prot_H-canaliculatus_F_contig10046.80.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig10046.80.1
Unique Nameprot_H-canaliculatus_F_contig10046.80.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length121
Homology
BLAST of mRNA_H-canaliculatus_F_contig10046.80.1 vs. uniprot
Match: D8LGI7_ECTSI (TIP120 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGI7_ECTSI)

HSP 1 Score: 164 bits (415), Expect = 1.380e-44
Identity = 76/83 (91.57%), Postives = 80/83 (96.39%), Query Frame = 0
Query:   39 YLPGILDAFEKSVKHQYLLLSSLKEVIVCHATTPGLDFSPFVDQVLPHLFQHCTSDEEGVRNMVAECLGALTSMHPQKLVPEL 121
            YLPGILDAFE+SVKHQYLLLSSLKEVIVCHA TPGL+F P+VDQVLPHLFQHCTSDEEGVRNMVAECLG LTSMHPQ+LVPEL
Sbjct:  835 YLPGILDAFERSVKHQYLLLSSLKEVIVCHANTPGLEFGPYVDQVLPHLFQHCTSDEEGVRNMVAECLGVLTSMHPQRLVPEL 917          
BLAST of mRNA_H-canaliculatus_F_contig10046.80.1 vs. uniprot
Match: A0A836CDP2_9STRA (Armadillo-type protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDP2_9STRA)

HSP 1 Score: 120 bits (300), Expect = 3.630e-29
Identity = 61/84 (72.62%), Postives = 67/84 (79.76%), Query Frame = 0
Query:   39 YLPGILDAFEKSVKHQYLLLSSLKEVIVCHATT-PGLDFSPFVDQVLPHLFQHCTSDEEGVRNMVAECLGALTSMHPQKLVPEL 121
            YLP +LDA E S +HQYLLLSSLKEVIVCHA   P LDFS  +DQVLPHLF HC S EEGVRNMVA CLGAL +MHP ++VP L
Sbjct:  261 YLPVVLDALE-STRHQYLLLSSLKEVIVCHARARPPLDFSAALDQVLPHLFGHCQSPEEGVRNMVAACLGALATMHPDRVVPAL 343          
BLAST of mRNA_H-canaliculatus_F_contig10046.80.1 vs. uniprot
Match: A0A7S2CRP2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CRP2_9STRA)

HSP 1 Score: 115 bits (289), Expect = 3.430e-28
Identity = 54/83 (65.06%), Postives = 67/83 (80.72%), Query Frame = 0
Query:   39 YLPGILDAFEKSVKHQYLLLSSLKEVIVCHATTPGLDFSPFVDQVLPHLFQHCTSDEEGVRNMVAECLGALTSMHPQKLVPEL 121
            YLP IL++   + +H YLLLS+LKEVI+ HA T GLDF P+++QVLPHL +HC S EEGVRNMVAECLGAL +MHP+ +VP L
Sbjct:  100 YLPVILESLNAN-RHHYLLLSALKEVILLHANTTGLDFGPYIEQVLPHLLKHCESAEEGVRNMVAECLGALITMHPEVIVPAL 181          
BLAST of mRNA_H-canaliculatus_F_contig10046.80.1 vs. uniprot
Match: A0A7S2UZY3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZY3_9STRA)

HSP 1 Score: 106 bits (264), Expect = 1.720e-26
Identity = 50/70 (71.43%), Postives = 60/70 (85.71%), Query Frame = 0
Query:   52 KHQYLLLSSLKEVIVCHATTPGLDFSPFVDQVLPHLFQHCTSDEEGVRNMVAECLGALTSMHPQKLVPEL 121
            + QYLLL++LKEVI+ HA T GLDFS +V+ VLPHL++HC S EEGVRNMVAECLGALTSMHP++LV  L
Sbjct:    5 RQQYLLLAALKEVIMYHACTAGLDFSLYVEMVLPHLYRHCESPEEGVRNMVAECLGALTSMHPEQLVSGL 74          
BLAST of mRNA_H-canaliculatus_F_contig10046.80.1 vs. uniprot
Match: A0A7S2FNG9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FNG9_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 1.370e-20
Identity = 50/82 (60.98%), Postives = 60/82 (73.17%), Query Frame = 0
Query:   40 LPGILDAFEKSVKHQYLLLSSLKEVIVCHATTPGLDFSPFVDQVLPHLFQHCTSDEEGVRNMVAECLGALTSMHPQKLVPEL 121
            LP IL    +S +H YLLLS+LKEV+V HATT   DF  ++DQV+PHL +H  S EEGVRNMVAECLGAL +MH   +VP L
Sbjct:  897 LPLILTYMARS-RHHYLLLSALKEVLVLHATT-SQDFGSYIDQVIPHLLKHGQSPEEGVRNMVAECLGALITMHADSIVPML 976          
BLAST of mRNA_H-canaliculatus_F_contig10046.80.1 vs. uniprot
Match: A0A7R9VF31_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VF31_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 1.510e-19
Identity = 46/90 (51.11%), Postives = 61/90 (67.78%), Query Frame = 0
Query:   39 YLPGILDAFEKS-VKHQYLLLSSLKEVIVCHAT------TPGLDFSPFVDQVLPHLFQHCTSDEEGVRNMVAECLGALTSMHPQKLVPEL 121
            +LP ILDA E++  K QYLLLS+L+E+I CH            D SP +  +LPHLF+HC  +EEGVR MVAECLG+LT + P  ++P+L
Sbjct:  221 FLPAILDALEENREKKQYLLLSALRELIHCHQLGGXXXXXSAADISPSIPLILPHLFKHCADEEEGVRTMVAECLGSLTCLQPAVILPQL 310          
BLAST of mRNA_H-canaliculatus_F_contig10046.80.1 vs. uniprot
Match: A0A7S3V7P0_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V7P0_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 2.260e-19
Identity = 45/84 (53.57%), Postives = 58/84 (69.05%), Query Frame = 0
Query:   39 YLPGILDAFEKSVKH-QYLLLSSLKEVIVCHATTPGLDFSPFVDQVLPHLFQHCTSDEEGVRNMVAECLGALTSMHPQKLVPEL 121
            +LP ILDA EK+ K+ QYLLL++L+E+I CH    G D SP + Q+LPHL  H    EEGVR MVA+CLG L  + P  ++PEL
Sbjct: 1089 FLPNILDALEKNDKNKQYLLLAALRELIYCHQQGFGGDISPSIQQILPHLKTHLADKEEGVRTMVADCLGCLACLEPDVILPEL 1172          
BLAST of mRNA_H-canaliculatus_F_contig10046.80.1 vs. uniprot
Match: A0A7S2QZD8_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2QZD8_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 2.940e-18
Identity = 44/84 (52.38%), Postives = 55/84 (65.48%), Query Frame = 0
Query:   39 YLPGILDAFE-KSVKHQYLLLSSLKEVIVCHATTPGLDFSPFVDQVLPHLFQHCTSDEEGVRNMVAECLGALTSMHPQKLVPEL 121
            +LP IL A E KS K QYLLLS+L+E+I CH    G D +  +  +LPHL  HC   EEGVR MVAECLG+L  + P  ++P L
Sbjct:   53 FLPAILGALEDKSQKDQYLLLSALRELIHCHQLGGGSDIAASIPLILPHLITHCGDKEEGVRTMVAECLGSLVCLQPDVVLPSL 136          
BLAST of mRNA_H-canaliculatus_F_contig10046.80.1 vs. uniprot
Match: A0A7S2N4P0_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N4P0_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 3.430e-18
Identity = 46/87 (52.87%), Postives = 59/87 (67.82%), Query Frame = 0
Query:   39 YLPGILDAFEK-SVKHQYLLLSSLKEVIVCHATTPGL---DFSPFVDQVLPHLFQHCTSDEEGVRNMVAECLGALTSMHPQKLVPEL 121
            +LP ILDA E+ S K QYLLLS+L+E+I C+ T  G    D S  V  +LPHL  HC+  EEGVR MVAEC+G+LT + P  ++P L
Sbjct:  243 FLPAILDALEQNSQKKQYLLLSALRELIHCYQTGGGAGGGDISSSVPLILPHLVNHCSDKEEGVRTMVAECMGSLTCLEPDVMLPRL 329          
BLAST of mRNA_H-canaliculatus_F_contig10046.80.1 vs. uniprot
Match: A0A0K9RK16_SPIOL (TIP120 domain-containing protein n=5 Tax=Chenopodiaceae TaxID=1804623 RepID=A0A0K9RK16_SPIOL)

HSP 1 Score: 87.8 bits (216), Expect = 9.310e-18
Identity = 46/84 (54.76%), Postives = 56/84 (66.67%), Query Frame = 0
Query:   38 RYLPGILDAFEKSVKHQYLLLSSLKEVIVCHATTPGLDFSPFVDQVLPHLFQHCTSDEEGVRNMVAECLGALTSMHPQKLVPEL 121
            +YLP ILD  +   K QYLLL SLKEVIV  +T      +  VD++L  LF HC S+EEGVRN+VAECLG +  + P KLVP L
Sbjct:  886 KYLPFILDQIDHQQKKQYLLLHSLKEVIVRQSTDKAEFQASSVDKILNLLFNHCESEEEGVRNVVAECLGKVALIEPTKLVPAL 969          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10046.80.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGI7_ECTSI1.380e-4491.57TIP120 domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A836CDP2_9STRA3.630e-2972.62Armadillo-type protein (Fragment) n=1 Tax=Tribonem... [more]
A0A7S2CRP2_9STRA3.430e-2865.06Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2UZY3_9STRA1.720e-2671.43Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S2FNG9_9STRA1.370e-2060.98Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7R9VF31_9STRA1.510e-1951.11Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S3V7P0_9STRA2.260e-1953.57Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2QZD8_9STRA2.940e-1852.38Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S2N4P0_9STRA3.430e-1852.87Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A0K9RK16_SPIOL9.310e-1854.76TIP120 domain-containing protein n=5 Tax=Chenopodi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 21..121
e-value: 2.0E-25
score: 90.9
NoneNo IPR availablePANTHERPTHR12696:SF0CULLIN-ASSOCIATED NEDD8-DISSOCIATED PROTEIN 1coord: 38..121
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..121
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..17
score: 0.551
NoneNo IPR availableTMHMMTMhelixcoord: 15..34
IPR039852Cullin-associated NEDD8-dissociated protein 1/2PANTHERPTHR12696TIP120coord: 38..121
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 24..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10046contigH-canaliculatus_F_contig10046:3813..4870 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10046.80.1mRNA_H-canaliculatus_F_contig10046.80.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig10046 3574..4870 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig10046.80.1 ID=prot_H-canaliculatus_F_contig10046.80.1|Name=mRNA_H-canaliculatus_F_contig10046.80.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=121bp
MLIVLVLLSLLLPSKLSLFPSAAVLSFTLLLLLFGTRRYLPGILDAFEKS
VKHQYLLLSSLKEVIVCHATTPGLDFSPFVDQVLPHLFQHCTSDEEGVRN
MVAECLGALTSMHPQKLVPEL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR039852CAND1/CAND2
IPR011989ARM-like