mRNA_H-canaliculatus_F_contig10879.817.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig10879.817.1

>prot_H-canaliculatus_F_contig10879.817.1 ID=prot_H-canaliculatus_F_contig10879.817.1|Name=mRNA_H-canaliculatus_F_contig10879.817.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=390bp
MPLSAASPAWATVEDGGEDGTVEQDIHRTNPLFSLPRAERERAGAPRRAG
GPRSGVGSRGRKAGGGRSGGGTAAATGAVAQPATAAEEKGRKIEESDDGG
GGGGGGGGGGSGGIKSEGFGSGARRHHVRASSLMAPPSSAPTQHRRSSSS
SSCSRRRSAAATELNAGTFQKPSHTAAAAAAEQRGAEGKQRPRGRSADGA
RPRALSRQSTKAASVAPGSSPTTPSLLLAVGTGFLQAGPLVAPGGRGGGG
DRRSVRRSSGIPLFPPSPEGGAAGRVPGRGATGSRRKAASSSTARRPLSW
SQYSPQRQPSASRTGAASPAAAAGGRSAGTGGSMPSSSCSWSGRSSSGSG
SSSSSRHSSGGGGGGGSTPSAPAEVEARRRRWFRRRRRR*
back to top

mRNA from alignment at H-canaliculatus_F_contig10879:885..4082-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig10879.817.1 ID=mRNA_H-canaliculatus_F_contig10879.817.1|Name=mRNA_H-canaliculatus_F_contig10879.817.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3198bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10879:885..4082- (Hapterophycus canaliculatus Oshoro5f female)
ACGCTCATCATCGTCATCACGATCCTCGGGAGCTTTATCTTCGTGGGCTT GCTCGTTTGCGCCTCTGTTTGGTACCTACGGAGCAACGGGACGGGCGGTG GCAGCGGCAGCGGCAGCGGCAGGGATCGCAGCTACGACCGCAAGGACAAG CGGCGGTCGACCCGAGGGGGAGGCGGCGGCGGCGGCGACGGCGGCGGGGG CGGGGGTGGGGGCAGGGATGGTGGCGAGGGCGGATCCCGGGCGGGACAGC CGCGGAAGCAGCGATCGTTTCGGCGGGCCTTCATGCCGCTCTCGGCGGCT TCGCCGGCGTGGGCTACTGTGGAGGACGGGGGTGAGGACGGGACCGTCGA GCAGGACATCCACCGCACGAACCCCCTGTTCAGCCTGCCGCGTGCAGAGC GGGAGAGGGCGGGGGCTCCGCGGAGAGCCGGCGGACCCCGGAGCGGCGTC GGCAGTCGGGGCCGCAAGGCGGGCGGGGGGAGGAGCGGTGGAGGCACGGC GGCGGCGACGGGAGCGGTGGCGCAGCCAGCAACAGCAGCAGAGGAAAAAG GAAGAAAAATCGAAGAAAGCGACGATGGCGGGGGCGGCGGGGGCGGCGGG GGCGGCGGAGGCAGCGGCGGCATCAAGTCCGAAGGTTTGTCGGCGTCCGA CCAGCGTAAGGCTCGAAACAGCCGCAGCAGCAGCAGCAGCAGCGGCGGCG GTAGCGGCAGCGGCAGCGGCGCGCGACGCCATCATGTGCGCGCCTCCTCT CTCATGGCCCCCCCGTCGAGCGCCCCCACGCAGCACCGGCGCTCTTCTTC TTCCTCCTCCTGCAGCCGGCGGCGATCGGCCGCCGCCACGGAGCTGAACG CAGGGACGTTCCAGAAGCCGTCTCACACCGCCGCCGCCGCCGCCGCCGAG CAGCGCGGCGCCGAGGGCAAGCAGCGCCCTCGCGGCAGGAGCGCCGACGG GGCGCGGCCGAGAGCGCTTTCGCGGCAGTCGACGAAAGCGGCGAGCGTAG CGCCAGGTTCAAGTCCCACGACGCCCAGCCTTCTGCTTGCGGTGGGAACC GGGTTCCTTCAGGCGGGACCTCTCGTCGCTCCTGGAGGCAGGGGCGGCGG CGGCGATCGAAGATCGGTGCGAAGGAGCAGCGGCATACCCCTGTTCCCCC CGTCGCCCGAGGGCGGAGCCGCCGGTAGAGTGCCCGGCAGGGGGGCGACG GGTTCTCGCAGAAAGGCCGCGTCCTCCTCCACCGCCCGGCGCCCCTTATC TTGGAGCCAATACTCGCCGCAGAGGCAGCCGTCCGCATCGCGAACTGGAG CCGCCTCTCCGGCGGCCGCCGCCGGCGGCCGCTCGGCGTCTCTGTCTCCT TCCTGGGGCAGCCGGGCTCACCGCTTCCTCGACCCGAACCCGCCTGACCT CGGCGGCGCGCACCTCTCCCCCCACCAGGAGCATCTGCGGCGCGGGCGCC ACTTCCCTCCTCAGCCGGAGCCTACGAGCGCGATTACCCCGGAGCGTGGT CCGCCTTCTCGCTCTGCCGGTCCCCCCACGTCGCGCTGGACCGTGTCGGC CGACCGCGGGAGAGGCGGCCGCCGTAGCAGCGGCGGCGGCGGCGGCGGCG AGGGGCGCGGGCTGGAGCGGCAGAGCAGTGCGTCCGCGGGCCGGGCGAGC TCGCGCTCCCCGCTGTCCCGGCGGAGCCGCCGGGTGAGGCCTTCCTCTCA TTCTCCTCCGAGGAGGAAGCACCCCGGCACTCCGACGAGGAGCGGAGGAG AGTGGTACTGGGGGGAGCATGCCGTCGAGCAGCTGCAGCTGGAGCGGCAG AAGCAGCAGCGGCAGCGGCAGCAGCAGCAGCAGCAGGCACAGCAGCGGCG GAGGCGGAGGCGGCGGCAGCACTCCTTCGGCTCCTGCGGAAGTGGAGGCA CGCCGACGTCGATGGTTTCGTCGTCGTCGTCGTCGTTGAAGCCGCCGCCC TCGCCGACGCAGGGCGTCTCTCTCTGGGCGGCGGCGGAATCGCTTGCGCT TTCCTCGGTGTTCCCCGTGGTGAGAGACGCCGCCAACCTCGTCGCCAACC TCGTGAAAGCGACCGGCGACCGTGCAACCGCCGGCGGCGGCGGTGGCGGG GCGGACAACGAAGCGAGGCACGGCGGGGAGTGCTGGGTCGGATGGTGCCG CTCCGCCGTGCAGACGCTGTGGAGGGCGGTCAACGTGCTACGGAAGGTGG GCGAGACGCGTGAGCGGTCAGAACAACGAGAAAACGCGGCAAGGGTCGCG CGCCGGCGTGGGGCGAAAAAGGCGGTGCCCCGTTGCCGTCTTGGTGTGGT TGTCTTGAGGTCGAGAACGACTTTGCTTGAAGTTCACCTGCGAGGGCATC TGTCGGCCTCTCACGCTCACGCTCGCGGCGTTTGTGCTCCTTGCCTATGC CATGTCCTCTGCCGTCGTGTCTTTGCGGACCCGACACGAGATCTCGAGTC CCTTCCAAGGAGAGAGGGAGACAGAAAAAAGATACTCTGTACCTCTCAGT TGAGCCCTGACCCGCGCCGGCGGTGTGCGCACATGTGCATGGTGCAAGGT TTGCGTGAACTAAGGGAGGAATGGTTTCGATCGGCGCGTGGCCCTTCTTG TTCTCGCGTGGTCGTGGTTCTCTCCGTTTTTTGCCCGAACCCAAACCCGA AACCCAACCCAACCCAACACGCCGAGGCAGGCGACGGCCCACGACGGCCA GGCGGAGCGCGTCCTGATGGAGGACGTGCAGGAGAGCATCTCCGAGATGA GCGAGATCATGCAGTCCTACGAGAGTAGGGGCTTCTCGGCTGGGGAGGTG TCGACCTCGGGACTCTGCGACCGTAGGCAGGGGGAGACGGAGGAGGCCAT CGCCTCGGCCTCGCAGCGTTTGCAGGTACGTCGTGGGCGGGCCCGTCCAC CAACCGAACGACTTTTTTACGCCCCTGTAACCGACCGACGATTGACGGAC GGCGCTCAACGAGCAGCTGTCTGAAGTGACCTCCTCCACCCACCGTATCT TCCTGCTCAGGAGGAGGGTGAGGTCAGGTCCCAAGCGCGGTAACGGAGTG CCCGCGTCGTGGCTGTTACTACCGTATGCGGTGGATGACGTATTTTCTGT CGTCCCCCTCCGCTGCCCGCGGTCTGCTTCCTTTGCTTCTTTTTTCGCTT CCCTTTCGCTGGCGGCAGCTGATCGAGAGAGTCCGCGCGGGTTACAGC
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10879:885..4082-

>mRNA_H-canaliculatus_F_contig10879.817.1 ID=mRNA_H-canaliculatus_F_contig10879.817.1|Name=mRNA_H-canaliculatus_F_contig10879.817.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2340bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10879:885..4082- (Hapterophycus canaliculatus Oshoro5f female)
ATGCCGCTCTCGGCGGCTTCGCCGGCGTGGGCTACTGTGGAGGACGGGGG
TGAGGACGGGACCGTCGAGCAGGACATCCACCGCACGAACCCCCTGTTCA
GCCTGCCGCGTGCAGAGCGGGAGAGGGCGGGGGCTCCGCGGAGAGCCGGC
GGACCCCGGAGCGGCGTCGGCAGTCGGGGCCGCAAGGCGGGCGGGGGGAG
GAGCGGTGGAGGCACGGCGGCGGCGACGGGAGCGGTGGCGCAGCCAGCAA
CAGCAGCAGAGGAAAAAGGAAGAAAAATCGAAGAAAGCGACGATGGCGGG
GGCGGCGGGGGCGGCGGGGGCGGCGGAGGCAGCGGCGGCATCAAGTCCGA
AGGTTTATGCCGCTCTCGGCGGCTTCGCCGGCGTGGGCTACTGTGGAGGA
CGGGGGTGAGGACGGGACCGTCGAGCAGGACATCCACCGCACGAACCCCC
TGTTCAGCCTGCCGCGTGCAGAGCGGGAGAGGGCGGGGGCTCCGCGGAGA
GCCGGCGGACCCCGGAGCGGCGTCGGCAGTCGGGGCCGCAAGGCGGGCGG
GGGGAGGAGCGGTGGAGGCACGGCGGCGGCGACGGGAGCGGTGGCGCAGC
CAGCAACAGCAGCAGAGGAAAAAGGAAGAAAAATCGAAGAAAGCGACGAT
GGCGGGGGCGGCGGGGGCGGCGGGGGCGGCGGAGGCAGCGGCGGCATCAA
GTCCGAAGGTTTCGGCAGCGGCGCGCGACGCCATCATGTGCGCGCCTCCT
CTCTCATGGCCCCCCCGTCGAGCGCCCCCACGCAGCACCGGCGCTCTTCT
TCTTCCTCCTCCTGCAGCCGGCGGCGATCGGCCGCCGCCACGGAGCTGAA
CGCAGGGACGTTCCAGAAGCCGTCTCACACCGCCGCCGCCGCCGCCGCCG
AGCAGCGCGGCGCCGAGGGCAAGCAGCGCCCTCGCGGCAGGAGCGCCGAC
GGGGCGCGGCCGAGAGCGCTTTCGCGGCAGTCGACGAAAGCGGCGAGCGT
AGCGCCAGGTTCAAGTCCCACGACGCCCAGCCTTCTGCTTGCGGTGGGAA
CCGGGTTCCTTCAGGCGGGACCTCTCGTCGCTCCTGGAGGCAGGGGCGGC
GGCGGCGATCGAAGATCGGTGCGAAGGAGCAGCGGCATACCCCTGTTCCC
CCCGTCGCCCGAGGGCGGAGCCGCCGGTAGAGTGCCCGGCAGGGGGGCGA
CGGGTTCTCGCAGAAAGGCCGCGTCCTCCTCCACCGCCCGGCGCCCCTTA
TCTTGGAGCCAATACTCGCCGCAGAGGCAGCCGTCCGCATCGCGAACTGG
AGCCGCCTCTCCGGCGGCCGCCGCCGGCGGCCGCTCGGCCGGCAGCGGCG
CGCGACGCCATCATGTGCGCGCCTCCTCTCTCATGGCCCCCCCGTCGAGC
GCCCCCACGCAGCACCGGCGCTCTTCTTCTTCCTCCTCCTGCAGCCGGCG
GCGATCGGCCGCCGCCACGGAGCTGAACGCAGGGACGTTCCAGAAGCCGT
CTCACACCGCCGCCGCCGCCGCCGCCGAGCAGCGCGGCGCCGAGGGCAAG
CAGCGCCCTCGCGGCAGGAGCGCCGACGGGGCGCGGCCGAGAGCGCTTTC
GCGGCAGTCGACGAAAGCGGCGAGCGTAGCGCCAGGTTCAAGTCCCACGA
CGCCCAGCCTTCTGCTTGCGGTGGGAACCGGGTTCCTTCAGGCGGGACCT
CTCGTCGCTCCTGGAGGCAGGGGCGGCGGCGGCGATCGAAGATCGGTGCG
AAGGAGCAGCGGCATACCCCTGTTCCCCCCGTCGCCCGAGGGCGGAGCCG
CCGGTAGAGTGCCCGGCAGGGGGGCGACGGGTTCTCGCAGAAAGGCCGCG
TCCTCCTCCACCGCCCGGCGCCCCTTATCTTGGAGCCAATACTCGCCGCA
GAGGCAGCCGTCCGCATCGCGAACTGGAGCCGCCTCTCCGGCGGCCGCCG
CCGGCGGCCGCTCGGCTGGTACTGGGGGGAGCATGCCGTCGAGCAGCTGC
AGCTGGAGCGGCAGAAGCAGCAGCGGCAGCGGCAGCAGCAGCAGCAGCAG
GCACAGCAGCGGCGGAGGCGGAGGCGGCGGCAGCACTCCTTCGGCTCCTG
CGGAAGTGGAGGCACGCCGACGTCGATGGTTTCGTCGTCGTCGTCGTCGT
TGATGGTACTGGGGGGAGCATGCCGTCGAGCAGCTGCAGCTGGAGCGGCA
GAAGCAGCAGCGGCAGCGGCAGCAGCAGCAGCAGCAGGCACAGCAGCGGC
GGAGGCGGAGGCGGCGGCAGCACTCCTTCGGCTCCTGCGGAAGTGGAGGC
ACGCCGACGTCGATGGTTTCGTCGTCGTCGTCGTCGTTGA
back to top