prot_H-canaliculatus_F_contig10799.745.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig10799.745.1
Unique Nameprot_H-canaliculatus_F_contig10799.745.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length131
Homology
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BLAST of mRNA_H-canaliculatus_F_contig10799.745.1 vs. uniprot
Match: A0A6H5KSU2_9PHAE (F-box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSU2_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 4.020e-26
Identity = 56/92 (60.87%), Postives = 64/92 (69.57%), Query Frame = 0 
Query:    1 MTEGVPYRLPLAYVPDGALAIVLSFGTVKELLATSVVCRSWVLDGNRVELWASLGKSFEVTMPVSLGPQ-------HGGRIAFGGKGRRMLR 85
            M E     LPLA++PDGALAIV SF  V +LL+ + VCR WVLDG RV LWASLGK FEVTMPVSLGPQ         G  A GG+G+R+LR
Sbjct:    1 MAERGTCHLPLAFIPDGALAIVFSFLAVNDLLSANKVCRDWVLDGTRVNLWASLGKIFEVTMPVSLGPQTSQRAAGSNGATAGGGRGKRVLR 92
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BLAST of mRNA_H-canaliculatus_F_contig10799.745.1 vs. uniprot
Match: D7FJ95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ95_ECTSI)

HSP 1 Score: 106 bits (264), Expect = 1.380e-24
Identity = 55/92 (59.78%), Postives = 64/92 (69.57%), Query Frame = 0 
Query:    1 MTEGVPYRLPLAYVPDGALAIVLSFGTVKELLATSVVCRSWVLDGNRVELWASLGKSFEVTMPVSLGPQHG-------GRIAFGGKGRRMLR 85
            M E     LPLA++PDGALAIV SF  V +LL+ + VCR WVLDG RV+LWASLGK FEV MPVSLGPQ         G  A GG+G+R+LR
Sbjct:   35 MAEKGTCHLPLAFIPDGALAIVFSFVAVNDLLSANKVCRDWVLDGTRVDLWASLGKIFEVAMPVSLGPQTSQRAAGSTGATAGGGRGKRVLR 126
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10799.745.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KSU2_9PHAE4.020e-2660.87F-box domain-containing protein n=1 Tax=Ectocarpus... [more]
D7FJ95_ECTSI1.380e-2459.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 7..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10799contigH-canaliculatus_F_contig10799:262..1133 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10799.745.1mRNA_H-canaliculatus_F_contig10799.745.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig10799 2..1219 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig10799.745.1 ID=prot_H-canaliculatus_F_contig10799.745.1|Name=mRNA_H-canaliculatus_F_contig10799.745.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=131bp
MTEGVPYRLPLAYVPDGALAIVLSFGTVKELLATSVVCRSWVLDGNRVEL
WASLGKSFEVTMPVSLGPQHGGRIAFGGKGRRMLRFVPRLELLMYEVGVS
NLLEAKSTPRYRIINSEFRMDIFALDFWVI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036047F-box-like_dom_sf