mRNA_H-canaliculatus_F_contig10653.633.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig10653.633.1 vs. uniprot
Match: A0A6H5KJ55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ55_9PHAE) HSP 1 Score: 196 bits (498), Expect = 2.180e-55 Identity = 107/191 (56.02%), Postives = 117/191 (61.26%), Query Frame = 1 Query: 1 WLRATLASGFRVRGLSINPGTPGFPYVFHPHRSMEVRGKQPPYIAVAGDCSQSAYIFRPVAPPPAEE-----------EAKGSWEQEAAPLSYEIACSIEVPGTVGSLA-------------------------------------------DEDDLWSTQQQQRTRGDGWAKLFVPNYDGNKVYVFSMEP 411 WLRATLASGFRVRG+SINPGTPGFPY+FHPHRSME GKQPPYIA+AGDCSQSAYI RP PA E KG+WEQEAAPL YEIAC+IEVPGTVGSLA E+ + + Q QR DGWAKLFVPNYDGNK+Y+FSMEP Sbjct: 1028 WLRATLASGFRVRGISINPGTPGFPYLFHPHRSME--GKQPPYIAIAGDCSQSAYILRPA---PAASGSAGTAAGGGPETKGAWEQEAAPLGYEIACAIEVPGTVGSLAVSYGQLLGEDGTMEGFDTAEPPSPPHPPVASPEVFLEGAGRRRREEGVRPSPQPQRRGADGWAKLFVPNYDGNKIYIFSMEP 1213
BLAST of mRNA_H-canaliculatus_F_contig10653.633.1 vs. uniprot
Match: A0A4D9DCX2_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DCX2_9STRA) HSP 1 Score: 124 bits (312), Expect = 2.410e-30 Identity = 70/150 (46.67%), Postives = 86/150 (57.33%), Query Frame = 1 Query: 1 WLRATLASGFRVRGLS-INPGTPGFPYVFHPHRSMEVRGKQPPYIAVAGDCSQSAYIFRPVAPPPAEEEAKGSWEQEAAPLSYEIACSIEVPGTVGSLA--------DEDDLWSTQQQQRTRGDGWAKLFVPNYDGNKVYVFSMEPEAHS 423 W R+TLA+GF V+ INPG PGFPYVF+PHRS+ + Q PYI +AGDCS +AYI+RPV + G E E + YE I GTVGSLA E + W DGWAK+F+PN+D +KVY FS PE S Sbjct: 812 WKRSTLATGFHVKNWGQINPGAPGFPYVFYPHRSLRGQPGQRPYILLAGDCSHAAYIYRPVL----GRDGGGGDEAE---VQYEPMAQINCGGTVGSLAVGHLPLAVGESEEWEEDD------DGWAKIFIPNFDTDKVYTFSFGPEKVS 948
BLAST of mRNA_H-canaliculatus_F_contig10653.633.1 vs. uniprot
Match: A0A836CJ47_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ47_9STRA) HSP 1 Score: 117 bits (292), Expect = 3.770e-28 Identity = 68/145 (46.90%), Postives = 81/145 (55.86%), Query Frame = 1 Query: 1 WLRATLASGFRVRGLSINPGTPGFPYVFHP-HRSMEVR--GKQPPYIAVAGDCSQSAYIFRPVAPPPAEEEAKGSWEQEAAPLSYEIACSIEVPGTVGSLADEDDLWSTQQQQRTRGDGWAKLFVPNYDGNKVYVFSMEPEAHSR 426 W R T+ASGFRV+GL INPG PGF Y+FHP HR+ E G +P YIA+AGDCSQ+AY+ RP L YE+ C I+ GTVGSLA DG AKLFVPNYD KVY+F + +R Sbjct: 264 WKRTTIASGFRVKGLGINPGAPGFSYIFHPNHRAGEPAPPGARP-YIALAGDCSQAAYVLRPC----------------GVGLDYELVCRIDCEGTVGSLAVSHGPLCGGGD-----DGCAKLFVPNYDQGKVYIFGLGETQQTR 386
BLAST of mRNA_H-canaliculatus_F_contig10653.633.1 vs. uniprot
Match: A0A7S4CRI4_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CRI4_9EUGL) HSP 1 Score: 110 bits (275), Expect = 5.580e-26 Identity = 60/132 (45.45%), Postives = 77/132 (58.33%), Query Frame = 1 Query: 1 WLRATLASGFRVRGLSINPGTPGFPYVFHPHRSMEVRGKQPPYIAVAGDCSQSAYIFRPVAPPPAEEEAKGSWEQEAAPLSYEIACSIEVPGTVGSLADEDDLWSTQQQQRTRGDGWAKLFVPNYDGNKVYV 396 W R TLASGF+V+ LSINPG PGF Y FHPH M+ +G PP+I +AGDCS +AY++RP E L Y++ +I V GTVGS+A + DGWAK FVP Y+ ++VYV Sbjct: 290 WKRTTLASGFKVKRLSINPGAPGFVYPFHPHVKMKEQGA-PPHILLAGDCSDAAYVYRPTFSDEGE-------------LQYDLMATIGVDGTVGSIAV-----GYTSTPGSPDDGWAKFFVPVYEKDRVYV 402
BLAST of mRNA_H-canaliculatus_F_contig10653.633.1 vs. uniprot
Match: A0A1Z5K689_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K689_FISSO) HSP 1 Score: 107 bits (268), Expect = 1.470e-24 Identity = 58/139 (41.73%), Postives = 91/139 (65.47%), Query Frame = 1 Query: 1 WLRATLASGFRVRGL---SINPGTPGFPYVFHPHRSMEVRGKQPPYIAVAGDCSQSAYIFRPVAPPPAEEEAKGSWEQEAAPLSYEIACSIEVPGTVGSLA-DEDDLWSTQQQQRTRGDGWAKLFVPNYDGNKVYVFSM 405 W+R T+A+GF+V+G +NPG PGF Y FH H+ + RGK+ P IAVAGDC++SA++FRP +E + +E++P SY++ IE TVGS+A DD S+ Q G+AKL++P+++ +K++VF++ Sbjct: 405 WVRTTVATGFKVKGKLGNMVNPGAPGFVYTFHAHK--DDRGKKRPLIAVAGDCAESAFVFRP-------DETLATDNEESSP-SYKLMMEIECGATVGSIAIGYDDFTSSPQDT-----GYAKLYIPSFEKDKIHVFAL 528
BLAST of mRNA_H-canaliculatus_F_contig10653.633.1 vs. uniprot
Match: A0A448ZHS7_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZHS7_9STRA) HSP 1 Score: 106 bits (265), Expect = 5.180e-24 Identity = 60/139 (43.17%), Postives = 87/139 (62.59%), Query Frame = 1 Query: 1 WLRATLASGFRVRGL---SINPGTPGFPYVFHPHRSMEVRGKQPPYIAVAGDCSQSAYIFRPVAPPPAEEEAKGSWEQEAAPLSYEIACSIEVPGTVGSLA-DEDDLWSTQQQQRTRGDGWAKLFVPNYDGNKVYVFSM 405 W+R T+ASGF+V+ INPG PGF Y FH HR RGK+P IAVAGDC++SAYIFRP ++ A+G+ + Y++ C I+ TVGS+A DL S +Q+ G+AK+++P ++ +KV VF++ Sbjct: 1011 WVRTTIASGFQVKQQIWNMINPGAPGFAYAFHAHRDDAARGKRP-MIAVAGDCAESAYIFRP------QQAAEGAGTTDPH-AEYKLMCEIKCGATVGSIAVGYGDLCSAEQES-----GYAKIYIPCFEKDKVLVFAL 1136
BLAST of mRNA_H-canaliculatus_F_contig10653.633.1 vs. uniprot
Match: A0A7R9ZQ01_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZQ01_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 1.570e-23 Identity = 58/141 (41.13%), Postives = 83/141 (58.87%), Query Frame = 1 Query: 1 WLRATLASGFRVRGLS---INPGTPGFPYVFHPHRSMEVRGKQP--PYIAVAGDCSQSAYIFRPVAPPPAEEEAKGSWEQEAAPLSYEIACSIEVPGTVGSLA-DEDDLWSTQQQQRTRGDGWAKLFVPNYDGNKVYVFSM 405 W+R T+A+GF+V G INPG PGF Y FH + + KQ P IAVAGDC++SAY+FRP + +GS AA Y++ C I+ TVGS+ +DL +Q+ G+AKL++P Y+ +K+ VF+M Sbjct: 2 WIRTTVATGFKVDGQLWNIINPGAPGFVYTFHARKQDAQQRKQTQRPMIAVAGDCAESAYVFRPERH---ASDGEGSTFDRAA--QYKLMCEIKCGATVGSIGIGYEDLCDVEQES-----GYAKLYIPCYEKDKILVFAM 132
BLAST of mRNA_H-canaliculatus_F_contig10653.633.1 vs. uniprot
Match: A0A7S1TPM8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TPM8_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 2.350e-21 Identity = 63/166 (37.95%), Postives = 83/166 (50.00%), Query Frame = 1 Query: 4 LRATLASGFRVRGLSINPGTPGFPYVFHPHR--SMEVRGKQ----PPYIAVAGDCSQSAYIFRPVAPPPAEEEAKGSWEQEAAPLSYEIACSIEVPGTVGSLAD--------------------------EDDLWSTQQQQRTRGDGWAKLFVPNYDGNKVYVFSM 405 LR +ASGFRVRGLSINPG PGF Y F+P R EV G Q PY+ +AGDC+Q+AY+ +P E G+ + Y++ IEV G VGSLA E + + + D WA++ VPNYDG++V+VF M Sbjct: 474 LRHIVASGFRVRGLSINPGAPGFVYAFYPRRRHDPEVSGAQGGDAKPYLLLAGDCAQAAYVLKP-------REGGGADD-------YDVQGVIEVNGAVGSLAVCYGSRIENALKGFPDARSGSSAWEEVESEAGAPCEDDADEEDDWARILVPNYDGDEVHVFKM 625
BLAST of mRNA_H-canaliculatus_F_contig10653.633.1 vs. uniprot
Match: A0A1E7FEZ6_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FEZ6_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 2.450e-21 Identity = 58/147 (39.46%), Postives = 85/147 (57.82%), Query Frame = 1 Query: 1 WLRATLASGFRVRGLS---INPGTPGFPYVFHPHRSMEVRGKQPPYIAVAGDCSQSAYIFRPVAP--------PPAEEEAKGSWEQEAAPLSYEIACSIEVPGTVGSLA-DEDDLWSTQQQQRTRGDGWAKLFVPNYDGNKVYVFSM 405 W+R T+A+GF+V+ INPG PGF Y FH + E +GK+P IAVAGDC++SAYIFRP EE + Q Y++ C I+ TVGS+A DDL S +Q+ G+AK+++P ++ +K+ VF++ Sbjct: 610 WIRTTIATGFQVKQQIWNVINPGAPGFAYAFHARKDDESQGKRP-MIAVAGDCAESAYIFRPQESLVEGVELNTRKEEGGECDTLQSDLQAEYKLMCEIKCGATVGSIAVGYDDLCSAEQES-----GYAKIYIPCFEKDKILVFAL 750
BLAST of mRNA_H-canaliculatus_F_contig10653.633.1 vs. uniprot
Match: A0A7S2LY49_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LY49_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 4.680e-21 Identity = 57/142 (40.14%), Postives = 85/142 (59.86%), Query Frame = 1 Query: 1 WLRATLASGFRVRG-LS--INPGTPGFPYVFHPHRSMEVRGKQP---PYIAVAGDCSQSAYIFRPVAPPPAEEEAKGSWEQEAAPLSYEIACSIEVPGTVGSLA-DEDDLWSTQQQQRTRGDGWAKLFVPNYDGNKVYVFSM 405 W R+ +A+GF+V+G LS INPG PGF Y F P R + + P I ++GDC++SAYI RP+ EE+ E + Y + C I+ TVGSLA DD ++T +Q++ G+AK++VP Y+ +KV VF++ Sbjct: 43 WTRSVIATGFKVQGQLSNMINPGAPGFVYSFFPTREGGIGSDKKWHRPLIGLSGDCAESAYILRPI-----EEDTIEVGEDRS--TKYALMCEIKCSSTVGSLAVGYDDFYTTVAEQQS---GYAKIYVPCYEQDKVLVFAL 174 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10653.633.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10653.633.1 >prot_H-canaliculatus_F_contig10653.633.1 ID=prot_H-canaliculatus_F_contig10653.633.1|Name=mRNA_H-canaliculatus_F_contig10653.633.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=143bp WLRATLASGFRVRGLSINPGTPGFPYVFHPHRSMEVRGKQPPYIAVAGDCback to top mRNA from alignment at H-canaliculatus_F_contig10653:3342..4593- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig10653.633.1 ID=mRNA_H-canaliculatus_F_contig10653.633.1|Name=mRNA_H-canaliculatus_F_contig10653.633.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1252bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10653:3342..4593- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10653:3342..4593- >mRNA_H-canaliculatus_F_contig10653.633.1 ID=mRNA_H-canaliculatus_F_contig10653.633.1|Name=mRNA_H-canaliculatus_F_contig10653.633.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=858bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10653:3342..4593- (Hapterophycus canaliculatus Oshoro5f female)back to top |