:17971..18456 | 1622928767.9912965-CDS-H-canaliculatus_F_contig1097:17971..18456 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1097 17972..18456 - |
| 1696845556.3016758-CDS-H-canaliculatus_F_contig1097:17971..18456 | 1696845556.3016758-CDS-H-canaliculatus_F_contig1097:17971..18456 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1097 17972..18456 - |
| 1622928768.004057-CDS-H-canaliculatus_F_contig1097:19322..19371 | 1622928768.004057-CDS-H-canaliculatus_F_contig1097:19322..19371 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1097 19323..19371 - |
| 1696845556.3152177-CDS-H-canaliculatus_F_contig1097:19322..19371 | 1696845556.3152177-CDS-H-canaliculatus_F_contig1097:19322..19371 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1097 19323..19371 - |
| 1622928768.0172448-CDS-H-canaliculatus_F_contig1097:20297..21179 | 1622928768.0172448-CDS-H-canaliculatus_F_contig1097:20297..21179 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1097 20298..21179 - |
| 1696845556.3277977-CDS-H-canaliculatus_F_contig1097:20297..21179 | 1696845556.3277977-CDS-H-canaliculatus_F_contig1097:20297..21179 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1097 20298..21179 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1097.888.1 >prot_H-canaliculatus_F_contig1097.888.1 ID=prot_H-canaliculatus_F_contig1097.888.1|Name=mRNA_H-canaliculatus_F_contig1097.888.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=472bp
ATATTGPAAAPTVTSTTGPAAPPTATTTTGPVVAPTQQGTTEPVTPPTAT
ATTGPAAPPTATATTGPVAPPTTTSTTGPVVSPTQQGTTEPATPPTATAT
TGPAAPPTATATTGPVAPPTATTTTGPVVAPTQQGTTEPVAPPTATATTG
PAAAPTVTATTGPVAPPTTAATTEPAGTDPPTIVLSSPSPGTAPPQVSVP
TASTTSPVIQIDPPTASTTSSPLSAPNAPTIPPIIPTALPVASPPDPEPA
TTGPVEQPAAAPGIPTNAPGVAQQPVVPGTTPAPAPAVAPSTQQIATVQP
VVGQQPSVSPVASPTVTVPTPTADPISVVPSPPPAPIALVPSPPPAPAAA
VTGTASPAVPPGTPTAPPAAGPPTAVVPTSQPGAVVPGQPTLQPLLPGQS
PTVATTPPLLPGQTAAPVARDVPTTPLVPTAAPIAGGTARPAVAGPVGAT
VPPAVAPLQPTMSPIVGAPTIR back to topmRNA from alignment at H-canaliculatus_F_contig1097:17970..21179- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-canaliculatus_F_contig1097.888.1 ID=mRNA_H-canaliculatus_F_contig1097.888.1|Name=mRNA_H-canaliculatus_F_contig1097.888.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3210bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1097:17970..21179- (Hapterophycus canaliculatus Oshoro5f female)
GCAACGGCAACAACCGGGCCGGCGGCGGCGCCTACGGTAACGTCAACAAC
CGGACCGGCCGCGCCACCCACGGCAACGACAACAACCGGACCGGTTGTAG
CGCCTACACAGCAGGGGACGACGGAGCCGGTGACGCCGCCCACGGCAACG
GCAACAACCGGGCCGGCCGCGCCACCTACGGCAACGGCAACCACCGGGCC
GGTCGCGCCACCTACGACGACGTCAACGACGGGGCCGGTCGTATCGCCTA
CGCAACAGGGGACGACGGAGCCGGCGACGCCGCCGACGGCAACGGCAACA
ACCGGGCCGGCCGCGCCACCTACGGCAACGGCAACAACCGGGCCGGTTGC
ACCACCCACGGCAACGACAACAACCGGACCGGTTGTAGCGCCTACGCAGC
AGGGGACGACGGAGCCGGTCGCGCCACCTACAGCAACGGCAACAACCGGG
CCGGCGGCGGCGCCTACGGTAACGGCAACAACCGGGCCGGTTGCGCCACC
TACGACAGCGGCAACAACCGAACCGGCAGGGACCGACCCACCCACAATTG
TTTTGAGTTCGCCTTCCCCTGGCACCGCCCCACCTCAAGTGTCCGTCCCG
ACTGCAAGCACGACGTCCCCGGTAATACAGATAGACCCCCCCACCGCCTC
AACAACCTCGTCACCCCTTTCCGCCCCAAACGCTCCCACGATACCTCCGA
TCATTCCTACCGCTCTTCCCGTGGCATCTCCTCCTGATCCTGAACCTGCT
ACAACGGGACCGGTGGAGCAGCCTGCTGCCGCCCCTGGAATTCCCACCAA
TGCCCCTGGGGTCGCACAGCAGCCGGTGGTGCCGGGGACGACACCGGCAC
CAGCGCCAGCTGTCGCACCGAGCACTCAGCAGGTGTGCTAGATTGTGTGT
GCGCGCGTGTGCTGGCCATTTTTTGCTGTCATCGTGTGCGTGCCAAGACG
CGTCGCTCAAATCGGAACCGCGCTTGATGATGCCAGTGATTAGTTGGCCA
TCCTTGGTGCAGGTTTAGGACCGCCCAGGTCAGCAGCCCGGGTTCCAAAA
ACTGGCGGCAGTCGATATCAGCGATGAGTCGAATTTCTTTCTAGTAAGTC
AACTTGAAAGCCACCCCATGAGCTGTATCTTGAAGACACAAATATACTTT
ACGAACCCGTCATAAACAGGACCAAGGGCTCGATCTCACGTGGATCCCAG
AGTTTGGGTGTTTTTGAACCCGTCTGCAGGAAGCTTAAGATCAGAACCTC
GTCCGTTGCTTTAGCCTACTCCTGAAAGAGCTGTGTAGAGGATACAAACT
GCTTGTTGTTGAACAAAGTCTCTCTGGCGCCATCTTTCCTTGTTCGTGAG
GGCGTCCTCTTGCCCGACATGAAGATTGCGCACTGTCAGACTTGCAGCTG
CCGTCCGGGAGCCTTCTCGTGACGAGCGTGTTGGTGTTAACGGGTCCAAG
GGCGTTCCGAGAAGTTTTATCACTTGGCCGCAGAGAGCCACAACTCGTCT
TACTGTTCCTGCCATGCAGCTAAATGTACAAACGCCTCTATTCTCATCAC
GCGATCAGCATGATGGCCGTACCGCCGCTACCAAGCCCGCCTGTCGCTGC
AAAAATGTGTCAAGCCTAGCGATCGAACGTTCTGTTCTGCAAGATCCCAC
CATTTCTCGGATCGAGTTAGTTGTCATGAAAATCTTCGTGCCTTCTCAGG
CCGATTGTTTTCGAAGTACATCGCAGGTGAACTGATCCCGGCGTAATATT
TGTCCATCTTGTCCATTGCCCTTCCCTCCTCCCCGTTGTCATCGCCGTGA
AACTCAAGATCGCGACGGTCCAGCCTGTGGTCGGACAGCAACCAAGCGTT
TCTCCAGGTGAGCACAAACGGGATTCAATCTGGAATCGATGTGTGATCCG
GAGGAACGATTCCTGGCTGCTTTCGCGATTTTTTTGCTGCCTCAGCAACG
TCCGTGATTGATACCGCGGGGTCAAATCAACCCAAGTTTTTTTTTGTTGT
GCCCGAAAAACGAAGATCATGCGGCTTGAGACGAATCAGCCATCCACACA
TCCTTCGCTGACCTGTGAGGTGTATTGGCTCTTCGCCTGTCCGGCGTACC
ATGAATGAGGGTCTCAAAGCGTCTGAGTCAACGTGTCAACCCCCACATGC
CCAAAAATAAACTGTTGAGTTCACGGGCTGATGGCCGCATCACTTTGTCA
TGTTGAGACTCGCGAAACGTCCCGCCCTCAAGAATGACTCCTCACCGTGC
CGCCGTGGTATGGTTGACAGGTGTCCAGTCACGTTGGCACCGCGAGGGGT
TGTCCTACGTTGTTGCGTGCTGTCCGTCGCCTCCTTCCTCTTTGACGAGG
CTTAAAAGAGGCTCGATGCCGCTGTAGGCAGCTCCGTAGGAAGCGCTTGG
ACACGTCAATGTTTTCGGCCCGGCCGTCGCCATCGCGCGGTCATCTGCGT
ATCGTGCCGCGTTCCGCCTAACGTGCACAGCCTCAGCTTTTTTTACTCCT
CGAGTCAGGCCGCAAAAGAAAACTCTCGACTCTGGCGCGGAGCCGCCCGG
CCCGACCGCGTAACATCTGCCATACGCTGCCGAAACAAGTAGGGTGGTCG
TCCATGTTTCTTCACCCGCCTCTCACCCGCATCTCGAATCGCCCGCACCC
TTCCTCGCGTCTCGTCGCATCGTATACACCGTTACCGAATACCGGTGATC
TCCGCACGCTCGGCGCTTCACAGTAGCGTCGCCGACCGTGACTGTCCCTA
CGCCAACGGCGGATCCCATAAGCGTCGTGCCTTCCCCACCCCCAGCTCCC
ATCGCCCTGGTACCCTCTCCCCCCCCCGCGCCCGCGGCGGCGGTAACCGG
TACCGCTTCCCCGGCCGTTCCCCCCGGAACGCCGACGGCGCCGCCCGCGG
CGGGACCTCCTACCGCCGTTGTTCCGACCTCGCAGCCTGGTGCCGTGGTT
CCTGGCCAGCCAACCCTCCAGCCCCTTCTTCCCGGACAATCCCCCACCGT
CGCCACCACCCCGCCCCTCTTGCCGGGGCAGACCGCCGCCCCCGTCGCCA
GGGATGTTCCCACCACACCCCTTGTTCCCACCGCCGCCCCCATCGCCGGC
GGCACCGCCCGCCCGGCCGTAGCAGGTCCCGTAGGCGCCACCGTGCCGCC
CGCTGTCGCGCCGTTGCAGCCGACTATGTCGCCGATCGTTGGGGCTCCCA
CCATCCGCCC back to topCoding sequence (CDS) from alignment at H-canaliculatus_F_contig1097:17970..21179- >mRNA_H-canaliculatus_F_contig1097.888.1 ID=mRNA_H-canaliculatus_F_contig1097.888.1|Name=mRNA_H-canaliculatus_F_contig1097.888.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2832bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1097:17970..21179- (Hapterophycus canaliculatus Oshoro5f female)
GCAACGGCAACAACCGGGCCGGCGGCGGCGCCTACGGTAACGTCAACAAC
CGGACCGGCCGCGCCACCCACGGCAACGACAACAACCGGACCGGTTGTAG
CGCCTACACAGCAGGGGACGACGGAGCCGGTGACGCCGCCCACGGCAACG
GCAACAACCGGGCCGGCCGCGCCACCTACGGCAACGGCAACCACCGGGCC
GGTCGCGCCACCTACGACGACGTCAACGACGGGGCCGGTCGTATCGCCTA
CGCAACAGGGGACGACGGAGCCGGCGACGCCGCCGACGGCAACGGCAACA
ACCGGGCCGGCCGCGCCACCTACGGCAACGGCAACAACCGGGCCGGTTGC
ACCACCCACGGCAACGACAACAACCGGACCGGTTGTAGCGCCTACGCAGC
AGGGGACGACGGAGCCGGTCGCGCCACCTACAGCAACGGCAACAACCGGG
CCGGCGGCGGCGCCTACGGTAACGGCAACAACCGGGCCGGTTGCGCCACC
TACGACAGCGGCAACAACCGAACCGGCAGGGACCGACCCACCCACAATTG
TTTTGAGTTCGCCTTCCCCTGGCACCGCCCCACCTCAAGTGTCCGTCCCG
ACTGCAAGCACGACGTCCCCGGTAATACAGATAGACCCCCCCACCGCCTC
AACAACCTCGTCACCCCTTTCCGCCCCAAACGCTCCCACGATACCTCCGA
TCATTCCTACCGCTCTTCCCGTGGCATCTCCTCCTGATCCTGAACCTGCT
ACAACGGGACCGGTGGAGCAGCCTGCTGCCGCCCCTGGAATTCCCACCAA
TGCCCCTGGGGTCGCACAGCAGCCGGTGGTGCCGGGGACGACACCGGCAC
CAGCGCCAGCTGTCGCACCGAGCACTCAGCAGGCAACGGCAACAACCGGG
CCGGCGGCGGCGCCTACGGTAACGTCAACAACCGGACCGGCCGCGCCACC
CACGGCAACGACAACAACCGGACCGGTTGTAGCGCCTACACAGCAGGGGA
CGACGGAGCCGGTGACGCCGCCCACGGCAACGGCAACAACCGGGCCGGCC
GCGCCACCTACGGCAACGGCAACCACCGGGCCGGTCGCGCCACCTACGAC
GACGTCAACGACGGGGCCGGTCGTATCGCCTACGCAACAGGGGACGACGG
AGCCGGCGACGCCGCCGACGGCAACGGCAACAACCGGGCCGGCCGCGCCA
CCTACGGCAACGGCAACAACCGGGCCGGTTGCACCACCCACGGCAACGAC
AACAACCGGACCGGTTGTAGCGCCTACGCAGCAGGGGACGACGGAGCCGG
TCGCGCCACCTACAGCAACGGCAACAACCGGGCCGGCGGCGGCGCCTACG
GTAACGGCAACAACCGGGCCGGTTGCGCCACCTACGACAGCGGCAACAAC
CGAACCGGCAGGGACCGACCCACCCACAATTGTTTTGAGTTCGCCTTCCC
CTGGCACCGCCCCACCTCAAGTGTCCGTCCCGACTGCAAGCACGACGTCC
CCGGTAATACAGATAGACCCCCCCACCGCCTCAACAACCTCGTCACCCCT
TTCCGCCCCAAACGCTCCCACGATACCTCCGATCATTCCTACCGCTCTTC
CCGTGGCATCTCCTCCTGATCCTGAACCTGCTACAACGGGACCGGTGGAG
CAGCCTGCTGCCGCCCCTGGAATTCCCACCAATGCCCCTGGGGTCGCACA
GCAGCCGGTGGTGCCGGGGACGACACCGGCACCAGCGCCAGCTGTCGCAC
CGAGCACTCAGCAGATCGCGACGGTCCAGCCTGTGGTCGGACAGCAACCA
AGCGTTTCTCCAGATCGCGACGGTCCAGCCTGTGGTCGGACAGCAACCAA
GCGTTTCTCCAGTAGCGTCGCCGACCGTGACTGTCCCTACGCCAACGGCG
GATCCCATAAGCGTCGTGCCTTCCCCACCCCCAGCTCCCATCGCCCTGGT
ACCCTCTCCCCCCCCCGCGCCCGCGGCGGCGGTAACCGGTACCGCTTCCC
CGGCCGTTCCCCCCGGAACGCCGACGGCGCCGCCCGCGGCGGGACCTCCT
ACCGCCGTTGTTCCGACCTCGCAGCCTGGTGCCGTGGTTCCTGGCCAGCC
AACCCTCCAGCCCCTTCTTCCCGGACAATCCCCCACCGTCGCCACCACCC
CGCCCCTCTTGCCGGGGCAGACCGCCGCCCCCGTCGCCAGGGATGTTCCC
ACCACACCCCTTGTTCCCACCGCCGCCCCCATCGCCGGCGGCACCGCCCG
CCCGGCCGTAGCAGGTCCCGTAGGCGCCACCGTGCCGCCCGCTGTCGCGC
CGTTGCAGCCGACTATGTCGCCGATCGTTGGGGCTCCCACCATCCGCTAG
CGTCGCCGACCGTGACTGTCCCTACGCCAACGGCGGATCCCATAAGCGTC
GTGCCTTCCCCACCCCCAGCTCCCATCGCCCTGGTACCCTCTCCCCCCCC
CGCGCCCGCGGCGGCGGTAACCGGTACCGCTTCCCCGGCCGTTCCCCCCG
GAACGCCGACGGCGCCGCCCGCGGCGGGACCTCCTACCGCCGTTGTTCCG
ACCTCGCAGCCTGGTGCCGTGGTTCCTGGCCAGCCAACCCTCCAGCCCCT
TCTTCCCGGACAATCCCCCACCGTCGCCACCACCCCGCCCCTCTTGCCGG
GGCAGACCGCCGCCCCCGTCGCCAGGGATGTTCCCACCACACCCCTTGTT
CCCACCGCCGCCCCCATCGCCGGCGGCACCGCCCGCCCGGCCGTAGCAGG
TCCCGTAGGCGCCACCGTGCCGCCCGCTGTCGCGCCGTTGCAGCCGACTA
TGTCGCCGATCGTTGGGGCTCCCACCATCCGC back to top
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