prot_H-canaliculatus_F_contig10724.691.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig10724.691.1
Unique Nameprot_H-canaliculatus_F_contig10724.691.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length96
Homology
BLAST of mRNA_H-canaliculatus_F_contig10724.691.1 vs. uniprot
Match: D7FZW2_ECTSI (Dicer-like 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW2_ECTSI)

HSP 1 Score: 175 bits (444), Expect = 6.170e-49
Identity = 86/96 (89.58%), Postives = 93/96 (96.88%), Query Frame = 0
Query:    1 MQSFHPKLKVDLGRGPGKGLGPRLFVGLASAAPLPLTATQASKLGILDSFDVDLNPAQQMAAMVQWHRETVGMAALYEIPHQMTQTPQNDPAKSPF 96
            M+SFHPKLKVDLGRGPGKGLGPRLFVGLASAAPLPLTA+QA+K+GI+DSFDVDLNPAQ MAA+VQWH+ETVGMAALYEIPHQM QTP NDPAKSPF
Sbjct:  772 MRSFHPKLKVDLGRGPGKGLGPRLFVGLASAAPLPLTASQAAKVGIVDSFDVDLNPAQ-MAAIVQWHKETVGMAALYEIPHQMMQTPLNDPAKSPF 866          
BLAST of mRNA_H-canaliculatus_F_contig10724.691.1 vs. uniprot
Match: A0A6H5KQM7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQM7_9PHAE)

HSP 1 Score: 174 bits (441), Expect = 1.580e-48
Identity = 85/96 (88.54%), Postives = 92/96 (95.83%), Query Frame = 0
Query:    1 MQSFHPKLKVDLGRGPGKGLGPRLFVGLASAAPLPLTATQASKLGILDSFDVDLNPAQQMAAMVQWHRETVGMAALYEIPHQMTQTPQNDPAKSPF 96
            ++SFHPKLKVDLGRGPGKGLGPRLFVGLASAAPLPLTA QA+K+GI+DSFDVDLNP Q MAA+VQWH+ETVGMAALYEIPHQMTQTP NDPAKSPF
Sbjct: 1095 IRSFHPKLKVDLGRGPGKGLGPRLFVGLASAAPLPLTAAQAAKVGIVDSFDVDLNPVQ-MAAIVQWHKETVGMAALYEIPHQMTQTPLNDPAKSPF 1189          
BLAST of mRNA_H-canaliculatus_F_contig10724.691.1 vs. uniprot
Match: A0A2S1PRV6_FUCSE (Putative dicer (Fragment) n=1 Tax=Fucus serratus TaxID=87148 RepID=A0A2S1PRV6_FUCSE)

HSP 1 Score: 152 bits (384), Expect = 7.510e-41
Identity = 73/94 (77.66%), Postives = 86/94 (91.49%), Query Frame = 0
Query:    3 SFHPKLKVDLGRGPGKGLGPRLFVGLASAAPLPLTATQASKLGILDSFDVDLNPAQQMAAMVQWHRETVGMAALYEIPHQMTQTPQNDPAKSPF 96
            +F+PKL VD+G+GPGKGLGPRL+VGLASAAPLPLTATQA K+GI DSFDVDLNPAQ +A++VQWHRET+GM ALY+IPHQ+T+TPQ DP K PF
Sbjct:  448 TFNPKLGVDVGQGPGKGLGPRLYVGLASAAPLPLTATQADKVGIEDSFDVDLNPAQ-LASIVQWHRETLGMVALYKIPHQLTRTPQMDPEKCPF 540          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10724.691.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FZW2_ECTSI6.170e-4989.58Dicer-like 3 n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5KQM7_9PHAE1.580e-4888.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2S1PRV6_FUCSE7.510e-4177.66Putative dicer (Fragment) n=1 Tax=Fucus serratus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10724contigH-canaliculatus_F_contig10724:3001..3689 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10724.691.1mRNA_H-canaliculatus_F_contig10724.691.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig10724 3001..3698 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig10724.691.1 ID=prot_H-canaliculatus_F_contig10724.691.1|Name=mRNA_H-canaliculatus_F_contig10724.691.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=96bp
MQSFHPKLKVDLGRGPGKGLGPRLFVGLASAAPLPLTATQASKLGILDSF
DVDLNPAQQMAAMVQWHRETVGMAALYEIPHQMTQTPQNDPAKSPF
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