mRNA_H-canaliculatus_F_contig10034.70.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig10034.70.1
Unique NamemRNA_H-canaliculatus_F_contig10034.70.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig10034.70.1 vs. uniprot
Match: D7FXK3_ECTSI (ATP-dependent DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXK3_ECTSI)

HSP 1 Score: 495 bits (1274), Expect = 1.210e-167
Identity = 263/335 (78.51%), Postives = 284/335 (84.78%), Query Frame = 1
Query:    1 LRSLREKGVDAASLTSSSASQAHAAAVMDDI------------TLGGXXXXXXXXGGRGKGA---PRTKLLYVTPEKLAKGGELTAALEGLASRGLISLLAVDEAHCVSTWGHDFRPAYLKLGAFRKKHLQGVPCIALTATATKEVCTDIMKQLAFRQGSRVLKTSFDRPEIHLSVRYKDAMDSGGALQSLVGLLRERRGQSGIVYCHKRATAEDLAKALTRELRDEALLDGGKAFLALPYHGKMSGADRTEAQAKFMSGEADVIAGSVAFGMGVDKANVRFVVHWDLPKSMEGLYQELGRAGRDGSQAVSIVYHSQESVGLLAFLARKPRPLTG 960
            LR L EKGV+AASLTSSSAS++ AAAVMDDI            T  G          R  GA   P+ KLLYVTPEKLAKGGELT AL GLA RGLISLLAVDEAHCVSTWGHDFRPAYL+LGAFRKKHL+GVPC+ALTATAT+EVC DI KQL FR+GSRVLKTSF+R EIHLSV YKDAMD GGAL+ LVG LRERRGQSGIVYCHKR TAE+LAKAL R LR+E+LLDGGKAFLA+PYHGKMS  DRTEAQAKFMSGE DVIAGSVAFGMGVDK++VRFVVHWDLPKSMEGLYQELGRAGRDGS+AVS+VYHS+E+VGLLAFLARKPRPL G
Sbjct:   88 LRGLYEKGVEAASLTSSSASRSRAAAVMDDILAYGGGSGSGHSTKEGVTSEKGGPNSRADGARAAPKIKLLYVTPEKLAKGGELTTALAGLAKRGLISLLAVDEAHCVSTWGHDFRPAYLELGAFRKKHLKGVPCLALTATATEEVCADIKKQLGFREGSRVLKTSFNRAEIHLSVHYKDAMD-GGALEHLVGFLRERRGQSGIVYCHKRDTAEELAKALNRALREESLLDGGKAFLAMPYHGKMSDHDRTEAQAKFMSGEVDVIAGSVAFGMGVDKSDVRFVVHWDLPKSMEGLYQELGRAGRDGSKAVSVVYHSRETVGLLAFLARKPRPLAG 421          
BLAST of mRNA_H-canaliculatus_F_contig10034.70.1 vs. uniprot
Match: A0A6H5KCP0_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCP0_9PHAE)

HSP 1 Score: 407 bits (1045), Expect = 2.200e-132
Identity = 206/245 (84.08%), Postives = 223/245 (91.02%), Query Frame = 1
Query:  232 SRGLISLLAVDEAHCVSTWGHDFRPAYLKLGAFRKKHLQGVPCIALTATATKEVCTDIMKQLAFRQGSRVLKTSFDRPEIHLSVRYKDAMDSGGALQSLVGLLRERRGQSGIVYCHKRATAEDLAKALTRELRDEALLDGGKAFLALPYHGKMSGADRTEAQA--KFMSGEADVIAGSVAFGMGVDKANVRFVVHWDLPKSMEGLYQELGRAGRDGSQAVSIVYHSQESVGLLAFLARKPRPLTG 960
            +RGLISLLAVDEAHCVSTWGHDFRPAYL+LGAFRKKHL+GVPC+ALTATAT+EVC DI KQL FR+GSRVLKTSF+R EIHLSV YKDAMD GGAL+ LVG LRER GQSGIVYCHKR TAE+LAKAL R LR E+LLDG KAFLA+PYHGKMS  DRTEAQA  KFMSGE DVI GSVAFGMGVDK++VRFVVHWDLPKSMEGLYQELGRAGRDGS+AVS+VYHS+E+V LLAFLARKPRPL G
Sbjct:   18 TRGLISLLAVDEAHCVSTWGHDFRPAYLELGAFRKKHLKGVPCLALTATATEEVCADIKKQLGFREGSRVLKTSFNRAEIHLSVHYKDAMD-GGALEHLVGFLRERSGQSGIVYCHKRDTAEELAKALNRALRKESLLDGRKAFLAMPYHGKMSDHDRTEAQARAKFMSGEVDVITGSVAFGMGVDKSDVRFVVHWDLPKSMEGLYQELGRAGRDGSKAVSVVYHSRETVELLAFLARKPRPLAG 261          
BLAST of mRNA_H-canaliculatus_F_contig10034.70.1 vs. uniprot
Match: A0A176VZW5_MARPO (ATP-dependent DNA helicase n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VZW5_MARPO)

HSP 1 Score: 230 bits (586), Expect = 7.230e-66
Identity = 124/269 (46.10%), Postives = 173/269 (64.31%), Query Frame = 1
Query:  145 GAPRTKLLYVTPEKLAKGGELTAALEGLASRGLISLLAVDEAHCVSTWGHDFRPAYLKLGAFRKKHLQGVPCIALTATATKEVCTDIMKQLAFRQGSRVLKTSFDRPEIHLSVRYKDAMDSGGALQSLVGLLRERRGQSGIVYCHKRATAEDLAKALTRELRDEALLDGGKAFLALPYHGKMSGADRTEAQAKFMSGEADVIAGSVAFGMGVDKANVRFVVHWDLPKSMEGLYQELGRAGRDGSQAVSIVYHSQESVGLLAFLARKPRP 951
            G P  +LLYVTPE +A  G +T  ++ L  RGL+SL+AVDEAHC+S+WGHDFRP+Y KL A R  HL  VP +ALTATA K+V  D++K LA     ++  +SF+RP I+  VRYKD + +  A + L  L++       IVYCH RAT +D+   L+++     +           YH  ++   R+EA  ++ SG+  V+  +VAFGMG+D+ +VR V H+++PKS+EG YQE GRAGRDG  A S++Y+  E  GL+ FLARKP P
Sbjct:  166 GRPSLRLLYVTPELIATPGFITR-IKKLHGRGLLSLIAVDEAHCISSWGHDFRPSYRKLSALRT-HLPDVPILALTATAAKKVQDDVVKSLALH-NPQIFISSFNRPNIYYEVRYKDLLKN--AYEDLRNLIKSNPDDCCIVYCHSRATCDDVGLRLSQDKISSRV-----------YHAGLAAKARSEALEEWTSGKVPVVIATVAFGMGIDRKDVRMVCHYNVPKSLEGFYQESGRAGRDGKPARSVIYYGLEDKGLMEFLARKPDP 418          
BLAST of mRNA_H-canaliculatus_F_contig10034.70.1 vs. uniprot
Match: A0A1Y1I869_KLENI (ATP-dependent DNA helicase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I869_KLENI)

HSP 1 Score: 220 bits (561), Expect = 2.110e-62
Identity = 121/266 (45.49%), Postives = 165/266 (62.03%), Query Frame = 1
Query:  145 GAPRTKLLYVTPEKLAKGGELTAALEGLASRGLISLLAVDEAHCVSTWGHDFRPAYLKLGAFRKKHLQGVPCIALTATATKEVCTDIMKQLAFRQGSRVLKTSFDRPEIHLSVRYKDAMDSGGALQSLVGLLRERRGQSGIVYCHKRATAEDLAKALTRELRDEALLDGGKAFLALPYHGKMSGADRTEAQAKFMSGEADVIAGSVAFGMGVDKANVRFVVHWDLPKSMEGLYQELGRAGRDGSQAVSIVYHSQESVGLLAFLARK 942
            G P TKLLYVTPE +A  G + A L  L  RGL+SL+A+DE+HC+S WGHDFRP+Y +L A  K+ L GVP +ALTATA K V  DI++ L   +   + + SF+RP I   VR+KD +      + LV LL    GQ  IVYC  R++ + LA  L         L  G      PYH  +  A+R+     +++G   V+A ++AFGMG+D+A+VR VVH+++PKS+EG YQE GRAGRDG  A S++Y+  E   L+ F+ RK
Sbjct:  140 GRPETKLLYVTPELIATKGFM-AKLRKLHGRGLLSLIAIDESHCISAWGHDFRPSYGRLAAL-KEQLPGVPVMALTATANKTVQEDILRSLNLERPL-IFQASFNRPNIRYEVRFKDVLPGQDPYRDLVRLLNAEPGQCAIVYCLSRSSCDGLAARL---------LSNG--IPCKPYHAGLPDAERSRTLKDWVTGRIPVVAATIAFGMGIDRADVRLVVHFNMPKSIEGFYQESGRAGRDGQPAKSVLYYGSEDESLMQFILRK 391          
BLAST of mRNA_H-canaliculatus_F_contig10034.70.1 vs. uniprot
Match: C3YZS6_BRAFL (DNA helicase n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3YZS6_BRAFL)

HSP 1 Score: 213 bits (541), Expect = 2.740e-62
Identity = 124/274 (45.26%), Postives = 163/274 (59.49%), Query Frame = 1
Query:  151 PRTKLLYVTPEKLAKGGELTAALEGLASRGLISLLAVDEAHCVSTWGHDFRPAYLKLGAFRKKHLQGVPCIALTATATKEVCTDIMKQLAFRQGSRVLKTSFDRPEIHLSVRYKDAMDS------GGALQSL----VGLLRERRGQSGIVYCHKRATAEDLAKALTRELRDEALLDGGKAFLALPYHGKMSGADRTEAQAKFMSGEADVIAGSVAFGMGVDKANVRFVVHWDLPKSMEGLYQELGRAGRDGSQAVSIVYHSQESVGLLAFLARK 942
            P+TKLLY+TPE  A  G     LE L SR L++ LAVDEAHCVS WGHDFRP YLKLG+ R+K L+ VPCIALTATAT  V  DI+  L  ++  +  KTS  RP +   V+YK+ +D         A+++L    V  ++      GIVYC  R    ++A  LT+           K  L+  YH  +  + R E Q  +M G+  VI  +++FGMGVDKA VRFV HW++PKSM G YQE GRAGRDG QA   +Y+S+     + FL ++
Sbjct:  117 PKTKLLYITPELAATPG-FQQLLETLKSRKLLAHLAVDEAHCVSQWGHDFRPDYLKLGSLREK-LEDVPCIALTATATSAVQKDIINSLHLQEPVQKFKTSVFRPNLFYDVKYKEVLDDPYEDLKDFAVKALGEEGVEPVKGPHKGCGIVYCRTRDGCTEVAARLTK-----------KGLLSKAYHAGLKDSTREEVQMDWMEGKVPVIVATISFGMGVDKATVRFVAHWNIPKSMAGYYQESGRAGRDGKQAFCRLYYSRHERDQVCFLIKQ 377          
BLAST of mRNA_H-canaliculatus_F_contig10034.70.1 vs. uniprot
Match: A0A8B6H9D8_MYTGA (DNA helicase n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6H9D8_MYTGA)

HSP 1 Score: 222 bits (566), Expect = 6.380e-62
Identity = 129/280 (46.07%), Postives = 163/280 (58.21%), Query Frame = 1
Query:  151 PRTKLLYVTPEKLAKGGELTAALEGLASRGLISLLAVDEAHCVSTWGHDFRPAYLKLGAFRKKHLQGVPCIALTATATKEVCTDIMKQLAFRQGSRVLKTSFDRPEIHLSVRYKDAMDSGGALQSLVGLLRERRGQS----------------GIVYCHKRATAEDLAKALTRELRDEALLDGGKAFLALPYHGKMSGADRTEAQAKFMSGEADVIAGSVAFGMGVDKANVRFVVHWDLPKSMEGLYQELGRAGRDGSQAVSIVYHSQESVGLLAFLARK 942
            P TKLLYVTPE++A  G  + A + L  R L   L VDEAHCVS WGHDFRP YLKLG FRK+ + GVPCIALTATAT++V  DI+KQL  ++     KTS  RP ++  VR K+ +  G   + L     E   +S                GIVYC  R    ++A  LTR           K  L+ PYH  +    R E Q  +M G+  VIA +++FGMGVDK NVRFV HW LPKSM G YQE GRAGRDG+Q+   +Y+S++    ++FL  K
Sbjct:  114 PNTKLLYVTPEQVATDGFKSLA-DSLMKRKLFKYLIVDEAHCVSQWGHDFRPDYLKLGCFRKR-IPGVPCIALTATATEQVLKDIIKQLKLKEPIAKFKTSCFRPNLYYDVRMKETL--GDPYKDLSEFCLEALNRSQAQKEELLENWSKYGCGIVYCRTRDACAEVASQLTR-----------KGVLSKPYHAGLKSGIREEVQNDWMEGKFPVIAATISFGMGVDKPNVRFVAHWTLPKSMAGYYQESGRAGRDGNQSYCRLYYSRQERDTISFLINK 378          
BLAST of mRNA_H-canaliculatus_F_contig10034.70.1 vs. uniprot
Match: UPI001FAE2F9E (LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q5-like n=1 Tax=Girardinichthys multiradiatus TaxID=208333 RepID=UPI001FAE2F9E)

HSP 1 Score: 210 bits (534), Expect = 1.550e-61
Identity = 123/274 (44.89%), Postives = 158/274 (57.66%), Query Frame = 1
Query:  139 GKGAPRTKLLYVTPEKLAKGGELTAALEGLASRGLISLLAVDEAHCVSTWGHDFRPAYLKLGAFRKKHLQGVPCIALTATATKEVCTDIMKQLAFRQGSRVLKTSFDRPEIHLSVRYKDAMDSG-----GALQSLVGLLRERRGQS-GIVYCHKRATAEDLAKALTRELRDEALLDGGKAFLALPYHGKMSGADRTEAQAKFMSGEADVIAGSVAFGMGVDKANVRFVVHWDLPKSMEGLYQELGRAGRDGSQAVSIVYHSQESVGLLAFLARK 942
            G   P+ KLLY+TPE +A        L GL SRGL+S LAVDEAHCVS WGHDFRP YLKLG  R + + GVPC+ALTATA K V  DI++ L  R     +   F R  +H  V ++D + +        ++  + +     GQ  GIVYC  R   E +A  LT+              LA  YH  + G DRTE Q ++M G+  VI  +++FGMGVDKANVRFV HW+L KS+ G YQE GRAGRDG  ++   Y+S+     L FL R+
Sbjct:  106 GSNQPKLKLLYITPEMVASAS-FQPCLTGLCSRGLLSYLAVDEAHCVSQWGHDFRPDYLKLGELRAR-IPGVPCLALTATAPKNVQEDIVQSLRLRSPMSFVTPVFRR-NLHYDVIFRDLLPNPYVHLCAFIKKALAMSSGSAGQDCGIVYCRTREGCETVAYQLTK-----------LGVLAKSYHAGLKGGDRTEVQNEWMQGKVLVIVATISFGMGVDKANVRFVAHWNLAKSLAGYYQESGRAGRDGLPSLCRTYYSRRDKEXLNFLIRQ 365          
BLAST of mRNA_H-canaliculatus_F_contig10034.70.1 vs. uniprot
Match: A0A8C9TLY1_SCLFO (ATP-dependent DNA helicase n=2 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9TLY1_SCLFO)

HSP 1 Score: 214 bits (546), Expect = 2.130e-61
Identity = 126/266 (47.37%), Postives = 158/266 (59.40%), Query Frame = 1
Query:  148 APRTKLLYVTPEKLAKGGELTAALEGLASRGLISLLAVDEAHCVSTWGHDFRPAYLKLGAFRKKHLQGVPCIALTATATKEVCTDIMKQLAFRQGSRVLKTSFDRPEIHLSVRYKDAM-DSGGALQSLVGLLRERRGQSGIVYCHKRATAEDLAKALTRELRDEALLDGGKAFLALPYHGKMSGADRTEAQAKFMSGEADVIAGSVAFGMGVDKANVRFVVHWDLPKSMEGLYQELGRAGRDGSQAVSIVYHSQESVGLLAFLARK 942
            +PR KLLYVTPE L+        L GL+SRGL+S LAVDEAHCVS WGHDFRP YLKLG  R   L GVPC+ALTATA   V  DI + L  R       T   R  +H  + Y++ + D  G L + +          GI+YC  R + E++A  LT       LL      LA PYH  +  ADRT+AQ  +M G+  VI  +++FGMGVDKANVRFVVHW+L KS+   YQE GRAGRDG  ++  VY+S +    + FL +K
Sbjct:  108 SPRLKLLYVTPEMLSSAS-FQPCLSGLSSRGLVSYLAVDEAHCVSQWGHDFRPDYLKLGELRGL-LSGVPCLALTATAPARVREDICRALRLRSPLS-FSTPVFRSNLHYDIIYRELVPDQYGHLHTFIVKALGGSSGCGIIYCRTRHSCEEVAHQLT-------LL----GVLAKPYHAGLKAADRTDAQNDWMQGKVPVIVATISFGMGVDKANVRFVVHWNLAKSLASYYQESGRAGRDGLPSLCRVYYSVQDQNQIRFLIQK 359          
BLAST of mRNA_H-canaliculatus_F_contig10034.70.1 vs. uniprot
Match: A0A6J8CDI8_MYTCO (DNA helicase n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8CDI8_MYTCO)

HSP 1 Score: 219 bits (559), Expect = 4.390e-61
Identity = 128/280 (45.71%), Postives = 163/280 (58.21%), Query Frame = 1
Query:  151 PRTKLLYVTPEKLAKGGELTAALEGLASRGLISLLAVDEAHCVSTWGHDFRPAYLKLGAFRKKHLQGVPCIALTATATKEVCTDIMKQLAFRQGSRVLKTSFDRPEIHLSVRYKDAMDSGGALQSLVGLLRERRGQS----------------GIVYCHKRATAEDLAKALTRELRDEALLDGGKAFLALPYHGKMSGADRTEAQAKFMSGEADVIAGSVAFGMGVDKANVRFVVHWDLPKSMEGLYQELGRAGRDGSQAVSIVYHSQESVGLLAFLARK 942
            P+TKLLYVTPE++A  G  + A E L  R L   L VDEAHCVS WGHDFRP YLKLG FRK+ + GVPCIALTATAT++V  DI+KQL  ++     KTS  RP ++  V+ K+ +  G   + L     E   +S                GIVYC  R    ++A  LTR           K   + PYH  +    R E Q  +M G+  VIA +++FGMGVDK NVRFV HW LPKSM G YQE GRAGRDG+Q+   +Y+S++    ++FL  K
Sbjct:  114 PKTKLLYVTPEQVATDGFKSLA-ESLMKRKLFKYLIVDEAHCVSQWGHDFRPDYLKLGYFRKR-IPGVPCIALTATATEQVLKDIIKQLKLKEPIAKFKTSCFRPNLYYDVKMKETL--GDPYKDLSEFCLEALNRSQAQKEELLENWSEYGCGIVYCRTRDACAEVASQLTR-----------KGVPSKPYHAGLKSGIREEVQNDWMEGKFPVIAATISFGMGVDKPNVRFVAHWTLPKSMAGYYQESGRAGRDGNQSYCRLYYSRQERDTISFLINK 378          
BLAST of mRNA_H-canaliculatus_F_contig10034.70.1 vs. uniprot
Match: UPI001C3DAD5E (ATP-dependent DNA helicase Q5-like n=2 Tax=Oncorhynchus tshawytscha TaxID=74940 RepID=UPI001C3DAD5E)

HSP 1 Score: 207 bits (528), Expect = 4.780e-61
Identity = 125/273 (45.79%), Postives = 157/273 (57.51%), Query Frame = 1
Query:  148 APRTKLLYVTPEKLAKGGELTAALEGLASRGLISLLAVDEAHCVSTWGHDFRPAYLKLGAFRKKHLQGVPCIALTATATKEVCTDIMKQLAFRQGSRVLKTSFDRPEIHLSVRYKDAMDSGGALQSLVGLLRER-------RGQS-GIVYCHKRATAEDLAKALTRELRDEALLDGGKAFLALPYHGKMSGADRTEAQAKFMSGEADVIAGSVAFGMGVDKANVRFVVHWDLPKSMEGLYQELGRAGRDGSQAVSIVYHSQESVGLLAFLARK 942
            +PR KLLY+TPE +A        L GL SR L+S LAVDEAHCVS WGHDFRP YLKLG+ R + L G+PC+ALTATA ++V  DI K L  R         F R  +H  V Y++ ++     + L   +RE        +GQ  GIVYC  R   E +A  LT+              LA PYH  +   DRTEAQ  +M G+  VI  +++FGMGVDK+NVRFV HW+L KS+   YQE GRAGRDG  +    Y+S +    L FL RK
Sbjct:   69 SPRLKLLYITPEMVASSA-FQPCLTGLLSRSLLSYLAVDEAHCVSQWGHDFRPDYLKLGSLRAR-LPGIPCVALTATAPQKVQEDIAKSLRLRSPLSFATPVF-RSNLHYEVVYRELLED--PYKHLHAFIREALTLGEGPKGQGCGIVYCRTRDGCETVAYQLTK-----------LGVLAKPYHAGLKAGDRTEAQTDWMQGKVLVIVATISFGMGVDKSNVRFVAHWNLAKSLASYYQESGRAGRDGLPSSCRTYYSPKDREQLNFLIRK 325          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10034.70.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXK3_ECTSI1.210e-16778.51ATP-dependent DNA helicase n=1 Tax=Ectocarpus sili... [more]
A0A6H5KCP0_9PHAE2.200e-13284.08ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A176VZW5_MARPO7.230e-6646.10ATP-dependent DNA helicase n=2 Tax=Marchantia poly... [more]
A0A1Y1I869_KLENI2.110e-6245.49ATP-dependent DNA helicase n=1 Tax=Klebsormidium n... [more]
C3YZS6_BRAFL2.740e-6245.26DNA helicase n=1 Tax=Branchiostoma floridae TaxID=... [more]
A0A8B6H9D8_MYTGA6.380e-6246.07DNA helicase n=1 Tax=Mytilus galloprovincialis Tax... [more]
UPI001FAE2F9E1.550e-6144.89LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q5... [more]
A0A8C9TLY1_SCLFO2.130e-6147.37ATP-dependent DNA helicase n=2 Tax=Scleropages for... [more]
A0A6J8CDI8_MYTCO4.390e-6145.71DNA helicase n=1 Tax=Mytilus coruscus TaxID=42192 ... [more]
UPI001C3DAD5E4.780e-6145.79ATP-dependent DNA helicase Q5-like n=2 Tax=Oncorhy... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10034contigH-canaliculatus_F_contig10034:407..5151 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score496.1
Seed ortholog evalue1.2e-137
Seed eggNOG ortholog2880.D7FXK3
KEGG koko:K10901
KEGG Pathwayko03440,ko03460,map03440,map03460
KEGG ModuleM00295,M00414
EggNOG free text desc.four-way junction helicase activity
EggNOG OGsCOG0514@1,KOG0351@2759
Ec32 ortholog descriptionDEAD box helicase
Ec32 orthologEc-28_002030.1
EC3.6.4.12
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03032,ko03400
Hectar predicted targeting categoryother localisation
Exons7
Model size960
Cds size960
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928632.0369594-CDS-H-canaliculatus_F_contig10034:406..5691622928632.0369594-CDS-H-canaliculatus_F_contig10034:406..569Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10034 407..569 -
1696845503.7622607-CDS-H-canaliculatus_F_contig10034:406..5691696845503.7622607-CDS-H-canaliculatus_F_contig10034:406..569Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10034 407..569 -
1622928632.048902-CDS-H-canaliculatus_F_contig10034:1397..14771622928632.048902-CDS-H-canaliculatus_F_contig10034:1397..1477Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10034 1398..1477 -
1696845503.7808664-CDS-H-canaliculatus_F_contig10034:1397..14771696845503.7808664-CDS-H-canaliculatus_F_contig10034:1397..1477Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10034 1398..1477 -
1622928632.0610745-CDS-H-canaliculatus_F_contig10034:2010..21451622928632.0610745-CDS-H-canaliculatus_F_contig10034:2010..2145Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10034 2011..2145 -
1696845503.7932913-CDS-H-canaliculatus_F_contig10034:2010..21451696845503.7932913-CDS-H-canaliculatus_F_contig10034:2010..2145Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10034 2011..2145 -
1622928632.0742826-CDS-H-canaliculatus_F_contig10034:2432..25221622928632.0742826-CDS-H-canaliculatus_F_contig10034:2432..2522Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10034 2433..2522 -
1696845503.8036103-CDS-H-canaliculatus_F_contig10034:2432..25221696845503.8036103-CDS-H-canaliculatus_F_contig10034:2432..2522Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10034 2433..2522 -
1622928632.0871415-CDS-H-canaliculatus_F_contig10034:3336..34381622928632.0871415-CDS-H-canaliculatus_F_contig10034:3336..3438Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10034 3337..3438 -
1696845503.8186183-CDS-H-canaliculatus_F_contig10034:3336..34381696845503.8186183-CDS-H-canaliculatus_F_contig10034:3336..3438Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10034 3337..3438 -
1622928632.100316-CDS-H-canaliculatus_F_contig10034:4147..43011622928632.100316-CDS-H-canaliculatus_F_contig10034:4147..4301Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10034 4148..4301 -
1696845503.8310497-CDS-H-canaliculatus_F_contig10034:4147..43011696845503.8310497-CDS-H-canaliculatus_F_contig10034:4147..4301Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10034 4148..4301 -
1622928632.1104517-CDS-H-canaliculatus_F_contig10034:4915..51511622928632.1104517-CDS-H-canaliculatus_F_contig10034:4915..5151Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10034 4916..5151 -
1696845503.839323-CDS-H-canaliculatus_F_contig10034:4915..51511696845503.839323-CDS-H-canaliculatus_F_contig10034:4915..5151Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10034 4916..5151 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10034.70.1prot_H-canaliculatus_F_contig10034.70.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig10034 407..5151 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig10034.70.1

>prot_H-canaliculatus_F_contig10034.70.1 ID=prot_H-canaliculatus_F_contig10034.70.1|Name=mRNA_H-canaliculatus_F_contig10034.70.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=320bp
LRSLREKGVDAASLTSSSASQAHAAAVMDDITLGGGGGGGGGDGGRGKGA
PRTKLLYVTPEKLAKGGELTAALEGLASRGLISLLAVDEAHCVSTWGHDF
RPAYLKLGAFRKKHLQGVPCIALTATATKEVCTDIMKQLAFRQGSRVLKT
SFDRPEIHLSVRYKDAMDSGGALQSLVGLLRERRGQSGIVYCHKRATAED
LAKALTRELRDEALLDGGKAFLALPYHGKMSGADRTEAQAKFMSGEADVI
AGSVAFGMGVDKANVRFVVHWDLPKSMEGLYQELGRAGRDGSQAVSIVYH
SQESVGLLAFLARKPRPLTG
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mRNA from alignment at H-canaliculatus_F_contig10034:407..5151-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig10034.70.1 ID=mRNA_H-canaliculatus_F_contig10034.70.1|Name=mRNA_H-canaliculatus_F_contig10034.70.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=4745bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10034:407..5151- (Hapterophycus canaliculatus Oshoro5f female)
CTCCGGAGTCTTCGCGAGAAGGGCGTCGACGCGGCGTCGCTCACGTCATC GTCGGCCTCGCAGGCTCATGCGGCCGCCGTGATGGACGACATCACCCTCG GCGGCGGCGGCGGCGGCGGCGGCGGCGATGGCGGGAGGGGGAAGGGGGCG CCGCGGACGAAGCTGCTCTACGTCACGCCCGAGAAGCTCGCCAAGGGCGG CGAGCTGACCGCGGCTCTGGAAGGGTTGGCGTCCAGGTGCGCGGAGGGGG GCGTCGGCGCTGGCGGTTGTGAGGAAGGGGGGACGCGGGTTCGCGGTCGA GAGCGTGTAAGCGCTGCCCTCTGTGCAGCTTGTGTGGGGTGGAGTTTGCG GGAGTGTGGTCTGAACGCATGCTTCCTGGCTCGTTGCTCCCTCGTGTGCG CCATCCCGAGCCCCATCTCGGCACACCAACCCAACGGGTAGCCGTGCTCT GCATCGTCGGCGTTCCCCCAGCGTCTCTCTTGCAATTGTAGCGCGTGCGA GCCCTACGAGCGAGGAGAGGACCAGAAGGGGAAGAAAGGGAACGGGGCGT GAAAGTTCGCTTTCTCTAGGAAGGGGTTGATGCTGGACTGGGGACGAGGC GAGAACGGGAAGGCCGGAGGGCGAACCGTACTATTCATTCATTTTGCGGT CATCGACCAAACCACACCTCTCACGCTCACCGGAGCCGTGGCCAATAGGC ACGATTTTCCCGAAGCACGGGTCCGATCGCAGTGCGTTTGTCGTCGTTGT CGTTGTTCCCCTTCTCCTTCTTGCTCCCGTCGTGCTTTTGTTTTGTTCTG TTCCGTCTTTTGTTTTGTTCTGCTCTGCCTTTCGCTCGCGCGCCCTTCAG GGGGCTGATCAGCCTCCTGGCCGTGGACGAAGCTCACTGCGTCAGCACGT GGGGCCACGACTTCCGGCCGGCCTACCTGAAGCTGGGGGCGTTCCGCAAG AAGCACCTGCAGGGGGTCCCGTGCATCGCCCTGACGGCAACCGCCACCAA GGAGGTGCTTCTCGCGCGCCTTGACCTTCGTGCCCCCCTTTTTTTTTCGT CTTACGTGGAAGCCGCTTCTCTTCGTTTCGTTTTCCCCCCCTTTTTTTTC TCGCCCTAACTTTTCTCGGGACGGTGCAGAACACGAATCGACTCGTTCTT GTTGTTGCCGCCGTCGATGCCATGGTAGACCGTTCAGGCGAGGGTGTCGC TGTCAGAAATCTTTGGTCATGCGACAGCAGCGATAGCGATCGTCTCCCCT CACTTGTGGTCAACGGGAGGGGCTTCGTCTCTTCAGGCGTACGCGGCCTG CGCACATCGCACATCGTGCTGGCTGGATCAACGTCGTTGTAGAGCGCACC GGATGAAACAGTCTTCTCGAGCGAATCCTGGGCTTTAACGCCCCACGTAG ACGGAAACACTTGTGGTGGCTTAGGTTGCCCTAAGCAAGCCGGCACAGGA CTCACGTGTGTTGACGACAACGACCTCTTGGAGGACGAGCCACGATAGCT TCTTCCGTGCTTTCGTGCGTGTGGGTCGTGTGGCCCACGCACTAATGCGC GTCTACCGTGCCCGACTTCTCTTTGTTTCGTTGCTCTTTTTTTTCTTCTT CATTTTTTTTCGTCTCCTGCGCGAACGTGCGTGCGTGCGTGCGTGCTCGC TTGCTCGCTTGCTCGCTTGCTTCCTTCCCTCCTTCCCTGCTTCCTTGCCT TCGACCGGTTCAGGTATGCACGGACATCATGAAGCAGCTCGCGTTCCGCC AAGGATCTCGAGTGCTCAAGACGTCCTTCGACCGCCCGGAAATTCACCTC TCGGTCCGCTACAAGGTGCGGCGCATCCACAGAACTGCGGCCCGTCCCGC TCACCTTTCGCTGTTTTTCTACCCGTTCCGGTGTGGCCTAAGCCGCGGGG AGGTTTCATCCTTGTTTTCGGCGCGTGCAAGGGGCCTGAGCGTTCTCTTT CGCCTAGTCCCGGCACACGTGGAACGCGCTGTCACCCTTTCATGTGAATG GCTGCAACATGTACCCCTACTCCCGTACGCTTTTCCAGCGCATGCCCCAT GCCCGAAGACGAGCAAGCGGAAGGCGGCGGGAGTGGGGGTAGGGGTGGTG GTCGCGATGGCACCTGGACCAGCAGCCACGCGCATTCACCCCCCTCCCCG CCCCCCCAACCACCCGGGAAATCGAACAAGAACGCCTCCACGTAGACGTC GGTGTCTTACCTTGTTGTTGAACCAAACGATGGCGTCGAAATTTCGGCGA GGCTTGGCACTGAAAGGACGGGGACAAGGAAGAGAGCGGAGAGTCAGGTT GACGATCACGCTACGCTCTCCCCTGTGGTCCCGATGCCGCACGCAGGCGC GCGTGTGCCGGTACCGATTCCCCCTTTCGACGGAGAAGGGCCTGAAAAGC CCGGGTTGTCGCCGAAAACGTGAAGCTGTGCTTGTACGGCGTAGCCCTCT TTTTCGCGAGAAAAAGCCAACGCCAACCGACCTGCGCGGTCTTAAGGGCG AAGGACCGTAAATGCGAGGGGCCCCGCACAGACCCGCTGTCGACAACCGA CGAAGATGTTCACTCAGGATGGGCATGCGTAACACGCGTCGATCCTTCCT CGCGGGCGCTTCGCTTTCCTGCTCGAAAGGACGCCATGGACAGCGGTGGA GCGCTCCAGAGCCTCGTGGGCCTCCTGCGGGAGAGGCGCGGGCAATCGGG GATCGTGTACTGCCACAAGGTGCGAGGGGTGGGGTCTGCTCCTCCCTCGA TGCCGCCGCCGCCGCCGCCGCCGCTGCCACCTCGCAAACGCTGGTGCCTG CACTACTGCCTGCGTCACCGCCTACGCCACCGCTGATGCCGCTGATGCAC CGCTGCCCTCGTCGTTGCCACCGCCGTCGTACTTTTCTTGCCATCGTCGC GGTTCACCTTTCCCGCGTCGCTTCCTTCGTTGTTGGCGCCGTTGGCCTCT CGTGGCTTTGTTGGCTGTGTCGGCTGTGCCGGTCGCGTTTCGCCGCCCCG CGAAAGAGGGCGACGGCGGAGGACCTGGCGAAGGCGCTCACCCGAGAGCT CCGAGATGAGGCCCTCCTCGACGGCGGGAAGGCGTTTCTCGCGCTGCCGT ACCACGGGAAGATGTCGGGCGCGGACCGAACGGAAGCGCAGGTAGGTCCG CTTGTACGCACCGCCTTCTCGCCTGTTTGTTGCTTTCGGGGCAGGGAGAT CGCACGGTGGGACATCCTCGAGAGCCGTCCTAGATGCCGCGCGTGCGCGT GAGACACTGCCCGGGGAAAATTTCCGGAAAAGGCCACGCGCGCGCAGACG CCGAGGAGGCATTTGTGGGGCGCAAACCACGCGCGTGGTCTCGCCGTGTG GTGGCTCGGACGCCGCCTGAAAGCGAAGTGCTGATGCCGCGTCGTGGTTG AAGCACAAGCTTCCGAGGCTTCCAGAGGCTGCGTGATGGCGACGATGTTT CTGACTCGAGGGGGAGTCCTCGTGGAGCGGTGCGACCGCCGTGGCTTCCG GGACGAAGGATCAGCAGGGGCTTCGCGTATTTTAACGGCCCCCCTCTCCC CATCCCGTCTTATGGAAGAGCCGCGTGGGCAAGGAAGGACCTGATTGGAC AATTCGCGCCTTGTGGTTGCACCATTGTGCCCGTAACCATGTTGTTCCTC TCGCCGTTGTTGTTCTCGTTCCAGGCGAAGTTCATGTCTGGAGAGGCGGA CGTGATCGCGGGGAGCGTGGCCTTCGGCATGGGCGTGGACAAGGCCAACG TCAGGTGAGGGACGAGGGTTTTTCGGTCGCACACCCTCGTGGACGTGTCA TGCACGAAGGCATGCCTGATTGATACCCCTTGCCTGCGTGTTGCCGCATC TGTTACTGCTGGTGCTGGTGCTCTGGTGATGATACTGGTGCTGGTGCTTT GGGCTGGTGCTTTGGGCGGGTGTTGGTGCTCCCGCGCCTGCTGCTGCCGC GTTTGTTGCTGTTGTTGATGTTGCGCGAGTACATCTTCTTCGCTTCTTGC TCAGGGCCCACCTACTCCTGACCTCGTCCCGGCGTCACGCGCTCGTCCGA GGCGTGCACACGTGCGACCCGCCTCACCTACTCCTGACCTCGTCCTGGCG TCACGCGCTCGTCCGAGACGTGCACACGTGCGACCCTCCTCGAGTGTGCT CTACACCGTGGGGCACCGCCACGGCTCATCAAGACCCTTTTGGAAATCTG AAAGGAACAACGCCAGGAAGAAAGAAGAAATGCAATCGCCTCGAGTTGGA CCGACTGAAACAGGGGTGCTAGGAGGAGGGGCGTTCCCGAACTGCGTCCG CGGATGGCAAGTCCATTTTGGACACAAAAAGAAACCGACGTTCCCGCGTG GGTTGGCTCGGTGACCGAGACAACAAACTCCGATTCTGAGATGGGGCGCC CGGTGTCATTCTTAGCTCTCGTACTGCTGTTGTTCTCTCGAGCGAAAAAC GAAAAACCATCAACCACCACCACCACCGCGAACGACCACAGCCACAGCCG CCACCGCAGCCCCCAGGTACAACCACCAGTAGCATCGGCCTCAGCGACAA CAAGAAATGCAATACCGACAATATTTCGCTAGGTTCGTGGTGCACTGGGA CTTGCCGAAGAGCATGGAAGGCCTGTACCAGGAGCTGGGTCGCGCGGGGC GGGACGGATCACAGGCGGTCAGCATCGTCTACCACAGCCAAGAGTCGGTC GGCCTTCTAGCCTTCTTGGCAAGGAAACCCCGCCCGCTCACAGGC
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10034:407..5151-

>mRNA_H-canaliculatus_F_contig10034.70.1 ID=mRNA_H-canaliculatus_F_contig10034.70.1|Name=mRNA_H-canaliculatus_F_contig10034.70.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1920bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10034:407..5151- (Hapterophycus canaliculatus Oshoro5f female)
CTCCGGAGTCTTCGCGAGAAGGGCGTCGACGCGGCGTCGCTCACGTCATC
GTCGGCCTCGCAGGCTCATGCGGCCGCCGTGATGGACGACATCACCCTCG
GCGGCGGCGGCGGCGGCGGCGGCGGCGATGGCGGGAGGGGGAAGGGGGCG
CCGCGGACGAAGCTGCTCTACGTCACGCCCGAGAAGCTCGCCAAGGGCGG
CGAGCTGACCGCGGCTCTGGAAGGGTTGGCGTCCAGCTCCGGAGTCTTCG
CGAGAAGGGCGTCGACGCGGCGTCGCTCACGTCATCGTCGGCCTCGCAGG
CTCATGCGGCCGCCGTGATGGACGACATCACCCTCGGCGGCGGCGGCGGC
GGCGGCGGCGGCGATGGCGGGAGGGGGAAGGGGGCGCCGCGGACGAAGCT
GCTCTACGTCACGCCCGAGAAGCTCGCCAAGGGCGGCGAGCTGACCGCGG
CTCTGGAAGGGTTGGCGTCCAGGGGGCTGATCAGCCTCCTGGCCGTGGAC
GAAGCTCACTGCGTCAGCACGTGGGGCCACGACTTCCGGCCGGCCTACCT
GAAGCTGGGGGCGTTCCGCAAGAAGCACCTGCAGGGGGTCCCGTGCATCG
CCCTGACGGCAACCGCCACCAAGGAGGGGGCTGATCAGCCTCCTGGCCGT
GGACGAAGCTCACTGCGTCAGCACGTGGGGCCACGACTTCCGGCCGGCCT
ACCTGAAGCTGGGGGCGTTCCGCAAGAAGCACCTGCAGGGGGTCCCGTGC
ATCGCCCTGACGGCAACCGCCACCAAGGAGGTATGCACGGACATCATGAA
GCAGCTCGCGTTCCGCCAAGGATCTCGAGTGCTCAAGACGTCCTTCGACC
GCCCGGAAATTCACCTCTCGGTCCGCTACAAGGTATGCACGGACATCATG
AAGCAGCTCGCGTTCCGCCAAGGATCTCGAGTGCTCAAGACGTCCTTCGA
CCGCCCGGAAATTCACCTCTCGGTCCGCTACAAGGACGCCATGGACAGCG
GTGGAGCGCTCCAGAGCCTCGTGGGCCTCCTGCGGGAGAGGCGCGGGCAA
TCGGGGATCGTGTACTGCCACAAGGACGCCATGGACAGCGGTGGAGCGCT
CCAGAGCCTCGTGGGCCTCCTGCGGGAGAGGCGCGGGCAATCGGGGATCG
TGTACTGCCACAAGAGGGCGACGGCGGAGGACCTGGCGAAGGCGCTCACC
CGAGAGCTCCGAGATGAGGCCCTCCTCGACGGCGGGAAGGCGTTTCTCGC
GCTGCCGTACCACGGGAAGATGTCGGGCGCGGACCGAACGGAAGCGCAGA
GGGCGACGGCGGAGGACCTGGCGAAGGCGCTCACCCGAGAGCTCCGAGAT
GAGGCCCTCCTCGACGGCGGGAAGGCGTTTCTCGCGCTGCCGTACCACGG
GAAGATGTCGGGCGCGGACCGAACGGAAGCGCAGGCGAAGTTCATGTCTG
GAGAGGCGGACGTGATCGCGGGGAGCGTGGCCTTCGGCATGGGCGTGGAC
AAGGCCAACGTCAGGCGAAGTTCATGTCTGGAGAGGCGGACGTGATCGCG
GGGAGCGTGGCCTTCGGCATGGGCGTGGACAAGGCCAACGTCAGGTTCGT
GGTGCACTGGGACTTGCCGAAGAGCATGGAAGGCCTGTACCAGGAGCTGG
GTCGCGCGGGGCGGGACGGATCACAGGCGGTCAGCATCGTCTACCACAGC
CAAGAGTCGGTCGGCCTTCTAGCCTTCTTGGCAAGGAAACCCCGCCCGCT
CACAGGCGTTCGTGGTGCACTGGGACTTGCCGAAGAGCATGGAAGGCCTG
TACCAGGAGCTGGGTCGCGCGGGGCGGGACGGATCACAGGCGGTCAGCAT
CGTCTACCACAGCCAAGAGTCGGTCGGCCTTCTAGCCTTCTTGGCAAGGA
AACCCCGCCCGCTCACAGGC
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