prot_H-canaliculatus_F_contig10867.812.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig10867.812.1
Unique Nameprot_H-canaliculatus_F_contig10867.812.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length640
Homology
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BLAST of mRNA_H-canaliculatus_F_contig10867.812.1 vs. uniprot
Match: D8LRC5_ECTSI (Cyclin_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRC5_ECTSI)

HSP 1 Score: 365 bits (937), Expect = 1.200e-114
Identity = 322/688 (46.80%), Postives = 362/688 (52.62%), Query Frame = 0 
Query:    1 MEPFDAELFVDRLVEDDEPLPW-RSEMSGADGGRPHHIWEAATHHTGSGSSAVHGGAKLFLQPVYSWPDQRQPXXXXXXXXXXXXXQPRPMCGDGVQHEPSQDMPIVIP---MFDTLFTPCRAMRPEQR----------LAVTSD---------FGFGSAGEARSGSNVFEFGP--VYNIPPPPE---TFAPPLQVPMAPLRQPSGGRLGGGLYPPGSGEMTL---RRPAG--------------EQHHDS---EFKYVANSDLVRGAASALPLTLTGADAHSSREYDDERYAFLRRQEAALFVGAGYLSTGAGRASGAEEAGISPAERASAVDWLSKLHSAAPAASGGARAVXXXXXXXXXXXXXXXXAGPRPTLKLAAAACLALSSKYQDTQAVSLWGVAAAAASVPGTFSASSATSVQNGATRGGDSGGPGVGSNGSSSNRNISGCDGGGDFFRVLGLGXXXXXXXXXXXXXXXXXXXNIDVGAARKKLVTMETQVASALGFRLTVPTPLSFLGVFLRRAETLGYLLQXXXXXXXXXXXXXERVREEAQQILLCMLREACSLEHSPSSLAACALYWASCVTSPGAAPPSSFAFLAVTGYELEQLCRCLRDMEGVRTGGGVGGGRH-GSGSFYASFSLLGXXXXXXXXXXXXXXXXXXDWAGAAFPEHAGNSLFGAGGGHPAIAAL 639
            MEPFDAE FVDRLVED  P  W R  + G  GGR   +WE                AKLF QPV+++ D+ QP         XXXX              SQDMP+++P   + D +FTPCRA+ P             +AVT           FG G   E      +  F P  +YNIPP      ++A  LQVPMAPLRQPSGGR      PP    M     R PA               E++ ++   EF                   LTGADAHSSREYDDER+AFLRRQEAAL  GA Y++ G           + PA R++AVDWLS+LH A      G   V                    P +KLA AACL L+SKYQD                                                             DFF VLG G     XXXXXXXXXXXXXXN DV AARK+L   E QVASALGFRLTVPT LSFLGVFLRRAE LGY+L              ERVR EA+QILLCMLRE+CSLEH PS+LAA ALYWASCVT+PGAAPP+SFAFLAVTGYELEQLC CLRDME VRTGGG    R+ G+GSF +  S   XXXXXXXXXXXX      DWAGAAFPEHA NSLFGAGGGHPAIAAL
Sbjct:    1 MEPFDAERFVDRLVEDPAPTAWGRGGLVGG-GGR---VWEXXXXXXXXXXXXXXXAAKLF-QPVFNF-DEHQPYLVGDGGGYXXXXXXXXXXXXXXXXXXSQDMPMIVPHDPILDAIFTPCRAVLPSTHHYHHPAEAAPVAVTCGLVRVPSGGRFGAGKKNE------IAAFRPELLYNIPPXXXXEVSYAASLQVPMAPLRQPSGGRRLYSSSPPRGRVMIQSAERSPAAAAARLVAVATYLNKEENSNNIPVEFSPSXXXXXXXXXXXXXXXPLTGADAHSSREYDDERHAFLRRQEAALAAGARYITGGVV---------VDPAARSAAVDWLSRLHGAKTVWGDGGGGVLLLG----------------PAVKLAGAACLVLASKYQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------XXXXXXXXXXXDFFGVLGAGDSLGLXXXXXXXXXXXXXXNADVRAARKELAATEMQVASALGFRLTVPTSLSFLGVFLRRAEGLGYVLADGPGR--------ERVRREAEQILLCMLRESCSLEHPPSALAASALYWASCVTTPGAAPPTSFAFLAVTGYELEQLCCCLRDMEAVRTGGGR---RYDGAGSFASCSSPAAXXXXXXXXXXXX------DWAGAAFPEHADNSLFGAGGGHPAIAAL 618
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10867.812.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LRC5_ECTSI1.200e-11446.80Cyclin_C domain-containing protein n=2 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004367Cyclin, C-terminal domainSMARTSM01332Cyclin_C_2coord: 462..592
e-value: 1.9E-7
score: 40.7
IPR004367Cyclin, C-terminal domainPFAMPF02984Cyclin_Ccoord: 462..567
e-value: 1.4E-7
score: 31.6
NoneNo IPR availableGENE3D1.10.472.10coord: 450..571
e-value: 4.8E-13
score: 51.4
IPR039361CyclinPANTHERPTHR10177CYCLINEcoord: 325..567
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 445..568

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10867contigH-canaliculatus_F_contig10867:525..2519 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10867.812.1mRNA_H-canaliculatus_F_contig10867.812.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig10867 525..2519 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig10867.812.1 ID=prot_H-canaliculatus_F_contig10867.812.1|Name=mRNA_H-canaliculatus_F_contig10867.812.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=640bp
MEPFDAELFVDRLVEDDEPLPWRSEMSGADGGRPHHIWEAATHHTGSGSS
AVHGGAKLFLQPVYSWPDQRQPPPQQQQQQQQQEQQPRPMCGDGVQHEPS
QDMPIVIPMFDTLFTPCRAMRPEQRLAVTSDFGFGSAGEARSGSNVFEFG
PVYNIPPPPETFAPPLQVPMAPLRQPSGGRLGGGLYPPGSGEMTLRRPAG
EQHHDSEFKYVANSDLVRGAASALPLTLTGADAHSSREYDDERYAFLRRQ
EAALFVGAGYLSTGAGRASGAEEAGISPAERASAVDWLSKLHSAAPAASG
GARAVCGGGGGGLRGGGGGGGAGPRPTLKLAAAACLALSSKYQDTQAVSL
WGVAAAAASVPGTFSASSATSVQNGATRGGDSGGPGVGSNGSSSNRNISG
CDGGGDFFRVLGLGGGGGGENSSSSCGGGGDDDNIDVGAARKKLVTMETQ
VASALGFRLTVPTPLSFLGVFLRRAETLGYLLQQQQAAGGGAGSAAERVR
EEAQQILLCMLREACSLEHSPSSLAACALYWASCVTSPGAAPPSSFAFLA
VTGYELEQLCRCLRDMEGVRTGGGVGGGRHGSGSFYASFSLLGGGGGGGG
GGGIGGGGGGGDWAGAAFPEHAGNSLFGAGGGHPAIAAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036915Cyclin-like_sf
IPR039361Cyclin
IPR004367Cyclin_C-dom