mRNA_H-canaliculatus_F_contig10041.75.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig10041.75.1
Unique NamemRNA_H-canaliculatus_F_contig10041.75.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig10041.75.1 vs. uniprot
Match: D7FWD5_ECTSI (PX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWD5_ECTSI)

HSP 1 Score: 679 bits (1753), Expect = 7.450e-235
Identity = 435/626 (69.49%), Postives = 461/626 (73.64%), Query Frame = 1 
Query:   25 TQGRSLYFTPRETLIFGYLFDLADTDDDGLVGANDGGHALLGRARLPPSTLQRLWSEAGGESPEECLARPQWFVLLALVALAQAGLPCTLRDLLHTCDVLSAPKSPHTQAFQQHPGGSXXXXXXXXXSAGRLRPIPDFFLDGGIPPPPPLAHPSSSPASPTHGAAGGPAGLAQALPASAGGR-QHQRPGGKAGRGRSTVGLPGSGGQQHQGKVVGAWDYYGGGGAGGS---GW-DQGSSEHAPAGPGRGAGEEDGYQLEVTVYSHRVVGEGYGSHTEYTVLANASLPGFARREMEVARRFSDFRWLHSCFQAIPGVLPPPLPPSKWAGSSSRDFVAERMKGLQRYMTRVAEHPILSRNYAFQVFLEGTPRGLRAAKALLPARIPGSGGAHG---SAAWGDTFSPSMAGGGGTPVSPALSSSPGTTPPDESAGVGFVRRRFSLGGADDMCVPGXXXXXXXXXXXXXXXXVLAGGVPGARQGQRRSVSFXXXXXXXXXXXXXXXGALVVRGAGGWTGSGASWPLSVVANAGYEAYGNYVSTSVSTSLTSIKGVLGAVKTKAKSAVGLGAGPAPIAVEQDPLYEAEVARIEELVAPVTGAVKIMESAAVLKRGVGYEMSRLGHYLTQVS 1878
            TQGRSLYFTPRET+IFGYLFDLADTDDDGLVG NDGGHALLGR+RLP STLQRLW+EAGGESP+ECLARPQWFVL+ALVALAQAG PCTLRDLL+TCDV+S   S             XXXXXXXXX    LRPIPDF                 + A PT  A       A+A PA  G    ++ P G +G+G  T  +PGS G Q              GGAG S   GW ++G                +G QLEVTVYSHRVVGEGYGSHTEYTVLANASLPGFARREMEVARRFSDFRWLHSCFQAIPGVL PPLPPSKWAGSSSRDFVAERMKGLQRYMTRVA+HPILSR+Y FQVFLEGTPRGLRAAKALLPAR+PG  G +    SAAWGDTFSPSMAG GGTPVSPALSS+P TTPPDES   GFVRRRF+LGGADDM    XXXXXXXX   XXXXX         RQGQRRSVSF               G        GWTGS     LSVVAN GYEAY NYVSTSVSTSLTSIKGVLGAVKT+AKSAVGLGAGPAPIAVE DPLYEAEVARIEELVAPV G+VKIMESAAVLKRGVGYEMSRLGHYLTQV+
Sbjct:    5 TQGRSLYFTPRETVIFGYLFDLADTDDDGLVGGNDGGHALLGRSRLPQSTLQRLWAEAGGESPDECLARPQWFVLVALVALAQAGRPCTLRDLLNTCDVVS---SAXXXXXXXXXXXXXXXXXXXXXXXRLLRPIPDFXXXXXXXXXXXXXXXXXA-AVPTMIAEA----AAEACPAGVGTTGANKHPRGMSGKGGRTADVPGSRGGQR-------------GGAGASEQSGWREEGXXXXXXX-------XXEGGQLEVTVYSHRVVGEGYGSHTEYTVLANASLPGFARREMEVARRFSDFRWLHSCFQAIPGVLVPPLPPSKWAGSSSRDFVAERMKGLQRYMTRVAQHPILSRHYVFQVFLEGTPRGLRAAKALLPARVPGGCGGNNNNASAAWGDTFSPSMAGAGGTPVSPALSSTPSTTPPDES---GFVRRRFTLGGADDMYXXXXXXXXXXXVDGXXXXXXXI------RQGQRRSVSFGASSDESLCNGAAGGGQ-----GPGWTGSA----LSVVANVGYEAYENYVSTSVSTSLTSIKGVLGAVKTRAKSAVGLGAGPAPIAVEPDPLYEAEVARIEELVAPVAGSVKIMESAAVLKRGVGYEMSRLGHYLTQVA 584
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BLAST of mRNA_H-canaliculatus_F_contig10041.75.1 vs. uniprot
Match: A0A6H5KCW0_9PHAE (PX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCW0_9PHAE)

HSP 1 Score: 635 bits (1638), Expect = 6.740e-211
Identity = 395/625 (63.20%), Postives = 420/625 (67.20%), Query Frame = 1 
Query:   25 TQGRSLYFTPRETLIFGYLFDLADTDDDGLVGANDGGHALLGRARLPPSTLQRLWSEAGGESPEECLARPQWFVLLALVALAQAGLPCTLRDLLHTCDVLSAPKSPHTQAFQQHPGGSXXXXXXXXXSAGRL-RPIPDFFLDGGIPPPPPLAHPSSSPASPTHGAAGGPAGLAQALPA---SAGGRQHQRPGGKAGRGRSTVGLPGSGGQQHQGKVVGAWDYYGGGGAGGSGWDQGSSEHAPAGPGRGAGEEDGYQLEVTVYSHRVVGEGYGSHTEYTVLANASLPGFARREMEVARRFSDFRWLHSCFQAIPGVLPPPLPPSKWAGSSSRDFVAERMKGLQRYMTRVAEHPILSRNYAFQVFLEGTPRGLRAAKALLPARIPGSGGA---HGSAAWGDTFSPSMAGGGGTPVSPALSSSPGTTPPDESAGVGFVRRRFSLGGADDMCVPGXXXXXXXXXXXXXXXXVLAGGVPGARQGQRRSVSFXXXXXXXXXXXXXXXGALVVRGAGGWTGSGASWPLSVVANAGYEAYGNYVSTSVSTSLTSIKGVLGAVKTKAKSAVGLGAGPAPIAVEQDPLYEAEVARIEELVAPVTGAVKIMESAAVLKRGVGYEMSRLGHYLTQVS 1878
            T+GRSLYFTPRET+IFGYLFDLADTDDDGLVG NDGGHALLGR+RLP STLQRLW+EAGGESP+ECLARPQWFVL+ALVALAQAG PCTLRDLL+TCDV+S+  +P            XXXXXXXXX AGRL RPIPDFFLDG                 PT  A       A+A PA   + G  +H R  G +G+   T  +PGS G Q                                          G QLEVTVYSHRVVGEGYGSHTEYTVLANASLPGFARREMEVARRFSDFRWLHSCFQAIPGVL PPLPPSKWAGSSSRDFVAERMKGLQRYMTRVA+HPILSR+Y FQVFLEGTPRGLRAAKALLPAR+PG  G    + SAAWGDTFSPSMAG GG PVSPALSS+P TTPPDE+   GFVRRRF+LGGADDM                                                                                 YEAY NYVSTSVSTSLTSIKGVLGAVKTKAKSAVGLGAGPAPIAVE DPLYEAEVARIEELVAPV G+VKIMESAAVLKRGVGYEMSRLGHYLTQV+
Sbjct:   20 TEGRSLYFTPRETVIFGYLFDLADTDDDGLVGGNDGGHALLGRSRLPQSTLQRLWAEAGGESPDECLARPQWFVLVALVALAQAGRPCTLRDLLNTCDVVSSASAPLPXXXXXX---XXXXXXXXXXXAGRLLRPIPDFFLDGXXXXXXXXXXXXXXXXVPTMIAEA----AAEACPAGVETTGASKHAR--GMSGKAGRTADVPGSRGGQXXXXXX-----------------XXXXXXXXXXXXXXXXXXXGGQLEVTVYSHRVVGEGYGSHTEYTVLANASLPGFARREMEVARRFSDFRWLHSCFQAIPGVLVPPLPPSKWAGSSSRDFVAERMKGLQRYMTRVAQHPILSRHYVFQVFLEGTPRGLRAAKALLPARVPGGCGGKNNNASAAWGDTFSPSMAGAGGMPVSPALSSTPSTTPPDEA---GFVRRRFTLGGADDM---------------------------------------------------------------------------------YEAYENYVSTSVSTSLTSIKGVLGAVKTKAKSAVGLGAGPAPIAVEPDPLYEAEVARIEELVAPVAGSVKIMESAAVLKRGVGYEMSRLGHYLTQVA 534
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BLAST of mRNA_H-canaliculatus_F_contig10041.75.1 vs. uniprot
Match: A0A507DH53_9FUNG (PX domain-containing protein n=2 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507DH53_9FUNG)

HSP 1 Score: 77.0 bits (188), Expect = 5.130e-11
Identity = 41/112 (36.61%), Postives = 56/112 (50.00%), Query Frame = 1 
Query:  775 YQLEVTVYSHRVVGEGYGSHTEYTVLANASLPGFARREMEVARRFSDFRWLHS-CFQAIPGVLPPPLPPSKWAGSSSRDFVAERMKGLQRYMTRVAEHPILSRNYAFQVFLE 1107
            + LE+ V     V +   SH  YTV      P F    + V RR+ DF WL S      PG++ PP+P     G    DFV  R   L+R++ R+A HPILS    F++FL+
Sbjct:  226 WNLEICVGDPMKVSDPLSSHIVYTVKTKTECPAFRSSNLAVVRRYRDFLWLFSQLLTKYPGIVIPPVPEKHALGRFQDDFVENRRASLERFLKRIASHPILSSEDDFRLFLQ 337
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BLAST of mRNA_H-canaliculatus_F_contig10041.75.1 vs. uniprot
Match: A8QAA9_MALGO (PX domain-containing protein n=1 Tax=Malassezia globosa (strain ATCC MYA-4612 / CBS 7966) TaxID=425265 RepID=A8QAA9_MALGO)

HSP 1 Score: 76.6 bits (187), Expect = 8.140e-11
Identity = 41/113 (36.28%), Postives = 63/113 (55.75%), Query Frame = 1 
Query:  778 QLEVTVYSHRVVGEGYGSHTEYTVLANASLPGFARREMEVARRFSDFRWLHSCF-QAIPGVLPPPLPPSKWAGSSSRDFVAERMKGLQRYMTRVAEHPILSRNYAFQVFLEGT 1113
            +  V V   + VG+   +H  YTV    + P FAR E+ V RR+SDFRWLH+      PGV+ PP+P     G  + + V  R + L+R + ++  HP+L R+   ++FLE +
Sbjct:  428 EFTVRVGDPQRVGDPVTAHVVYTVRLTTNAPWFARSELSVLRRYSDFRWLHAAMVHNHPGVVVPPIPEKVKLGRFAPELVEFRRRSLERALHKILLHPMLQRDDDLKLFLESS 540
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BLAST of mRNA_H-canaliculatus_F_contig10041.75.1 vs. uniprot
Match: A0A061S8W9_9CHLO (Sorting nexin-1/2 n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S8W9_9CHLO)

HSP 1 Score: 73.6 bits (179), Expect = 4.110e-10
Identity = 40/103 (38.83%), Postives = 56/103 (54.37%), Query Frame = 1 
Query:  814 GEGYGSHTEYTVLANASLPGFARREMEVARRFSDFRWLHSCFQAIP-GVLPPPLPPSKWAG--SSSRDFVAERMKGLQRYMTRVAEHPILSRNYAFQVFLEGT 1113
            G+G G++  Y V     L  F   E EV RR+ DF WL    Q+   GV  P +P        S++ DF+  R +GLQ ++ +VAEHP+L  N   Q+FLEG+
Sbjct:   77 GDGVGAYVSYKVWTKTRLQQFKNSENEVIRRYKDFDWLFHRLQSTNRGVFVPAIPEKNAVSKISATTDFIEGRRRGLQSFINKVAEHPVLKYNSTLQLFLEGS 179
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BLAST of mRNA_H-canaliculatus_F_contig10041.75.1 vs. uniprot
Match: A9UXR8_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UXR8_MONBE)

HSP 1 Score: 72.8 bits (177), Expect = 6.000e-10
Identity = 41/119 (34.45%), Postives = 62/119 (52.10%), Query Frame = 1 
Query:  781 LEVTVYSHRVVGEGYGSHTEYTVLANASLPGFARREMEVARRFSDFRWLHSCF-QAIPGVLPPPLPPS----------KWAGSSSRDFVAERMKGLQRYMTRVAEHPILSRNYAFQVFL 1104
            LE++V   + +G+G GS+  Y +    ++ GFA+   EV  R+SDF  L+    +  PG+L PP PP           K  G     F+ +R   L+R+M R+A HPIL  +  F+ FL
Sbjct:   45 LEISVSDPQRIGDGMGSYMVYNLNTKTTMKGFAQPSFEVQHRYSDFHALYKYLVEKYPGLLVPPPPPKSAVGTGMMKFKSQGDEVTPFIEQRQFALERFMQRIAAHPILRSDDVFKTFL 163
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BLAST of mRNA_H-canaliculatus_F_contig10041.75.1 vs. uniprot
Match: A0A0L0T1G3_ALLM3 (PX domain-containing protein n=2 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0T1G3_ALLM3)

HSP 1 Score: 72.4 bits (176), Expect = 1.450e-9
Identity = 41/110 (37.27%), Postives = 60/110 (54.55%), Query Frame = 1 
Query:  781 LEVTVYSHRVVGEGYGSHTEYTVLANASLPGFARREMEVARRFSDFRWLHS-CFQAIPGVLPPPLPPSKWAGSSSRDFVAERMKGLQRYMTRVAEHPILSRNYAFQVFLE 1107
             +VTV     +G+     T Y V+   + PGF R E  V+RR+S+F WL+       PG++ P  P  +  G  S  FV  R  GLQ ++ +VA HP+L  + AFQ+F+E
Sbjct:  297 FKVTVSEPTKIGDAMSPFTAYKVVTKTTQPGF-RSESVVSRRYSEFLWLYQRLVTQHPGIVVPGTPEKQAIGRFSEGFVEHRRVGLQVFLRKVAAHPVLRTDPAFQMFVE 405
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BLAST of mRNA_H-canaliculatus_F_contig10041.75.1 vs. uniprot
Match: A0A1V9ZNJ5_9STRA (PX domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZNJ5_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.930e-8
Identity = 45/118 (38.14%), Postives = 61/118 (51.69%), Query Frame = 1 
Query:  811 VGEGYGSHTEYTVLANASLPGFARREMEVARRFSDFRWLHSCF-QAIPGVLPPPLPPSKWAGSSSRDFVAERMKGLQRYMTRVAEHPILSRNYAFQVFLEGTPRGLRAAKALLPARIP 1161
            +G+G  ++  Y V ++   P  A    EV RRFSDF WLH+   +A PG + PPLP        S++F+  R +GLQ+++T VA H ILS    F  FL  T   L   KA      P
Sbjct:   10 IGDGVNAYHVYPVRSSTDGPIVA----EVDRRFSDFAWLHATLLKACPGCIVPPLPAKVVGLLHSKEFLEARRQGLQKFLTNVAGHDILSSAPCFSSFLCATNIELSQLKARAKDAAP 123
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BLAST of mRNA_H-canaliculatus_F_contig10041.75.1 vs. uniprot
Match: A0A1X7UV49_AMPQE (PX domain-containing protein n=4 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7UV49_AMPQE)

HSP 1 Score: 68.6 bits (166), Expect = 1.960e-8
Identity = 42/127 (33.07%), Postives = 64/127 (50.39%), Query Frame = 1 
Query:  769 DGYQLEVTVYSHRVVGEGYGSHTEYTVLANASLPGFARREMEVARRFSDFRWLH----SCFQAIPGVLPPPLPPSKWAG----------SSSRDFVAERMKGLQRYMTRVAEHPILSRNYAFQVFLE 1107
            D Y+L +TV     VG+G G++  Y V    +LP F   E+ V RRFSDF  L+      F  + G + PP P     G           +S  F+  R   L+R++ R+A HP++ ++  F++FLE
Sbjct:  144 DQYELTITVAEPEKVGDGMGAYMTYLVTTKTTLPSFKEPEVFVRRRFSDFLGLYYRLSEKFMCM-GYIVPPAPEKSVTGMTKIKFSKNEENSALFIQRRRANLERFLNRLAIHPVIRKDEDFKMFLE 269
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BLAST of mRNA_H-canaliculatus_F_contig10041.75.1 vs. uniprot
Match: A0A096P7L0_OSTTA (Arfaptin homology (AH) domain/BAR domain n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A096P7L0_OSTTA)

HSP 1 Score: 67.8 bits (164), Expect = 2.860e-8
Identity = 41/114 (35.96%), Postives = 63/114 (55.26%), Query Frame = 1 
Query:  781 LEVTVYSHRVVGEGYGSHTEYTVLAN---ASLPGFARREMEVARRFSDFRWLHSCFQAI-PGVLPPPLPPSKWAGSSSR-DFVAERMKGLQRYMTRVAEHPILSRNYAFQVFLE 1107
            ++VTV +   VG+G  ++  YTV A    A   G+ + E  V RR+SDF+WL      + PG++  PLP      S  + DF+  R +GL+ +M +V EHP+L+      +FLE
Sbjct:   40 IDVTVTNPTKVGDGLAAYAVYTVSAKKTTADAAGYKKDESIVVRRYSDFQWLRGRLSTLFPGIVLFPLPEKTVTTSPFQSDFLEHRRRGLETFMRKVVEHPVLATCEDVVMFLE 153
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10041.75.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWD5_ECTSI7.450e-23569.49PX domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5KCW0_9PHAE6.740e-21163.20PX domain-containing protein n=1 Tax=Ectocarpus sp... [more]
A0A507DH53_9FUNG5.130e-1136.61PX domain-containing protein n=2 Tax=Synchytrium e... [more]
A8QAA9_MALGO8.140e-1136.28PX domain-containing protein n=1 Tax=Malassezia gl... [more]
A0A061S8W9_9CHLO4.110e-1038.83Sorting nexin-1/2 n=2 Tax=Tetraselmis sp. GSL018 T... [more]
A9UXR8_MONBE6.000e-1034.45Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]
A0A0L0T1G3_ALLM31.450e-937.27PX domain-containing protein n=2 Tax=Allomyces mac... [more]
A0A1V9ZNJ5_9STRA1.930e-838.14PX domain-containing protein n=1 Tax=Achlya hypogy... [more]
A0A1X7UV49_AMPQE1.960e-833.07PX domain-containing protein n=4 Tax=Amphimedon qu... [more]
A0A096P7L0_OSTTA2.860e-835.96Arfaptin homology (AH) domain/BAR domain n=2 Tax=O... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10041contigH-canaliculatus_F_contig10041:71..5149 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score684.9
Seed ortholog evalue3.6e-194
Seed eggNOG ortholog2880.D7FWD5
EggNOG free text desc.phosphatidylinositol binding
EggNOG OGsCOG5391@1,KOG2527@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons6
Model size1880
Cds size1878
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10041.75.1prot_H-canaliculatus_F_contig10041.75.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig10041 71..5149 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928632.5380967-CDS-H-canaliculatus_F_contig10041:70..1611622928632.5380967-CDS-H-canaliculatus_F_contig10041:70..161Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10041 71..161 -
1696845504.0930974-CDS-H-canaliculatus_F_contig10041:70..1611696845504.0930974-CDS-H-canaliculatus_F_contig10041:70..161Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10041 71..161 -
1622928632.5501683-CDS-H-canaliculatus_F_contig10041:1109..13101622928632.5501683-CDS-H-canaliculatus_F_contig10041:1109..1310Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10041 1110..1310 -
1696845504.106724-CDS-H-canaliculatus_F_contig10041:1109..13101696845504.106724-CDS-H-canaliculatus_F_contig10041:1109..1310Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10041 1110..1310 -
1622928632.5598474-CDS-H-canaliculatus_F_contig10041:1740..22311622928632.5598474-CDS-H-canaliculatus_F_contig10041:1740..2231Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10041 1741..2231 -
1696845504.126761-CDS-H-canaliculatus_F_contig10041:1740..22311696845504.126761-CDS-H-canaliculatus_F_contig10041:1740..2231Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10041 1741..2231 -
1622928632.569338-CDS-H-canaliculatus_F_contig10041:2827..30171622928632.569338-CDS-H-canaliculatus_F_contig10041:2827..3017Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10041 2828..3017 -
1696845504.1418197-CDS-H-canaliculatus_F_contig10041:2827..30171696845504.1418197-CDS-H-canaliculatus_F_contig10041:2827..3017Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10041 2828..3017 -
1622928632.5797284-CDS-H-canaliculatus_F_contig10041:3673..43691622928632.5797284-CDS-H-canaliculatus_F_contig10041:3673..4369Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10041 3674..4369 -
1696845504.1517134-CDS-H-canaliculatus_F_contig10041:3673..43691696845504.1517134-CDS-H-canaliculatus_F_contig10041:3673..4369Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10041 3674..4369 -
1622928632.5901604-CDS-H-canaliculatus_F_contig10041:4940..51491622928632.5901604-CDS-H-canaliculatus_F_contig10041:4940..5149Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10041 4941..5149 -
1696845504.1617813-CDS-H-canaliculatus_F_contig10041:4940..51491696845504.1617813-CDS-H-canaliculatus_F_contig10041:4940..5149Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10041 4941..5149 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig10041.75.1

>prot_H-canaliculatus_F_contig10041.75.1 ID=prot_H-canaliculatus_F_contig10041.75.1|Name=mRNA_H-canaliculatus_F_contig10041.75.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=626bp
TRSGTPQRTQGRSLYFTPRETLIFGYLFDLADTDDDGLVGANDGGHALLG
RARLPPSTLQRLWSEAGGESPEECLARPQWFVLLALVALAQAGLPCTLRD
LLHTCDVLSAPKSPHTQAFQQHPGGSGGGGGGNSGSAGRLRPIPDFFLDG
GIPPPPPLAHPSSSPASPTHGAAGGPAGLAQALPASAGGRQHQRPGGKAG
RGRSTVGLPGSGGQQHQGKVVGAWDYYGGGGAGGSGWDQGSSEHAPAGPG
RGAGEEDGYQLEVTVYSHRVVGEGYGSHTEYTVLANASLPGFARREMEVA
RRFSDFRWLHSCFQAIPGVLPPPLPPSKWAGSSSRDFVAERMKGLQRYMT
RVAEHPILSRNYAFQVFLEGTPRGLRAAKALLPARIPGSGGAHGSAAWGD
TFSPSMAGGGGTPVSPALSSSPGTTPPDESAGVGFVRRRFSLGGADDMCV
PGGGAGGVSTAMTTAGGLVLAGGVPGARQGQRRSVSFGGSSDESSSHNGG
PGGALVVRGAGGWTGSGASWPLSVVANAGYEAYGNYVSTSVSTSLTSIKG
VLGAVKTKAKSAVGLGAGPAPIAVEQDPLYEAEVARIEELVAPVTGAVKI
MESAAVLKRGVGYEMSRLGHYLTQVS
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mRNA from alignment at H-canaliculatus_F_contig10041:71..5149-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig10041.75.1 ID=mRNA_H-canaliculatus_F_contig10041.75.1|Name=mRNA_H-canaliculatus_F_contig10041.75.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=5079bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10041:71..5149- (Hapterophycus canaliculatus Oshoro5f female)
ACACGCTCCGGCACACCGCAACGAACGCAGGGGCGAAGCTTATACTTCAC
CCCTCGGGAAACGCTCATCTTCGGCTACCTGTTTGATCTGGCCGACACGG
ACGACGACGGTCTGGTCGGCGCAAACGATGGAGGCCACGCGCTCCTCGGA
CGGGCGCGCCTGCCGCCGTCCACCCTGCAGCGCCTGTGGTCTGAGGCCGG
GGGGGAAAGGTGAGCGCGTCGCTGTGCATCGCCTTGGGTTGGGTGGCCTT
GCCTTGCCTTGCCTCGCCTTGCCTTGCCTTGCCTCGCCTTGCCTTGCCTT
GCCTCGCCTCGCCTCGCCTCGCCTTGCCTTGCCTTGCCATCCCATGCCTT
GCCTTGCCTTGCCTTGCTTTGCTTTGCCTTGCCTTGCCTTCCCTTGCCTT
GCCATCCCATGCCTTGCCATGCCTTTTCTTGCGTTGCCTTGGCTTCCGTG
GCGCAGTCCTGGTCTCTTCTGTCGTTGGGTTGCACCGCAGTCGGTCTTTC
CGGAGGGTCGTTCGAAACCTTGTGAACATTATCCAATTGTTTGCTACCCT
TGCCGACCCCTCCGGCCACGATCGATCGAGCCAGTGGAGTCTAGCGTGGA
TTTGCACACGCTCCCTCTCCCCTCCTTCCTCCATTTCAGTCGGGTCTCCT
TCTCTTTCATCCCCCTTGTCTCTATGGCTCCCTACCCCCTGCCCCCTTCT
CGGTGCTCGCTTCCCGTCACTTGTCACTGGTGCTTATCCACCCCCCCCCC
CATTGTTCTCGTCCGCATGCCACGTGGCAGTCCCGAGGAGTGCTTGGCGC
GCCCCCAGTGGTTCGTCCTCCTAGCGCTCGTGGCGCTGGCCCAGGCCGGG
CTTCCGTGCACCCTGCGCGACCTGCTCCACACCTGCGACGTTTTGTCCGC
GCCCAAGTCTCCGCACACCCAAGCGTTTCAGCAGCACCCAGGTGGCAGCG
GCGGCGGCGGCGGCGGCAACAGCGGCAGTGCGGGACGGCTGCGCCCTATC
CCCGATTTCTTCCTGGACGGAGGCATCCCTCCCCCTCCCCCTCTCGCCCA
TCCCTCGTCGTCGCCCGCATCGCCTACTCACGGAGCAGCCGGGGGTCCCG
CAGGATTGGCGCAGGCCCTCCCAGCATCGGCTGGGGGAAGACAGCACCAG
CGTCCAGGAGGCAAAGCCGGACGCGGAAGAAGCACCGTGGGCCTCCCCGG
ATCGGGAGGGCAACAACACCAAGGAAAAGTAGTCGGGGCATGGGATTACT
ACGGGGGAGGCGGTGCGGGCGGGAGTGGATGGGACCAGGGGAGCAGCGAG
CATGCTCCGGCCGGGCCCGGGCGGGGCGCCGGCGAGGAGGACGGTTACCA
ACTGGAGGTGACGGTGTACAGCCACCGGGTGGTGGGGGAAGGCTACGGCA
GCCACACGGAGTACACGGTGCTGGCGAACGCCTCCCTCCCGGGGTTCGCG
AGAAGGGAGATGGAGGTGGCTCGAAGGTGAGGGGGCGCCGTGGAGGAAGA
GAGGGAGTAGGGTCGTCTTAAGGCGAGAGGATCGCTGTGGCGAGGTAGGC
AGGTAGTGCGAGTGTTCCAGGGGGGGCCAGGGGGAGGGAGGGAGGGTGGT
GGAGAGGGTCGCGTGGCAACCACCCTGCGTTGTGTCGGTTGCGGTCGCGG
CTGATGGGGAGTTTGCGGCGGGGTGTCGGCAAGCTGAATGCGAGAGCGAT
GTCGGAGGCGCGGGGTGCCTGTACTGTCTGGCCGGCCACCGGCGGTCTCC
GGTGGGTTTACCGCGGGGACGACAGCTTGGTCGTCCAGCTTGACGTCCCA
GCCCTATGCTCTGGGGGAGGAACGGGACAGCTTTTTGTAGGGCCGTCGGC
CGTAAGGAAGTGCTTGGCAGCGCCGTTTGCGATGAGAAGGACAGAGTTGT
TTTTTTGCTCTACCGCTCGTGGTTCTTGGTGCGTGCTTGGCCCAAGTTTC
ACGAGACGCGTGGCTTCGAGGGCGGATCGGCGGGTGGCGCCAAGCTGTGC
CTGTCCGGAGCCTTGAACCATGCTCCCCTTCGCTTTAAAATAAAAACCTC
AACGGCGGGGACGATTTGAAACACGCCCGCTACGCTATCGCCTCTTTTGG
AACCCTCTCCCCCCCCCTCTCTCTCTCCCTAGGTTCAGCGACTTCCGCTG
GCTCCACAGCTGCTTTCAGGCAATCCCGGGAGTGCTACCCCCGCCGCTCC
CTCCATCAAAGTGGGCGGGCAGCAGCAGCCGAGACTTCGTGGCAGAGCGC
ATGAAGGGCCTGCAGCGGTACATGACACGGGTGGCGGAGCACCCGATTCT
GAGCCGAAACTACGCCTTCCAGGTGCGTTTTTTTTTTGTGTTTTCCTTTT
TTTCCACTTACGAAGGAGAGCAACATGCACGGAACTATCTCCCCTGAGAC
AGAGTATAGCGACTCGGGGGAAATATGTTGAATTGCTCACAGGGAGGGTT
CAACGGTTGGCGGGACAAGAACATCATTAGACGCAGATGTTTTTTTTTCT
TTACAAAGAAAAAAAAAGAGTGAACAATACGGGACACCCTTCGATTCGGG
AGGAATCTGTTGAACTTCTTACGGCGAAGGTTGAGCGCGTTGGACAGGAT
AAAAACGTCAAGAGAGAAGTAGGCCCCCATCAACTCCAGGTCGCGGCAAA
CAGCGCCTTTCGGTCCGAATTCGTGGGCGGTGGTGAATTGTTGATCCTTT
CGCAGATCCCCGTTTCGTAGATGTTGCCCACGATCGGTGGCGAAGCCCTT
CCTTCATTCCTCGGGTCTCCGACGCACCCAGCGGATCTGAAGAACGAAAA
AAATCGGAAGTGCTGTACACGAAAAGCACGCCCATCAAATCAACTAGACC
TACCCGCGTTCACGCACATCTATCAACGAGGACCACGACAACGAAAAACT
CCATCTCGACCCCAACAGGTGTTTCTAGAGGGTACGCCGCGAGGCCTGAG
AGCTGCCAAGGCCCTCCTGCCGGCCAGGATCCCCGGCAGCGGTGGTGCCC
ACGGGAGCGCCGCCTGGGGTGACACCTTCAGCCCCTCCATGGCGGGCGGG
GGCGGGACGCCGGTAAGCCCCGCCCTGTCGTCCTCCCCGGGCACGACGCC
CCCGGACGAGTCGGCCGGGGTAGGGTTCGTTCGTAGGCGTTTTTCCCTGG
GAGGGGCAGACGACATGTGCGTCCCCGGGGGGGGCGCGGGAGGCGTTTCG
ACGGCCATGACGACGGCGGGGGGGCTCGTACTAGCCGGCGGAGTTCCCGG
GGCCAGGCAGGGGCAGCGGAGGAGCGTCAGCTTCGGGGGCAGCTCTGATG
AAAGCTCCTCCCACAACGGGGGGCCCGGGGGCGCGCTCGTTGTTAGGGGG
GCGGGGGGGTGGACCGGCTCGGGGGCGAGCTGGCCGCTTTCCGTCGTGGC
GAACGCAGGGTGAGTTGGCAATGGTGGGTATTAAGAGCGTGGACAGCATG
CGTGTCGTTGACCCGTGGATGCGAGAAGGTTGTGCTTGGTTTGGTGCGGC
CTTGTGCTGCTTTGTCGAGGTGCGGCAGCACCCACGTGCGCCCTCCGGCT
TTTTGGGCCCGTGTTTTGGTTAGTATGACCTTGCGTTGTCGATGAAAACA
ACGAGAGCAACGTCTGCTATCGGAGGTTGTCTGGTAACCTCATCCCATCA
AAAGGCGAAGCCAAAAGAGCTCCCATCTTGTTCAGCGCCTCTTCTTCGCC
ATCCACCCCCAAGGTCACCTACTCATCATTCGCAGTTCACCAAAAGCTTC
AGCCTGTCCGAACACCCACCTCTCGTGACGGTCAAAATCAGCAGATCCTG
GCAAGAACCCCCCCCTCCCCATGACTCCTCCGGTGGCAGGTACGAAGCGT
ACGGCAACTACGTGTCGACATCGGTGTCGACCTCCCTGACGTCGATAAAG
GGCGTCCTAGGCGCCGTCAAGACGAAGGCGAAGTCGGCGGTGGGGCTCGG
GGCCGGACCCGCCCCGATCGCGGTCGAGCAGGACCCCCTCTACGAAGCGG
AGGTGGCGAGGATCGAGGAGCTCGTGGCGCCGGTTACGGGGTGAGTTTAC
GGCGCAGGGAAGAAAGCGCCCCGCGTTGGGGCCGGGCAGCCTCGAAAGCT
GTTTTTGGAGACGCGCCTCGTCCGTCGTTGTGCGTCTCTGGTTTGCTCCG
CGGGGATGCACGCAGGGTGGTATTAGCCCCCGCTTCTGGTGTGCGGTGTC
TATCCCCTTGCCGGGGGTCGAGCGAGGGTTTCTTGCCCCGGGCGAGCGCT
CAGCTTTTGTCGAAGAGTTTTTTTTTTAGATGGACGCAACAACACCGAAG
GAACACCTCCTGAGTTTCGTCGTGTGAGGCGTACCTCGAGATTTCGGTTG
AGTTGCAAACAATTGAGGCTTCATTGTGTATTGTTGGGACGAAAACATGA
ACAGGAAATGTCTGGGAAGCTCACGCAACAAAAAGCTCGTAAAACAAAAG
GTGCCCCACTGATCCGCGTCTACCATAAAGCCTGTATTTTATTTTAATTT
TATTTTTATTTTTATCGTCGCCGTGGCTGGGGTTGTTTGCTGACGACTTC
TTGCGCGCGGGGGTCGCGTTCTGATGGCTAGGTTTCGTTAGTCGGGGGGC
GACGCAGAGGGGACGGAAGTGGGGGTGGCTGGCTGGATTTTCGCGTCCTC
TGTTTCCTTGCTTCGAATGGCCGTGGGTTGGTCCCCGGAAAGAGATGGAC
GAACGAGAGAGCACGGCGAGTCCGACTTTTGAGAGAAAAAGGAGGGAGCG
GGGTACCGGTTTTGTGCCCCCTCTTTGTTTTCTGTGTTTTGGATCAACCC
TTGCTGGTTGATGGACTTCAAAAATTTACCAGCCATGAGTCATATTCCAG
GCGAAGATCTCGCACAGACACATGTTCGGCTGCTGGATGTAGAGATTCGT
CCGTTCAATGGATTTTTGGCTTGAAGATGAGACGATCTATCCACGACTTA
CCAAGACCTTTTCTCTTGAAATTTCCCTCGCGAAACAGGGCTGTGAAGAT
TATGGAATCCGCTGCCGTTCTCAAGCGCGGCGTGGGCTACGAGATGTCTC
GTCTCGGCCACTACCTCACCCAGGTGAGC
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10041:71..5149-

>mRNA_H-canaliculatus_F_contig10041.75.1 ID=mRNA_H-canaliculatus_F_contig10041.75.1|Name=mRNA_H-canaliculatus_F_contig10041.75.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=3756bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10041:71..5149- (Hapterophycus canaliculatus Oshoro5f female)
ACACGCTCCGGCACACCGCAACGAACGCAGGGGCGAAGCTTATACTTCAC
CCCTCGGGAAACGCTCATCTTCGGCTACCTGTTTGATCTGGCCGACACGG
ACGACGACGGTCTGGTCGGCGCAAACGATGGAGGCCACGCGCTCCTCGGA
CGGGCGCGCCTGCCGCCGTCCACCCTGCAGCGCCTGTGGTCTGAGGCCGG
GGGGGAAAGACACGCTCCGGCACACCGCAACGAACGCAGGGGCGAAGCTT
ATACTTCACCCCTCGGGAAACGCTCATCTTCGGCTACCTGTTTGATCTGG
CCGACACGGACGACGACGGTCTGGTCGGCGCAAACGATGGAGGCCACGCG
CTCCTCGGACGGGCGCGCCTGCCGCCGTCCACCCTGCAGCGCCTGTGGTC
TGAGGCCGGGGGGGAAAGTCCCGAGGAGTGCTTGGCGCGCCCCCAGTGGT
TCGTCCTCCTAGCGCTCGTGGCGCTGGCCCAGGCCGGGCTTCCGTGCACC
CTGCGCGACCTGCTCCACACCTGCGACGTTTTGTCCGCGCCCAAGTCTCC
GCACACCCAAGCGTTTCAGCAGCACCCAGGTGGCAGCGGCGGCGGCGGCG
GCGGCAACAGCGGCAGTGCGGGACGGCTGCGCCCTATCCCCGATTTCTTC
CTGGACGGAGGCATCCCTCCCCCTCCCCCTCTCGCCCATCCCTCGTCGTC
GCCCGCATCGCCTACTCACGGAGCAGCCGGGGGTCCCGCAGGATTGGCGC
AGGCCCTCCCAGCATCGGCTGGGGGAAGACAGCACCAGCGTCCAGGAGGC
AAAGCCGGACGCGGAAGAAGCACCGTGGGCCTCCCCGGATCGGGAGGGCA
ACAACACCAAGGAAAAGTAGTCGGGGCATGGGATTACTACGGGGGAGGCG
GTGCGGGCGGGAGTGGATGGGACCAGGGGAGCAGCGAGCATGCTCCGGCC
GGGCCCGGGCGGGGCGCCGGCGAGGAGGACGGTTACCAACTGGAGGTGAC
GGTGTACAGCCACCGGGTGGTGGGGGAAGGCTACGGCAGCCACACGGAGT
ACACGGTGCTGGCGAACGCCTCCCTCCCGGGGTTCGCGAGAAGGGAGATG
GAGGTGGCTCGAAGTCCCGAGGAGTGCTTGGCGCGCCCCCAGTGGTTCGT
CCTCCTAGCGCTCGTGGCGCTGGCCCAGGCCGGGCTTCCGTGCACCCTGC
GCGACCTGCTCCACACCTGCGACGTTTTGTCCGCGCCCAAGTCTCCGCAC
ACCCAAGCGTTTCAGCAGCACCCAGGTGGCAGCGGCGGCGGCGGCGGCGG
CAACAGCGGCAGTGCGGGACGGCTGCGCCCTATCCCCGATTTCTTCCTGG
ACGGAGGCATCCCTCCCCCTCCCCCTCTCGCCCATCCCTCGTCGTCGCCC
GCATCGCCTACTCACGGAGCAGCCGGGGGTCCCGCAGGATTGGCGCAGGC
CCTCCCAGCATCGGCTGGGGGAAGACAGCACCAGCGTCCAGGAGGCAAAG
CCGGACGCGGAAGAAGCACCGTGGGCCTCCCCGGATCGGGAGGGCAACAA
CACCAAGGAAAAGTAGTCGGGGCATGGGATTACTACGGGGGAGGCGGTGC
GGGCGGGAGTGGATGGGACCAGGGGAGCAGCGAGCATGCTCCGGCCGGGC
CCGGGCGGGGCGCCGGCGAGGAGGACGGTTACCAACTGGAGGTGACGGTG
TACAGCCACCGGGTGGTGGGGGAAGGCTACGGCAGCCACACGGAGTACAC
GGTGCTGGCGAACGCCTCCCTCCCGGGGTTCGCGAGAAGGGAGATGGAGG
TGGCTCGAAGGTTCAGCGACTTCCGCTGGCTCCACAGCTGCTTTCAGGCA
ATCCCGGGAGTGCTACCCCCGCCGCTCCCTCCATCAAAGTGGGCGGGCAG
CAGCAGCCGAGACTTCGTGGCAGAGCGCATGAAGGGCCTGCAGCGGTACA
TGACACGGGTGGCGGAGCACCCGATTCTGAGCCGAAACTACGCCTTCCAG
GTTCAGCGACTTCCGCTGGCTCCACAGCTGCTTTCAGGCAATCCCGGGAG
TGCTACCCCCGCCGCTCCCTCCATCAAAGTGGGCGGGCAGCAGCAGCCGA
GACTTCGTGGCAGAGCGCATGAAGGGCCTGCAGCGGTACATGACACGGGT
GGCGGAGCACCCGATTCTGAGCCGAAACTACGCCTTCCAGGTGTTTCTAG
AGGGTACGCCGCGAGGCCTGAGAGCTGCCAAGGCCCTCCTGCCGGCCAGG
ATCCCCGGCAGCGGTGGTGCCCACGGGAGCGCCGCCTGGGGTGACACCTT
CAGCCCCTCCATGGCGGGCGGGGGCGGGACGCCGGTAAGCCCCGCCCTGT
CGTCCTCCCCGGGCACGACGCCCCCGGACGAGTCGGCCGGGGTAGGGTTC
GTTCGTAGGCGTTTTTCCCTGGGAGGGGCAGACGACATGTGCGTCCCCGG
GGGGGGCGCGGGAGGCGTTTCGACGGCCATGACGACGGCGGGGGGGCTCG
TACTAGCCGGCGGAGTTCCCGGGGCCAGGCAGGGGCAGCGGAGGAGCGTC
AGCTTCGGGGGCAGCTCTGATGAAAGCTCCTCCCACAACGGGGGGCCCGG
GGGCGCGCTCGTTGTTAGGGGGGCGGGGGGGTGGACCGGCTCGGGGGCGA
GCTGGCCGCTTTCCGTCGTGGCGAACGCAGGGTGTTTCTAGAGGGTACGC
CGCGAGGCCTGAGAGCTGCCAAGGCCCTCCTGCCGGCCAGGATCCCCGGC
AGCGGTGGTGCCCACGGGAGCGCCGCCTGGGGTGACACCTTCAGCCCCTC
CATGGCGGGCGGGGGCGGGACGCCGGTAAGCCCCGCCCTGTCGTCCTCCC
CGGGCACGACGCCCCCGGACGAGTCGGCCGGGGTAGGGTTCGTTCGTAGG
CGTTTTTCCCTGGGAGGGGCAGACGACATGTGCGTCCCCGGGGGGGGCGC
GGGAGGCGTTTCGACGGCCATGACGACGGCGGGGGGGCTCGTACTAGCCG
GCGGAGTTCCCGGGGCCAGGCAGGGGCAGCGGAGGAGCGTCAGCTTCGGG
GGCAGCTCTGATGAAAGCTCCTCCCACAACGGGGGGCCCGGGGGCGCGCT
CGTTGTTAGGGGGGCGGGGGGGTGGACCGGCTCGGGGGCGAGCTGGCCGC
TTTCCGTCGTGGCGAACGCAGGGTACGAAGCGTACGGCAACTACGTGTCG
ACATCGGTGTCGACCTCCCTGACGTCGATAAAGGGCGTCCTAGGCGCCGT
CAAGACGAAGGCGAAGTCGGCGGTGGGGCTCGGGGCCGGACCCGCCCCGA
TCGCGGTCGAGCAGGACCCCCTCTACGAAGCGGAGGTGGCGAGGATCGAG
GAGCTCGTGGCGCCGGTTACGGGGTACGAAGCGTACGGCAACTACGTGTC
GACATCGGTGTCGACCTCCCTGACGTCGATAAAGGGCGTCCTAGGCGCCG
TCAAGACGAAGGCGAAGTCGGCGGTGGGGCTCGGGGCCGGACCCGCCCCG
ATCGCGGTCGAGCAGGACCCCCTCTACGAAGCGGAGGTGGCGAGGATCGA
GGAGCTCGTGGCGCCGGTTACGGGGGCTGTGAAGATTATGGAATCCGCTG
CCGTTCTCAAGCGCGGCGTGGGCTACGAGATGTCTCGTCTCGGCCACTAC
CTCACCCAGGTGAGCGGCTGTGAAGATTATGGAATCCGCTGCCGTTCTCA
AGCGCGGCGTGGGCTACGAGATGTCTCGTCTCGGCCACTACCTCACCCAG
GTGAGC
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