mRNA_H-canaliculatus_F_contig1082.778.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1082.778.1 vs. uniprot
Match: D7G8Q2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8Q2_ECTSI) HSP 1 Score: 609 bits (1570), Expect = 1.410e-208 Identity = 312/376 (82.98%), Postives = 335/376 (89.10%), Query Frame = 2 Query: 83 MFNTSVATALGQIPDDEAWHRTIILPTDILDNPPSGEHEVDWETESSHRIWGCELLQEAGVLLRLPQVVMCTAQNLLQRFFYRKSLAKFDAFSVAMGCMLLAMKIEEDPRQPRAVVLVFHRMFERRMGVEPSEVIPPESLRALRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLRVLELDIEGDVSQRAWNYINDSLRTDLSLRFRSEVIACAAIYMASRSLGIKLPDNPPWWVLFNADMQEMGEICNTILALYHRPKVTFLEPLCRNSVFRRGGPLRKDAVVEDTQEVYTPADGIDEDPSPSPSQEPQADDPGPHGADESSAVVA-PVNNSSVSIANS-PEAPTSSDTHVRESNGSEPNVSHKGPDGESESR 1204 M + SVA LGQIPDDEAWHRTIILP DILDNPPSGEHEVDWETESSHRIWGCELLQEAGVLLRLPQVVMCTAQNLLQRFFYRK L KFDAFSVAMGCMLLAMKIEEDPRQPRAVVLVFHRMFERR+GV+P+ VIPPESLR LRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLRVLELDIEGDVSQRAWNY+NDSLRTDLSLRFRSEVIACAAIYMASRSLGIKLPDNPPWWVLFNADMQEMGEICNTILALYHRPKV FLEPLC NSVFRRGGPLR DAVV++ QEVY PADG++E P+ +PS+ D+P + SAVVA PV N+SVS+AN+ PEAP SD H +SNG+E ++K + ES+SR Sbjct: 43 MADGSVARTLGQIPDDEAWHRTIILPRDILDNPPSGEHEVDWETESSHRIWGCELLQEAGVLLRLPQVVMCTAQNLLQRFFYRKPLTKFDAFSVAMGCMLLAMKIEEDPRQPRAVVLVFHRMFERRIGVDPAIVIPPESLRVLRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLRVLELDIEGDVSQRAWNYVNDSLRTDLSLRFRSEVIACAAIYMASRSLGIKLPDNPPWWVLFNADMQEMGEICNTILALYHRPKVAFLEPLCDNSVFRRGGPLRIDAVVQNIQEVYAPADGVEETPAAAPSETQPGDEPCTRDSVSVSAVVAEPVCNNSVSVANNTPEAPGPSDVHEPDSNGAEEPSTNKSQERESDSR 418
BLAST of mRNA_H-canaliculatus_F_contig1082.778.1 vs. uniprot
Match: A0A835YUR3_9STRA (Cyclin-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUR3_9STRA) HSP 1 Score: 356 bits (913), Expect = 1.650e-112 Identity = 173/270 (64.07%), Postives = 214/270 (79.26%), Query Frame = 2 Query: 131 EAWHRTIILPTDILDNPPSGEHEVDWETESSHRIWGCELLQEAGVLLRLPQVVMCTAQNLLQRFFYRKSLAKFDAFSVAMGCMLLAMKIEE--DPRQPRAVVLVFHRMFERRMGVEPSEVIPPESL--RALRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLRVLELDIEGDVSQRAWNYINDSLRTDLSLRFRSEVIACAAIYMASRSLGIKLPDNPPWWVLFNADMQEMGEICNTILALYHRPKVTFLEPLCRNSVFRRGGPLRK 928 E WH ++LP +IL NPPS +H VDWETE+ HR WGCEL+QEAG+LLRLPQVVMCT Q LLQRF+YRKSL KFDAFSVAMGC+LLA K+EE + R VV+VFHRM+ RR G+ P E + L+ EM+RVE +VLK+LGFGFYNIMDHPHKFILYY+RVL ++E +QR W+Y+ND+LRTDL LR+R+EVIACAAIYMA+R+L ++LP +PPWW LFNA++ E+G+ICN ILALY +PKV +LEPL SVF GG +R+ Sbjct: 1 EPWHSVVLLPEEILANPPSKDHGVDWETETQHRAWGCELIQEAGILLRLPQVVMCTGQTLLQRFYYRKSLTKFDAFSVAMGCVLLAAKLEEAIGHTRVRDVVMVFHRMYLRRRGL-PLEFLELGGTVYAELKTEMIRVERYVLKDLGFGFYNIMDHPHKFILYYVRVLGWELEA--TQRVWSYLNDALRTDLCLRYRAEVIACAAIYMAARALRLRLPQSPPWWRLFNAELPEIGQICNAILALYKKPKVVWLEPLHSGSVFAPGGAVRR 267
BLAST of mRNA_H-canaliculatus_F_contig1082.778.1 vs. uniprot
Match: A0A7S4D4U7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D4U7_HETAK) HSP 1 Score: 309 bits (792), Expect = 1.170e-94 Identity = 149/263 (56.65%), Postives = 194/263 (73.76%), Query Frame = 2 Query: 131 EAWHRTIILPTDILDNPPSGEHEVDWETESSHRIWGCELLQEAGVLLRLPQVVMCTAQNLLQRFFYRKSLAKFDAFSVAMGCMLLAMKIEEDPRQPRAVVLVFHRMFERRMG--VEPSEVIPPESLRALRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLRVLELDIEGDVSQRAWNYINDSLRTDLSLRFRSEVIACAAIYMASRSLGIKLPDNPPWWVLFNADMQEMGEICNTILALYHRPKVTFLEPLCRNSVFRRG 913 E WH LP +ILDN PS + V WE E R+WGCEL+QEAGVLLRLPQVVM T QNLLQRFFYR+SL +FDAF+VAMGC+ L+ K+EE P++ R ++ VFH + + R G + P E + ++ + E++++E HVLKELGF FYNIMDHPHKFILYY++VL D ++QRAW+Y+NDSLRTDL LR + VIACAAIYMA+R L + LP +PPWW LF+A ++++ IC+ ILALY K ++EPL +VF+RG Sbjct: 33 EPWHMVQTLPAEILDNSPSKKDGVPWEQEYKFRVWGCELVQEAGVLLRLPQVVMATGQNLLQRFFYRRSLKRFDAFTVAMGCLFLSCKVEEKPKRLREILFVFHHISQVRRGEPITPLE-LGAQTYMQWKSELIKMERHVLKELGFSFYNIMDHPHKFILYYIKVL--DGSSALAQRAWSYVNDSLRTDLCLRHGAAVIACAAIYMAARVLRVPLPRSPPWWELFSAQLRDVAAICDAILALYEMEKTPWMEPLSEANVFKRG 292
BLAST of mRNA_H-canaliculatus_F_contig1082.778.1 vs. uniprot
Match: W7U1X8_9STRA (Ania-6a type cyclin n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1X8_9STRA) HSP 1 Score: 276 bits (707), Expect = 1.550e-79 Identity = 146/287 (50.87%), Postives = 186/287 (64.81%), Query Frame = 2 Query: 110 LGQIPDDEAWHRTIILPTDILDNPPSGEHEVDWETESSHRIWGCELLQEAGVLLRLPQVVMCTAQNLLQRFFYRKSLAK-------------------FDAFSVAMGCMLLAMKIEEDPRQPRAVVLVFHRMFERRMGVEPSEVIPPESLRA--LRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLRVLELDIEGDVSQRAWNYINDSLRTDLSLRFRSEVIACAAIYMASRSLGIKLPDNPPWWVLFNADMQEMGEICNTILALYHRPK-------VTFLEPL 886 L + D WH ++LP +L PS V E HRI+GCEL+QEAG+LLR PQVVM TAQ L RFFYR++L FDAF+VAMGC+ LA K+EE PR PR V+ VFH M RR G+ PS ++ S+R LR+ +L +E +VLKELGFGFY+IMDHPHKFILYY++ L D ++QRAWNY+NDSLR D +RFR+E+IAC A+YMASR LG+KLPD+PPW+ LF A ++EM + N IL+LY + +LEPL Sbjct: 33 LEDVSVDGEWHEVVLLPRHVLRESPSRRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRALTSERAQDVPEPGPGKSPRVFLFDAFTVAMGCVFLASKLEEKPRAPRDVLFVFHHMCRRRRGLGPS-LLEVTSVRYHDLREALLMIEKYVLKELGFGFYSIMDHPHKFILYYIKTL--DGTPTLAQRAWNYLNDSLRLDCCVRFRAELIACTALYMASRDLGVKLPDDPPWFALFGASLEEMRHVGNVILSLYREKDEEGEEAPLRWLEPL 316
BLAST of mRNA_H-canaliculatus_F_contig1082.778.1 vs. uniprot
Match: F0YGC1_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGC1_AURAN) HSP 1 Score: 251 bits (641), Expect = 1.910e-74 Identity = 123/238 (51.68%), Postives = 167/238 (70.17%), Query Frame = 2 Query: 152 ILPTDILDNPPSGEHEVDWETESSHRIWGCELLQEAGVLLRLPQVVMCTAQNLLQRFFYRKSLAKFDAFSVAMGCMLLAMKIEEDPRQPRAVVLVFHRMFERRMGVEPSEVIPPESLRALRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLRVLELDIEGDVSQRAWNYINDSLRTDLSLRFRSEVIACAAIYMASRSLGIKLPDNP--PWWVLFNADMQEMGEICNTILALYHR 859 +LP D+L+N PS V E + R+WGCEL+QEAG+LLRLPQVVMCT QN+ QRF+YR SL +FDAF AMGC LA KIEE P++ R ++VFH ++ R + + + E+++VE H+LKELGF FY I+DH HKFIL+Y+++L+ D G+++Q AW+Y+ND LRTD +LR+RSEV+ACAAIYMA+R L KLPD+P PWW +F ++ + +LALY R Sbjct: 2 LLPADMLENSPSKRDGVSAADEYAQRVWGCELIQEAGILLRLPQVVMCTGQNIFQRFYYRVSLKRFDAFLSAMGCFFLACKIEEKPKRLRECLMVFHFVYRVRTKSSATLELGGVRYNGWKHELVKVERHILKELGFSFY-IIDHSHKFILFYVKLLDCD--GELAQEAWSYLNDCLRTDAALRYRSEVLACAAIYMAARRLQHKLPDDPAAPWWEVFRVGKADLDAVVAAVLALYVR 236
BLAST of mRNA_H-canaliculatus_F_contig1082.778.1 vs. uniprot
Match: A0A3F2S4S2_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S4S2_9STRA) HSP 1 Score: 250 bits (638), Expect = 7.890e-73 Identity = 126/284 (44.37%), Postives = 186/284 (65.49%), Query Frame = 2 Query: 149 IILPTDILDNPPSGEHEVDWETESSHRIWGCELLQEAGVLLRLPQVVMCTAQNLLQRFFYRKSLAKFDAFSVAMGCMLLAMKIEEDPRQPRAVVLVFHRMFERRMG---VEPSEVIPPE--SLRALRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLRVLELDIEGDVSQRAWNYINDSLRTDLSLRFRSEVIACAAIYMASRSLGIKLPDNPPWWVLFNADMQEMGEICNTILALYHRPKVTFLEPLCRNSVFRRGG-PLRKDAVVEDTQEVYTPADGID 982 ++LP +L PS + +D TE HR +GCEL+QEAGVLLRLPQVVM TAQ L QRF+YRKSL +FDAF VA+ C+ LA K+EE P++ + V+ VF+ M RR V +++ + + R ++ VE VL ++GF YN+ +HPHK++LYY++VL D ++QRAW YINDSLR+DL +R+ ++VIAC+AI++ASR G+ LP+NPPW+ LF + Q++ + I+ LY + K+ +LEPL + F P+ + +VE + P + I+ Sbjct: 9 VVLPASVLTRSPSSQDGIDPSTEHQHRFFGCELIQEAGVLLRLPQVVMATAQTLFQRFYYRKSLRQFDAFRVAISCLFLAAKVEERPKRIKDVLTVFYAMLRRRKWKRTVVSQQLVDLDGATYSQWRMWLIMVERQVLIDMGFSVYNVTEHPHKYVLYYVKVL--DGSSQLAQRAWGYINDSLRSDLCVRYSAQVIACSAIFLASRYQGVALPENPPWYSLFGVNKQQLYAVSVAIMELYKQEKIEWLEPLTETNPFAVDDHPVEEQLIVESVVKTGAPNEKIE 290
BLAST of mRNA_H-canaliculatus_F_contig1082.778.1 vs. uniprot
Match: W2R3U0_PHYPN (Uncharacterized protein (Fragment) n=11 Tax=Phytophthora TaxID=4783 RepID=W2R3U0_PHYPN) HSP 1 Score: 248 bits (632), Expect = 4.300e-71 Identity = 129/277 (46.57%), Postives = 186/277 (67.15%), Query Frame = 2 Query: 149 IILPTDILDNPPSGEHEVDWETESSHRIWGCELLQEAGVLLRLPQVVMCTAQNLLQRFFYRKSLAKFDAFSVAMGCMLLAMKIEEDPRQPRAVVLVFHRMFERRM---GVEPSEVIPPE--SLRALRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLRVLELDIEGDVSQRAWNYINDSLRTDLSLRFRSEVIACAAIYMASRSLGIKLPDNPPWWVLFNADMQEMGEICNTILALYHRPKVTFLEPLCRNSVFRRGG-PLRKDA-VVEDTQEV 958 ++LP L PS E ++ + E HR +GCEL+QEAGVLLRLPQVVM TAQ LLQRF+YRKSL +FDAF VA+ C+ LA K+EE P++ + VV VF+ MF RR +++ + + R ++ VE VL +LGF Y++ +HPHK++LYY++VL D ++Q+AW YINDSLRTDL +R++++VIACAAI++ASR G+ LP+NPPW++LF+ D ++ + I+ LY + K+ +LEPL + F P+ ++ VVE QE Sbjct: 10 VVLPASSLARSPSLEDDIKPDIERLHRSFGCELIQEAGVLLRLPQVVMATAQTLLQRFYYRKSLRQFDAFRVAVSCLFLAAKVEEKPKRIKDVVGVFYAMFRRRKWQRSTVSQQLVDLDGATFSQWRMWLIMVERQVLIDLGFSIYSVTEHPHKYVLYYVKVL--DGSSALAQQAWGYINDSLRTDLCVRYKAQVIACAAIFLASRFQGVALPENPPWYLLFDVDKTQLYAVSVVIMELYKQEKIQWLEPLTETNPFEVDDHPMEEEEEVVEQVQET 284
BLAST of mRNA_H-canaliculatus_F_contig1082.778.1 vs. uniprot
Match: A0A484EGW5_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EGW5_BRELC) HSP 1 Score: 244 bits (622), Expect = 5.870e-70 Identity = 127/276 (46.01%), Postives = 179/276 (64.86%), Query Frame = 2 Query: 149 IILPTDILDNPPSGEHEVDWETESSHRIWGCELLQEAGVLLRLPQVVMCTAQNLLQRFFYRKSLAKFDAFSVAMGCMLLAMKIEEDPRQPRAVVLVFHRMFERRMGVEPSEV-----IPPESLRALRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLRVLELDIEGDVSQRAWNYINDSLRTDLSLRFRSEVIACAAIYMASRSLGIKLPDNPPWWVLFNADMQEMGEICNTILALYHRPKVTFLEPLCRNSVFRRGG-PLRKDAVVEDTQEV 958 ++LPT L PS E V+ + E HR +GCEL+QEAGVLLRLPQVVM TAQ LLQRF+YRKSL +FDAF VA C+ LA K+EE+P + + V+ VF+ MF RR + + + R ++ VE +L +LGF Y++ +HPHK++LYY +VL D ++Q+AW YINDSLRTDL +R+++EVIACAAI++ASR GI LP NPPW+ LF+ + ++ + I LY + K+ +LEPL + F PL+++ ++ V Sbjct: 10 VVLPTSSLSRSPSNEDGVNPDIEVLHRFFGCELIQEAGVLLRLPQVVMATAQTLLQRFYYRKSLRQFDAFRVAFSCLFLAAKVEENPTRIKDVIGVFYAMFRRRKWQRSTVAQQLIDLDGTTFNQWRMWLIMVERQILIDLGFSIYSVTEHPHKYVLYYAKVL--DGSSALAQQAWGYINDSLRTDLCVRYKAEVIACAAIFLASRFQGIALPYNPPWYSLFDVEQAQLYAVSLVIAKLYKQEKLQWLEPLTEANPFAIDDHPLKEEDEAQEQNSV 283
BLAST of mRNA_H-canaliculatus_F_contig1082.778.1 vs. uniprot
Match: A0A225WJ87_9STRA (Cyclin-L1 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WJ87_9STRA) HSP 1 Score: 242 bits (617), Expect = 6.050e-70 Identity = 121/257 (47.08%), Postives = 172/257 (66.93%), Query Frame = 2 Query: 149 IILPTDILDNPPSGEHEVDWETESSHRIWGCELLQEAGVLLRLPQVVMCTAQNLLQRFFYRKSLAKFDAFSVAMGCMLLAMKIEEDPRQPRAVVLVFHRMFERRMGVEPSEV-----IPPESLRALRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLRVLELDIEGDVSQRAWNYINDSLRTDLSLRFRSEVIACAAIYMASRSLGIKLPDNPPWWVLFNADMQEMGEICNTILALYHRPKVTFLEPLCRNSVF 904 ++LP L PS E + +TE HR +GCEL+QEAGVLLRLPQVV+ TAQ LL RF+YRKSL +FDAF VA+ C+ LA K+EE P++ + V+ VF+ M RR + + + R ++ VE VL +LGF YN+ +HPHK++LYY++VL D ++Q+AW YINDSLRTDL +R++++VIACAAI++ASR G+ LP+NPPW+ LF+ + ++ + I+ LY + KV +LEPL + F Sbjct: 8 VVLPASSLQRSPSLEDGISSDTERLHRSFGCELIQEAGVLLRLPQVVLATAQTLLHRFYYRKSLRQFDAFRVAVSCLFLAAKVEEKPKRIKDVLGVFYAMLRRRKWRRTTVTQQLVDVDGATFSQWRMWLIMVERQVLIDLGFSVYNVTEHPHKYVLYYVKVL--DGSSTLAQQAWGYINDSLRTDLCVRYKAQVIACAAIFLASRFQGVALPENPPWYSLFDVEKTQLYAVSVAIMQLYKQEKVEWLEPLTETNPF 262
BLAST of mRNA_H-canaliculatus_F_contig1082.778.1 vs. uniprot
Match: A0A8K1CU74_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CU74_PYTOL) HSP 1 Score: 251 bits (640), Expect = 1.450e-69 Identity = 126/257 (49.03%), Postives = 175/257 (68.09%), Query Frame = 2 Query: 149 IILPTDILDNPPSGEHEVDWETESSHRIWGCELLQEAGVLLRLPQVVMCTAQNLLQRFFYRKSLAKFDAFSVAMGCMLLAMKIEEDPRQPRAVVLVFHRMFERRMGVEP---SEVIPPES--LRALRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLRVLELDIEGDVSQRAWNYINDSLRTDLSLRFRSEVIACAAIYMASRSLGIKLPDNPPWWVLFNADMQEMGEICNTILALYHRPKVTFLEPLCRNSVF 904 ++LP IL PS + V E HR WGCEL++EAG+LLRLPQVVM TAQ +LQRF+YRKSL FDAF VA+GC+ LA K+EE P++ R VV VF+ ++ RR + +++ PES D ++ VE +L +LGF Y IM+HPHK+ILYY+++L D ++Q+AW Y+NDSLR DL +R+R+EVIACAAI++ASR L +KLP +PPW+ LF+ D + + I+ LY R K+ +L+PL + F Sbjct: 9 VVLPEAILARSPSQQDGVSAHEERDHRFWGCELIEEAGILLRLPQVVMVTAQTMLQRFYYRKSLRDFDAFRVAIGCLFLAAKVEEQPKRMREVVSVFYAIYRRRKWGKTRMTQQLLEPESDSYYLWCDWLIMVERQILIDLGFSLYTIMEHPHKYILYYIKIL--DGSKALAQKAWGYLNDSLRVDLCVRYRAEVIACAAIFLASRMLQVKLPMSPPWFELFDVDETALLQASTVIMELYTRKKIVWLDPLTEVNPF 263 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1082.778.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1082.778.1 >prot_H-canaliculatus_F_contig1082.778.1 ID=prot_H-canaliculatus_F_contig1082.778.1|Name=mRNA_H-canaliculatus_F_contig1082.778.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=491bp MFNTSVATALGQIPDDEAWHRTIILPTDILDNPPSGEHEVDWETESSHRIback to top mRNA from alignment at H-canaliculatus_F_contig1082:23864..29246+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1082.778.1 ID=mRNA_H-canaliculatus_F_contig1082.778.1|Name=mRNA_H-canaliculatus_F_contig1082.778.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=5383bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1082:23864..29246+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1082:23864..29246+ >mRNA_H-canaliculatus_F_contig1082.778.1 ID=mRNA_H-canaliculatus_F_contig1082.778.1|Name=mRNA_H-canaliculatus_F_contig1082.778.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2946bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1082:23864..29246+ (Hapterophycus canaliculatus Oshoro5f female)back to top |