mRNA_H-canaliculatus_F_contig1088.818.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1088.818.1
Unique NamemRNA_H-canaliculatus_F_contig1088.818.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig1088.818.1 vs. uniprot
Match: D7G7D7_ECTSI (Acyl_transf_3 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7D7_ECTSI)

HSP 1 Score: 111 bits (277), Expect = 4.730e-27
Identity = 49/61 (80.33%), Postives = 52/61 (85.25%), Query Frame = 1
Query:    1 MRKSNWGRWILDRLQCFSLVINTKSLLAPPRAGDEFRCLEGVRTLSMMWVVLGHCFAYNVT 183
            MRKS WGRW  DRLQCFSL+INT SLLAPPR  DEF  L+GVRT+SMMWVVLGH FAYNVT
Sbjct:  392 MRKSEWGRWSYDRLQCFSLIINTNSLLAPPRVADEFPALDGVRTMSMMWVVLGHTFAYNVT 452          
BLAST of mRNA_H-canaliculatus_F_contig1088.818.1 vs. uniprot
Match: A0A7M5V8Z0_9CNID (NRF domain-containing protein n=2 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5V8Z0_9CNID)

HSP 1 Score: 53.5 bits (127), Expect = 9.830e-7
Identity = 20/58 (34.48%), Postives = 35/58 (60.34%), Query Frame = 1
Query:    7 KSNWGRWILDRLQCFSLVINTKSLLAPPRAGDEFRCLEGVRTLSMMWVVLGHCFAYNV 180
            K   G  ++  L CFS++ NT++L++     D  R + G+R +SM WV+LGH + + +
Sbjct:  298 KMTRGNGLIQFLVCFSILKNTRTLISTSAPKDSIRSINGIRAISMTWVILGHVYFFGI 355          
BLAST of mRNA_H-canaliculatus_F_contig1088.818.1 vs. uniprot
Match: UPI001CB98009 (nose resistant to fluoxetine protein 6-like isoform X1 n=3 Tax=Bombus pyrosoma TaxID=396416 RepID=UPI001CB98009)

HSP 1 Score: 52.8 bits (125), Expect = 1.840e-6
Identity = 20/51 (39.22%), Postives = 31/51 (60.78%), Query Frame = 1
Query:   28 ILDRLQCFSLVINTKSLLAPPRAGDEFRCLEGVRTLSMMWVVLGHCFAYNV 180
            I   L CFS + N K +  P ++GD  R   G++TL+++W++LGH   Y V
Sbjct:  289 ISQYLLCFSFLTNVKEIFKPEKSGDNLRVFYGLKTLTIVWIILGHTLIYAV 339          
BLAST of mRNA_H-canaliculatus_F_contig1088.818.1 vs. uniprot
Match: UPI001CB94054 (nose resistant to fluoxetine protein 6-like isoform X1 n=3 Tax=Bombus pyrosoma TaxID=396416 RepID=UPI001CB94054)

HSP 1 Score: 52.8 bits (125), Expect = 1.840e-6
Identity = 20/49 (40.82%), Postives = 30/49 (61.22%), Query Frame = 1
Query:   28 ILDRLQCFSLVINTKSLLAPPRAGDEFRCLEGVRTLSMMWVVLGHCFAY 174
            I   L CFS + N K +  P ++GD  R   G++TL+M+W++LGH   Y
Sbjct:  289 ISQYLLCFSFLTNVKEIFKPEKSGDNLRVFYGLKTLTMVWIILGHVLFY 337          
BLAST of mRNA_H-canaliculatus_F_contig1088.818.1 vs. uniprot
Match: A0A482VP81_9CUCU (Acyl_transf_3 domain-containing protein (Fragment) n=1 Tax=Asbolus verrucosus TaxID=1661398 RepID=A0A482VP81_9CUCU)

HSP 1 Score: 52.0 bits (123), Expect = 3.300e-6
Identity = 20/44 (45.45%), Postives = 30/44 (68.18%), Query Frame = 1
Query:   49 FSLVINTKSLLAPPRAGDEFRCLEGVRTLSMMWVVLGHCFAYNV 180
            FSL  NTKSLL+   + D   CL G++ LS+MW+++GH F + +
Sbjct:   22 FSLYTNTKSLLSIKCSQDSLTCLNGIKVLSIMWIIIGHIFVFKL 65          
BLAST of mRNA_H-canaliculatus_F_contig1088.818.1 vs. uniprot
Match: UPI000C76045D (nose resistant to fluoxetine protein 6-like isoform X1 n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C76045D)

HSP 1 Score: 52.0 bits (123), Expect = 3.430e-6
Identity = 25/48 (52.08%), Postives = 30/48 (62.50%), Query Frame = 1
Query:   40 LQCFSLVINTKSLLAPPRAG-DEFRCLEGVRTLSMMWVVLGHCFAYNV 180
            L CFS   N K LL+   +G D F CL G+R LSM WVVLGH F  ++
Sbjct:  190 LMCFSAYTNGKHLLSTKSSGQDHFNCLNGMRFLSMTWVVLGHSFGSSL 237          
BLAST of mRNA_H-canaliculatus_F_contig1088.818.1 vs. uniprot
Match: UPI001EE51248 (nose resistant to fluoxetine protein 6-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE51248)

HSP 1 Score: 51.2 bits (121), Expect = 6.410e-6
Identity = 24/56 (42.86%), Postives = 32/56 (57.14%), Query Frame = 1
Query:   16 WGRWILDRLQCFSLVINTKSLLAPPRAGDEFRCLEGVRTLSMMWVVLGHCFAYNVT 183
            W R +L    CFS V N + +L+  R+     CL G+R LSM WV+LGH F   +T
Sbjct:  190 WKRVLL----CFSAVSNGEKILSVKRSPGSLTCLNGIRVLSMSWVILGHTFLNLIT 241          
BLAST of mRNA_H-canaliculatus_F_contig1088.818.1 vs. uniprot
Match: A0A6P3D661_BOMTE (nose resistant to fluoxetine protein 6 isoform X1 n=6 Tax=Bombus terrestris TaxID=30195 RepID=A0A6P3D661_BOMTE)

HSP 1 Score: 51.2 bits (121), Expect = 6.440e-6
Identity = 19/49 (38.78%), Postives = 31/49 (63.27%), Query Frame = 1
Query:   28 ILDRLQCFSLVINTKSLLAPPRAGDEFRCLEGVRTLSMMWVVLGHCFAY 174
            I +RL CFS + N + +  P + GD  R   G++TL+M+W+++GH   Y
Sbjct:  289 ISERLLCFSFLNNVEKIFKPEKNGDNLRVFYGLKTLTMIWIIVGHIVFY 337          
BLAST of mRNA_H-canaliculatus_F_contig1088.818.1 vs. uniprot
Match: A0A6J3L848_9HYME (nose resistant to fluoxetine protein 6-like n=3 Tax=Pyrobombus TaxID=144703 RepID=A0A6J3L848_9HYME)

HSP 1 Score: 51.2 bits (121), Expect = 6.440e-6
Identity = 21/57 (36.84%), Postives = 32/57 (56.14%), Query Frame = 1
Query:    4 RKSNWGRWILDRLQCFSLVINTKSLLAPPRAGDEFRCLEGVRTLSMMWVVLGHCFAY 174
            R+S     I   L CFS + N K +  P + G+  R   G++TL+M+W++LGH   Y
Sbjct:  282 RESEQLNRISKHLLCFSFLTNVKEIFKPEKGGNNLRVFYGLKTLTMVWIILGHVVFY 338          
BLAST of mRNA_H-canaliculatus_F_contig1088.818.1 vs. uniprot
Match: A0A4C1YKU6_EUMVA (Nose resistant to fluoxetine protein 6 n=1 Tax=Eumeta variegata TaxID=151549 RepID=A0A4C1YKU6_EUMVA)

HSP 1 Score: 50.8 bits (120), Expect = 8.810e-6
Identity = 20/43 (46.51%), Postives = 30/43 (69.77%), Query Frame = 1
Query:   40 LQCFSLVINTKSLLAPPRAGDEFRCLEGVRTLSMMWVVLGHCF 168
            L CFS+  NT+ LL    + +   C++G+R++SMMWVV+GH F
Sbjct:  281 LCCFSIYTNTRRLLTFNESPETLECVDGIRSISMMWVVVGHTF 323          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1088.818.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7D7_ECTSI4.730e-2780.33Acyl_transf_3 domain-containing protein n=2 Tax=Ec... [more]
A0A7M5V8Z0_9CNID9.830e-734.48NRF domain-containing protein n=2 Tax=Clytia hemis... [more]
UPI001CB980091.840e-639.22nose resistant to fluoxetine protein 6-like isofor... [more]
UPI001CB940541.840e-640.82nose resistant to fluoxetine protein 6-like isofor... [more]
A0A482VP81_9CUCU3.300e-645.45Acyl_transf_3 domain-containing protein (Fragment)... [more]
UPI000C76045D3.430e-652.08nose resistant to fluoxetine protein 6-like isofor... [more]
UPI001EE512486.410e-642.86nose resistant to fluoxetine protein 6-like n=1 Ta... [more]
A0A6P3D661_BOMTE6.440e-638.78nose resistant to fluoxetine protein 6 isoform X1 ... [more]
A0A6J3L848_9HYME6.440e-636.84nose resistant to fluoxetine protein 6-like n=3 Ta... [more]
A0A4C1YKU6_EUMVA8.810e-646.51Nose resistant to fluoxetine protein 6 n=1 Tax=Eum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1088contigH-canaliculatus_F_contig1088:529..711 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score111.3
Seed ortholog evalue1.6e-22
Seed eggNOG ortholog2880.D7G7D7
EggNOG free text desc.transferase activity, transferring acyl groups
EggNOG OGsKOG3700@1,KOG3700@2759
COG Functional cat.V
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size183
Cds size183
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928755.5267732-CDS-H-canaliculatus_F_contig1088:528..7111622928755.5267732-CDS-H-canaliculatus_F_contig1088:528..711Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1088 529..711 -
1696845551.9807496-CDS-H-canaliculatus_F_contig1088:528..7111696845551.9807496-CDS-H-canaliculatus_F_contig1088:528..711Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1088 529..711 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1088.818.1prot_H-canaliculatus_F_contig1088.818.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1088 529..711 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1088.818.1

>prot_H-canaliculatus_F_contig1088.818.1 ID=prot_H-canaliculatus_F_contig1088.818.1|Name=mRNA_H-canaliculatus_F_contig1088.818.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=61bp
MRKSNWGRWILDRLQCFSLVINTKSLLAPPRAGDEFRCLEGVRTLSMMWV
VLGHCFAYNVT
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mRNA from alignment at H-canaliculatus_F_contig1088:529..711-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1088.818.1 ID=mRNA_H-canaliculatus_F_contig1088.818.1|Name=mRNA_H-canaliculatus_F_contig1088.818.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=183bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1088:529..711- (Hapterophycus canaliculatus Oshoro5f female)
ATGCGCAAGAGCAACTGGGGCCGCTGGATCCTCGACCGGCTGCAGTGCTT CTCCCTGGTGATCAACACCAAGAGCCTGCTGGCTCCGCCGCGGGCCGGGG ACGAGTTCCGCTGCCTCGAGGGAGTGAGGACGCTGTCCATGATGTGGGTG GTGCTCGGGCACTGCTTCGCCTACAACGTGACC
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1088:529..711-

>mRNA_H-canaliculatus_F_contig1088.818.1 ID=mRNA_H-canaliculatus_F_contig1088.818.1|Name=mRNA_H-canaliculatus_F_contig1088.818.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=366bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1088:529..711- (Hapterophycus canaliculatus Oshoro5f female)
ATGCGCAAGAGCAACTGGGGCCGCTGGATCCTCGACCGGCTGCAGTGCTT
CTCCCTGGTGATCAACACCAAGAGCCTGCTGGCTCCGCCGCGGGCCGGGG
ACGAGTTCCGCTGCCTCGAGGGAGTGAGGACGCTGTCCATGATGTGGGTG
GTGCTCGGGCACTGCTTCGCCTACAACGTGACCATGCGCAAGAGCAACTG
GGGCCGCTGGATCCTCGACCGGCTGCAGTGCTTCTCCCTGGTGATCAACA
CCAAGAGCCTGCTGGCTCCGCCGCGGGCCGGGGACGAGTTCCGCTGCCTC
GAGGGAGTGAGGACGCTGTCCATGATGTGGGTGGTGCTCGGGCACTGCTT
CGCCTACAACGTGACC
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