prot_H-canaliculatus_F_contig1079.739.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1079.739.1
Unique Nameprot_H-canaliculatus_F_contig1079.739.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length142
Homology
BLAST of mRNA_H-canaliculatus_F_contig1079.739.1 vs. uniprot
Match: A0A6H5JVC8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVC8_9PHAE)

HSP 1 Score: 147 bits (372), Expect = 7.830e-42
Identity = 74/141 (52.48%), Postives = 97/141 (68.79%), Query Frame = 0
Query:    1 MEKELQSLKEHKLADLVTIDTLPPEGKLIGSRWVFKVKPDGTFKARLVVEGFGHRYGIDCGGTFAPAYRISSQRTLLCIAASEGLHEHHIILKYPFLNAPVEEDMWVFRVPGFEEDHPVTGKHQVLKLLKSPYGLRQSPRN 141
            M+KE++SLK+H +ADLV I +LPP  K IGSRW++K+K  G  KARL V+G+G RYGID GGT+AP  R SSQ  L+ IAA  G     + +   FL + VEE+++V +  G+E    VTG   V+KL KS YGL+QSPRN
Sbjct:   13 MDKEMRSLKDHDVADLVPIQSLPPGAKPIGSRWLYKMKATGVMKARLTVQGWGQRYGIDYGGTYAPVSRFSSQLVLMAIAAERGYVVETMDVVTAFLQSNVEEEVYVRQAKGYEITDEVTGLPLVMKLKKSLYGLKQSPRN 153          
BLAST of mRNA_H-canaliculatus_F_contig1079.739.1 vs. uniprot
Match: A0A6H5KY84_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY84_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 1.210e-39
Identity = 74/141 (52.48%), Postives = 99/141 (70.21%), Query Frame = 0
Query:    1 MEKELQSLKEHKLADLVTIDTLPPEGKLIGSRWVFKVKPDGTFKARLVVEGFGHRYGIDCGGTFAPAYRISSQRTLLCIAASEGLHEHHIILKYPFLNAPVEEDMWVFRVPGFEEDHPVTGKHQVLKLLKSPYGLRQSPRN 141
            M+KE++SLK+H +ADLV I +LPP  K IGSRW++K+K  G  KARL+V+G+G R+GIDCGGT+AP  R SSQ  L+ IAA  G     + +   FL + VEE+++V +  G+E    VTG   V+KL KS YGL+QSPRN
Sbjct:  909 MDKEMKSLKDHDVADLVPIQSLPPGAKPIGSRWLYKMKATGVMKARLIVQGWGQRHGIDCGGTYAPVSRFSSQLVLMAIAAERGYVVETMDVVTAFLQSNVEEEVYVRQAKGYEITDEVTGLPLVMKLKKSLYGLKQSPRN 1049          
BLAST of mRNA_H-canaliculatus_F_contig1079.739.1 vs. uniprot
Match: A0A6H5KCZ9_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCZ9_9PHAE)

HSP 1 Score: 148 bits (373), Expect = 5.600e-39
Identity = 71/141 (50.35%), Postives = 96/141 (68.09%), Query Frame = 0
Query:    1 MEKELQSLKEHKLADLVTIDTLPPEGKLIGSRWVFKVKPDGTFKARLVVEGFGHRYGIDCGGTFAPAYRISSQRTLLCIAASEGLHEHHIILKYPFLNAPVEEDMWVFRVPGFEEDHPVTGKHQVLKLLKSPYGLRQSPRN 141
            M+KE++SLK+H +ADLV +  LPP  K IGSRW++K+K  G  KARL+V+G+G R+GIDCGGT+ P  R SSQ   + IAA  G     + +   FL + VEE+++V +  G+E    VTG   V+KL KS YGL+QSPRN
Sbjct:  345 MDKEIRSLKDHDVADLVPVQRLPPGAKPIGSRWLYKMKATGVMKARLIVQGWGQRHGIDCGGTYGPVSRFSSQLVFMAIAAERGYDVETMDVVTAFLQSKVEEEVYVRQAKGYEITDEVTGLPLVMKLKKSLYGLKQSPRN 485          
BLAST of mRNA_H-canaliculatus_F_contig1079.739.1 vs. uniprot
Match: A0A6H5L2V7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2V7_9PHAE)

HSP 1 Score: 135 bits (340), Expect = 8.200e-38
Identity = 66/141 (46.81%), Postives = 93/141 (65.96%), Query Frame = 0
Query:    1 MEKELQSLKEHKLADLVTIDTLPPEGKLIGSRWVFKVKPDGTFKARLVVEGFGHRYGIDCGGTFAPAYRISSQRTLLCIAASEGLHEHHIILKYPFLNAPVEEDMWVFRVPGFEEDHPVTGKHQVLKLLKSPYGLRQSPRN 141
            M+KE++  K+H +ADLV I +LPP    IGSRW++K+K  G  +ARL+ +G+G R+GIDCGGT+AP  R SSQ  L+ IAA  G     + +   FL + VE +++V +   +E    VTG   V++L KS YGL+QSPRN
Sbjct:   13 MDKEMRGPKDHDVADLVPIQSLPPGANPIGSRWLYKMKATGVMQARLIAQGWGQRHGIDCGGTYAPVRRFSSQLVLMAIAAERGYVVETMKVVTAFLQSNVEGEVYVRQAKRYEITDEVTGLPLVMELKKSSYGLKQSPRN 153          
BLAST of mRNA_H-canaliculatus_F_contig1079.739.1 vs. uniprot
Match: A0A6H5KAG6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAG6_9PHAE)

HSP 1 Score: 140 bits (354), Expect = 5.150e-36
Identity = 69/139 (49.64%), Postives = 96/139 (69.06%), Query Frame = 0
Query:    1 MEKELQSLKEHKLADLVTIDTLPPEGKLIGSRWVFKVKPDGTFKARLVVEGFGHRYGIDCGGTFAPAYRISSQRTLLCIAASEGLHEHHIILKYPFLNAPVEEDMWVFRVPGFEEDHPVTGKHQVLKLLKSPYGLRQSP 139
            M KEL SL +H +ADL+ + ++P    +IG+RWV++VK DG FKAR+VV+G+  ++GIDC  TFAP  +I SQR LL IAA++G     + ++  FLN  + ED++ ++ PGFE+    TGK  V KL KS YGLRQSP
Sbjct:  663 MLKELASLDDHDVADLIPVSSVPAGCSVIGTRWVYRVKTDGRFKARVVVQGWAQQHGIDCFTTFAPVCKIGSQRLLLAIAAAQGWPVIAMDVQTAFLNGKLSEDVYTYQAPGFEKIESSTGKPLVWKLKKSLYGLRQSP 801          
BLAST of mRNA_H-canaliculatus_F_contig1079.739.1 vs. uniprot
Match: A0A6H5JLX1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLX1_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 8.660e-35
Identity = 61/121 (50.41%), Postives = 84/121 (69.42%), Query Frame = 0
Query:    1 MEKELQSLKEHKLADLVTIDTLPPEGKLIGSRWVFKVKPDGTFKARLVVEGFGHRYGIDCGGTFAPAYRISSQRTLLCIAASEGLHEHHIILKYPFLNAPVEEDMWVFRVPGFEEDHPVTG 121
            M+KE++SLK+H +ADLV I +LPP  K IGSRW++K+K  G  KARL+V+G+G R+GIDCGGT+AP  R SSQ  L+ IAA  G     + +   FL + VEE+++V +  G+E    VTG
Sbjct:   10 MDKEMRSLKDHDVADLVPIQSLPPGAKPIGSRWLYKMKATGVMKARLIVQGWGQRHGIDCGGTYAPVSRFSSQLVLMAIAAERGYVVETMDVVTAFLQSNVEEEVYVRQAKGYEITDEVTG 130          
BLAST of mRNA_H-canaliculatus_F_contig1079.739.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 1.180e-27
Identity = 62/140 (44.29%), Postives = 84/140 (60.00%), Query Frame = 0
Query:    2 EKELQSLKEHKLADLVTIDTLPPEGKLIGSRWVFKVKPDGTFKARLVVEGFGHRYGIDCGGTFAPAYRISSQRTLLCIAASEGLHEHHIILKYPFLNAPVEEDMWVFRVPGFEEDHPVTGKHQVLKLLKSPYGLRQSPRN 141
            E+E++SL + K+  LV    +PPE K I S+WVFK K DGTFK R+V +G+    G+DCG T+AP  RI S R + CI     L    + +   FL A ++E+++V + PGFE      G   V+KL KS YGL QSP N
Sbjct: 1171 EREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDK-DGGDMVMKLNKSLYGLAQSPGN 1309          
BLAST of mRNA_H-canaliculatus_F_contig1079.739.1 vs. uniprot
Match: A0A6H5J842_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J842_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 1.190e-27
Identity = 62/140 (44.29%), Postives = 84/140 (60.00%), Query Frame = 0
Query:    2 EKELQSLKEHKLADLVTIDTLPPEGKLIGSRWVFKVKPDGTFKARLVVEGFGHRYGIDCGGTFAPAYRISSQRTLLCIAASEGLHEHHIILKYPFLNAPVEEDMWVFRVPGFEEDHPVTGKHQVLKLLKSPYGLRQSPRN 141
            E+E++SL + K+  LV    +PPE K I S+WVFK K DGTFK R+V +G+    G+DCG T+AP  RI S R + CI     L    + +   FL A ++E+++V + PGFE      G   V+KL KS YGL QSP N
Sbjct: 1336 EREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDK-DGGDMVMKLNKSLYGLAQSPGN 1474          
BLAST of mRNA_H-canaliculatus_F_contig1079.739.1 vs. uniprot
Match: A0A6H5JIN1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIN1_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 1.390e-26
Identity = 63/140 (45.00%), Postives = 83/140 (59.29%), Query Frame = 0
Query:    2 EKELQSLKEHKLADLVTIDTLPPEGKLIGSRWVFKVKPDGTFKARLVVEGFGHRYGIDCGGTFAPAYRISSQRTLLCIAASEGLHEHHIILKYPFLNAPVEEDMWVFRVPGFEEDHPVTGKHQVLKLLKSPYGLRQSPRN 141
            E+E+ SLKE ++  LV    +PP  K I SRWVFK K DG+FK RLV +G+    G+DCG T+AP  R+ S R L CIA    L    + +   FL A + E+++V + PGFE      G   V++L KS YGL QSP N
Sbjct:  856 EREIASLKERQVFKLVPRTAVPPGRKRIKSRWVFKRKVDGSFKGRLVAQGWNQVPGLDCGSTYAPVCRLQSIRMLACIAVQFNLELDQMDVSTAFLYADILENVFVEQPPGFEVKDK-DGGDLVMQLQKSLYGLAQSPSN 994          
BLAST of mRNA_H-canaliculatus_F_contig1079.739.1 vs. uniprot
Match: A0A6H5JYB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYB5_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 1.890e-26
Identity = 60/140 (42.86%), Postives = 82/140 (58.57%), Query Frame = 0
Query:    2 EKELQSLKEHKLADLVTIDTLPPEGKLIGSRWVFKVKPDGTFKARLVVEGFGHRYGIDCGGTFAPAYRISSQRTLLCIAASEGLHEHHIILKYPFLNAPVEEDMWVFRVPGFEEDHPVTGKHQVLKLLKSPYGLRQSPRN 141
            E+E++SL + K+  LV    +PPE K I S+WVFK K DGTFK R+V +G+    G+DCG T+AP  RI S R + CI     L    + +   FL   + E+++V + PGFE      G   V+KL +S YGL QSP N
Sbjct:  952 EREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYTDIHEEVFVEQPPGFEVKDK-DGGDMVMKLNRSLYGLAQSPGN 1090          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1079.739.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JVC8_9PHAE7.830e-4252.48Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KY84_9PHAE1.210e-3952.48Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KCZ9_9PHAE5.600e-3950.35Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5L2V7_9PHAE8.200e-3846.81Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KAG6_9PHAE5.150e-3649.64Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JLX1_9PHAE8.660e-3550.41Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KJH6_9PHAE1.180e-2744.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J842_9PHAE1.190e-2744.29Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5JIN1_9PHAE1.390e-2645.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYB5_9PHAE1.890e-2642.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 21..140
e-value: 2.5E-24
score: 86.3
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 1..140
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 1..140

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1079contigH-canaliculatus_F_contig1079:22235..22920 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1079.739.1mRNA_H-canaliculatus_F_contig1079.739.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1079 22220..23262 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1079.739.1 ID=prot_H-canaliculatus_F_contig1079.739.1|Name=mRNA_H-canaliculatus_F_contig1079.739.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=142bp
MEKELQSLKEHKLADLVTIDTLPPEGKLIGSRWVFKVKPDGTFKARLVVE
GFGHRYGIDCGGTFAPAYRISSQRTLLCIAASEGLHEHHIILKYPFLNAP
VEEDMWVFRVPGFEEDHPVTGKHQVLKLLKSPYGLRQSPRN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like
IPR013103RVT_2