mRNA_H-canaliculatus_F_contig10659.634.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig10659.634.1 vs. uniprot
Match: D7FTT1_ECTSI (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTT1_ECTSI) HSP 1 Score: 322 bits (826), Expect = 9.270e-102 Identity = 162/182 (89.01%), Postives = 177/182 (97.25%), Query Frame = 1 Query: 1 MTPYMTGADVANVCATAGRIAARAGSDAVELEHFSAAVDRVQHGLEKPDKEVPQEDKERTAIHEAGHAVAAWMLPWCDEVVKVSIVWRGNALGFSQTAMVERQSQMREMVLDNVCMTLAGRAAEEVVCGTISGGASSDLRVASRQLYSAITEVGFGSSTGLLSPGNRPLSESVMAKIDEEVQ 546 MTPYMTGADVANVCATAGRIAAR+GSDAVELEHFSAAVDRVQHGLEKPD+EV +++K+RTAIHEAGHAVA WMLPWCDEVVKVSIVWRGNALGFSQTA+VERQS+MREMVLD+VCMTLAGRAAEEV+CGTISGGASSDLR+ASRQLYSAITEVGFGS+TGLLSPG+R LSE VM +ID+EVQ Sbjct: 683 MTPYMTGADVANVCATAGRIAARSGSDAVELEHFSAAVDRVQHGLEKPDREVTEDEKKRTAIHEAGHAVAGWMLPWCDEVVKVSIVWRGNALGFSQTAVVERQSEMREMVLDSVCMTLAGRAAEEVLCGTISGGASSDLRMASRQLYSAITEVGFGSTTGLLSPGHRQLSEKVMGEIDQEVQ 864
BLAST of mRNA_H-canaliculatus_F_contig10659.634.1 vs. uniprot
Match: A0A315ZI97_9BACT (ATP-dependent zinc metalloprotease FtsH n=1 Tax=Sediminitomix flava TaxID=379075 RepID=A0A315ZI97_9BACT) HSP 1 Score: 150 bits (379), Expect = 4.930e-39 Identity = 94/190 (49.47%), Postives = 118/190 (62.11%), Query Frame = 1 Query: 4 TPYMTGADVANVCATAGRIAARAGSDAVELEHFSAAVDRVQHGLEKPDKEVPQEDKERTAIHEAGHAVAAWMLPWCDEVVKVSIVWRG-NALGFSQTAMVERQSQMREMVLDNVCMTLAGRAAEEVVCGTISGGASSDLRVASRQLYSAITEVGFGSSTGLLS---P-----GNRPLSESVMAKIDEEVQ 546 TP GA++ANVC A IAAR +AVE+E F AA+DRV GLEK +K + ++K+ A HEAGHAVA W L D +VKVSIV RG ALG++Q E+ E +LD +CMTL GRAAEE+V G IS GA SDL ++ YS I+ G G +S P G+RP SE+ KIDEEV+ Sbjct: 399 TPGFAGAEIANVCNEAALIAARKEKNAVEMEDFQAAIDRVIGGLEKKNKIISPDEKKIVAYHEAGHAVAGWFLEHADPLVKVSIVPRGVAALGYAQYLPKEQFLHTTEQMLDEICMTLGGRAAEEIVFGKISTGALSDLERTTKMAYSMISIYGMNKEIGHVSFYDPNRSEFGSRPYSEATAEKIDEEVK 588
BLAST of mRNA_H-canaliculatus_F_contig10659.634.1 vs. uniprot
Match: A0A327VNT2_9BACT (ATP-dependent zinc metalloprotease FtsH n=3 Tax=Chitinophaga TaxID=79328 RepID=A0A327VNT2_9BACT) HSP 1 Score: 146 bits (368), Expect = 1.630e-37 Identity = 89/191 (46.60%), Postives = 116/191 (60.73%), Query Frame = 1 Query: 1 MTPYMTGADVANVCATAGRIAARAGSDAVELEHFSAAVDRVQHGLEKPDKEVPQEDKERTAIHEAGHAVAAWMLPWCDEVVKVSIVWRG-NALGFSQTAMVERQSQMREMVLDNVCMTLAGRAAEEVVCGTISGGASSDLRVASRQLYSAITEVGFGSSTGLLS---PGN-----RPLSESVMAKIDEEVQ 546 MTP GAD+ANVC A IAAR G VE++ F+ AVDRV GLEK +K + E+KE A HEAGHA+ W L + +VKV+IV RG ALG++Q E+ E ++D++CMTL GRA EE+V G IS GA +DL+V +R Y+ +T G G +S P N +P SE IDEEV+ Sbjct: 404 MTPGFAGADIANVCNEAALIAARKGKTEVEMDDFNDAVDRVIGGLEKKNKIISPEEKEVIAYHEAGHAICGWYLEHANPLVKVTIVPRGVAALGYAQYLPKEQYLYNTEQLMDDICMTLGGRAVEEIVFGKISTGAQNDLQVITRMAYAMVTVYGMNDKVGNVSFYDPNNDQSFTKPYSEETAKLIDEEVR 594
BLAST of mRNA_H-canaliculatus_F_contig10659.634.1 vs. uniprot
Match: A0A2G8K6N9_STIJA (Putative AFG3-like protein 2 n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8K6N9_STIJA) HSP 1 Score: 138 bits (348), Expect = 2.620e-37 Identity = 79/191 (41.36%), Postives = 114/191 (59.69%), Query Frame = 1 Query: 1 MTPYMTGADVANVCATAGRIAARAGSDAVELEHFSAAVDRVQHGLEKPDKEVPQEDKERTAIHEAGHAVAAWMLPWCDEVVKVSIVWRGNALGFSQTAMVERQSQMREMVLDNVCMTLAGRAAEEVVCGTISGGASSDLRVASRQLYSAITEVGFGSSTGLLS-----PGN----RPLSESVMAKIDEEVQ 546 ++P TGADVANVC A IAAR G +++E HF A++RV GLEK + + E+K+ A HEAGHAVA W L + D ++KVSI+ RG LG++Q E+ +E +LD +CMTL GRA+E++ G ++ GA DL+ ++ Y+ I + G G +S G+ +P SE IDEE + Sbjct: 8 LSPGFTGADVANVCNEAALIAARYGLNSIEQTHFEQAIERVVGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWFLEFADPLLKVSIIPRGKGLGYAQYLPREQFLYTKEQLLDRMCMTLGGRASEQIFFGRVTTGAQDDLKKVTQMAYAQIVQYGMSDKVGNVSFDMPQQGDMVLEKPYSEETARLIDEEAR 198
BLAST of mRNA_H-canaliculatus_F_contig10659.634.1 vs. uniprot
Match: A0A327QQ63_9BACT (ATP-dependent zinc metalloprotease FtsH n=1 Tax=Chitinophaga skermanii TaxID=331697 RepID=A0A327QQ63_9BACT) HSP 1 Score: 145 bits (366), Expect = 3.170e-37 Identity = 89/190 (46.84%), Postives = 115/190 (60.53%), Query Frame = 1 Query: 4 TPYMTGADVANVCATAGRIAARAGSDAVELEHFSAAVDRVQHGLEKPDKEVPQEDKERTAIHEAGHAVAAWMLPWCDEVVKVSIVWRG-NALGFSQTAMVERQSQMREMVLDNVCMTLAGRAAEEVVCGTISGGASSDLRVASRQLYSAITEVGFGSSTGLLS---PGN-----RPLSESVMAKIDEEVQ 546 TP GAD+ANVC A IAAR G VE+E F+ AVDRV GLEK +K + E+KE A HEAGHA+ W L + +VKV+IV RG ALG++Q E+ E ++D++CMTL GRA EE+V G IS GA +DL+V +R Y+ +T G G +S P N +P SE IDEEV+ Sbjct: 408 TPGFAGADIANVCNEAALIAARKGKSQVEMEDFNDAVDRVIGGLEKKNKIISPEEKEVIAYHEAGHAICGWYLEHANPLVKVTIVPRGVAALGYAQYLPKEQYLYNTEQLMDDICMTLGGRAVEELVFGKISTGAQNDLQVITRMAYAMVTVYGMNEKVGNVSFYDPNNDQAFTKPYSEETAKMIDEEVR 597
BLAST of mRNA_H-canaliculatus_F_contig10659.634.1 vs. uniprot
Match: A0A7S2Z3U7_9CHLO (Hypothetical protein n=1 Tax=Chloropicon laureae TaxID=464258 RepID=A0A7S2Z3U7_9CHLO) HSP 1 Score: 142 bits (358), Expect = 4.170e-37 Identity = 84/189 (44.44%), Postives = 112/189 (59.26%), Query Frame = 1 Query: 1 MTPYMTGADVANVCATAGRIAARAGSDAVELEHFSAAVDRVQHGLEKPDKEVPQEDKERTAIHEAGHAVAAWMLPWCDEVVKVSIVWRGNA-LGFSQTAMVERQSQMREMVLDNVCMTLAGRAAEEVVCGTISGGASSDLRVASRQLYSAITEVGFGSSTGLLS------PGNRPLSESVMAKIDEEVQ 546 +TP GAD+ANVC A IAAR D V++ F A+DRV GLEK +K + +E++ A HEAGHAV W L + + ++KVSIV RG A LGF+Q E +E + D +CMTL GRAAEEV+ G IS GA +DL +R YS ++ G S GL+S +P S+ ID+EV+ Sbjct: 160 LTPGFAGADIANVCNEAALIAARQSKDFVQMIDFEGAIDRVIGGLEKKNKVISKEERRTVAYHEAGHAVVGWFLEFAEPLLKVSIVPRGTAALGFAQYLPNENLLMTKEQIRDMICMTLGGRAAEEVMIGKISTGAQNDLEKITRMAYSQVSLYGMSESVGLVSFRSDNETFQKPYSDETAQLIDQEVR 348
BLAST of mRNA_H-canaliculatus_F_contig10659.634.1 vs. uniprot
Match: A0A1M7JX74_9BACT (ATP-dependent zinc metalloprotease FtsH n=15 Tax=Chitinophaga TaxID=79328 RepID=A0A1M7JX74_9BACT) HSP 1 Score: 145 bits (365), Expect = 4.200e-37 Identity = 88/191 (46.07%), Postives = 116/191 (60.73%), Query Frame = 1 Query: 1 MTPYMTGADVANVCATAGRIAARAGSDAVELEHFSAAVDRVQHGLEKPDKEVPQEDKERTAIHEAGHAVAAWMLPWCDEVVKVSIVWRG-NALGFSQTAMVERQSQMREMVLDNVCMTLAGRAAEEVVCGTISGGASSDLRVASRQLYSAITEVGFGSSTGLLS---PGN-----RPLSESVMAKIDEEVQ 546 MTP GAD+ANVC A IAAR G VE+E F+ AVDRV GLEK +K + E+KE A HEAGHA+ W L + +VKV+IV RG ALG++Q E+ E +LD++CMTL GRA E++V G +S GA +DL+V +R Y+ +T G G +S P + +P SE IDEEV+ Sbjct: 402 MTPGFAGADIANVCNEAALIAARKGKTEVEMEDFNDAVDRVIGGLEKKNKIISPEEKEVIAYHEAGHAICGWYLEHANPLVKVTIVPRGVAALGYAQYLPKEQYLYNTEQLLDDICMTLGGRAVEDIVFGKVSTGAQNDLQVITRMAYAMVTVYGMNDKVGNVSFYDPNSDQAFTKPYSEETAKMIDEEVR 592
BLAST of mRNA_H-canaliculatus_F_contig10659.634.1 vs. uniprot
Match: A0A2P8GMR2_9BACT (ATP-dependent zinc metalloprotease FtsH n=10 Tax=Chitinophaga TaxID=79328 RepID=A0A2P8GMR2_9BACT) HSP 1 Score: 145 bits (365), Expect = 4.250e-37 Identity = 88/191 (46.07%), Postives = 116/191 (60.73%), Query Frame = 1 Query: 1 MTPYMTGADVANVCATAGRIAARAGSDAVELEHFSAAVDRVQHGLEKPDKEVPQEDKERTAIHEAGHAVAAWMLPWCDEVVKVSIVWRG-NALGFSQTAMVERQSQMREMVLDNVCMTLAGRAAEEVVCGTISGGASSDLRVASRQLYSAITEVGFGSSTGLLS---PGN-----RPLSESVMAKIDEEVQ 546 MTP GAD+ANVC A IAAR G VE+E F+ AVDRV GLEK +K + E+KE A HEAGHA+ W L + +VKV+IV RG ALG++Q E+ E +LD++CMTL GRA E++V G +S GA +DL+V +R Y+ +T G G +S P + +P SE IDEEV+ Sbjct: 402 MTPGFAGADIANVCNEAALIAARKGKTEVEMEDFNDAVDRVIGGLEKKNKIISPEEKEVIAYHEAGHAICGWYLEHANPLVKVTIVPRGVAALGYAQYLPKEQYLYNTEQLLDDICMTLGGRAVEDIVFGKVSTGAQNDLQVITRMAYAMVTVYGMNDKVGNVSFYDPNSDQAFTKPYSEETAKMIDEEVR 592
BLAST of mRNA_H-canaliculatus_F_contig10659.634.1 vs. uniprot
Match: A0A2T7BM89_9BACT (ATP-dependent zinc metalloprotease FtsH n=3 Tax=Chitinophaga TaxID=79328 RepID=A0A2T7BM89_9BACT) HSP 1 Score: 145 bits (365), Expect = 4.290e-37 Identity = 88/191 (46.07%), Postives = 117/191 (61.26%), Query Frame = 1 Query: 1 MTPYMTGADVANVCATAGRIAARAGSDAVELEHFSAAVDRVQHGLEKPDKEVPQEDKERTAIHEAGHAVAAWMLPWCDEVVKVSIVWRG-NALGFSQTAMVERQSQMREMVLDNVCMTLAGRAAEEVVCGTISGGASSDLRVASRQLYSAITEVGFGSSTGLLS---PGN-----RPLSESVMAKIDEEVQ 546 MTP GAD+ANVC A IAAR G + VE+E F+ A+DRV GLEK +K + E+KE A HEAGHA+ W L + +VKV+IV RG ALG++Q E+ E +LD++CMTL GRA EE+V G IS GA +DL+V +R Y+ ++ G G +S P N +P S+ IDEEV+ Sbjct: 405 MTPGFAGADIANVCNEAALIAARKGKNQVEMEDFNDAIDRVIGGLEKKNKIISPEEKEVIAYHEAGHAICGWHLEHANPLVKVTIVPRGVAALGYAQYLPKEQYLYNTEQLLDDICMTLGGRAVEELVFGKISTGAQNDLQVITRMAYAMVSVYGMNDKVGNVSFYDPNNDQAFTKPYSDETARMIDEEVR 595
BLAST of mRNA_H-canaliculatus_F_contig10659.634.1 vs. uniprot
Match: A0A2V3IMR0_9FLOR (AFG3-like protein 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMR0_9FLOR) HSP 1 Score: 145 bits (366), Expect = 4.730e-37 Identity = 87/192 (45.31%), Postives = 117/192 (60.94%), Query Frame = 1 Query: 4 TPYMTGADVANVCATAGRIAARAGSDAVELEHFSAAVDRVQHGLEKPDKEVPQEDKERTAIHEAGHAVAAWMLPWCDEVVKVSIVWRGNA-LGFSQTAMVERQSQMREMVLDNVCMTLAGRAAEEVVCGTISGGASSDLRVASRQLYSAITEVGFGSSTGLLSPGN----------RPLSESVMAKIDEEVQ 546 TP GAD+ANVC A IAAR DAVE E F AA+DRV GLEK + + E+K A HEAGHAV+ W L ++KVSI+ RG+A LG++Q +ER +E + D +CMTLAGRAAEE+ T++ GAS D +R Y +++E G GS+ G L+ N RP S+ + ++DEEV+ Sbjct: 530 TPGFAGADIANVCNEAALIAARTKKDAVEPEDFEAAIDRVIGGLEKKNLVMSPEEKRTVAYHEAGHAVSGWFLEHAMPLLKVSIIPRGSAALGYAQYQPLERYLISKEALCDQMCMTLAGRAAEEIFFSTVTTGASDDFNKVTRMAYQSVSEWGLGSTIGNLAFPNSNDPEETGFYRPYSDRIARQLDEEVR 721 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10659.634.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10659.634.1 >prot_H-canaliculatus_F_contig10659.634.1 ID=prot_H-canaliculatus_F_contig10659.634.1|Name=mRNA_H-canaliculatus_F_contig10659.634.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=182bp MTPYMTGADVANVCATAGRIAARAGSDAVELEHFSAAVDRVQHGLEKPDKback to top mRNA from alignment at H-canaliculatus_F_contig10659:1700..4543+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig10659.634.1 ID=mRNA_H-canaliculatus_F_contig10659.634.1|Name=mRNA_H-canaliculatus_F_contig10659.634.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2844bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10659:1700..4543+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10659:1700..4543+ >mRNA_H-canaliculatus_F_contig10659.634.1 ID=mRNA_H-canaliculatus_F_contig10659.634.1|Name=mRNA_H-canaliculatus_F_contig10659.634.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1092bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10659:1700..4543+ (Hapterophycus canaliculatus Oshoro5f female)back to top |